Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027630 | XP_003623840.1 | 80.315 | 254 | 9 | 2 | 25 | 237 | 1 | 254 | 7.07e-130 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027630 | A2Q5C9 | 80.315 | 254 | 9 | 2 | 25 | 237 | 1 | 254 | 3.38e-130 | 389 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa1027630 | -0.823624 | 1.252790e-53 | -8.615850e-47 |
| Msa0017510 | Msa1027630 | 0.813340 | 2.689264e-51 | -8.615850e-47 |
| Msa0022310 | Msa1027630 | 0.803136 | 4.026106e-49 | -8.615850e-47 |
| Msa0027390 | Msa1027630 | 0.811443 | 6.982345e-51 | -8.615850e-47 |
| Msa0031340 | Msa1027630 | 0.806388 | 8.428596e-50 | -8.615850e-47 |
| Msa0033440 | Msa1027630 | 0.803982 | 2.688393e-49 | -8.615850e-47 |
| Msa0046100 | Msa1027630 | 0.814259 | 1.687561e-51 | -8.615850e-47 |
| Msa0047050 | Msa1027630 | 0.807661 | 4.533128e-50 | -8.615850e-47 |
| Msa0048000 | Msa1027630 | 0.809795 | 1.585552e-50 | -8.615850e-47 |
| Msa0101810 | Msa1027630 | -0.847219 | 1.328333e-59 | -8.615850e-47 |
| Msa0110970 | Msa1027630 | 0.802818 | 4.683467e-49 | -8.615850e-47 |
| Msa0113970 | Msa1027630 | 0.806777 | 6.974811e-50 | -8.615850e-47 |
| Msa0647130 | Msa1027630 | 0.816243 | 6.114796e-52 | -8.615850e-47 |
| Msa0648520 | Msa1027630 | 0.830509 | 2.821696e-55 | -8.615850e-47 |
| Msa0648880 | Msa1027630 | 0.803497 | 3.389339e-49 | -8.615850e-47 |
| Msa0658570 | Msa1027630 | 0.820753 | 5.807843e-53 | -8.615850e-47 |
| Msa0682330 | Msa1027630 | 0.810020 | 1.418431e-50 | -8.615850e-47 |
| Msa0682550 | Msa1027630 | 0.827236 | 1.749366e-54 | -8.615850e-47 |
| Msa0691050 | Msa1027630 | 0.846169 | 2.571365e-59 | -8.615850e-47 |
| Msa0692230 | Msa1027630 | 0.805933 | 1.050767e-49 | -8.615850e-47 |
| Msa0693380 | Msa1027630 | 0.835200 | 1.926901e-56 | -8.615850e-47 |
| Msa0702350 | Msa1027630 | 0.800506 | 1.395638e-48 | -8.615850e-47 |
| Msa0702570 | Msa1027630 | 0.805100 | 1.571046e-49 | -8.615850e-47 |
| Msa0702680 | Msa1027630 | 0.801227 | 9.948028e-49 | -8.615850e-47 |
| Msa0703490 | Msa1027630 | 0.801898 | 7.245255e-49 | -8.615850e-47 |
| Msa0722720 | Msa1027630 | 0.809761 | 1.612518e-50 | -8.615850e-47 |
| Msa0723990 | Msa1027630 | 0.808965 | 2.389649e-50 | -8.615850e-47 |
| Msa0735170 | Msa1027630 | 0.809527 | 1.810524e-50 | -8.615850e-47 |
| Msa0737570 | Msa1027630 | 0.812195 | 4.789852e-51 | -8.615850e-47 |
| Msa0743680 | Msa1027630 | 0.800561 | 1.360342e-48 | -8.615850e-47 |
| Msa0744040 | Msa1027630 | 0.821968 | 3.045556e-53 | -8.615850e-47 |
| Msa0754720 | Msa1027630 | -0.804064 | 2.584554e-49 | -8.615850e-47 |
| Msa0756630 | Msa1027630 | -0.830160 | 3.433677e-55 | -8.615850e-47 |
| Msa0802470 | Msa1027630 | -0.820355 | 7.167765e-53 | -8.615850e-47 |
| Msa0804680 | Msa1027630 | 0.821989 | 3.011158e-53 | -8.615850e-47 |
| Msa0810220 | Msa1027630 | 0.803487 | 3.404638e-49 | -8.615850e-47 |
| Msa0816710 | Msa1027630 | 0.801912 | 7.196063e-49 | -8.615850e-47 |
| Msa0824660 | Msa1027630 | 0.841593 | 4.325680e-58 | -8.615850e-47 |
| Msa0825340 | Msa1027630 | 0.813757 | 2.177762e-51 | -8.615850e-47 |
| Msa0828560 | Msa1027630 | 0.803373 | 3.595482e-49 | -8.615850e-47 |
| Msa0829620 | Msa1027630 | 0.826486 | 2.642804e-54 | -8.615850e-47 |
| Msa0123100 | Msa1027630 | 0.806005 | 1.015004e-49 | -8.615850e-47 |
| Msa0146260 | Msa1027630 | 0.802329 | 5.907248e-49 | -8.615850e-47 |
| Msa0152430 | Msa1027630 | 0.806921 | 6.504698e-50 | -8.615850e-47 |
| Msa0157290 | Msa1027630 | 0.813458 | 2.533585e-51 | -8.615850e-47 |
| Msa0160010 | Msa1027630 | 0.805069 | 1.594488e-49 | -8.615850e-47 |
| Msa0165300 | Msa1027630 | 0.802280 | 6.046389e-49 | -8.615850e-47 |
| Msa0170140 | Msa1027630 | 0.810608 | 1.059273e-50 | -8.615850e-47 |
| Msa0191250 | Msa1027630 | 0.824874 | 6.371388e-54 | -8.615850e-47 |
| Msa0210450 | Msa1027630 | 0.803937 | 2.746764e-49 | -8.615850e-47 |
| Msa0213520 | Msa1027630 | 0.815696 | 8.099190e-52 | -8.615850e-47 |
| Msa0215320 | Msa1027630 | -0.806139 | 9.509367e-50 | -8.615850e-47 |
| Msa0217400 | Msa1027630 | 0.834744 | 2.511251e-56 | -8.615850e-47 |
| Msa0221060 | Msa1027630 | 0.804979 | 1.665873e-49 | -8.615850e-47 |
| Msa0223410 | Msa1027630 | -0.815522 | 8.853349e-52 | -8.615850e-47 |
| Msa0230770 | Msa1027630 | 0.806413 | 8.324860e-50 | -8.615850e-47 |
| Msa0366240 | Msa1027630 | 0.802216 | 6.231677e-49 | -8.615850e-47 |
| Msa0376350 | Msa1027630 | 0.800462 | 1.425179e-48 | -8.615850e-47 |
| Msa0376590 | Msa1027630 | 0.826498 | 2.624772e-54 | -8.615850e-47 |
| Msa0388960 | Msa1027630 | 0.826401 | 2.769105e-54 | -8.615850e-47 |
| Msa0389340 | Msa1027630 | 0.820386 | 7.048317e-53 | -8.615850e-47 |
| Msa0410650 | Msa1027630 | 0.812153 | 4.892201e-51 | -8.615850e-47 |
| Msa0414170 | Msa1027630 | 0.809762 | 1.612316e-50 | -8.615850e-47 |
| Msa0419820 | Msa1027630 | 0.804250 | 2.364339e-49 | -8.615850e-47 |
| Msa0422280 | Msa1027630 | 0.813521 | 2.454111e-51 | -8.615850e-47 |
| Msa0436370 | Msa1027630 | 0.828745 | 7.578908e-55 | -8.615850e-47 |
| Msa0448550 | Msa1027630 | -0.833735 | 4.496713e-56 | -8.615850e-47 |
| Msa0466390 | Msa1027630 | 0.828721 | 7.681879e-55 | -8.615850e-47 |
| Msa0467430 | Msa1027630 | 0.805286 | 1.436806e-49 | -8.615850e-47 |
| Msa0468290 | Msa1027630 | 0.803504 | 3.378007e-49 | -8.615850e-47 |
| Msa0468800 | Msa1027630 | 0.806760 | 7.033196e-50 | -8.615850e-47 |
| Msa0470690 | Msa1027630 | 0.806492 | 8.011230e-50 | -8.615850e-47 |
| Msa0473080 | Msa1027630 | 0.801358 | 9.349571e-49 | -8.615850e-47 |
| Msa0989220 | Msa1027630 | 0.805550 | 1.264351e-49 | -8.615850e-47 |
| Msa0990960 | Msa1027630 | 0.802809 | 4.703877e-49 | -8.615850e-47 |
| Msa1014540 | Msa1027630 | 0.808141 | 3.583414e-50 | -8.615850e-47 |
| Msa1019020 | Msa1027630 | 0.800142 | 1.655442e-48 | -8.615850e-47 |
| Msa1027630 | Msa1035300 | 0.815961 | 7.067986e-52 | -8.615850e-47 |
| Msa1027630 | Msa1037650 | -0.823960 | 1.045029e-53 | -8.615850e-47 |
| Msa1027630 | Msa1040120 | 0.823047 | 1.708927e-53 | -8.615850e-47 |
| Msa1027630 | Msa1045200 | 0.819104 | 1.383495e-52 | -8.615850e-47 |
| Msa1027630 | Msa1046300 | 0.800507 | 1.395055e-48 | -8.615850e-47 |
| Msa1027630 | Msa1068200 | -0.813571 | 2.392283e-51 | -8.615850e-47 |
| Msa1027630 | Msa1070010 | 0.803452 | 3.462967e-49 | -8.615850e-47 |
| Msa1027630 | Msa1075220 | -0.819901 | 9.103665e-53 | -8.615850e-47 |
| Msa1027630 | Msa1080160 | 0.811022 | 8.616048e-51 | -8.615850e-47 |
| Msa1027630 | Msa1082500 | 0.843385 | 1.447309e-58 | -8.615850e-47 |
| Msa1027630 | Msa1084260 | 0.820520 | 6.569862e-53 | -8.615850e-47 |
| Msa1027630 | Msa1085200 | 0.814108 | 1.821763e-51 | -8.615850e-47 |
| Msa1027630 | Msa1087980 | 0.808331 | 3.264570e-50 | -8.615850e-47 |
| Msa1027630 | Msa1102770 | 0.815543 | 8.759848e-52 | -8.615850e-47 |
| Msa1027630 | Msa1108160 | 0.802351 | 5.846821e-49 | -8.615850e-47 |
| Msa1027630 | Msa1111110 | 0.820088 | 8.250168e-53 | -8.615850e-47 |
| Msa1027630 | Msa1117170 | 0.803363 | 3.613008e-49 | -8.615850e-47 |
| Msa1027630 | Msa1130270 | -0.817988 | 2.478178e-52 | -8.615850e-47 |
| Msa1027630 | Msa1158310 | 0.815080 | 1.110154e-51 | -8.615850e-47 |
| Msa1027630 | Msa1162550 | -0.809673 | 1.684640e-50 | -8.615850e-47 |
| Msa1027630 | Msa1170280 | 0.839426 | 1.595676e-57 | -8.615850e-47 |
| Msa1027630 | Msa1172670 | 0.822591 | 2.182305e-53 | -8.615850e-47 |
| Msa1027630 | Msa1179940 | 0.819292 | 1.254204e-52 | -8.615850e-47 |
| Msa1027630 | Msa1179970 | 0.819608 | 1.061921e-52 | -8.615850e-47 |
| Msa1027630 | Msa1199830 | -0.804443 | 2.155300e-49 | -8.615850e-47 |
| Msa1027630 | Msa1224830 | 0.803080 | 4.135026e-49 | -8.615850e-47 |
| Msa1027630 | Msa1231240 | 0.800699 | 1.275089e-48 | -8.615850e-47 |
| Msa1027630 | Msa1231550 | 0.811375 | 7.224697e-51 | -8.615850e-47 |
| Msa1027630 | Msa1238470 | 0.837065 | 6.476525e-57 | -8.615850e-47 |
| Msa1027630 | Msa1238930 | 0.809494 | 1.840894e-50 | -8.615850e-47 |
| Msa1027630 | Msa1264020 | 0.803460 | 3.449232e-49 | -8.615850e-47 |
| Msa1027630 | Msa1270610 | 0.809334 | 1.992296e-50 | -8.615850e-47 |
| Msa1027630 | Msa1271300 | 0.803833 | 2.885946e-49 | -8.615850e-47 |
| Msa1027630 | Msa1283860 | 0.803249 | 3.815705e-49 | -8.615850e-47 |
| Msa1027630 | Msa1284260 | 0.819357 | 1.211808e-52 | -8.615850e-47 |
| Msa1027630 | Msa1291660 | 0.815332 | 9.761795e-52 | -8.615850e-47 |
| Msa1027630 | Msa1292770 | 0.809314 | 2.011437e-50 | -8.615850e-47 |
| Msa1027630 | Msa1297290 | 0.810581 | 1.073486e-50 | -8.615850e-47 |
| Msa1027630 | Msa1311960 | 0.816511 | 5.326351e-52 | -8.615850e-47 |
| Msa1027630 | Msa1313150 | 0.829482 | 5.021219e-55 | -8.615850e-47 |
| Msa1027630 | Msa1314340 | 0.808019 | 3.803079e-50 | -8.615850e-47 |
| Msa1027630 | Msa1319650 | 0.809960 | 1.461386e-50 | -8.615850e-47 |
| Msa1027630 | Msa1320740 | 0.815066 | 1.118073e-51 | -8.615850e-47 |
| Msa1027630 | Msa1322860 | 0.802212 | 6.244911e-49 | -8.615850e-47 |
| Msa1027630 | Msa1322890 | 0.810606 | 1.060201e-50 | -8.615850e-47 |
| Msa1027630 | Msa1327050 | 0.821189 | 4.608505e-53 | -8.615850e-47 |
| Msa1027630 | Msa1329700 | 0.820469 | 6.749308e-53 | -8.615850e-47 |
| Msa1027630 | Msa1346370 | 0.819256 | 1.278054e-52 | -8.615850e-47 |
| Msa1027630 | Msa1348880 | 0.805404 | 1.357195e-49 | -8.615850e-47 |
| Msa1027630 | Msa1359040 | 0.807511 | 4.876368e-50 | -8.615850e-47 |
| Msa1027630 | Msa1372760 | 0.819843 | 9.386087e-53 | -8.615850e-47 |
| Msa1027630 | Msa1374040 | 0.800423 | 1.451425e-48 | -8.615850e-47 |
| Msa1027630 | Msa1376890 | 0.818552 | 1.846571e-52 | -8.615850e-47 |
| Msa1027630 | Msa1378760 | 0.816511 | 5.325542e-52 | -8.615850e-47 |
| Msa1027630 | Msa1379850 | 0.829260 | 5.687524e-55 | -8.615850e-47 |
| Msa1027630 | Msa1384350 | 0.816553 | 5.211160e-52 | -8.615850e-47 |
| Msa1027630 | Msa1385000 | 0.813409 | 2.597589e-51 | -8.615850e-47 |
| Msa1027630 | Msa1390050 | 0.805618 | 1.223687e-49 | -8.615850e-47 |
| Msa1027630 | Msa1392260 | 0.802219 | 6.224405e-49 | -8.615850e-47 |
| Msa1027630 | Msa1393410 | 0.805998 | 1.018459e-49 | -8.615850e-47 |
| Msa1027630 | Msa1404540 | 0.824718 | 6.934083e-54 | -8.615850e-47 |
| Msa1027630 | Msa1408620 | -0.816503 | 5.347079e-52 | -8.615850e-47 |
| Msa1027630 | Msa1409870 | 0.819666 | 1.030276e-52 | -8.615850e-47 |
| Msa1027630 | Msa1411020 | 0.821483 | 3.942468e-53 | -8.615850e-47 |
| Msa1027630 | Msa1423880 | 0.831173 | 1.939692e-55 | -8.615850e-47 |
| Msa1027630 | Msa1424290 | 0.813971 | 1.953806e-51 | -8.615850e-47 |
| Msa1027630 | Msa1424680 | 0.819315 | 1.238985e-52 | -8.615850e-47 |
| Msa1027630 | Msa1427060 | 0.816901 | 4.355480e-52 | -8.615850e-47 |
| Msa1027630 | Msa1427760 | 0.802405 | 5.698410e-49 | -8.615850e-47 |
| Msa1027630 | Msa1429900 | 0.801742 | 7.798383e-49 | -8.615850e-47 |
| Msa1027630 | Msa1431060 | 0.810935 | 8.999793e-51 | -8.615850e-47 |
| Msa1027630 | Msa1434350 | 0.816605 | 5.072936e-52 | -8.615850e-47 |
| Msa1027630 | Msa1435420 | 0.803955 | 2.723168e-49 | -8.615850e-47 |
| Msa1027630 | Msa1439320 | 0.820780 | 5.724140e-53 | -8.615850e-47 |
| Msa1027630 | Msa1440740 | 0.817550 | 3.111779e-52 | -8.615850e-47 |
| Msa1027630 | Msa1452120 | 0.806554 | 7.774041e-50 | -8.615850e-47 |
| Msa1027630 | Msa1459180 | 0.822938 | 1.812495e-53 | -8.615850e-47 |
| Msa1027630 | Msa1460020 | 0.841813 | 3.783927e-58 | -8.615850e-47 |
| Msa1027630 | Msa1461300 | 0.807306 | 5.392085e-50 | -8.615850e-47 |
| Msa0243100 | Msa1027630 | 0.817485 | 3.218635e-52 | -8.615850e-47 |
| Msa0244860 | Msa1027630 | 0.815482 | 9.038786e-52 | -8.615850e-47 |
| Msa0245940 | Msa1027630 | 0.815443 | 9.219485e-52 | -8.615850e-47 |
| Msa0257250 | Msa1027630 | 0.810262 | 1.257884e-50 | -8.615850e-47 |
| Msa0258760 | Msa1027630 | 0.803027 | 4.240024e-49 | -8.615850e-47 |
| Msa0260810 | Msa1027630 | 0.819934 | 8.946069e-53 | -8.615850e-47 |
| Msa0262510 | Msa1027630 | 0.821887 | 3.179201e-53 | -8.615850e-47 |
| Msa0264780 | Msa1027630 | 0.824573 | 7.500559e-54 | -8.615850e-47 |
| Msa0270270 | Msa1027630 | 0.812960 | 3.259185e-51 | -8.615850e-47 |
| Msa0276920 | Msa1027630 | 0.817952 | 2.525329e-52 | -8.615850e-47 |
| Msa0283450 | Msa1027630 | 0.819187 | 1.324687e-52 | -8.615850e-47 |
| Msa0283520 | Msa1027630 | 0.826656 | 2.406094e-54 | -8.615850e-47 |
| Msa0284520 | Msa1027630 | 0.824873 | 6.374495e-54 | -8.615850e-47 |
| Msa0287650 | Msa1027630 | 0.836737 | 7.851854e-57 | -8.615850e-47 |
| Msa0296560 | Msa1027630 | 0.827882 | 1.224007e-54 | -8.615850e-47 |
| Msa0305700 | Msa1027630 | 0.805495 | 1.298762e-49 | -8.615850e-47 |
| Msa0311860 | Msa1027630 | 0.804392 | 2.208732e-49 | -8.615850e-47 |
| Msa0317730 | Msa1027630 | 0.825700 | 4.063857e-54 | -8.615850e-47 |
| Msa0323080 | Msa1027630 | 0.813186 | 2.907720e-51 | -8.615850e-47 |
| Msa0332000 | Msa1027630 | 0.823508 | 1.333730e-53 | -8.615850e-47 |
| Msa0335040 | Msa1027630 | 0.829558 | 4.812681e-55 | -8.615850e-47 |
| Msa0338110 | Msa1027630 | 0.803800 | 2.932987e-49 | -8.615850e-47 |
| Msa0341540 | Msa1027630 | 0.803376 | 3.589953e-49 | -8.615850e-47 |
| Msa0345970 | Msa1027630 | 0.807993 | 3.852642e-50 | -8.615850e-47 |
| Msa0351380 | Msa1027630 | 0.803788 | 2.948784e-49 | -8.615850e-47 |
| Msa0356890 | Msa1027630 | -0.837693 | 4.470693e-57 | -8.615850e-47 |
| Msa0484780 | Msa1027630 | 0.835982 | 1.221864e-56 | -8.615850e-47 |
| Msa0488560 | Msa1027630 | 0.808692 | 2.733860e-50 | -8.615850e-47 |
| Msa0498060 | Msa1027630 | 0.804200 | 2.421155e-49 | -8.615850e-47 |
| Msa0503060 | Msa1027630 | 0.826165 | 3.150358e-54 | -8.615850e-47 |
| Msa0506890 | Msa1027630 | 0.814973 | 1.172832e-51 | -8.615850e-47 |
| Msa0507680 | Msa1027630 | 0.813327 | 2.707986e-51 | -8.615850e-47 |
| Msa0509610 | Msa1027630 | 0.822012 | 2.973901e-53 | -8.615850e-47 |
| Msa0516370 | Msa1027630 | 0.829951 | 3.861089e-55 | -8.615850e-47 |
| Msa0520700 | Msa1027630 | 0.801596 | 8.357584e-49 | -8.615850e-47 |
| Msa0521880 | Msa1027630 | 0.819036 | 1.434008e-52 | -8.615850e-47 |
| Msa0533070 | Msa1027630 | 0.817300 | 3.542661e-52 | -8.615850e-47 |
| Msa0548280 | Msa1027630 | -0.819405 | 1.181678e-52 | -8.615850e-47 |
| Msa0567020 | Msa1027630 | 0.805326 | 1.409026e-49 | -8.615850e-47 |
| Msa0572420 | Msa1027630 | 0.808306 | 3.305190e-50 | -8.615850e-47 |
| Msa0572480 | Msa1027630 | 0.826481 | 2.649666e-54 | -8.615850e-47 |
| Msa0574890 | Msa1027630 | 0.811111 | 8.242179e-51 | -8.615850e-47 |
| Msa0843780 | Msa1027630 | -0.830428 | 2.953386e-55 | -8.615850e-47 |
| Msa0844240 | Msa1027630 | 0.818952 | 1.498219e-52 | -8.615850e-47 |
| Msa0850960 | Msa1027630 | 0.800737 | 1.252568e-48 | -8.615850e-47 |
| Msa0856920 | Msa1027630 | 0.816177 | 6.326508e-52 | -8.615850e-47 |
| Msa0863930 | Msa1027630 | 0.812626 | 3.857482e-51 | -8.615850e-47 |
| Msa0867890 | Msa1027630 | 0.823319 | 1.477063e-53 | -8.615850e-47 |
| Msa0870530 | Msa1027630 | 0.824416 | 8.168731e-54 | -8.615850e-47 |
| Msa0880140 | Msa1027630 | 0.810241 | 1.270978e-50 | -8.615850e-47 |
| Msa0891040 | Msa1027630 | 0.808397 | 3.159733e-50 | -8.615850e-47 |
| Msa0900620 | Msa1027630 | 0.802663 | 5.040843e-49 | -8.615850e-47 |
| Msa0903700 | Msa1027630 | 0.811162 | 8.036781e-51 | -8.615850e-47 |
| Msa0908050 | Msa1027630 | 0.829894 | 3.986820e-55 | -8.615850e-47 |
| Msa0930780 | Msa1027630 | 0.805315 | 1.416850e-49 | -8.615850e-47 |
| Msa0932730 | Msa1027630 | 0.805508 | 1.290222e-49 | -8.615850e-47 |
| Msa0933230 | Msa1027630 | 0.802409 | 5.688076e-49 | -8.615850e-47 |
| Msa0952120 | Msa1027630 | 0.812314 | 4.511214e-51 | -8.615850e-47 |
| Msa0954130 | Msa1027630 | 0.807940 | 3.954031e-50 | -8.615850e-47 |
| Msa0954550 | Msa1027630 | 0.819898 | 9.119617e-53 | -8.615850e-47 |
| Msa0969520 | Msa1027630 | 0.806891 | 6.599729e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027630 | MtrunA17_Chr7g0246731 | 80.315 | 254 | 9 | 2 | 25 | 237 | 1 | 254 | 6.50e-134 | 389 |
| Msa1027630 | MtrunA17_Chr8g0350681 | 62.791 | 258 | 48 | 5 | 25 | 237 | 1 | 255 | 6.20e-97 | 294 |
| Msa1027630 | MtrunA17_Chr3g0131821 | 34.395 | 157 | 86 | 4 | 84 | 235 | 97 | 241 | 4.90e-14 | 71.2 |
| Msa1027630 | MtrunA17_Chr4g0048401 | 28.452 | 239 | 126 | 5 | 41 | 237 | 22 | 257 | 2.46e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1027630 | AT2G45720.1 | 52.263 | 243 | 67 | 4 | 36 | 237 | 15 | 249 | 1.78e-71 | 229 |
| Msa1027630 | AT2G45720.2 | 52.263 | 243 | 67 | 4 | 36 | 237 | 15 | 249 | 1.78e-71 | 229 |
| Msa1027630 | AT2G45720.5 | 52.263 | 243 | 67 | 4 | 36 | 237 | 15 | 249 | 1.78e-71 | 229 |
| Msa1027630 | AT2G45720.3 | 52.263 | 243 | 67 | 4 | 36 | 237 | 15 | 249 | 1.78e-71 | 229 |
| Msa1027630 | AT2G45720.4 | 52.263 | 243 | 67 | 4 | 36 | 237 | 15 | 249 | 1.78e-71 | 229 |
| Msa1027630 | AT1G01830.1 | 52.459 | 244 | 68 | 4 | 32 | 233 | 27 | 264 | 1.08e-70 | 227 |
| Msa1027630 | AT1G01830.3 | 52.459 | 244 | 68 | 4 | 32 | 233 | 27 | 264 | 1.08e-70 | 227 |
| Msa1027630 | AT1G01830.2 | 52.459 | 244 | 68 | 4 | 32 | 233 | 27 | 264 | 1.08e-70 | 227 |
| Msa1027630 | AT5G50900.1 | 36.478 | 159 | 90 | 4 | 85 | 237 | 93 | 246 | 4.86e-19 | 86.7 |
| Msa1027630 | AT1G61350.1 | 27.876 | 226 | 116 | 5 | 59 | 242 | 32 | 252 | 9.90e-17 | 79.7 |
Find 39 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATGCATTAATCGGGAAAA+TGG | 0.303126 | 7_1:-60104703 | Msa1027630:CDS |
| CTTCCACCATGATCTTGATT+TGG | 0.323670 | 7_1:+60105033 | None:intergenic |
| GATAAGTTTGATAACATTGA+TGG | 0.335620 | 7_1:+60104867 | None:intergenic |
| GACACGGAAGACGCATTTAA+TGG | 0.337388 | 7_1:+60104618 | None:intergenic |
| TTTGCTTTATCAAGAGCAAT+AGG | 0.341641 | 7_1:+60104948 | None:intergenic |
| CTTATAAGACTTGTTGAATC+AGG | 0.347476 | 7_1:-60104297 | Msa1027630:CDS |
| TATATGCTCGCTAGCCGAAT+CGG | 0.388263 | 7_1:-60104364 | Msa1027630:CDS |
| AGAAGATGAAAAGAATGTTT+TGG | 0.395867 | 7_1:-60104472 | Msa1027630:CDS |
| AGTGATCTGGATGCATTAAT+CGG | 0.402558 | 7_1:-60104711 | Msa1027630:CDS |
| TTAAATGCGTCTTCCGTGTC+AGG | 0.404129 | 7_1:-60104615 | Msa1027630:CDS |
| TGCTCTTGATAAAGCAAAAG+AGG | 0.413222 | 7_1:-60104943 | Msa1027630:CDS |
| AGAAGCGAAGCACAAGGCTT+TGG | 0.430961 | 7_1:-60104517 | Msa1027630:CDS |
| CAGGAGCAACATTGCTGCAC+TGG | 0.435703 | 7_1:-60104439 | Msa1027630:CDS |
| ACTTCAGATGCAGAGTGATC+TGG | 0.435997 | 7_1:-60104724 | Msa1027630:CDS |
| ATATACTTTCAACAGAAGAT+TGG | 0.437674 | 7_1:-60104995 | Msa1027630:CDS |
| CAGCAGTCCACAACAACATA+AGG | 0.439287 | 7_1:-60104572 | Msa1027630:CDS |
| ATATGCTCGCTAGCCGAATC+GGG | 0.444293 | 7_1:-60104363 | Msa1027630:CDS |
| AGCAAGGATAAGAGAGAAAA+CGG | 0.480671 | 7_1:-60104394 | Msa1027630:CDS |
| ATCCTCGCAGCTACCCGATT+CGG | 0.503854 | 7_1:+60104350 | None:intergenic |
| GATTTGAATTTACGAGATTG+TGG | 0.508625 | 7_1:-60104681 | Msa1027630:CDS |
| TTACTTGCGCGTCTTCAGAT+TGG | 0.514988 | 7_1:-60104546 | Msa1027630:CDS |
| GATTCAACAAGTCTTATAAG+AGG | 0.524542 | 7_1:+60104300 | None:intergenic |
| AATCGGGTAGCTGCGAGGAT+TGG | 0.524824 | 7_1:-60104347 | Msa1027630:CDS |
| ATCAAGATCATGGTGGAAGA+TGG | 0.531828 | 7_1:-60105029 | Msa1027630:CDS |
| GTAACTCCCTTATGTTGTTG+TGG | 0.537135 | 7_1:+60104565 | None:intergenic |
| TTGATCAGAACTGGTATGCT+CGG | 0.540578 | 7_1:-60104654 | Msa1027630:CDS |
| GTTACAAAGGTTATCAATGT+CGG | 0.540691 | 7_1:-60104241 | Msa1027630:CDS |
| GTGATCTGGATGCATTAATC+GGG | 0.542255 | 7_1:-60104710 | Msa1027630:CDS |
| AGATTGGTTGTTACATGCAA+AGG | 0.544625 | 7_1:-60104979 | Msa1027630:CDS |
| AAGTGCTGTAGGTAAAGAAA+AGG | 0.551122 | 7_1:-60104274 | Msa1027630:intron |
| AGCAGTCCACAACAACATAA+GGG | 0.579862 | 7_1:-60104571 | Msa1027630:CDS |
| GAGGATTGGCTAGTTTCTGA+AGG | 0.584950 | 7_1:-60104333 | Msa1027630:CDS |
| TCAACAAGTCTTATAAGAGG+TGG | 0.596638 | 7_1:+60104303 | None:intergenic |
| AGGCTGCAATATCGTTACAA+AGG | 0.609712 | 7_1:-60104254 | Msa1027630:CDS |
| TTCTGTCGCAGAACCTGACA+CGG | 0.614968 | 7_1:+60104602 | None:intergenic |
| TGCTTACAGCAACATCAGCA+AGG | 0.639711 | 7_1:-60104410 | Msa1027630:CDS |
| TCACTTAGAAGCGAAGCACA+AGG | 0.647162 | 7_1:-60104523 | Msa1027630:CDS |
| CAGAACTGGTATGCTCGGCG+AGG | 0.694359 | 7_1:-60104649 | Msa1027630:CDS |
| TTACCAAATCAAGATCATGG+TGG | 0.739992 | 7_1:-60105036 | Msa1027630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATACAAAACAAATTATT+AGG | + | chr7_1:60105121-60105140 | None:intergenic | 10.0% |
| !!! | TTTTATGAAATTAAAAAAAG+TGG | - | chr7_1:60105335-60105354 | Msa1027630:intron | 10.0% |
| !! | TTTATGAAATTAAAAAAAGT+GGG | - | chr7_1:60105336-60105355 | Msa1027630:intron | 10.0% |
| !! | ATCATCATTATTATTTAATT+TGG | + | chr7_1:60105974-60105993 | None:intergenic | 10.0% |
| !! | TAGTAATATTTAAATATCTT+AGG | + | chr7_1:60106151-60106170 | None:intergenic | 10.0% |
| !!! | ATATTAATGAAATTTTTTAG+TGG | - | chr7_1:60106200-60106219 | Msa1027630:intron | 10.0% |
| !!! | TATTAATGAAATTTTTTAGT+GGG | - | chr7_1:60106201-60106220 | Msa1027630:intron | 10.0% |
| !!! | AAAAAAATAAGAAGATATTT+TGG | + | chr7_1:60107586-60107605 | None:intergenic | 10.0% |
| !!! | AAATATCTTCTTATTTTTTT+AGG | - | chr7_1:60107586-60107605 | Msa1027630:intron | 10.0% |
| !!! | AATATCTTCTTATTTTTTTA+GGG | - | chr7_1:60107587-60107606 | Msa1027630:intron | 10.0% |
| !!! | ATTGTATGATTATAATTTTT+TGG | - | chr7_1:60107651-60107670 | Msa1027630:intron | 10.0% |
| !!! | TTGTATGATTATAATTTTTT+GGG | - | chr7_1:60107652-60107671 | Msa1027630:intron | 10.0% |
| !!! | TAAGTTGTTTTGTATAAATA+AGG | - | chr7_1:60105062-60105081 | Msa1027630:CDS | 15.0% |
| !!! | AAAAAAATTTGTTAATGGAT+TGG | + | chr7_1:60105560-60105579 | None:intergenic | 15.0% |
| !!! | CAAACAAAAAAATTTGTTAA+TGG | + | chr7_1:60105565-60105584 | None:intergenic | 15.0% |
| !!! | TAACAAATTTTTTTGTTTGA+TGG | - | chr7_1:60105566-60105585 | Msa1027630:intron | 15.0% |
| !! | TGTAAAAATGTAGAATTTAT+TGG | - | chr7_1:60105768-60105787 | Msa1027630:intron | 15.0% |
| !! | AGAATAAAGATATATATGTA+AGG | - | chr7_1:60105944-60105963 | Msa1027630:intron | 15.0% |
| !! | GAATAAAGATATATATGTAA+GGG | - | chr7_1:60105945-60105964 | Msa1027630:intron | 15.0% |
| !!! | AAATTATTTCTACAATTTTC+AGG | - | chr7_1:60106013-60106032 | Msa1027630:intron | 15.0% |
| !! | TGAATTGATTATAATATCAT+AGG | - | chr7_1:60107784-60107803 | Msa1027630:intron | 15.0% |
| !!! | TTGACATAAGAAATTTTAAA+AGG | + | chr7_1:60107921-60107940 | None:intergenic | 15.0% |
| !!! | GCATAAAAAATTATTCGTTT+TGG | - | chr7_1:60105305-60105324 | Msa1027630:intron | 20.0% |
| !!! | TATTTTTTGAAGTTATCCAT+TGG | - | chr7_1:60105443-60105462 | Msa1027630:intron | 20.0% |
| !!! | TTTAAAACAAAAAAGTCCAA+TGG | + | chr7_1:60105462-60105481 | None:intergenic | 20.0% |
| !!! | AAATTTTTTTGTTTGATGGA+TGG | - | chr7_1:60105570-60105589 | Msa1027630:intron | 20.0% |
| !! | ATCCATAAAAAAGCAAAATT+TGG | - | chr7_1:60106278-60106297 | Msa1027630:intron | 20.0% |
| !!! | TTCCAAATTTTGCTTTTTTA+TGG | + | chr7_1:60106283-60106302 | None:intergenic | 20.0% |
| !!! | TTACAACATATTTGAAATCT+AGG | - | chr7_1:60106658-60106677 | Msa1027630:intron | 20.0% |
| !! | CTAATAATACAAAATACAAG+TGG | + | chr7_1:60106925-60106944 | None:intergenic | 20.0% |
| !! | GAACAATAACAATAACAAAA+GGG | + | chr7_1:60107043-60107062 | None:intergenic | 20.0% |
| !! | AGAACAATAACAATAACAAA+AGG | + | chr7_1:60107044-60107063 | None:intergenic | 20.0% |
| !!! | AGTAATTTTTGTCTTTAGTA+TGG | - | chr7_1:60107120-60107139 | Msa1027630:intron | 20.0% |
| !!! | TTTAGTATGGTTAGATTTTA+TGG | - | chr7_1:60107133-60107152 | Msa1027630:intron | 20.0% |
| !!! | TTAGTATGGTTAGATTTTAT+GGG | - | chr7_1:60107134-60107153 | Msa1027630:intron | 20.0% |
| !!! | GTAATTTTGTAATCTTTCTT+GGG | + | chr7_1:60107521-60107540 | None:intergenic | 20.0% |
| !! | TTTAAGTACAAATGTACTAT+TGG | + | chr7_1:60107543-60107562 | None:intergenic | 20.0% |
| !! | ATAGTACATTTGTACTTAAA+AGG | - | chr7_1:60107543-60107562 | Msa1027630:intron | 20.0% |
| !! | TAGTACATTTGTACTTAAAA+GGG | - | chr7_1:60107544-60107563 | Msa1027630:intron | 20.0% |
| !!! | TAAGAAATTTTAAAAGGTTG+TGG | + | chr7_1:60107915-60107934 | None:intergenic | 20.0% |
| !!! | TTAAAAGTTTTCCTACTAAA+TGG | - | chr7_1:60108162-60108181 | Msa1027630:intron | 20.0% |
| !!! | AATTTTAAGGTCATGGTATA+CGG | - | chr7_1:60104506-60104525 | Msa1027630:intron | 25.0% |
| !!! | TAATCAAAACGCGATTTTTT+AGG | - | chr7_1:60104632-60104651 | Msa1027630:CDS | 25.0% |
| ! | CTGTACAAAGATTATATTGT+TGG | - | chr7_1:60104718-60104737 | Msa1027630:CDS | 25.0% |
| ! | TACAAAGATTATATTGTTGG+CGG | - | chr7_1:60104721-60104740 | Msa1027630:CDS | 25.0% |
| !!! | TGGACTTTTTTGTTTTAAAG+AGG | - | chr7_1:60105463-60105482 | Msa1027630:intron | 25.0% |
| !! | TCCATTGGATTTTTAACATA+AGG | - | chr7_1:60105489-60105508 | Msa1027630:intron | 25.0% |
| ! | ACCTTATGTTAAAAATCCAA+TGG | + | chr7_1:60105493-60105512 | None:intergenic | 25.0% |
| !! | ATTGGATTTTTAACATAAGG+TGG | - | chr7_1:60105492-60105511 | Msa1027630:intron | 25.0% |
| !! | AATCCATCCATAGTTTTTAA+TGG | - | chr7_1:60105523-60105542 | Msa1027630:intron | 25.0% |
| ! | AATCCATTAAAAACTATGGA+TGG | + | chr7_1:60105529-60105548 | None:intergenic | 25.0% |
| ! | GATCAATCCATTAAAAACTA+TGG | + | chr7_1:60105533-60105552 | None:intergenic | 25.0% |
| !!! | AATTTGTTAATGGATTGGTT+TGG | + | chr7_1:60105555-60105574 | None:intergenic | 25.0% |
| !!! | TCCTTTTAAGGTATAAACTA+GGG | + | chr7_1:60105658-60105677 | None:intergenic | 25.0% |
| !!! | TTCCTTTTAAGGTATAAACT+AGG | + | chr7_1:60105659-60105678 | None:intergenic | 25.0% |
| !! | ACTATAAGACTTTTAGTGTT+AGG | - | chr7_1:60106167-60106186 | Msa1027630:intron | 25.0% |
| !! | CTATAAGACTTTTAGTGTTA+GGG | - | chr7_1:60106168-60106187 | Msa1027630:intron | 25.0% |
| !! | TATAAGACTTTTAGTGTTAG+GGG | - | chr7_1:60106169-60106188 | Msa1027630:intron | 25.0% |
| !!! | TTATTTTTCTCTGTCAACAA+CGG | + | chr7_1:60106405-60106424 | None:intergenic | 25.0% |
| ! | TAAGAAGCAGAAACTATTTA+TGG | - | chr7_1:60106779-60106798 | Msa1027630:intron | 25.0% |
| ! | AAGAAGCAGAAACTATTTAT+GGG | - | chr7_1:60106780-60106799 | Msa1027630:intron | 25.0% |
| !! | AAATTGAGAAAACTGTTTCT+GGG | - | chr7_1:60106812-60106831 | Msa1027630:intron | 25.0% |
| ! | ATAATACAAAATACAAGTGG+TGG | + | chr7_1:60106922-60106941 | None:intergenic | 25.0% |
| ! | TAACAATAACAAAAGGGAAA+AGG | + | chr7_1:60107037-60107056 | None:intergenic | 25.0% |
| ! | TACAGTAACATATGATATGA+TGG | - | chr7_1:60107189-60107208 | Msa1027630:intron | 25.0% |
| !! | TGACAAGTCAATTTGATTTA+AGG | - | chr7_1:60107232-60107251 | Msa1027630:intron | 25.0% |
| ! | TAATCTTTCTTGGGATAAAT+TGG | + | chr7_1:60107512-60107531 | None:intergenic | 25.0% |
| !! | GGTAATTTTGTAATCTTTCT+TGG | + | chr7_1:60107522-60107541 | None:intergenic | 25.0% |
| ! | GTTTACTTAAAAACATGACT+TGG | + | chr7_1:60107749-60107768 | None:intergenic | 25.0% |
| ! | ATATACTTTCAACAGAAGAT+TGG | - | chr7_1:60108087-60108106 | Msa1027630:intron | 25.0% |
| !! | ATGATCATTTTCCATTTAGT+AGG | + | chr7_1:60108176-60108195 | None:intergenic | 25.0% |
| !! | GATAAGTTTGATAACATTGA+TGG | + | chr7_1:60108218-60108237 | None:intergenic | 25.0% |
| !! | AGAAGATGAAAAGAATGTTT+TGG | - | chr7_1:60108610-60108629 | Msa1027630:intron | 25.0% |
| CCATAAGTTATGGATCATAA+GGG | + | chr7_1:60104266-60104285 | None:intergenic | 30.0% | |
| TCCATAAGTTATGGATCATA+AGG | + | chr7_1:60104267-60104286 | None:intergenic | 30.0% | |
| GTCTTTGTAGTATTGTTTCA+AGG | - | chr7_1:60104349-60104368 | Msa1027630:CDS | 30.0% | |
| TATTGTTTCAAGGATTGAAG+TGG | - | chr7_1:60104359-60104378 | Msa1027630:CDS | 30.0% | |
| CTTGCATGTAGTTTATAGTA+TGG | - | chr7_1:60104444-60104463 | Msa1027630:CDS | 30.0% | |
| TGACCTTAAAATTGTTGTGT+GGG | + | chr7_1:60104499-60104518 | None:intergenic | 30.0% | |
| ATGACCTTAAAATTGTTGTG+TGG | + | chr7_1:60104500-60104519 | None:intergenic | 30.0% | |
| !!! | ACACAACAATTTTAAGGTCA+TGG | - | chr7_1:60104499-60104518 | Msa1027630:intron | 30.0% |
| AAAGTTGTACAACAGTAAAC+TGG | + | chr7_1:60104963-60104982 | None:intergenic | 30.0% | |
| !!! | TGTTGTACAACTTTTAGCTT+AGG | - | chr7_1:60104969-60104988 | Msa1027630:CDS | 30.0% |
| ! | GATTTTTAACATAAGGTGGA+TGG | - | chr7_1:60105496-60105515 | Msa1027630:intron | 30.0% |
| !! | TTTTTGTTTGATGGATGGAT+TGG | - | chr7_1:60105575-60105594 | Msa1027630:intron | 30.0% |
| TTGGATGGATATGAATTTCA+TGG | - | chr7_1:60105619-60105638 | Msa1027630:intron | 30.0% | |
| !!! | CCTTTTAAGGTATAAACTAG+GGG | + | chr7_1:60105657-60105676 | None:intergenic | 30.0% |
| TTCATTGAGACTACTGAATT+TGG | - | chr7_1:60105809-60105828 | Msa1027630:intron | 30.0% | |
| ! | AGTCACGTTTGATAATCTAA+CGG | + | chr7_1:60106379-60106398 | None:intergenic | 30.0% |
| CTAAGATAATGAATGTGTCA+GGG | + | chr7_1:60106466-60106485 | None:intergenic | 30.0% | |
| ! | CAACATATTTGAAATCTAGG+TGG | - | chr7_1:60106661-60106680 | Msa1027630:intron | 30.0% |
| GAAATTGAGAAAACTGTTTC+TGG | - | chr7_1:60106811-60106830 | Msa1027630:intron | 30.0% | |
| TTTGAAGATTAAGCCAAACT+GGG | - | chr7_1:60106967-60106986 | Msa1027630:intron | 30.0% | |
| !!! | TTCTTCCTTCCTTTTTTTTG+TGG | - | chr7_1:60107274-60107293 | Msa1027630:intron | 30.0% |
| CATTCATCACCACAAAAAAA+AGG | + | chr7_1:60107286-60107305 | None:intergenic | 30.0% | |
| ATGTACACAATATACAACTG+TGG | - | chr7_1:60107319-60107338 | Msa1027630:intron | 30.0% | |
| TTTCTACTTAACTCTTGAGA+TGG | - | chr7_1:60107431-60107450 | Msa1027630:intron | 30.0% | |
| TTCTACTTAACTCTTGAGAT+GGG | - | chr7_1:60107432-60107451 | Msa1027630:intron | 30.0% | |
| !! | TCTAACTTTACTTTTGAGCA+TGG | + | chr7_1:60107470-60107489 | None:intergenic | 30.0% |
| !!! | TGTACTTAAAAGGGTACTTT+TGG | - | chr7_1:60107553-60107572 | Msa1027630:intron | 30.0% |
| !! | TTTGTAATGGGCATGATATA+TGG | - | chr7_1:60107624-60107643 | Msa1027630:intron | 30.0% |
| AAAGTAAGAGAAAAGACTAG+TGG | - | chr7_1:60107694-60107713 | Msa1027630:intron | 30.0% | |
| AAGTAAGAGAAAAGACTAGT+GGG | - | chr7_1:60107695-60107714 | Msa1027630:intron | 30.0% | |
| TTTAGGTACTTCAGATTTGT+TGG | - | chr7_1:60107723-60107742 | Msa1027630:intron | 30.0% | |
| ! | AGGAGATTCTAGAAATTTGT+TGG | - | chr7_1:60107804-60107823 | Msa1027630:intron | 30.0% |
| GTGAAGCACAAAAAAACAAA+TGG | + | chr7_1:60107831-60107850 | None:intergenic | 30.0% | |
| ! | GTGCTTCACAATTTTTCTAT+TGG | - | chr7_1:60107842-60107861 | Msa1027630:intron | 30.0% |
| CTATTTGCAAATTGACATCT+TGG | - | chr7_1:60107956-60107975 | Msa1027630:intron | 30.0% | |
| ATCTTGGATCATTTCTTTGA+AGG | - | chr7_1:60107972-60107991 | Msa1027630:intron | 30.0% | |
| !!! | ATTTTTTGTGTCAGTTTCTG+TGG | - | chr7_1:60108005-60108024 | Msa1027630:intron | 30.0% |
| ! | CTTTTACCAAATCAAGATCA+TGG | - | chr7_1:60108043-60108062 | Msa1027630:intron | 30.0% |
| TTTGCTTTATCAAGAGCAAT+AGG | + | chr7_1:60108137-60108156 | None:intergenic | 30.0% | |
| GATTTGAATTTACGAGATTG+TGG | - | chr7_1:60108401-60108420 | Msa1027630:intron | 30.0% | |
| ! | GATTCAACAAGTCTTATAAG+AGG | + | chr7_1:60108785-60108804 | None:intergenic | 30.0% |
| !! | CTTATAAGACTTGTTGAATC+AGG | - | chr7_1:60108785-60108804 | Msa1027630:intron | 30.0% |
| GTTACAAAGGTTATCAATGT+CGG | - | chr7_1:60108841-60108860 | Msa1027630:intron | 30.0% | |
| AAATCTTCCTCAATTCAAGC+TGG | - | chr7_1:60104223-60104242 | Msa1027630:CDS | 35.0% | |
| AATCTTCCTCAATTCAAGCT+GGG | - | chr7_1:60104224-60104243 | Msa1027630:CDS | 35.0% | |
| CCCTTATGATCCATAACTTA+TGG | - | chr7_1:60104263-60104282 | Msa1027630:CDS | 35.0% | |
| TAAGGAAGGTCCATAAGTTA+TGG | + | chr7_1:60104276-60104295 | None:intergenic | 35.0% | |
| !!! | ACTTTGGTCGTTTTTAAGGA+AGG | + | chr7_1:60104290-60104309 | None:intergenic | 35.0% |
| !!! | TGGTACTTTGGTCGTTTTTA+AGG | + | chr7_1:60104294-60104313 | None:intergenic | 35.0% |
| ATATTACTGACATGTGTTGC+TGG | + | chr7_1:60104326-60104345 | None:intergenic | 35.0% | |
| ! | CATGCAAGTATTGTGAAAAC+TGG | + | chr7_1:60104432-60104451 | None:intergenic | 35.0% |
| GACCTTAAAATTGTTGTGTG+GGG | + | chr7_1:60104498-60104517 | None:intergenic | 35.0% | |
| AGTCACAAACTACATGATGT+CGG | + | chr7_1:60104685-60104704 | None:intergenic | 35.0% | |
| TACCTATCTGTGTTCTTTGT+GGG | - | chr7_1:60104828-60104847 | Msa1027630:intron | 35.0% | |
| ! | ATTTGAGGTAAGCACAGATT+AGG | + | chr7_1:60105032-60105051 | None:intergenic | 35.0% |
| ACTTATTACGATCGCATTTG+AGG | + | chr7_1:60105047-60105066 | None:intergenic | 35.0% | |
| !!! | GTTTTAAAGAGGTGATCCAT+TGG | - | chr7_1:60105474-60105493 | Msa1027630:intron | 35.0% |
| !!! | GGATTTTGTAGTGGATGAAT+TGG | - | chr7_1:60105600-60105619 | Msa1027630:intron | 35.0% |
| !! | TTTGTAGTGGATGAATTGGA+TGG | - | chr7_1:60105604-60105623 | Msa1027630:intron | 35.0% |
| ! | TTTAAGGTATAAACTAGGGG+TGG | + | chr7_1:60105654-60105673 | None:intergenic | 35.0% |
| CCCCTAGTTTATACCTTAAA+AGG | - | chr7_1:60105654-60105673 | Msa1027630:intron | 35.0% | |
| ! | GCTTAGGCATATTCCTTTTA+AGG | + | chr7_1:60105670-60105689 | None:intergenic | 35.0% |
| AATATGCCTAAGCATTCTAC+CGG | - | chr7_1:60105677-60105696 | Msa1027630:intron | 35.0% | |
| TTGAGAAACTTGACATGACA+AGG | + | chr7_1:60106046-60106065 | None:intergenic | 35.0% | |
| ATCACACAATCTAATCCCAA+CGG | - | chr7_1:60106322-60106341 | Msa1027630:intron | 35.0% | |
| GCTAAGATAATGAATGTGTC+AGG | + | chr7_1:60106467-60106486 | None:intergenic | 35.0% | |
| GGCTTAATCTTCAAACTTCA+TGG | + | chr7_1:60106962-60106981 | None:intergenic | 35.0% | |
| GTTTGAAGATTAAGCCAAAC+TGG | - | chr7_1:60106966-60106985 | Msa1027630:intron | 35.0% | |
| !! | TCTCAGTTACTGGTTCTTTA+AGG | - | chr7_1:60106995-60107014 | Msa1027630:intron | 35.0% |
| !! | AGTTACTGGTTCTTTAAGGT+TGG | - | chr7_1:60106999-60107018 | Msa1027630:intron | 35.0% |
| ! | TGGTTAGATTTTATGGGACA+TGG | - | chr7_1:60107140-60107159 | Msa1027630:intron | 35.0% |
| CATCACCACAAAAAAAAGGA+AGG | + | chr7_1:60107282-60107301 | None:intergenic | 35.0% | |
| GACTTGTGTCTTTCTTTAGA+AGG | - | chr7_1:60107347-60107366 | Msa1027630:intron | 35.0% | |
| CTTAACTATGAGAAAGGGAA+AGG | + | chr7_1:60107377-60107396 | None:intergenic | 35.0% | |
| TTCCCTTTCTCATAGTTAAG+AGG | - | chr7_1:60107377-60107396 | Msa1027630:intron | 35.0% | |
| CTCCTCTTAACTATGAGAAA+GGG | + | chr7_1:60107382-60107401 | None:intergenic | 35.0% | |
| TCTCCTCTTAACTATGAGAA+AGG | + | chr7_1:60107383-60107402 | None:intergenic | 35.0% | |
| TTACCAAATCAAGATCATGG+TGG | - | chr7_1:60108046-60108065 | Msa1027630:intron | 35.0% | |
| ! | AGATTGGTTGTTACATGCAA+AGG | - | chr7_1:60108103-60108122 | Msa1027630:intron | 35.0% |
| TGCTCTTGATAAAGCAAAAG+AGG | - | chr7_1:60108139-60108158 | Msa1027630:intron | 35.0% | |
| ! | AGAGCATTCTTTGAGAAACA+TGG | + | chr7_1:60108248-60108267 | None:intergenic | 35.0% |
| AGTGATCTGGATGCATTAAT+CGG | - | chr7_1:60108371-60108390 | Msa1027630:intron | 35.0% | |
| !!! | ATGTTTTGGCTGTTTTTAGC+AGG | - | chr7_1:60108624-60108643 | Msa1027630:intron | 35.0% |
| AGCAAGGATAAGAGAGAAAA+CGG | - | chr7_1:60108688-60108707 | Msa1027630:intron | 35.0% | |
| ! | TCAACAAGTCTTATAAGAGG+TGG | + | chr7_1:60108782-60108801 | None:intergenic | 35.0% |
| ! | AAGTGCTGTAGGTAAAGAAA+AGG | - | chr7_1:60108808-60108827 | Msa1027630:intron | 35.0% |
| ! | AAAACGACCAAAGTACCACA+CGG | - | chr7_1:60104296-60104315 | Msa1027630:CDS | 40.0% |
| ! | GGTTGTTGTTGTTGCAATCT+AGG | + | chr7_1:60104411-60104430 | None:intergenic | 40.0% |
| ! | TGCCCCACACAACAATTTTA+AGG | - | chr7_1:60104493-60104512 | Msa1027630:intron | 40.0% |
| TAAGGTCATGGTATACGGAT+TGG | - | chr7_1:60104511-60104530 | Msa1027630:intron | 40.0% | |
| CTACCTATCTGTGTTCTTTG+TGG | - | chr7_1:60104827-60104846 | Msa1027630:intron | 40.0% | |
| GCAAACGTCTACGAATACAA+TGG | + | chr7_1:60104931-60104950 | None:intergenic | 40.0% | |
| !! | TGTTTGATGGATGGATTGGA+TGG | - | chr7_1:60105579-60105598 | Msa1027630:intron | 40.0% |
| !! | GGATTGGATGGATTTTGTAG+TGG | - | chr7_1:60105591-60105610 | Msa1027630:intron | 40.0% |
| ! | AAGACTTTTAGTGTTAGGGG+TGG | - | chr7_1:60106172-60106191 | Msa1027630:intron | 40.0% |
| ! | AGACTTTTAGTGTTAGGGGT+GGG | - | chr7_1:60106173-60106192 | Msa1027630:intron | 40.0% |
| TCTGTCCTAAGATCATGTCA+TGG | - | chr7_1:60106353-60106372 | Msa1027630:intron | 40.0% | |
| ! | TGAAAGACACGTTTTCGCTT+AGG | - | chr7_1:60106856-60106875 | Msa1027630:intron | 40.0% |
| !! | ACTGGTTCTTTAAGGTTGGT+TGG | - | chr7_1:60107003-60107022 | Msa1027630:intron | 40.0% |
| AAGACTAGTGGGACATGTTT+AGG | - | chr7_1:60107706-60107725 | Msa1027630:intron | 40.0% | |
| CTTCCACCATGATCTTGATT+TGG | + | chr7_1:60108052-60108071 | None:intergenic | 40.0% | |
| ! | ATCAAGATCATGGTGGAAGA+TGG | - | chr7_1:60108053-60108072 | Msa1027630:intron | 40.0% |
| CTCAAAGAATGCTCTTTGCA+AGG | - | chr7_1:60108253-60108272 | Msa1027630:intron | 40.0% | |
| ATCAGCTGAATTGTGTGTGA+AGG | - | chr7_1:60108319-60108338 | Msa1027630:intron | 40.0% | |
| ! | TGTGTGAAGGAGAAGTATGA+AGG | - | chr7_1:60108332-60108351 | Msa1027630:intron | 40.0% |
| GTGATCTGGATGCATTAATC+GGG | - | chr7_1:60108372-60108391 | Msa1027630:intron | 40.0% | |
| GGATGCATTAATCGGGAAAA+TGG | - | chr7_1:60108379-60108398 | Msa1027630:intron | 40.0% | |
| ! | TGTGGACTTTTGATCAGAAC+TGG | - | chr7_1:60108419-60108438 | Msa1027630:intron | 40.0% |
| TTGATCAGAACTGGTATGCT+CGG | - | chr7_1:60108428-60108447 | Msa1027630:intron | 40.0% | |
| AGCAGTCCACAACAACATAA+GGG | - | chr7_1:60108511-60108530 | Msa1027630:intron | 40.0% | |
| GTAACTCCCTTATGTTGTTG+TGG | + | chr7_1:60108520-60108539 | None:intergenic | 40.0% | |
| AGGCTGCAATATCGTTACAA+AGG | - | chr7_1:60108828-60108847 | Msa1027630:intron | 40.0% | |
| GACCCACAAAGAACACAGAT+AGG | + | chr7_1:60104833-60104852 | None:intergenic | 45.0% | |
| TTGACTCCGGTAGAATGCTT+AGG | + | chr7_1:60105686-60105705 | None:intergenic | 45.0% | |
| !! | CAGCTCGTATGTATTGACTC+CGG | + | chr7_1:60105699-60105718 | None:intergenic | 45.0% |
| AACGGCCATGACATGATCTT+AGG | + | chr7_1:60106361-60106380 | None:intergenic | 45.0% | |
| AACTGAGAAGCAACCCAGTT+TGG | + | chr7_1:60106983-60107002 | None:intergenic | 45.0% | |
| TCTTTGCAAGGAGCAATTGC+AGG | - | chr7_1:60108265-60108284 | Msa1027630:intron | 45.0% | |
| ACTTCAGATGCAGAGTGATC+TGG | - | chr7_1:60108358-60108377 | Msa1027630:intron | 45.0% | |
| GACACGGAAGACGCATTTAA+TGG | + | chr7_1:60108467-60108486 | None:intergenic | 45.0% | |
| TTAAATGCGTCTTCCGTGTC+AGG | - | chr7_1:60108467-60108486 | Msa1027630:intron | 45.0% | |
| CAGCAGTCCACAACAACATA+AGG | - | chr7_1:60108510-60108529 | Msa1027630:intron | 45.0% | |
| TTACTTGCGCGTCTTCAGAT+TGG | - | chr7_1:60108536-60108555 | Msa1027630:intron | 45.0% | |
| TCACTTAGAAGCGAAGCACA+AGG | - | chr7_1:60108559-60108578 | Msa1027630:intron | 45.0% | |
| TGCTTACAGCAACATCAGCA+AGG | - | chr7_1:60108672-60108691 | Msa1027630:intron | 45.0% | |
| TATATGCTCGCTAGCCGAAT+CGG | - | chr7_1:60108718-60108737 | Msa1027630:intron | 45.0% | |
| !! | GAGGATTGGCTAGTTTCTGA+AGG | - | chr7_1:60108749-60108768 | Msa1027630:intron | 45.0% |
| !! | GTTGAATCAGGAAGTGCTGT+AGG | - | chr7_1:60108797-60108816 | Msa1027630:intron | 45.0% |
| !! | TAAAACAAAAATAAAATATT+AGG | + | chr7_1:60105737-60105756 | None:intergenic | 5.0% |
| !!! | AGTATTTTTTATATATATTT+TGG | - | chr7_1:60106704-60106723 | Msa1027630:intron | 5.0% |
| !!! | AATTAATTTTTAATTTGTAA+TGG | - | chr7_1:60107611-60107630 | Msa1027630:intron | 5.0% |
| !!! | ATTAATTTTTAATTTGTAAT+GGG | - | chr7_1:60107612-60107631 | Msa1027630:intron | 5.0% |
| TGCACACCCAGCTTGAATTG+AGG | + | chr7_1:60104233-60104252 | None:intergenic | 50.0% | |
| GGACAGACAATGCAACCGTT+GGG | + | chr7_1:60106340-60106359 | None:intergenic | 50.0% | |
| AGGACAGACAATGCAACCGT+TGG | + | chr7_1:60106341-60106360 | None:intergenic | 50.0% | |
| CTGGGTTGCTTCTCAGTTAC+TGG | - | chr7_1:60106985-60107004 | Msa1027630:intron | 50.0% | |
| TTCTGTCGCAGAACCTGACA+CGG | + | chr7_1:60108483-60108502 | None:intergenic | 50.0% | |
| AGAAGCGAAGCACAAGGCTT+TGG | - | chr7_1:60108565-60108584 | Msa1027630:intron | 50.0% | |
| !! | GGCTTTGGACAGTGTTGTTG+AGG | - | chr7_1:60108580-60108599 | Msa1027630:intron | 50.0% |
| ATATGCTCGCTAGCCGAATC+GGG | - | chr7_1:60108719-60108738 | Msa1027630:intron | 50.0% | |
| !! | TGGAGCACCGTGTGGTACTT+TGG | + | chr7_1:60104306-60104325 | None:intergenic | 55.0% |
| GCGTTGTCGAAGTCGCTTGA+AGG | - | chr7_1:60108287-60108306 | Msa1027630:intron | 55.0% | |
| CAGGAGCAACATTGCTGCAC+TGG | - | chr7_1:60108643-60108662 | Msa1027630:intron | 55.0% | |
| ATCCTCGCAGCTACCCGATT+CGG | + | chr7_1:60108735-60108754 | None:intergenic | 55.0% | |
| AATCGGGTAGCTGCGAGGAT+TGG | - | chr7_1:60108735-60108754 | Msa1027630:intron | 55.0% | |
| !! | TGTGTTGCTGGAGCACCGTG+TGG | + | chr7_1:60104314-60104333 | None:intergenic | 60.0% |
| CAGAACTGGTATGCTCGGCG+AGG | - | chr7_1:60108433-60108452 | Msa1027630:intron | 60.0% | |
| AGCCGAATCGGGTAGCTGCG+AGG | - | chr7_1:60108730-60108749 | Msa1027630:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 60104217 | 60108887 | 60104217 | ID=Msa1027630;Name=Msa1027630 |
| chr7_1 | mRNA | 60104217 | 60108887 | 60104217 | ID=Msa1027630-mRNA-1;Parent=Msa1027630;Name=Msa1027630-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0|0|0.8|0|0.2|5|0|256 |
| chr7_1 | exon | 60108884 | 60108887 | 60108884 | ID=Msa1027630-mRNA-1:exon:12403;Parent=Msa1027630-mRNA-1 |
| chr7_1 | exon | 60104865 | 60105110 | 60104865 | ID=Msa1027630-mRNA-1:exon:12402;Parent=Msa1027630-mRNA-1 |
| chr7_1 | exon | 60104512 | 60104750 | 60104512 | ID=Msa1027630-mRNA-1:exon:12401;Parent=Msa1027630-mRNA-1 |
| chr7_1 | exon | 60104290 | 60104502 | 60104290 | ID=Msa1027630-mRNA-1:exon:12400;Parent=Msa1027630-mRNA-1 |
| chr7_1 | exon | 60104217 | 60104285 | 60104217 | ID=Msa1027630-mRNA-1:exon:12399;Parent=Msa1027630-mRNA-1 |
| chr7_1 | CDS | 60108884 | 60108887 | 60108884 | ID=Msa1027630-mRNA-1:cds;Parent=Msa1027630-mRNA-1 |
| chr7_1 | CDS | 60104865 | 60105110 | 60104865 | ID=Msa1027630-mRNA-1:cds;Parent=Msa1027630-mRNA-1 |
| chr7_1 | CDS | 60104512 | 60104750 | 60104512 | ID=Msa1027630-mRNA-1:cds;Parent=Msa1027630-mRNA-1 |
| chr7_1 | CDS | 60104290 | 60104502 | 60104290 | ID=Msa1027630-mRNA-1:cds;Parent=Msa1027630-mRNA-1 |
| chr7_1 | CDS | 60104217 | 60104285 | 60104217 | ID=Msa1027630-mRNA-1:cds;Parent=Msa1027630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
