AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1240210


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1240210 MtrunA17_Chr8g0352241 84.524 252 10 3 1 227 1 248 3.02e-142 397
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1240210 AT4G15030.1 54.225 284 64 5 1 227 1 275 2.75e-94 277
Msa1240210 AT4G15030.2 53.125 288 65 6 1 227 1 279 4.13e-91 270
Msa1240210 AT4G15030.3 53.125 288 65 6 1 227 1 279 4.13e-91 270

Find 67 sgRNAs with CRISPR-Local

Find 393 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTTCTCTCTTCACTTTCT+TGG 0.103766 8_2:-22631822 None:intergenic
AAGGAGCTACGATCAGATTT+TGG 0.151297 8_2:-22626186 None:intergenic
TTATCATATGTTTGTAATTT+AGG 0.183093 8_2:-22632686 None:intergenic
GTGCCTACAGTTAGTTTCTA+TGG 0.197234 8_2:+22627672 Msa1240210:intron
AACAAAGGTTTGAGATTTAT+TGG 0.205401 8_2:-22626162 None:intergenic
GCTAGTTGAAAATTTGTAAA+AGG 0.233730 8_2:+22626016 Msa1240210:five_prime_UTR
CGAAGAGAGGATTGCGAAAC+TGG 0.237898 8_2:+22626109 Msa1240210:five_prime_UTR
TATCAGGCTTTAATAAAATA+TGG 0.246167 8_2:+22632941 Msa1240210:three_prime_UTR
AGTAAATTTATCCATTTATC+AGG 0.248320 8_2:+22632925 Msa1240210:three_prime_UTR
CAAACAAGCTCTAGTTAAAT+TGG 0.261931 8_2:+22630556 Msa1240210:CDS
AATTTCATAACTGCATTAAT+AGG 0.277094 8_2:-22632850 None:intergenic
GAAGAATCTGCTACATGTTC+TGG 0.308849 8_2:+22632882 Msa1240210:three_prime_UTR
TGAAAATTTGTAAAAGGATA+AGG 0.316540 8_2:+22626022 Msa1240210:five_prime_UTR
TTGTAATTGCAGACAGTATC+AGG 0.337345 8_2:+22626346 Msa1240210:intron
GAGCTGGTAAACATGGAAAA+AGG 0.365567 8_2:+22632623 Msa1240210:three_prime_UTR
GAAAATTTGTAAAAGGATAA+GGG 0.391098 8_2:+22626023 Msa1240210:five_prime_UTR
ACAAAGGTTTGAGATTTATT+GGG 0.407887 8_2:-22626161 None:intergenic
ACACGCTAAGAGAGGGATAT+AGG 0.410948 8_2:+22627745 Msa1240210:CDS
CTAAAATTGCTTAATATACT+AGG 0.424715 8_2:+22632770 Msa1240210:three_prime_UTR
ATAGGCAACTTTAAGGTTGA+AGG 0.433714 8_2:-22627708 None:intergenic
AGTGAAGAGAGAAGGAGAAA+AGG 0.434606 8_2:+22631829 Msa1240210:CDS
ACCAGCCTTTGCTCCCATGA+TGG 0.442891 8_2:-22628431 None:intergenic
TCATTCACCATGACATCGTT+GGG 0.455151 8_2:+22626211 Msa1240210:exon
TTCGAAGAGTGATGATGATC+TGG 0.455182 8_2:+22631792 Msa1240210:CDS
ACGGTCAGAGGAAGATGATA+TGG 0.473518 8_2:+22628406 Msa1240210:CDS
TGCCTACAGTTAGTTTCTAT+GGG 0.476952 8_2:+22627673 Msa1240210:intron
TTCATTCACCATGACATCGT+TGG 0.490206 8_2:+22626210 Msa1240210:exon
AAGCATTGCAATGAGAAAGA+TGG 0.492067 8_2:+22629947 Msa1240210:CDS
AACATAGACGAGTTTCTTGA+GGG 0.498571 8_2:+22632539 Msa1240210:CDS
AATGTGTTGCAAGATTTATA+CGG 0.500196 8_2:+22628387 Msa1240210:intron
TCCATCATGGGAGCAAAGGC+TGG 0.509246 8_2:+22628430 Msa1240210:CDS
AAGATGATATGGATCCATCA+TGG 0.516160 8_2:+22628417 Msa1240210:CDS
ACAGAGAAGGAAGTCATGTC+TGG 0.518399 8_2:+22629321 Msa1240210:CDS
CAAAGGTTTGAGATTTATTG+GGG 0.529267 8_2:-22626160 None:intergenic
CAGTATCAGGCTCATATTCG+AGG 0.531781 8_2:+22626359 Msa1240210:CDS
ATGTAGCAGATTCTTCTACT+TGG 0.539283 8_2:-22632875 None:intergenic
GATGTCATGGTGAATGAAGA+AGG 0.541902 8_2:-22626205 None:intergenic
AGAAAGAAGACAACAAAAGC+TGG 0.545344 8_2:+22631660 Msa1240210:CDS
TGGATCCATCATGGGAGCAA+AGG 0.551016 8_2:+22628426 Msa1240210:CDS
GCATTTCTTGAGACAAGAGC+TGG 0.553229 8_2:+22632607 Msa1240210:three_prime_UTR
GAGACAAGAGCTGGTAAACA+TGG 0.557097 8_2:+22632616 Msa1240210:three_prime_UTR
TAGGCAGTGCTGGGAGCAAG+TGG 0.564184 8_2:+22632647 Msa1240210:three_prime_UTR
TTTAGTGTCAACAAGTTCGA+AGG 0.565832 8_2:-22632752 None:intergenic
GCCAAGAAAGTGAAGAGAGA+AGG 0.566074 8_2:+22631821 Msa1240210:CDS
TAACATAGACGAGTTTCTTG+AGG 0.575423 8_2:+22632538 Msa1240210:CDS
CAGAGATCCCAACGATGTCA+TGG 0.577645 8_2:-22626218 None:intergenic
TGCAAGATTTATACGGTCAG+AGG 0.578191 8_2:+22628394 Msa1240210:intron
CTACAAGAGGCAGAAAGAGA+AGG 0.586951 8_2:+22631630 Msa1240210:CDS
CAGGGAAACTTAACTACAAG+AGG 0.589540 8_2:+22631617 Msa1240210:CDS
GAGTGATGATGATCTGGACG+AGG 0.591426 8_2:+22631798 Msa1240210:CDS
AGATGATATGGATCCATCAT+GGG 0.599854 8_2:+22628418 Msa1240210:CDS
AAGGTTTGAGATTTATTGGG+GGG 0.601439 8_2:-22626158 None:intergenic
CTCTTCTCTGTCGAATATCG+CGG 0.603692 8_2:-22626245 None:intergenic
TCAACTAGCACTTAAACGAG+TGG 0.605889 8_2:-22626002 None:intergenic
TGCTTAATATACTAGGCAGA+AGG 0.608974 8_2:+22632777 Msa1240210:three_prime_UTR
TGGGAGCAAGTGGATAATGC+AGG 0.609766 8_2:+22632657 Msa1240210:three_prime_UTR
TCTCAGATGGAGAACAGAGA+AGG 0.612843 8_2:+22629308 Msa1240210:CDS
AAGGAAGTCATGTCTGGCAA+AGG 0.614471 8_2:+22629327 Msa1240210:CDS
AGATAAAGACACGCTAAGAG+AGG 0.617719 8_2:+22627737 Msa1240210:CDS
AAAAGCTGGACAGAAGAAAG+AGG 0.623216 8_2:+22631674 Msa1240210:CDS
GATAAAGACACGCTAAGAGA+GGG 0.626505 8_2:+22627738 Msa1240210:CDS
ATTACAGGTCAGTTTATATG+CGG 0.641502 8_2:+22629920 Msa1240210:intron
TTAAATTGGTAGCATGTGAG+AGG 0.651772 8_2:+22630570 Msa1240210:CDS
AGTGATGATGATCTGGACGA+GGG 0.693469 8_2:+22631799 Msa1240210:CDS
AAAGGTTTGAGATTTATTGG+GGG 0.697684 8_2:-22626159 None:intergenic
ACATAGACGAGTTTCTTGAG+GGG 0.714392 8_2:+22632540 Msa1240210:CDS
AGATGGATTAGCAAGCTACG+AGG 0.761444 8_2:+22629964 Msa1240210:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTATTTTTTTTCTTTTT+TGG - chr8_2:22628185-22628204 None:intergenic 10.0%
!! AATAATAAAAGATATTCATA+TGG - chr8_2:22628283-22628302 None:intergenic 10.0%
!!! TATGAATATCTTTTATTATT+TGG + chr8_2:22628283-22628302 Msa1240210:intron 10.0%
!! TTTACTAAATATTTATATTG+AGG + chr8_2:22628506-22628525 Msa1240210:intron 10.0%
!! ACTAAAAAAAATATATTATG+GGG - chr8_2:22629215-22629234 None:intergenic 10.0%
!! GACTAAAAAAAATATATTAT+GGG - chr8_2:22629216-22629235 None:intergenic 10.0%
!! AGACTAAAAAAAATATATTA+TGG - chr8_2:22629217-22629236 None:intergenic 10.0%
!!! AAAACAAAACCTAATTTTTT+TGG + chr8_2:22626080-22626099 Msa1240210:five_prime_UTR 15.0%
!! AAACAGGAAAAAATAAAAAA+TGG - chr8_2:22627023-22627042 None:intergenic 15.0%
!!! ATTTTTTATTTTTTCCTGTT+TGG + chr8_2:22627022-22627041 Msa1240210:intron 15.0%
!!! TTTTTTATTTTTTCCTGTTT+GGG + chr8_2:22627023-22627042 Msa1240210:intron 15.0%
!!! TAATAGATACAATTTGTTAA+TGG + chr8_2:22627257-22627276 Msa1240210:intron 15.0%
!!! AATAGATACAATTTGTTAAT+GGG + chr8_2:22627258-22627277 Msa1240210:intron 15.0%
!!! ACAACTTTTATATATTTTTC+AGG + chr8_2:22628690-22628709 Msa1240210:intron 15.0%
!!! TTTTATATATTTTTCAGGAT+TGG + chr8_2:22628695-22628714 Msa1240210:intron 15.0%
!!! TTTATATATTTTTCAGGATT+GGG + chr8_2:22628696-22628715 Msa1240210:intron 15.0%
!! CAAAATTTATACATTGTTTA+TGG + chr8_2:22628747-22628766 Msa1240210:intron 15.0%
!! TATCACATAAGTATAAAATA+GGG - chr8_2:22628824-22628843 None:intergenic 15.0%
!! ATATCACATAAGTATAAAAT+AGG - chr8_2:22628825-22628844 None:intergenic 15.0%
!!! ATTTTATACTTATGTGATAT+TGG + chr8_2:22628825-22628844 Msa1240210:intron 15.0%
!! TTATGAAGATGATTAAAAAT+TGG - chr8_2:22629698-22629717 None:intergenic 15.0%
!! ATTAAAAGTTAAAACATTTC+TGG + chr8_2:22631017-22631036 Msa1240210:intron 15.0%
!!! TATTTTCTATTTTTGAATGA+AGG - chr8_2:22631091-22631110 None:intergenic 15.0%
!! AGATTTAATTAAACTAATAC+AGG - chr8_2:22631161-22631180 None:intergenic 15.0%
!! AAATTACAAAAACAGATTTA+TGG - chr8_2:22631296-22631315 None:intergenic 15.0%
!! TAATAGTTAACTTAAATGTT+TGG + chr8_2:22632372-22632391 Msa1240210:intron 15.0%
!! TGAAAATACATGTTAATTAA+AGG - chr8_2:22632453-22632472 None:intergenic 15.0%
!!! TTTAATTAACATGTATTTTC+AGG + chr8_2:22632452-22632471 Msa1240210:intron 15.0%
!! TTATCATATGTTTGTAATTT+AGG - chr8_2:22632689-22632708 None:intergenic 15.0%
!! TGAAAATTTGTAAAAGGATA+AGG + chr8_2:22626022-22626041 Msa1240210:five_prime_UTR 20.0%
!! GAAAATTTGTAAAAGGATAA+GGG + chr8_2:22626023-22626042 Msa1240210:five_prime_UTR 20.0%
!! AAAAAGTTTATCAACGATTA+CGG + chr8_2:22626404-22626423 Msa1240210:CDS 20.0%
!!! CAATTTTCTTCTAAATAAGT+TGG + chr8_2:22626758-22626777 Msa1240210:intron 20.0%
!! ACAATAGGATTAATCAAATT+TGG + chr8_2:22627051-22627070 Msa1240210:intron 20.0%
!!! ATTTTTCTATTTCTAAGCAA+AGG - chr8_2:22628103-22628122 None:intergenic 20.0%
!! TTTGCTTAGAAATAGAAAAA+TGG + chr8_2:22628102-22628121 Msa1240210:intron 20.0%
!! TTGCTTAGAAATAGAAAAAT+GGG + chr8_2:22628103-22628122 Msa1240210:intron 20.0%
!!! TTATTATGCTAAGCTTTTTA+AGG + chr8_2:22628460-22628479 Msa1240210:intron 20.0%
!! GTAAAAAAATAATTGTGCAA+AGG - chr8_2:22628491-22628510 None:intergenic 20.0%
!!! CACTATTTTTGTTAAAAACA+TGG - chr8_2:22628638-22628657 None:intergenic 20.0%
!!! TGTTTTTATAGTCTATTACT+AGG + chr8_2:22628656-22628675 Msa1240210:intron 20.0%
!!! ATAAAATAGGGTGATATTTT+TGG - chr8_2:22628812-22628831 None:intergenic 20.0%
!! TATGCAGATTATATCTTTAA+AGG + chr8_2:22629249-22629268 Msa1240210:intron 20.0%
!!! AATTGCATATTTTTGTAGAT+TGG + chr8_2:22629285-22629304 Msa1240210:intron 20.0%
!!! AAATAGTTCTAGTTAAACAT+GGG - chr8_2:22629409-22629428 None:intergenic 20.0%
!!! TTCAAAAAACAAATGCTTTT+TGG + chr8_2:22629427-22629446 Msa1240210:intron 20.0%
!! AAATAGAAGATGTAAACTAT+GGG - chr8_2:22629606-22629625 None:intergenic 20.0%
!! ATAGATTGATTAATGGTAAT+GGG - chr8_2:22630002-22630021 None:intergenic 20.0%
!! AATAGATTGATTAATGGTAA+TGG - chr8_2:22630003-22630022 None:intergenic 20.0%
!! TAGTCAAATAGATTGATTAA+TGG - chr8_2:22630009-22630028 None:intergenic 20.0%
!! AGATATAGCGTAAATTATAT+TGG + chr8_2:22630150-22630169 Msa1240210:intron 20.0%
!!! AATGCATTATGCTATTTATT+AGG + chr8_2:22630231-22630250 Msa1240210:intron 20.0%
!! TATTAATTGAGTTTGTGATA+TGG + chr8_2:22630332-22630351 Msa1240210:intron 20.0%
!! ATTTGAACACATCTAATTTA+AGG + chr8_2:22630883-22630902 Msa1240210:intron 20.0%
!! TTTGAACACATCTAATTTAA+GGG + chr8_2:22630884-22630903 Msa1240210:intron 20.0%
!! TAATAATAAGACATTTCCAA+AGG - chr8_2:22631001-22631020 None:intergenic 20.0%
!! AACAACTAGTAATATTATTG+AGG - chr8_2:22631209-22631228 None:intergenic 20.0%
!! CAAATTACAAAAATAGTACA+TGG - chr8_2:22631270-22631289 None:intergenic 20.0%
!! AAAATCACAAAAATAGTATG+TGG - chr8_2:22631319-22631338 None:intergenic 20.0%
!!! TGTTCATTTGAAGATTATTT+TGG + chr8_2:22631432-22631451 Msa1240210:intron 20.0%
!!! GTAATCTCAATTTTGTAAAA+AGG - chr8_2:22631463-22631482 None:intergenic 20.0%
!! AACCAATAAATAAATGAAAC+CGG - chr8_2:22631581-22631600 None:intergenic 20.0%
!! AATCAAAATGCTAAAATAAC+CGG - chr8_2:22631940-22631959 None:intergenic 20.0%
!!! AACAGATTAGTTAAAAATCA+GGG - chr8_2:22632572-22632591 None:intergenic 20.0%
!! CTAAAATTGCTTAATATACT+AGG + chr8_2:22632770-22632789 Msa1240210:three_prime_UTR 20.0%
!! AATTTCATAACTGCATTAAT+AGG - chr8_2:22632853-22632872 None:intergenic 20.0%
!! AGTAAATTTATCCATTTATC+AGG + chr8_2:22632925-22632944 Msa1240210:three_prime_UTR 20.0%
!!! TTTTATTAAAGCCTGATAAA+TGG - chr8_2:22632939-22632958 None:intergenic 20.0%
!!! TATCAGGCTTTAATAAAATA+TGG + chr8_2:22632941-22632960 Msa1240210:three_prime_UTR 20.0%
!! ACAAAAAATGTCTGATTATT+TGG + chr8_2:22632974-22632993 Msa1240210:three_prime_UTR 20.0%
! GCTAGTTGAAAATTTGTAAA+AGG + chr8_2:22626016-22626035 Msa1240210:five_prime_UTR 25.0%
!!! AAATTAGGTTTTGTTTTTGC+TGG - chr8_2:22626077-22626096 None:intergenic 25.0%
! TCGATTCTACCAAAAAAATT+AGG - chr8_2:22626092-22626111 None:intergenic 25.0%
!! ACAAAGGTTTGAGATTTATT+GGG - chr8_2:22626164-22626183 None:intergenic 25.0%
!! AACAAAGGTTTGAGATTTAT+TGG - chr8_2:22626165-22626184 None:intergenic 25.0%
!!! AATCGTTGATAAACTTTTTG+TGG - chr8_2:22626403-22626422 None:intergenic 25.0%
! ATTACAGTAACCAATGAAAT+CGG - chr8_2:22626519-22626538 None:intergenic 25.0%
! GAAAACATCTTACAACTTAT+AGG - chr8_2:22626607-22626626 None:intergenic 25.0%
!! GATGTTTTCATAAGCTATTT+TGG + chr8_2:22626618-22626637 Msa1240210:intron 25.0%
! TTCAAATAAGTCAATCCTAA+TGG + chr8_2:22626718-22626737 Msa1240210:intron 25.0%
! ATAAATGATAAGTGTCCATT+AGG - chr8_2:22626736-22626755 None:intergenic 25.0%
!!! TTTCTTCTAAATAAGTTGGT+TGG + chr8_2:22626762-22626781 Msa1240210:intron 25.0%
!!! TGATATTCGAACTGTTTTTT+TGG + chr8_2:22626994-22627013 Msa1240210:intron 25.0%
!! CAAATTTGGAGATATTGATT+TGG + chr8_2:22627065-22627084 Msa1240210:intron 25.0%
! AAAAACAAAAATGACATGCA+CGG - chr8_2:22627197-22627216 None:intergenic 25.0%
! AAATCTTTCTGTTCTTGAAT+TGG - chr8_2:22627232-22627251 None:intergenic 25.0%
!!! ATAAAAGTCCTTTTTCAATG+TGG - chr8_2:22627428-22627447 None:intergenic 25.0%
! TTAATCTCAGAAGAATTCAT+CGG - chr8_2:22627646-22627665 None:intergenic 25.0%
!!! TGTTTTAATAGGCAACTTTA+AGG - chr8_2:22627718-22627737 None:intergenic 25.0%
!!! GTGTCTTTATCTGTTTTAAT+AGG - chr8_2:22627729-22627748 None:intergenic 25.0%
! GGAAAAATAAGACAATATTG+AGG - chr8_2:22627830-22627849 None:intergenic 25.0%
! CAAGTTTCTTGTAATAAAAG+AGG - chr8_2:22627851-22627870 None:intergenic 25.0%
! TACTGGTATTAAAAAGAAGA+TGG - chr8_2:22627934-22627953 None:intergenic 25.0%
!!! GATCTTTGGTGTATTTTATT+TGG + chr8_2:22628060-22628079 Msa1240210:intron 25.0%
! AAAAATAAAACAGAACCCTA+AGG + chr8_2:22628194-22628213 Msa1240210:intron 25.0%
! TATAAATCTTGCAACACATT+TGG - chr8_2:22628387-22628406 None:intergenic 25.0%
! AATGTGTTGCAAGATTTATA+CGG + chr8_2:22628387-22628406 Msa1240210:intron 25.0%
!!! ATTTGCCCAATTTTGTTTAT+TGG + chr8_2:22628784-22628803 Msa1240210:intron 25.0%
!!! TTTGCCCAATTTTGTTTATT+GGG + chr8_2:22628785-22628804 Msa1240210:intron 25.0%
!!! TTGGGTTTTGATTATAGATT+TGG + chr8_2:22628850-22628869 Msa1240210:intron 25.0%
!! ATAGATTTGGTTGAATTAGT+TGG + chr8_2:22628863-22628882 Msa1240210:intron 25.0%
!! TCTAAAATGGCTTATATGAA+AGG + chr8_2:22628973-22628992 Msa1240210:intron 25.0%
! CAGTATCTTAAAAGGATTTA+AGG - chr8_2:22629068-22629087 None:intergenic 25.0%
!!! GCATTTAGAATATTTTTTCG+TGG + chr8_2:22629136-22629155 Msa1240210:intron 25.0%
! CAAGGTTCAAAATTACTAAA+AGG - chr8_2:22629178-22629197 None:intergenic 25.0%
!!! GAAATAGTTCTAGTTAAACA+TGG - chr8_2:22629410-22629429 None:intergenic 25.0%
! TTCTCCCACAAAAAAAAAAA+AGG + chr8_2:22629528-22629547 Msa1240210:intron 25.0%
!!! CCATCCTTTTTTTTTTTTGT+GGG - chr8_2:22629535-22629554 None:intergenic 25.0%
!!! ACCATCCTTTTTTTTTTTTG+TGG - chr8_2:22629536-22629555 None:intergenic 25.0%
! GAAATAGAAGATGTAAACTA+TGG - chr8_2:22629607-22629626 None:intergenic 25.0%
! TATAACAAATTAAAGACAGC+TGG - chr8_2:22629855-22629874 None:intergenic 25.0%
! CGTTAACTTCAAAATTGAAT+AGG - chr8_2:22629889-22629908 None:intergenic 25.0%
! AACGTTTCACATAATATTAC+AGG + chr8_2:22629905-22629924 Msa1240210:intron 25.0%
! TTAAAGTTAACCCAATCAAA+AGG + chr8_2:22630051-22630070 Msa1240210:intron 25.0%
! TAAAGTTAACCCAATCAAAA+GGG + chr8_2:22630052-22630071 Msa1240210:intron 25.0%
!! GTTTTTCCTAATGTTTTCTA+CGG - chr8_2:22630088-22630107 None:intergenic 25.0%
! GATCATCAGAAATTATAGTA+AGG - chr8_2:22630123-22630142 None:intergenic 25.0%
! AAGCAAATAGAATAAAAGAG+TGG - chr8_2:22630494-22630513 None:intergenic 25.0%
!!! AACTTTTGTTATTTTGAAGC+AGG + chr8_2:22630527-22630546 Msa1240210:CDS 25.0%
!!! ATCAGTTGATGAAGAAATTA+AGG + chr8_2:22630681-22630700 Msa1240210:intron 25.0%
! AAACATTTAACAAATATGGC+AGG - chr8_2:22630821-22630840 None:intergenic 25.0%
! GAGCAAACATTTAACAAATA+TGG - chr8_2:22630825-22630844 None:intergenic 25.0%
! TTATATACAATAACCAGAAG+AGG - chr8_2:22630847-22630866 None:intergenic 25.0%
! TTGATTATATCATTATCACC+TGG + chr8_2:22630954-22630973 Msa1240210:intron 25.0%
!! AATATGATAATGTATGTTCG+TGG + chr8_2:22631107-22631126 Msa1240210:intron 25.0%
! ACAAAAATAGTACATGGAAA+TGG - chr8_2:22631264-22631283 None:intergenic 25.0%
! AAAAACCTTAATGACTTGAA+AGG - chr8_2:22631510-22631529 None:intergenic 25.0%
! TTAAATAATTGAAGGTTGTC+AGG + chr8_2:22631544-22631563 Msa1240210:intron 25.0%
! TTCCGGTTTCATTTATTTAT+TGG + chr8_2:22631576-22631595 Msa1240210:intron 25.0%
!! TTATTTTCAATAGATGTGCA+GGG + chr8_2:22631599-22631618 Msa1240210:intron 25.0%
! AATAAGAGGAAAATAAGAAG+GGG - chr8_2:22631729-22631748 None:intergenic 25.0%
! CAATAAGAGGAAAATAAGAA+GGG - chr8_2:22631730-22631749 None:intergenic 25.0%
! TCAATAAGAGGAAAATAAGA+AGG - chr8_2:22631731-22631750 None:intergenic 25.0%
!! ACGTATTTTCATTCAATAAG+AGG - chr8_2:22631743-22631762 None:intergenic 25.0%
! TGATGTAAAATAGCCATAAA+AGG - chr8_2:22631864-22631883 None:intergenic 25.0%
!!! TTTTATGGCTATTTTACATC+AGG + chr8_2:22631863-22631882 Msa1240210:intron 25.0%
!! GATATGAAACTCTGTATTTT+CGG + chr8_2:22631885-22631904 Msa1240210:intron 25.0%
!! CTAGTTCTTACTAAAAGAAA+CGG - chr8_2:22632055-22632074 None:intergenic 25.0%
!! TGTATTTGCATCTTTTGTAA+TGG + chr8_2:22632178-22632197 Msa1240210:intron 25.0%
! ACAATGTTTCACATCATAAT+AGG - chr8_2:22632240-22632259 None:intergenic 25.0%
! AAAACATTTCCTAGTAGTAT+TGG - chr8_2:22632266-22632285 None:intergenic 25.0%
!! AATGTTTTATATGCCAACAA+TGG + chr8_2:22632278-22632297 Msa1240210:intron 25.0%
!! ATGTTTTATATGCCAACAAT+GGG + chr8_2:22632279-22632298 Msa1240210:intron 25.0%
!! ATCATCAATTTTATGATCAC+TGG - chr8_2:22632498-22632517 None:intergenic 25.0%
!! CAACAGATTAGTTAAAAATC+AGG - chr8_2:22632573-22632592 None:intergenic 25.0%
!!! TTTGTTTTTGCTGGTTATAC+AGG - chr8_2:22626068-22626087 None:intergenic 30.0%
! AAAGGTTTGAGATTTATTGG+GGG - chr8_2:22626162-22626181 None:intergenic 30.0%
! CAAAGGTTTGAGATTTATTG+GGG - chr8_2:22626163-22626182 None:intergenic 30.0%
GATTTATCGAAGAATGAATG+AGG - chr8_2:22626305-22626324 None:intergenic 30.0%
ATGAGAAACAGAAACAAGTT+AGG - chr8_2:22626327-22626346 None:intergenic 30.0%
!! TGTTTTTGAACCGATTTCAT+TGG + chr8_2:22626506-22626525 Msa1240210:intron 30.0%
ACTTATTTGAACTTCTCAAC+TGG - chr8_2:22626709-22626728 None:intergenic 30.0%
AACTTATAAGCTCTCTCAAA+CGG + chr8_2:22626900-22626919 Msa1240210:intron 30.0%
!!! TATTTTTTCCTGTTTGGGAA+TGG + chr8_2:22627028-22627047 Msa1240210:intron 30.0%
!! TTTGGAGATATTGATTTGGT+TGG + chr8_2:22627069-22627088 Msa1240210:intron 30.0%
TCTTAATGTCCTACAGTAAA+TGG + chr8_2:22627092-22627111 Msa1240210:intron 30.0%
!! ATGCTTATATTGGTTTCCTA+CGG + chr8_2:22627293-22627312 Msa1240210:intron 30.0%
!! TTTTGATTCAAATGACCTTC+AGG + chr8_2:22627392-22627411 Msa1240210:intron 30.0%
ATCTTGCCATATGTATGATA+AGG + chr8_2:22627778-22627797 Msa1240210:intron 30.0%
AAATTGTACTATGACACCAA+AGG - chr8_2:22627984-22628003 None:intergenic 30.0%
! CTGATTTTTCTCTTATAGCA+AGG - chr8_2:22628040-22628059 None:intergenic 30.0%
! CTTGCTATAAGAGAAAAATC+AGG + chr8_2:22628038-22628057 Msa1240210:intron 30.0%
AAGAGAAAAATCAGGATCTT+TGG + chr8_2:22628046-22628065 Msa1240210:intron 30.0%
ATTTCAATAGTCATGCCTTA+GGG - chr8_2:22628212-22628231 None:intergenic 30.0%
TCAACATTTGCTCAATTTCT+AGG - chr8_2:22628581-22628600 None:intergenic 30.0%
TGGTCCCAATAAACAAAATT+GGG - chr8_2:22628792-22628811 None:intergenic 30.0%
TTGGTCCCAATAAACAAAAT+TGG - chr8_2:22628793-22628812 None:intergenic 30.0%
TACTTATGTGATATTGGCAT+TGG + chr8_2:22628831-22628850 Msa1240210:intron 30.0%
ACTTATGTGATATTGGCATT+GGG + chr8_2:22628832-22628851 Msa1240210:intron 30.0%
! AATCCATTAGCTCTTACATA+CGG - chr8_2:22628895-22628914 None:intergenic 30.0%
! AAGCTCTGTTTACTAGATTT+TGG + chr8_2:22628931-22628950 Msa1240210:intron 30.0%
GATGGTAATTGTGAGTTTAA+TGG - chr8_2:22629503-22629522 None:intergenic 30.0%
CCCACAAAAAAAAAAAAGGA+TGG + chr8_2:22629532-22629551 Msa1240210:intron 30.0%
TGTAAACTATGGGATTCATA+CGG - chr8_2:22629596-22629615 None:intergenic 30.0%
! ATTTAAAACTCAACTCTTGC+AGG + chr8_2:22629734-22629753 Msa1240210:intron 30.0%
GACAGGTAAGTGAAAAATAT+AGG - chr8_2:22629803-22629822 None:intergenic 30.0%
ATTACAGGTCAGTTTATATG+CGG + chr8_2:22629920-22629939 Msa1240210:intron 30.0%
AATTATAGTAAGGTTCTTCC+TGG - chr8_2:22630113-22630132 None:intergenic 30.0%
ATCACATTTACATGAAACAC+TGG - chr8_2:22630281-22630300 None:intergenic 30.0%
AGAATAAAAGAGTGGAAACA+TGG - chr8_2:22630486-22630505 None:intergenic 30.0%
TTCTATTTGCTTCATGTTAC+AGG + chr8_2:22630502-22630521 Msa1240210:intron 30.0%
! CAAACAAGCTCTAGTTAAAT+TGG + chr8_2:22630556-22630575 Msa1240210:CDS 30.0%
ATGGATTCAGAAGAAAACAA+TGG - chr8_2:22630635-22630654 None:intergenic 30.0%
GTGTACCAATAACAAATCAT+CGG + chr8_2:22630717-22630736 Msa1240210:intron 30.0%
!! ATACACCGATGATTTGTTAT+TGG - chr8_2:22630725-22630744 None:intergenic 30.0%
AAAGTTCTTGTTAGTTGCAT+GGG + chr8_2:22630928-22630947 Msa1240210:intron 30.0%
!!! GCATATACTGATTTTTTTCC+AGG - chr8_2:22630975-22630994 None:intergenic 30.0%
! GTGATTTTTAATGATTGCCT+TGG + chr8_2:22631331-22631350 Msa1240210:intron 30.0%
TGTAAATTCAAATTCGTCCA+AGG - chr8_2:22631351-22631370 None:intergenic 30.0%
CAAATGAACACATAAATAGC+AGG - chr8_2:22631422-22631441 None:intergenic 30.0%
ATTGAGATTACTCATCACTT+TGG + chr8_2:22631472-22631491 Msa1240210:intron 30.0%
TTGTCAGGTAAATCAAATTC+CGG + chr8_2:22631559-22631578 Msa1240210:intron 30.0%
!! GTTATTTTCAATAGATGTGC+AGG + chr8_2:22631598-22631617 Msa1240210:intron 30.0%
ATAAGAGGAAAATAAGAAGG+GGG - chr8_2:22631728-22631747 None:intergenic 30.0%
GATTGAATCCTTTCAATTGT+AGG + chr8_2:22631764-22631783 Msa1240210:intron 30.0%
!! AAGGTTTGAAGTTCCTTTTA+TGG + chr8_2:22631848-22631867 Msa1240210:intron 30.0%
!!! TCATCATTTGTTTTTGTTGC+AGG + chr8_2:22631909-22631928 Msa1240210:intron 30.0%
! CGTTTCTTTTAGTAAGAACT+AGG + chr8_2:22632053-22632072 Msa1240210:intron 30.0%
! TCTTTTAGTAAGAACTAGGA+AGG + chr8_2:22632057-22632076 Msa1240210:intron 30.0%
GCACTTATCATTGTAAATCT+AGG - chr8_2:22632083-22632102 None:intergenic 30.0%
! TAGTAGTCTTACAAGTATGT+TGG + chr8_2:22632140-22632159 Msa1240210:intron 30.0%
CATTGTTTACCAATACTACT+AGG + chr8_2:22632254-22632273 Msa1240210:intron 30.0%
AGTTCATAGCAGTAAATGTT+AGG - chr8_2:22632427-22632446 None:intergenic 30.0%
!! AACATGTATTTTCAGGAAAG+AGG + chr8_2:22632459-22632478 Msa1240210:intron 30.0%
!! ACATGTATTTTCAGGAAAGA+GGG + chr8_2:22632460-22632479 Msa1240210:intron 30.0%
!!! AAGAAATGCTTTTCAGGTAA+TGG - chr8_2:22632596-22632615 None:intergenic 30.0%
!! TTTTGCTGGTTATACAGGTA+AGG - chr8_2:22626063-22626082 None:intergenic 35.0%
!! TTTTTGGTAGAATCGAAGAG+AGG + chr8_2:22626096-22626115 Msa1240210:five_prime_UTR 35.0%
! AAGGTTTGAGATTTATTGGG+GGG - chr8_2:22626161-22626180 None:intergenic 35.0%
TATCGAAGAATGAATGAGGA+GGG - chr8_2:22626301-22626320 None:intergenic 35.0%
TTATCGAAGAATGAATGAGG+AGG - chr8_2:22626302-22626321 None:intergenic 35.0%
TTGTAATTGCAGACAGTATC+AGG + chr8_2:22626346-22626365 Msa1240210:intron 35.0%
!!! AAGCTATTTTGGTGAGCTTA+TGG + chr8_2:22626629-22626648 Msa1240210:intron 35.0%
GTTCATCATCCATTTACTGT+AGG - chr8_2:22627104-22627123 None:intergenic 35.0%
ATGAACAGTCTTCTCCATTA+AGG + chr8_2:22627118-22627137 Msa1240210:intron 35.0%
AGTCTTCTCCATTAAGGAAA+AGG + chr8_2:22627124-22627143 Msa1240210:intron 35.0%
TTCTCCATTAAGGAAAAGGA+AGG + chr8_2:22627128-22627147 Msa1240210:intron 35.0%
TCTTTCTGTTCTTGAATTGG+TGG - chr8_2:22627229-22627248 None:intergenic 35.0%
!! TTTGTTAATGGGTTTGTGAC+TGG + chr8_2:22627269-22627288 Msa1240210:intron 35.0%
!! TTGTTAATGGGTTTGTGACT+GGG + chr8_2:22627270-22627289 Msa1240210:intron 35.0%
TTCAAATGACCTTCAGGATT+TGG + chr8_2:22627398-22627417 Msa1240210:intron 35.0%
ATGTCAGAATCAGATTTCCA+TGG + chr8_2:22627573-22627592 Msa1240210:intron 35.0%
! TGCCTACAGTTAGTTTCTAT+GGG + chr8_2:22627673-22627692 Msa1240210:intron 35.0%
TTCCCATAGAAACTAACTGT+AGG - chr8_2:22627678-22627697 None:intergenic 35.0%
!! ATAGGCAACTTTAAGGTTGA+AGG - chr8_2:22627711-22627730 None:intergenic 35.0%
TGCCATATGTATGATAAGGA+TGG + chr8_2:22627782-22627801 Msa1240210:intron 35.0%
CACCATCCTTATCATACATA+TGG - chr8_2:22627787-22627806 None:intergenic 35.0%
GATTTCAATAGTCATGCCTT+AGG - chr8_2:22628213-22628232 None:intergenic 35.0%
TCCTAAAAGGATCTTCAGTA+GGG - chr8_2:22628256-22628275 None:intergenic 35.0%
TTCATATGGAAGCTCCTAAA+AGG - chr8_2:22628269-22628288 None:intergenic 35.0%
AGTTGAGAGAAAAGATGGTA+AGG - chr8_2:22628328-22628347 None:intergenic 35.0%
! AGACAAGTTGAGAGAAAAGA+TGG - chr8_2:22628333-22628352 None:intergenic 35.0%
AAGATGATATGGATCCATCA+TGG + chr8_2:22628417-22628436 Msa1240210:CDS 35.0%
AGATGATATGGATCCATCAT+GGG + chr8_2:22628418-22628437 Msa1240210:CDS 35.0%
GATACAAGTAACGCTAACAA+AGG - chr8_2:22628551-22628570 None:intergenic 35.0%
GTTAGCGTTACTTGTATCTT+TGG + chr8_2:22628553-22628572 Msa1240210:intron 35.0%
! GATTTGGTTGAATTAGTTGG+AGG + chr8_2:22628866-22628885 Msa1240210:intron 35.0%
AATCCGTATGTAAGAGCTAA+TGG + chr8_2:22628889-22628908 Msa1240210:intron 35.0%
CAGCAAGACAGTATCTTAAA+AGG - chr8_2:22629076-22629095 None:intergenic 35.0%
!!! TTTTGTAGATTGGTCTCAGA+TGG + chr8_2:22629295-22629314 Msa1240210:intron 35.0%
CATAACCAAGCAAAACTAGT+CGG - chr8_2:22629370-22629389 None:intergenic 35.0%
TCTAGTTAAACATGGGATGA+AGG - chr8_2:22629402-22629421 None:intergenic 35.0%
! TTTTGTGGGAGAAAAACAGA+TGG - chr8_2:22629521-22629540 None:intergenic 35.0%
! TTCCTTGTCATTTCCTATGA+TGG + chr8_2:22629624-22629643 Msa1240210:intron 35.0%
! AATATCTTGGTGACCATCAT+AGG - chr8_2:22629640-22629659 None:intergenic 35.0%
TCTGACAGTCTCAAATATCT+TGG - chr8_2:22629653-22629672 None:intergenic 35.0%
TGCAACAATGCAGTTAGAAT+AGG - chr8_2:22629825-22629844 None:intergenic 35.0%
! AAGCATTGCAATGAGAAAGA+TGG + chr8_2:22629947-22629966 Msa1240210:CDS 35.0%
!! ATTTGACTAGTCTGTTAGAG+AGG + chr8_2:22630020-22630039 Msa1240210:intron 35.0%
!! TTTGACTAGTCTGTTAGAGA+GGG + chr8_2:22630021-22630040 Msa1240210:intron 35.0%
AGAAGACCGTAGAAAACATT+AGG + chr8_2:22630079-22630098 Msa1240210:intron 35.0%
AAACATTAGGAAAAACCACC+AGG + chr8_2:22630092-22630111 Msa1240210:intron 35.0%
!!! GCTGTTGTTTGTCTTGTTTT+AGG + chr8_2:22630208-22630227 Msa1240210:intron 35.0%
ATTAACTTCAGCTCTTCTTG+AGG + chr8_2:22630428-22630447 Msa1240210:intron 35.0%
TTAACTTCAGCTCTTCTTGA+GGG + chr8_2:22630429-22630448 Msa1240210:intron 35.0%
! TTAAATTGGTAGCATGTGAG+AGG + chr8_2:22630570-22630589 Msa1240210:CDS 35.0%
TTCAGAAGAAAACAATGGCA+CGG - chr8_2:22630630-22630649 None:intergenic 35.0%
AATCCATATCCTCTAGTGAA+GGG + chr8_2:22630648-22630667 Msa1240210:intron 35.0%
ACATTCTACAATTCTCCTTC+TGG + chr8_2:22630786-22630805 Msa1240210:intron 35.0%
TTAAATGTTTGCTCCTCTTC+TGG + chr8_2:22630831-22630850 Msa1240210:intron 35.0%
AACTAACAAGAACTTTGCAC+GGG - chr8_2:22630924-22630943 None:intergenic 35.0%
CAACTAACAAGAACTTTGCA+CGG - chr8_2:22630925-22630944 None:intergenic 35.0%
CAAAGTTCTTGTTAGTTGCA+TGG + chr8_2:22630927-22630946 Msa1240210:intron 35.0%
AATCAGTATATGCTGACCTT+TGG + chr8_2:22630982-22631001 Msa1240210:intron 35.0%
TAATTTCTGTAGTCTGTCTC+TGG + chr8_2:22631053-22631072 Msa1240210:intron 35.0%
TCCTGAATGTCAAAGCATAT+TGG - chr8_2:22631382-22631401 None:intergenic 35.0%
! TGTCTCCTTTCAAGTCATTA+AGG + chr8_2:22631502-22631521 Msa1240210:intron 35.0%
AGAAAGAAGACAACAAAAGC+TGG + chr8_2:22631660-22631679 Msa1240210:CDS 35.0%
GTTTCACATCATAATAGGCA+AGG - chr8_2:22632235-22632254 None:intergenic 35.0%
! TCAGCTTTTAAGCATGATCA+TGG + chr8_2:22632319-22632338 Msa1240210:intron 35.0%
! GACAGAATTTTCAGAGTAGA+AGG - chr8_2:22632405-22632424 None:intergenic 35.0%
TAACATAGACGAGTTTCTTG+AGG + chr8_2:22632538-22632557 Msa1240210:CDS 35.0%
AACATAGACGAGTTTCTTGA+GGG + chr8_2:22632539-22632558 Msa1240210:CDS 35.0%
! TGTCTCAAGAAATGCTTTTC+AGG - chr8_2:22632602-22632621 None:intergenic 35.0%
GGTAAACATGGAAAAAGGTT+AGG + chr8_2:22632628-22632647 Msa1240210:three_prime_UTR 35.0%
TTTAGTGTCAACAAGTTCGA+AGG - chr8_2:22632755-22632774 None:intergenic 35.0%
TGCTTAATATACTAGGCAGA+AGG + chr8_2:22632777-22632796 Msa1240210:three_prime_UTR 35.0%
ATGTAGCAGATTCTTCTACT+TGG - chr8_2:22632878-22632897 None:intergenic 35.0%
TCAACTAGCACTTAAACGAG+TGG - chr8_2:22626005-22626024 None:intergenic 40.0%
!! CGATCAGATTTTGGGAACAA+AGG - chr8_2:22626180-22626199 None:intergenic 40.0%
! AGGAGCTACGATCAGATTTT+GGG - chr8_2:22626188-22626207 None:intergenic 40.0%
! AAGGAGCTACGATCAGATTT+TGG - chr8_2:22626189-22626208 None:intergenic 40.0%
GATGTCATGGTGAATGAAGA+AGG - chr8_2:22626208-22626227 None:intergenic 40.0%
TTCATTCACCATGACATCGT+TGG + chr8_2:22626210-22626229 Msa1240210:exon 40.0%
TCATTCACCATGACATCGTT+GGG + chr8_2:22626211-22626230 Msa1240210:exon 40.0%
GAGGAGGGAATGAAAAGAAA+CGG - chr8_2:22626286-22626305 None:intergenic 40.0%
TCCATTAAGGAAAAGGAAGG+AGG + chr8_2:22627131-22627150 Msa1240210:intron 40.0%
TGTGACTGGGATGCTTATAT+TGG + chr8_2:22627283-22627302 Msa1240210:intron 40.0%
!! TATATTGGTTTCCTACGGCT+TGG + chr8_2:22627298-22627317 Msa1240210:intron 40.0%
! AGATTTTATCACCAAGCCGT+AGG - chr8_2:22627312-22627331 None:intergenic 40.0%
! AATGACCTTCAGGATTTGGT+TGG + chr8_2:22627402-22627421 Msa1240210:intron 40.0%
! TTGGTTGGCCACATTGAAAA+AGG + chr8_2:22627417-22627436 Msa1240210:intron 40.0%
! GCAAGTTCCTTTTACCATCT+TGG + chr8_2:22627536-22627555 Msa1240210:intron 40.0%
AGCAGTACCAAGATGGTAAA+AGG - chr8_2:22627546-22627565 None:intergenic 40.0%
ATTCTCTAGCAGTACCAAGA+TGG - chr8_2:22627553-22627572 None:intergenic 40.0%
! GTGCCTACAGTTAGTTTCTA+TGG + chr8_2:22627672-22627691 Msa1240210:intron 40.0%
AGATAAAGACACGCTAAGAG+AGG + chr8_2:22627737-22627756 Msa1240210:CDS 40.0%
GATAAAGACACGCTAAGAGA+GGG + chr8_2:22627738-22627757 Msa1240210:CDS 40.0%
AAGCTACAAGAGATGACTAC+TGG - chr8_2:22627951-22627970 None:intergenic 40.0%
! AGTCATCTCTTGTAGCTTGT+TGG + chr8_2:22627953-22627972 Msa1240210:intron 40.0%
!! GTCATCTCTTGTAGCTTGTT+GGG + chr8_2:22627954-22627973 Msa1240210:intron 40.0%
!! TAGCTTGTTGGGTTATCCTT+TGG + chr8_2:22627965-22627984 Msa1240210:intron 40.0%
TAAAAGGATCTTCAGTAGGG+TGG - chr8_2:22628253-22628272 None:intergenic 40.0%
! ACCCTACTGAAGATCCTTTT+AGG + chr8_2:22628252-22628271 Msa1240210:intron 40.0%
CTCCTAAAAGGATCTTCAGT+AGG - chr8_2:22628257-22628276 None:intergenic 40.0%
GAAAAGATGGTAAGGAAGAG+CGG - chr8_2:22628320-22628339 None:intergenic 40.0%
TGCAAGATTTATACGGTCAG+AGG + chr8_2:22628394-22628413 Msa1240210:intron 40.0%
CAGGATTGGGACATTCTATT+TGG + chr8_2:22628709-22628728 Msa1240210:intron 40.0%
GGGGAAATTGACAAATCACA+AGG - chr8_2:22629196-22629215 None:intergenic 40.0%
!!! TTTCACCGACTAGTTTTGCT+TGG + chr8_2:22629362-22629381 Msa1240210:intron 40.0%
AACTATGGGATTCATACGGA+TGG - chr8_2:22629592-22629611 None:intergenic 40.0%
GACCATCATAGGAAATGACA+AGG - chr8_2:22629629-22629648 None:intergenic 40.0%
CAATGCAGTTAGAATAGGAC+AGG - chr8_2:22629820-22629839 None:intergenic 40.0%
GTTAACCCAATCAAAAGGGA+AGG + chr8_2:22630056-22630075 Msa1240210:intron 40.0%
!! CTTCTCCTTCCCTTTTGATT+GGG - chr8_2:22630064-22630083 None:intergenic 40.0%
! TCTTCTCCTTCCCTTTTGAT+TGG - chr8_2:22630065-22630084 None:intergenic 40.0%
TATAGTAAGGTTCTTCCTGG+TGG - chr8_2:22630110-22630129 None:intergenic 40.0%
AACAGCAACACCCACTAAAT+GGG - chr8_2:22630194-22630213 None:intergenic 40.0%
TCAGAAGAAAACAATGGCAC+GGG - chr8_2:22630629-22630648 None:intergenic 40.0%
GAATCCATATCCTCTAGTGA+AGG + chr8_2:22630647-22630666 Msa1240210:intron 40.0%
GATATTAGTCCCTTCACTAG+AGG - chr8_2:22630660-22630679 None:intergenic 40.0%
GCCAATATGCTTTGACATTC+AGG + chr8_2:22631378-22631397 Msa1240210:intron 40.0%
CAGGGAAACTTAACTACAAG+AGG + chr8_2:22631617-22631636 Msa1240210:CDS 40.0%
AAAAGCTGGACAGAAGAAAG+AGG + chr8_2:22631674-22631693 Msa1240210:CDS 40.0%
AGGAAAATAAGAAGGGGGTT+GGG - chr8_2:22631723-22631742 None:intergenic 40.0%
GAACGACTCCTACAATTGAA+AGG - chr8_2:22631775-22631794 None:intergenic 40.0%
! TTCGAAGAGTGATGATGATC+TGG + chr8_2:22631792-22631811 Msa1240210:CDS 40.0%
TCCTTCTCTCTTCACTTTCT+TGG - chr8_2:22631825-22631844 None:intergenic 40.0%
AGTGAAGAGAGAAGGAGAAA+AGG + chr8_2:22631829-22631848 Msa1240210:CDS 40.0%
! GTTTTTGTTGCAGGATAGAC+CGG + chr8_2:22631918-22631937 Msa1240210:intron 40.0%
! TAATGGTTTGCCAAATCGCT+AGG + chr8_2:22632195-22632214 Msa1240210:intron 40.0%
ACTTTCCTAACCTAGCGATT+TGG - chr8_2:22632208-22632227 None:intergenic 40.0%
GCTTAAATCTGACCCATTGT+TGG - chr8_2:22632294-22632313 None:intergenic 40.0%
CAATGGGTCAGATTTAAGCA+AGG + chr8_2:22632295-22632314 Msa1240210:intron 40.0%
!! ATTTTCAGGAAAGAGGGCTT+TGG + chr8_2:22632466-22632485 Msa1240210:intron 40.0%
ACATAGACGAGTTTCTTGAG+GGG + chr8_2:22632540-22632559 Msa1240210:CDS 40.0%
GAGCTGGTAAACATGGAAAA+AGG + chr8_2:22632623-22632642 Msa1240210:three_prime_UTR 40.0%
GAAGAATCTGCTACATGTTC+TGG + chr8_2:22632882-22632901 Msa1240210:three_prime_UTR 40.0%
CTCTTCTCTGTCGAATATCG+CGG - chr8_2:22626248-22626267 None:intergenic 45.0%
CAGTATCAGGCTCATATTCG+AGG + chr8_2:22626359-22626378 Msa1240210:CDS 45.0%
CCTATTGTCCATTCCCAAAC+AGG - chr8_2:22627039-22627058 None:intergenic 45.0%
CCTGTTTGGGAATGGACAAT+AGG + chr8_2:22627036-22627055 Msa1240210:intron 45.0%
! GCCTCCTTCCTTTTCCTTAA+TGG - chr8_2:22627135-22627154 None:intergenic 45.0%
CAGGGGGTTGTTTGAATTTC+CGG - chr8_2:22627167-22627186 None:intergenic 45.0%
ACATGCACGGTTTATAGCAG+GGG - chr8_2:22627184-22627203 None:intergenic 45.0%
GACATGCACGGTTTATAGCA+GGG - chr8_2:22627185-22627204 None:intergenic 45.0%
TGACATGCACGGTTTATAGC+AGG - chr8_2:22627186-22627205 None:intergenic 45.0%
GTGATCTGTCAGAAGTCTGA+TGG + chr8_2:22627351-22627370 Msa1240210:intron 45.0%
CACAGTAAGCTGAAATGCCA+TGG - chr8_2:22627593-22627612 None:intergenic 45.0%
ACACGCTAAGAGAGGGATAT+AGG + chr8_2:22627745-22627764 Msa1240210:CDS 45.0%
ACGGTCAGAGGAAGATGATA+TGG + chr8_2:22628406-22628425 Msa1240210:CDS 45.0%
GACATGTCACAGTACAAGAG+TGG + chr8_2:22629095-22629114 Msa1240210:intron 45.0%
GTCACAGTACAAGAGTGGTA+AGG + chr8_2:22629100-22629119 Msa1240210:intron 45.0%
TCTCAGATGGAGAACAGAGA+AGG + chr8_2:22629308-22629327 Msa1240210:CDS 45.0%
ACAGAGAAGGAAGTCATGTC+TGG + chr8_2:22629321-22629340 Msa1240210:CDS 45.0%
AAGGAAGTCATGTCTGGCAA+AGG + chr8_2:22629327-22629346 Msa1240210:CDS 45.0%
! GTCATGTCTGGCAAAGGTAT+TGG + chr8_2:22629333-22629352 Msa1240210:intron 45.0%
!! AGATGGATTAGCAAGCTACG+AGG + chr8_2:22629964-22629983 Msa1240210:CDS 45.0%
GATTAGCAAGCTACGAGGTA+AGG + chr8_2:22629969-22629988 Msa1240210:intron 45.0%
ACTAAATGGGGACAGCTACA+TGG - chr8_2:22630181-22630200 None:intergenic 45.0%
ATGTAGCTGTCCCCATTTAG+TGG + chr8_2:22630180-22630199 Msa1240210:intron 45.0%
TGTAGCTGTCCCCATTTAGT+GGG + chr8_2:22630181-22630200 Msa1240210:intron 45.0%
ACAGCAACACCCACTAAATG+GGG - chr8_2:22630193-22630212 None:intergenic 45.0%
CAACAGCAACACCCACTAAA+TGG - chr8_2:22630195-22630214 None:intergenic 45.0%
AGTCCCTTCACTAGAGGATA+TGG - chr8_2:22630654-22630673 None:intergenic 45.0%
CTACAAGAGGCAGAAAGAGA+AGG + chr8_2:22631630-22631649 Msa1240210:CDS 45.0%
GAGGTGAGAAACGAGAACAT+TGG + chr8_2:22631693-22631712 Msa1240210:intron 45.0%
GAAAATAAGAAGGGGGTTGG+GGG - chr8_2:22631721-22631740 None:intergenic 45.0%
GGAAAATAAGAAGGGGGTTG+GGG - chr8_2:22631722-22631741 None:intergenic 45.0%
GAGGAAAATAAGAAGGGGGT+TGG - chr8_2:22631724-22631743 None:intergenic 45.0%
! AGTGATGATGATCTGGACGA+GGG + chr8_2:22631799-22631818 Msa1240210:CDS 45.0%
GCCAAGAAAGTGAAGAGAGA+AGG + chr8_2:22631821-22631840 Msa1240210:CDS 45.0%
GTTTGCCAAATCGCTAGGTT+AGG + chr8_2:22632200-22632219 Msa1240210:intron 45.0%
GCATTTCTTGAGACAAGAGC+TGG + chr8_2:22632607-22632626 Msa1240210:three_prime_UTR 45.0%
GAGACAAGAGCTGGTAAACA+TGG + chr8_2:22632616-22632635 Msa1240210:three_prime_UTR 45.0%
GAAAAAGGTTAGGCAGTGCT+GGG + chr8_2:22632638-22632657 Msa1240210:three_prime_UTR 45.0%
!! ATATAATAATTTATCTAAAA+TGG + chr8_2:22628960-22628979 Msa1240210:intron 5.0%
!!! TTTTTTTTTTAAATAATTGA+AGG + chr8_2:22631536-22631555 Msa1240210:intron 5.0%
CGAAGAGAGGATTGCGAAAC+TGG + chr8_2:22626109-22626128 Msa1240210:five_prime_UTR 50.0%
CAGAGATCCCAACGATGTCA+TGG - chr8_2:22626221-22626240 None:intergenic 50.0%
CATGCACGGTTTATAGCAGG+GGG - chr8_2:22627183-22627202 None:intergenic 50.0%
TGTGGCCAACCAAATCCTGA+AGG - chr8_2:22627410-22627429 None:intergenic 50.0%
TGGATCCATCATGGGAGCAA+AGG + chr8_2:22628426-22628445 Msa1240210:CDS 50.0%
TCAGCTCTTCTTGAGGGCTA+AGG + chr8_2:22630435-22630454 Msa1240210:intron 50.0%
ATGGCACGGGCAACAAAACT+TGG - chr8_2:22630616-22630635 None:intergenic 50.0%
!! GGCAGGAAGCATTATCCAGA+AGG - chr8_2:22630804-22630823 None:intergenic 50.0%
! GAGTGATGATGATCTGGACG+AGG + chr8_2:22631798-22631817 Msa1240210:CDS 50.0%
GGAAAAAGGTTAGGCAGTGC+TGG + chr8_2:22632637-22632656 Msa1240210:three_prime_UTR 50.0%
TGGGAGCAAGTGGATAATGC+AGG + chr8_2:22632657-22632676 Msa1240210:three_prime_UTR 50.0%
GGAAGGAGGCTACAGTCATC+CGG + chr8_2:22627145-22627164 Msa1240210:intron 55.0%
TCCATCATGGGAGCAAAGGC+TGG + chr8_2:22628430-22628449 Msa1240210:CDS 55.0%
ACCAGCCTTTGCTCCCATGA+TGG - chr8_2:22628434-22628453 None:intergenic 55.0%
! TAGGCAGTGCTGGGAGCAAG+TGG + chr8_2:22632647-22632666 Msa1240210:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 22625998 22633002 22625998 ID=Msa1240210;Name=Msa1240210
chr8_2 mRNA 22625998 22633002 22625998 ID=Msa1240210-mRNA-1;Parent=Msa1240210;Name=Msa1240210-mRNA-1;_AED=0.11;_eAED=0.11;_QI=222|0.88|0.9|1|1|1|10|428|227
chr8_2 exon 22625998 22626275 22625998 ID=Msa1240210-mRNA-1:exon:8014;Parent=Msa1240210-mRNA-1
chr8_2 exon 22626358 22626425 22626358 ID=Msa1240210-mRNA-1:exon:8015;Parent=Msa1240210-mRNA-1
chr8_2 exon 22627682 22627766 22627682 ID=Msa1240210-mRNA-1:exon:8016;Parent=Msa1240210-mRNA-1
chr8_2 exon 22628400 22628451 22628400 ID=Msa1240210-mRNA-1:exon:8017;Parent=Msa1240210-mRNA-1
chr8_2 exon 22629303 22629348 22629303 ID=Msa1240210-mRNA-1:exon:8018;Parent=Msa1240210-mRNA-1
chr8_2 exon 22629927 22629985 22629927 ID=Msa1240210-mRNA-1:exon:8019;Parent=Msa1240210-mRNA-1
chr8_2 exon 22630524 22630591 22630524 ID=Msa1240210-mRNA-1:exon:8020;Parent=Msa1240210-mRNA-1
chr8_2 exon 22631612 22631695 22631612 ID=Msa1240210-mRNA-1:exon:8021;Parent=Msa1240210-mRNA-1
chr8_2 exon 22631786 22631850 22631786 ID=Msa1240210-mRNA-1:exon:8022;Parent=Msa1240210-mRNA-1
chr8_2 exon 22632474 22633002 22632474 ID=Msa1240210-mRNA-1:exon:8023;Parent=Msa1240210-mRNA-1
chr8_2 five_prime_UTR 22625998 22626219 22625998 ID=Msa1240210-mRNA-1:five_prime_utr;Parent=Msa1240210-mRNA-1
chr8_2 CDS 22626220 22626275 22626220 ID=Msa1240210-mRNA-1:cds;Parent=Msa1240210-mRNA-1
chr8_2 CDS 22626358 22626425 22626358 ID=Msa1240210-mRNA-1:cds;Parent=Msa1240210-mRNA-1
chr8_2 CDS 22627682 22627766 22627682 ID=Msa1240210-mRNA-1:cds;Parent=Msa1240210-mRNA-1
chr8_2 CDS 22628400 22628451 22628400 ID=Msa1240210-mRNA-1:cds;Parent=Msa1240210-mRNA-1
chr8_2 CDS 22629303 22629348 22629303 ID=Msa1240210-mRNA-1:cds;Parent=Msa1240210-mRNA-1
chr8_2 CDS 22629927 22629985 22629927 ID=Msa1240210-mRNA-1:cds;Parent=Msa1240210-mRNA-1
chr8_2 CDS 22630524 22630591 22630524 ID=Msa1240210-mRNA-1:cds;Parent=Msa1240210-mRNA-1
chr8_2 CDS 22631612 22631695 22631612 ID=Msa1240210-mRNA-1:cds;Parent=Msa1240210-mRNA-1
chr8_2 CDS 22631786 22631850 22631786 ID=Msa1240210-mRNA-1:cds;Parent=Msa1240210-mRNA-1
chr8_2 CDS 22632474 22632574 22632474 ID=Msa1240210-mRNA-1:cds;Parent=Msa1240210-mRNA-1
chr8_2 three_prime_UTR 22632575 22633002 22632575 ID=Msa1240210-mRNA-1:three_prime_utr;Parent=Msa1240210-mRNA-1
Gene Sequence

>Msa1240210

ATGACATCGTTGGGATCTCTGAAATCCGCGATATTCGACAGAGAAGAGAGAAAACAACAGTATCAGGCTCATATTCGAGGTCTTAATGCATACGATCGCCACAAAAAGTTTATCAACGATTACGTTAGTTTCTATGGGAAAGAAGAAAAACCTTCAACCTTAAAGTTGCCTATTAAAACAGATAAAGACACGCTAAGAGAGGGATATAGATTTATACGGTCAGAGGAAGATGATATGGATCCATCATGGGAGCAAAGGCTGATTGGTCTCAGATGGAGAACAGAGAAGGAAGTCATGTCTGGCAAAGGTCAGTTTATATGCGGCAACAAGCATTGCAATGAGAAAGATGGATTAGCAAGCTACGAGGTGAACTTTTGTTATTTTGAAGCAGGAGAGAACAAACAAGCTCTAGTTAAATTGGTAGCATGTGAGAGATGTGCAGGGAAACTTAACTACAAGAGGCAGAAAGAGAAGGAGCAATTAGAAAGAAGACAACAAAAGCTGGACAGAAGAAAGAGGAGTCGTTCGAAGAGTGATGATGATCTGGACGAGGGCCAAGAAAGTGAAGAGAGAAGGAGAAAAGGAAAGAGGGCTTTGGTTTCAGCCAGTGATCATAAAATTGATGATGATAATGATTCTGATGATGATAACATAGACGAGTTTCTTGAGGGGATGTTTCCCTGA

Protein sequence

>Msa1240210

MTSLGSLKSAIFDREERKQQYQAHIRGLNAYDRHKKFINDYVSFYGKEEKPSTLKLPIKTDKDTLREGYRFIRSEEDDMDPSWEQRLIGLRWRTEKEVMSGKGQFICGNKHCNEKDGLASYEVNFCYFEAGENKQALVKLVACERCAGKLNYKRQKEKEQLERRQQKLDRRKRSRSKSDDDLDEGQESEERRRKGKRALVSASDHKIDDDNDSDDDNIDEFLEGMFP*