Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452300 | sp|Q8LDR0|DOF54_ARATH | 43.168 | 322 | 113 | 13 | 29 | 328 | 34 | 307 | 1.03e-54 | 184 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452300 | A0A072UQU9 | 95.427 | 328 | 7 | 2 | 1 | 328 | 1 | 320 | 0.0 | 634 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1452300 | TF | C2C2-Dof |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011910 | Msa1452300 | 0.816949 | 4.248457e-52 | -8.615850e-47 |
| Msa0022230 | Msa1452300 | 0.803127 | 4.043646e-49 | -8.615850e-47 |
| Msa0027030 | Msa1452300 | 0.808218 | 3.451061e-50 | -8.615850e-47 |
| Msa0028450 | Msa1452300 | 0.809797 | 1.584386e-50 | -8.615850e-47 |
| Msa0036990 | Msa1452300 | 0.802554 | 5.310131e-49 | -8.615850e-47 |
| Msa0039780 | Msa1452300 | 0.837696 | 4.463936e-57 | -8.615850e-47 |
| Msa0042130 | Msa1452300 | 0.822834 | 1.915828e-53 | -8.615850e-47 |
| Msa0057270 | Msa1452300 | 0.819369 | 1.203941e-52 | -8.615850e-47 |
| Msa0060720 | Msa1452300 | 0.826133 | 3.206977e-54 | -8.615850e-47 |
| Msa0074860 | Msa1452300 | 0.808272 | 3.359660e-50 | -8.615850e-47 |
| Msa0079100 | Msa1452300 | 0.831932 | 1.261135e-55 | -8.615850e-47 |
| Msa0087370 | Msa1452300 | 0.837060 | 6.493010e-57 | -8.615850e-47 |
| Msa0089410 | Msa1452300 | 0.835607 | 1.520360e-56 | -8.615850e-47 |
| Msa0089470 | Msa1452300 | 0.808172 | 3.529926e-50 | -8.615850e-47 |
| Msa0093360 | Msa1452300 | 0.807704 | 4.437806e-50 | -8.615850e-47 |
| Msa0105500 | Msa1452300 | 0.831573 | 1.546313e-55 | -8.615850e-47 |
| Msa0109260 | Msa1452300 | 0.809661 | 1.694269e-50 | -8.615850e-47 |
| Msa0118700 | Msa1452300 | 0.811825 | 5.767149e-51 | -8.615850e-47 |
| Msa1346220 | Msa1452300 | 0.829024 | 6.485597e-55 | -8.615850e-47 |
| Msa1346340 | Msa1452300 | 0.824199 | 9.187446e-54 | -8.615850e-47 |
| Msa1348180 | Msa1452300 | 0.803889 | 2.810594e-49 | -8.615850e-47 |
| Msa1350580 | Msa1452300 | 0.802099 | 6.588585e-49 | -8.615850e-47 |
| Msa1356100 | Msa1452300 | 0.807901 | 4.030920e-50 | -8.615850e-47 |
| Msa1364850 | Msa1452300 | 0.807098 | 5.967853e-50 | -8.615850e-47 |
| Msa1371540 | Msa1452300 | 0.808364 | 3.211386e-50 | -8.615850e-47 |
| Msa1372470 | Msa1452300 | 0.809776 | 1.600775e-50 | -8.615850e-47 |
| Msa1373310 | Msa1452300 | 0.804702 | 1.902950e-49 | -8.615850e-47 |
| Msa1376010 | Msa1452300 | 0.801626 | 8.238810e-49 | -8.615850e-47 |
| Msa1377980 | Msa1452300 | 0.813013 | 3.173171e-51 | -8.615850e-47 |
| Msa1381300 | Msa1452300 | 0.817452 | 3.273992e-52 | -8.615850e-47 |
| Msa1381830 | Msa1452300 | 0.828879 | 7.033629e-55 | -8.615850e-47 |
| Msa1382100 | Msa1452300 | 0.808275 | 3.355509e-50 | -8.615850e-47 |
| Msa1392570 | Msa1452300 | 0.810075 | 1.380213e-50 | -8.615850e-47 |
| Msa1397550 | Msa1452300 | 0.852664 | 3.978831e-61 | -8.615850e-47 |
| Msa1408280 | Msa1452300 | 0.811837 | 5.734473e-51 | -8.615850e-47 |
| Msa1413360 | Msa1452300 | 0.811569 | 6.557311e-51 | -8.615850e-47 |
| Msa1418780 | Msa1452300 | 0.809604 | 1.743485e-50 | -8.615850e-47 |
| Msa1418840 | Msa1452300 | 0.810206 | 1.293339e-50 | -8.615850e-47 |
| Msa1424250 | Msa1452300 | 0.807505 | 4.891239e-50 | -8.615850e-47 |
| Msa1424490 | Msa1452300 | 0.801738 | 7.816134e-49 | -8.615850e-47 |
| Msa1427260 | Msa1452300 | 0.917781 | 3.494880e-86 | -8.615850e-47 |
| Msa1434850 | Msa1452300 | 0.815836 | 7.537713e-52 | -8.615850e-47 |
| Msa1436660 | Msa1452300 | 0.801956 | 7.049801e-49 | -8.615850e-47 |
| Msa1440160 | Msa1452300 | 0.801339 | 9.434607e-49 | -8.615850e-47 |
| Msa1452300 | Msa1461840 | 0.800725 | 1.259439e-48 | -8.615850e-47 |
| Msa0606250 | Msa1452300 | 0.804249 | 2.364912e-49 | -8.615850e-47 |
| Msa0619450 | Msa1452300 | 0.802571 | 5.266104e-49 | -8.615850e-47 |
| Msa0625850 | Msa1452300 | 0.826978 | 2.015662e-54 | -8.615850e-47 |
| Msa0625900 | Msa1452300 | 0.812417 | 4.284211e-51 | -8.615850e-47 |
| Msa0628900 | Msa1452300 | 0.823714 | 1.193787e-53 | -8.615850e-47 |
| Msa0634260 | Msa1452300 | 0.820935 | 5.273161e-53 | -8.615850e-47 |
| Msa0638030 | Msa1452300 | 0.804773 | 1.838614e-49 | -8.615850e-47 |
| Msa0644610 | Msa1452300 | 0.836229 | 1.057620e-56 | -8.615850e-47 |
| Msa0659580 | Msa1452300 | 0.803272 | 3.773967e-49 | -8.615850e-47 |
| Msa0663630 | Msa1452300 | 0.829463 | 5.076946e-55 | -8.615850e-47 |
| Msa0663650 | Msa1452300 | 0.807457 | 5.008488e-50 | -8.615850e-47 |
| Msa0663690 | Msa1452300 | 0.809172 | 2.157606e-50 | -8.615850e-47 |
| Msa0665010 | Msa1452300 | 0.808830 | 2.553715e-50 | -8.615850e-47 |
| Msa0677140 | Msa1452300 | 0.805268 | 1.449114e-49 | -8.615850e-47 |
| Msa0691740 | Msa1452300 | 0.806282 | 8.871449e-50 | -8.615850e-47 |
| Msa0712580 | Msa1452300 | 0.803504 | 3.377969e-49 | -8.615850e-47 |
| Msa0712670 | Msa1452300 | 0.812588 | 3.931525e-51 | -8.615850e-47 |
| Msa0729740 | Msa1452300 | 0.819372 | 1.202403e-52 | -8.615850e-47 |
| Msa0733460 | Msa1452300 | 0.804925 | 1.709660e-49 | -8.615850e-47 |
| Msa0745270 | Msa1452300 | 0.808247 | 3.401450e-50 | -8.615850e-47 |
| Msa0770540 | Msa1452300 | 0.809871 | 1.527381e-50 | -8.615850e-47 |
| Msa0808500 | Msa1452300 | 0.810261 | 1.258859e-50 | -8.615850e-47 |
| Msa0826820 | Msa1452300 | 0.803265 | 3.786451e-49 | -8.615850e-47 |
| Msa0829250 | Msa1452300 | 0.804707 | 1.898004e-49 | -8.615850e-47 |
| Msa0134120 | Msa1452300 | 0.831181 | 1.931198e-55 | -8.615850e-47 |
| Msa0136520 | Msa1452300 | 0.854733 | 1.011131e-61 | -8.615850e-47 |
| Msa0138340 | Msa1452300 | 0.809717 | 1.647869e-50 | -8.615850e-47 |
| Msa0147960 | Msa1452300 | 0.812218 | 4.736479e-51 | -8.615850e-47 |
| Msa0151780 | Msa1452300 | 0.839845 | 1.241736e-57 | -8.615850e-47 |
| Msa0155500 | Msa1452300 | 0.823687 | 1.211344e-53 | -8.615850e-47 |
| Msa0163540 | Msa1452300 | 0.802211 | 6.247235e-49 | -8.615850e-47 |
| Msa0164310 | Msa1452300 | 0.812106 | 5.010148e-51 | -8.615850e-47 |
| Msa0167150 | Msa1452300 | 0.813170 | 2.931549e-51 | -8.615850e-47 |
| Msa0168470 | Msa1452300 | 0.801659 | 8.110195e-49 | -8.615850e-47 |
| Msa0170690 | Msa1452300 | 0.830230 | 3.301630e-55 | -8.615850e-47 |
| Msa0175240 | Msa1452300 | 0.827439 | 1.563804e-54 | -8.615850e-47 |
| Msa0178440 | Msa1452300 | 0.804011 | 2.650973e-49 | -8.615850e-47 |
| Msa0183960 | Msa1452300 | 0.807469 | 4.979301e-50 | -8.615850e-47 |
| Msa0187560 | Msa1452300 | 0.803183 | 3.936384e-49 | -8.615850e-47 |
| Msa0187820 | Msa1452300 | 0.838744 | 2.397800e-57 | -8.615850e-47 |
| Msa0194420 | Msa1452300 | 0.810822 | 9.522017e-51 | -8.615850e-47 |
| Msa0194750 | Msa1452300 | 0.806240 | 9.054879e-50 | -8.615850e-47 |
| Msa0208710 | Msa1452300 | 0.816569 | 5.168888e-52 | -8.615850e-47 |
| Msa0232170 | Msa1452300 | 0.821134 | 4.745272e-53 | -8.615850e-47 |
| Msa0236690 | Msa1452300 | 0.802137 | 6.471112e-49 | -8.615850e-47 |
| Msa1225140 | Msa1452300 | 0.801219 | 9.981717e-49 | -8.615850e-47 |
| Msa1228600 | Msa1452300 | 0.806474 | 8.081766e-50 | -8.615850e-47 |
| Msa1240240 | Msa1452300 | 0.804094 | 2.547519e-49 | -8.615850e-47 |
| Msa1250490 | Msa1452300 | 0.804875 | 1.750567e-49 | -8.615850e-47 |
| Msa1260640 | Msa1452300 | 0.822900 | 1.849803e-53 | -8.615850e-47 |
| Msa1277890 | Msa1452300 | 0.808143 | 3.579331e-50 | -8.615850e-47 |
| Msa1279200 | Msa1452300 | 0.803704 | 3.070852e-49 | -8.615850e-47 |
| Msa1297490 | Msa1452300 | 0.807964 | 3.907276e-50 | -8.615850e-47 |
| Msa1297550 | Msa1452300 | 0.822509 | 2.280244e-53 | -8.615850e-47 |
| Msa1307110 | Msa1452300 | 0.826176 | 3.131560e-54 | -8.615850e-47 |
| Msa1315880 | Msa1452300 | 0.808364 | 3.212379e-50 | -8.615850e-47 |
| Msa1320660 | Msa1452300 | 0.809337 | 1.988840e-50 | -8.615850e-47 |
| Msa1328680 | Msa1452300 | 0.811677 | 6.213156e-51 | -8.615850e-47 |
| Msa1330910 | Msa1452300 | 0.810185 | 1.306762e-50 | -8.615850e-47 |
| Msa0368620 | Msa1452300 | -0.801731 | 7.842034e-49 | -8.615850e-47 |
| Msa0382060 | Msa1452300 | 0.811891 | 5.580862e-51 | -8.615850e-47 |
| Msa0385850 | Msa1452300 | 0.809424 | 1.905262e-50 | -8.615850e-47 |
| Msa0389710 | Msa1452300 | -0.805849 | 1.094204e-49 | -8.615850e-47 |
| Msa0402490 | Msa1452300 | 0.812656 | 3.798455e-51 | -8.615850e-47 |
| Msa0413590 | Msa1452300 | 0.802432 | 5.627377e-49 | -8.615850e-47 |
| Msa0415200 | Msa1452300 | 0.807060 | 6.078416e-50 | -8.615850e-47 |
| Msa0415760 | Msa1452300 | 0.801212 | 1.001432e-48 | -8.615850e-47 |
| Msa0431560 | Msa1452300 | 0.815173 | 1.058837e-51 | -8.615850e-47 |
| Msa0446110 | Msa1452300 | 0.804214 | 2.404648e-49 | -8.615850e-47 |
| Msa0447810 | Msa1452300 | 0.807685 | 4.480880e-50 | -8.615850e-47 |
| Msa0450890 | Msa1452300 | 0.801104 | 1.054058e-48 | -8.615850e-47 |
| Msa0458690 | Msa1452300 | 0.821557 | 3.789838e-53 | -8.615850e-47 |
| Msa0460510 | Msa1452300 | 0.800510 | 1.393047e-48 | -8.615850e-47 |
| Msa0469770 | Msa1452300 | 0.813415 | 2.589488e-51 | -8.615850e-47 |
| Msa0469840 | Msa1452300 | 0.801744 | 7.793150e-49 | -8.615850e-47 |
| Msa0476570 | Msa1452300 | 0.805516 | 1.285580e-49 | -8.615850e-47 |
| Msa0480260 | Msa1452300 | -0.802899 | 4.507115e-49 | -8.615850e-47 |
| Msa0998940 | Msa1452300 | 0.825483 | 4.573921e-54 | -8.615850e-47 |
| Msa1015020 | Msa1452300 | 0.831908 | 1.278107e-55 | -8.615850e-47 |
| Msa1022660 | Msa1452300 | 0.802185 | 6.326019e-49 | -8.615850e-47 |
| Msa1032790 | Msa1452300 | 0.808684 | 2.744118e-50 | -8.615850e-47 |
| Msa1038610 | Msa1452300 | 0.800902 | 1.158874e-48 | -8.615850e-47 |
| Msa1039150 | Msa1452300 | 0.821987 | 3.013815e-53 | -8.615850e-47 |
| Msa1042380 | Msa1452300 | 0.800333 | 1.513763e-48 | -8.615850e-47 |
| Msa1071380 | Msa1452300 | 0.802133 | 6.483861e-49 | -8.615850e-47 |
| Msa1083660 | Msa1452300 | 0.815646 | 8.310538e-52 | -8.615850e-47 |
| Msa1088000 | Msa1452300 | 0.808046 | 3.754790e-50 | -8.615850e-47 |
| Msa1099330 | Msa1452300 | 0.803738 | 3.020345e-49 | -8.615850e-47 |
| Msa0240630 | Msa1452300 | 0.800410 | 1.460203e-48 | -8.615850e-47 |
| Msa0269660 | Msa1452300 | 0.808971 | 2.383024e-50 | -8.615850e-47 |
| Msa0310260 | Msa1452300 | 0.811637 | 6.337634e-51 | -8.615850e-47 |
| Msa0343460 | Msa1452300 | 0.800715 | 1.265652e-48 | -8.615850e-47 |
| Msa0355630 | Msa1452300 | 0.800653 | 1.302775e-48 | -8.615850e-47 |
| Msa0363090 | Msa1452300 | 0.813736 | 2.201143e-51 | -8.615850e-47 |
| Msa1112230 | Msa1452300 | 0.805656 | 1.201307e-49 | -8.615850e-47 |
| Msa1121720 | Msa1452300 | 0.808521 | 2.973280e-50 | -8.615850e-47 |
| Msa1122710 | Msa1452300 | 0.804713 | 1.892827e-49 | -8.615850e-47 |
| Msa1129320 | Msa1452300 | 0.812337 | 4.459369e-51 | -8.615850e-47 |
| Msa1161550 | Msa1452300 | 0.805800 | 1.120677e-49 | -8.615850e-47 |
| Msa1199540 | Msa1452300 | 0.802641 | 5.095683e-49 | -8.615850e-47 |
| Msa1199700 | Msa1452300 | 0.801292 | 9.647023e-49 | -8.615850e-47 |
| Msa1206500 | Msa1452300 | 0.808481 | 3.032760e-50 | -8.615850e-47 |
| Msa1206510 | Msa1452300 | 0.809262 | 2.063812e-50 | -8.615850e-47 |
| Msa0483090 | Msa1452300 | 0.808069 | 3.712150e-50 | -8.615850e-47 |
| Msa0486240 | Msa1452300 | 0.801641 | 8.180452e-49 | -8.615850e-47 |
| Msa0504640 | Msa1452300 | 0.807636 | 4.587478e-50 | -8.615850e-47 |
| Msa0515400 | Msa1452300 | 0.808705 | 2.716525e-50 | -8.615850e-47 |
| Msa0527210 | Msa1452300 | 0.808604 | 2.855103e-50 | -8.615850e-47 |
| Msa0538100 | Msa1452300 | 0.811920 | 5.500375e-51 | -8.615850e-47 |
| Msa0550760 | Msa1452300 | 0.814099 | 1.830969e-51 | -8.615850e-47 |
| Msa0550820 | Msa1452300 | 0.801054 | 1.078825e-48 | -8.615850e-47 |
| Msa0550870 | Msa1452300 | 0.821723 | 3.469463e-53 | -8.615850e-47 |
| Msa0550980 | Msa1452300 | 0.802398 | 5.718893e-49 | -8.615850e-47 |
| Msa0555210 | Msa1452300 | 0.806062 | 9.870078e-50 | -8.615850e-47 |
| Msa0557440 | Msa1452300 | 0.801982 | 6.963539e-49 | -8.615850e-47 |
| Msa0558220 | Msa1452300 | 0.805315 | 1.416552e-49 | -8.615850e-47 |
| Msa0565320 | Msa1452300 | 0.805944 | 1.045449e-49 | -8.615850e-47 |
| Msa0572730 | Msa1452300 | 0.802942 | 4.414916e-49 | -8.615850e-47 |
| Msa0585770 | Msa1452300 | 0.810449 | 1.146227e-50 | -8.615850e-47 |
| Msa0865500 | Msa1452300 | 0.802207 | 6.258471e-49 | -8.615850e-47 |
| Msa0873070 | Msa1452300 | 0.805364 | 1.383395e-49 | -8.615850e-47 |
| Msa0880310 | Msa1452300 | 0.810673 | 1.025260e-50 | -8.615850e-47 |
| Msa0899080 | Msa1452300 | 0.817413 | 3.340744e-52 | -8.615850e-47 |
| Msa0917630 | Msa1452300 | 0.800799 | 1.216662e-48 | -8.615850e-47 |
| Msa0934150 | Msa1452300 | 0.817325 | 3.496036e-52 | -8.615850e-47 |
| Msa0934290 | Msa1452300 | 0.802007 | 6.881021e-49 | -8.615850e-47 |
| Msa0941320 | Msa1452300 | 0.805444 | 1.330773e-49 | -8.615850e-47 |
| Msa0967250 | Msa1452300 | 0.810883 | 9.236100e-51 | -8.615850e-47 |
| Msa0967260 | Msa1452300 | 0.816783 | 4.629417e-52 | -8.615850e-47 |
| Msa0975440 | Msa1452300 | 0.819365 | 1.206648e-52 | -8.615850e-47 |
| Msa0975460 | Msa1452300 | 0.829692 | 4.465384e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452300 | MtrunA17_Chr4g0061761 | 95.427 | 328 | 7 | 2 | 1 | 328 | 1 | 320 | 0.0 | 634 |
| Msa1452300 | MtrunA17_Chr2g0308011 | 63.000 | 100 | 37 | 0 | 46 | 145 | 37 | 136 | 4.05e-34 | 124 |
| Msa1452300 | MtrunA17_Chr2g0328021 | 63.043 | 92 | 25 | 1 | 46 | 137 | 62 | 144 | 5.44e-34 | 126 |
| Msa1452300 | MtrunA17_Chr4g0047001 | 59.048 | 105 | 41 | 2 | 26 | 129 | 34 | 137 | 1.81e-33 | 127 |
| Msa1452300 | MtrunA17_Chr8g0374251 | 82.759 | 58 | 10 | 0 | 42 | 99 | 64 | 121 | 1.06e-31 | 121 |
| Msa1452300 | MtrunA17_Chr8g0341671 | 80.000 | 65 | 12 | 1 | 43 | 106 | 17 | 81 | 1.66e-31 | 117 |
| Msa1452300 | MtrunA17_Chr4g0031411 | 67.606 | 71 | 23 | 0 | 43 | 113 | 72 | 142 | 2.85e-31 | 120 |
| Msa1452300 | MtrunA17_Chr4g0010151 | 40.361 | 166 | 78 | 3 | 25 | 176 | 54 | 212 | 1.30e-30 | 119 |
| Msa1452300 | MtrunA17_Chr7g0237921 | 47.581 | 124 | 47 | 2 | 33 | 156 | 63 | 168 | 1.99e-30 | 118 |
| Msa1452300 | MtrunA17_Chr8g0374111 | 60.759 | 79 | 31 | 0 | 43 | 121 | 26 | 104 | 5.52e-30 | 114 |
| Msa1452300 | MtrunA17_Chr8g0367161 | 70.833 | 72 | 18 | 1 | 45 | 113 | 31 | 102 | 6.33e-30 | 116 |
| Msa1452300 | MtrunA17_Chr7g0223311 | 82.456 | 57 | 10 | 0 | 47 | 103 | 78 | 134 | 1.23e-29 | 116 |
| Msa1452300 | MtrunA17_Chr5g0411951 | 83.333 | 54 | 9 | 0 | 43 | 96 | 40 | 93 | 1.52e-29 | 115 |
| Msa1452300 | MtrunA17_Chr3g0127201 | 64.865 | 74 | 20 | 1 | 29 | 102 | 16 | 83 | 1.93e-29 | 114 |
| Msa1452300 | MtrunA17_Chr4g0030051 | 70.833 | 72 | 15 | 1 | 26 | 97 | 27 | 92 | 2.64e-29 | 114 |
| Msa1452300 | MtrunA17_Chr3g0117601 | 56.000 | 100 | 38 | 1 | 29 | 128 | 50 | 143 | 4.63e-29 | 114 |
| Msa1452300 | MtrunA17_Chr2g0326001 | 66.667 | 81 | 24 | 1 | 43 | 120 | 37 | 117 | 6.19e-29 | 112 |
| Msa1452300 | MtrunA17_Chr2g0282441 | 86.275 | 51 | 7 | 0 | 47 | 97 | 26 | 76 | 2.21e-28 | 112 |
| Msa1452300 | MtrunA17_Chr8g0346551 | 53.191 | 94 | 36 | 1 | 27 | 120 | 13 | 98 | 3.48e-28 | 110 |
| Msa1452300 | MtrunA17_Chr3g0126201 | 84.906 | 53 | 8 | 0 | 48 | 100 | 53 | 105 | 6.66e-28 | 110 |
| Msa1452300 | MtrunA17_Chr1g0177251 | 77.966 | 59 | 13 | 0 | 42 | 100 | 8 | 66 | 4.42e-27 | 107 |
| Msa1452300 | MtrunA17_Chr1g0188851 | 72.414 | 58 | 16 | 0 | 43 | 100 | 40 | 97 | 6.17e-27 | 107 |
| Msa1452300 | MtrunA17_Chr2g0282051 | 70.769 | 65 | 18 | 1 | 36 | 100 | 36 | 99 | 2.36e-26 | 105 |
| Msa1452300 | MtrunA17_Chr8g0355261 | 68.966 | 58 | 18 | 0 | 44 | 101 | 116 | 173 | 3.11e-26 | 108 |
| Msa1452300 | MtrunA17_Chr7g0217581 | 71.186 | 59 | 17 | 0 | 44 | 102 | 230 | 288 | 3.60e-26 | 108 |
| Msa1452300 | MtrunA17_Chr2g0282511 | 84.000 | 50 | 8 | 0 | 45 | 94 | 44 | 93 | 4.56e-26 | 105 |
| Msa1452300 | MtrunA17_Chr2g0283811 | 68.421 | 57 | 18 | 0 | 43 | 99 | 44 | 100 | 9.52e-26 | 100 |
| Msa1452300 | MtrunA17_Chr7g0254161 | 46.316 | 95 | 51 | 0 | 44 | 138 | 99 | 193 | 1.09e-25 | 106 |
| Msa1452300 | MtrunA17_Chr6g0453321 | 67.797 | 59 | 19 | 0 | 44 | 102 | 134 | 192 | 2.11e-25 | 106 |
| Msa1452300 | MtrunA17_Chr4g0042481 | 67.857 | 56 | 18 | 0 | 44 | 99 | 120 | 175 | 1.44e-24 | 103 |
| Msa1452300 | MtrunA17_Chr3g0092111 | 58.904 | 73 | 23 | 1 | 37 | 102 | 120 | 192 | 2.78e-24 | 102 |
| Msa1452300 | MtrunA17_Chr5g0417571 | 67.797 | 59 | 19 | 0 | 44 | 102 | 136 | 194 | 4.52e-24 | 100 |
| Msa1452300 | MtrunA17_Chr6g0460731 | 46.000 | 100 | 50 | 1 | 44 | 143 | 94 | 189 | 4.65e-24 | 100 |
| Msa1452300 | MtrunA17_Chr6g0460721 | 63.158 | 57 | 21 | 0 | 44 | 100 | 87 | 143 | 2.54e-23 | 98.2 |
| Msa1452300 | MtrunA17_Chr5g0417601 | 63.077 | 65 | 23 | 1 | 36 | 99 | 129 | 193 | 3.49e-23 | 98.6 |
| Msa1452300 | MtrunA17_Chr5g0417551 | 66.102 | 59 | 20 | 0 | 44 | 102 | 125 | 183 | 6.06e-23 | 97.8 |
| Msa1452300 | MtrunA17_Chr5g0417561 | 66.102 | 59 | 20 | 0 | 44 | 102 | 117 | 175 | 1.11e-22 | 97.1 |
| Msa1452300 | MtrunA17_Chr4g0047761 | 37.500 | 168 | 76 | 4 | 44 | 209 | 70 | 210 | 6.52e-16 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452300 | AT5G60850.1 | 43.168 | 322 | 113 | 13 | 29 | 328 | 34 | 307 | 1.04e-55 | 184 |
| Msa1452300 | AT1G51700.1 | 76.712 | 73 | 16 | 1 | 43 | 114 | 30 | 102 | 2.33e-33 | 122 |
| Msa1452300 | AT5G65590.1 | 75.758 | 66 | 16 | 0 | 42 | 107 | 37 | 102 | 1.88e-32 | 123 |
| Msa1452300 | AT5G60200.1 | 67.949 | 78 | 19 | 1 | 45 | 122 | 54 | 125 | 3.26e-32 | 121 |
| Msa1452300 | AT5G66940.1 | 56.989 | 93 | 34 | 1 | 42 | 128 | 28 | 120 | 1.95e-31 | 118 |
| Msa1452300 | AT3G45610.1 | 66.234 | 77 | 19 | 1 | 43 | 119 | 37 | 106 | 4.17e-31 | 117 |
| Msa1452300 | AT2G37590.1 | 68.116 | 69 | 22 | 0 | 33 | 101 | 76 | 144 | 1.22e-30 | 118 |
| Msa1452300 | AT2G28510.1 | 42.778 | 180 | 79 | 5 | 41 | 208 | 43 | 210 | 3.87e-30 | 116 |
| Msa1452300 | AT1G07640.1 | 79.310 | 58 | 12 | 0 | 46 | 103 | 21 | 78 | 4.05e-30 | 115 |
| Msa1452300 | AT1G07640.2 | 79.310 | 58 | 12 | 0 | 46 | 103 | 77 | 134 | 5.50e-30 | 117 |
| Msa1452300 | AT1G07640.3 | 79.310 | 58 | 12 | 0 | 46 | 103 | 85 | 142 | 6.88e-30 | 117 |
| Msa1452300 | AT2G28810.2 | 83.019 | 53 | 9 | 0 | 45 | 97 | 76 | 128 | 1.29e-29 | 115 |
| Msa1452300 | AT4G38000.1 | 63.750 | 80 | 20 | 2 | 26 | 96 | 12 | 91 | 1.42e-29 | 114 |
| Msa1452300 | AT3G61850.2 | 65.000 | 80 | 20 | 1 | 30 | 109 | 54 | 125 | 1.55e-29 | 114 |
| Msa1452300 | AT3G61850.3 | 65.000 | 80 | 20 | 1 | 30 | 109 | 54 | 125 | 1.55e-29 | 114 |
| Msa1452300 | AT3G52440.1 | 71.053 | 76 | 17 | 2 | 33 | 108 | 14 | 84 | 1.61e-29 | 113 |
| Msa1452300 | AT3G61850.1 | 65.000 | 80 | 20 | 1 | 30 | 109 | 66 | 137 | 1.67e-29 | 114 |
| Msa1452300 | AT2G28810.1 | 83.019 | 53 | 9 | 0 | 45 | 97 | 93 | 145 | 1.93e-29 | 115 |
| Msa1452300 | AT3G61850.5 | 65.000 | 80 | 20 | 1 | 30 | 109 | 54 | 125 | 2.22e-29 | 114 |
| Msa1452300 | AT3G61850.4 | 65.000 | 80 | 20 | 1 | 30 | 109 | 66 | 137 | 2.50e-29 | 115 |
| Msa1452300 | AT3G52440.2 | 71.053 | 76 | 17 | 2 | 33 | 108 | 33 | 103 | 2.60e-29 | 113 |
| Msa1452300 | AT3G50410.1 | 77.049 | 61 | 14 | 0 | 43 | 103 | 27 | 87 | 3.17e-29 | 113 |
| Msa1452300 | AT3G21270.1 | 88.679 | 53 | 6 | 0 | 46 | 98 | 29 | 81 | 3.72e-29 | 111 |
| Msa1452300 | AT3G55370.1 | 69.118 | 68 | 21 | 0 | 41 | 108 | 71 | 138 | 5.03e-29 | 114 |
| Msa1452300 | AT3G55370.2 | 69.118 | 68 | 21 | 0 | 41 | 108 | 71 | 138 | 6.23e-29 | 114 |
| Msa1452300 | AT3G55370.3 | 69.118 | 68 | 21 | 0 | 41 | 108 | 116 | 183 | 8.33e-29 | 114 |
| Msa1452300 | AT1G28310.1 | 77.966 | 59 | 13 | 0 | 46 | 104 | 27 | 85 | 8.53e-29 | 113 |
| Msa1452300 | AT4G21050.1 | 55.882 | 102 | 38 | 2 | 48 | 143 | 26 | 126 | 1.07e-28 | 110 |
| Msa1452300 | AT5G02460.1 | 75.000 | 60 | 15 | 0 | 41 | 100 | 90 | 149 | 1.08e-28 | 114 |
| Msa1452300 | AT1G28310.2 | 77.966 | 59 | 13 | 0 | 46 | 104 | 51 | 109 | 1.39e-28 | 113 |
| Msa1452300 | AT4G24060.1 | 63.514 | 74 | 21 | 1 | 27 | 100 | 40 | 107 | 4.17e-28 | 112 |
| Msa1452300 | AT5G62940.1 | 69.565 | 69 | 15 | 1 | 28 | 96 | 61 | 123 | 8.26e-28 | 111 |
| Msa1452300 | AT1G21340.1 | 80.357 | 56 | 11 | 0 | 48 | 103 | 40 | 95 | 9.26e-28 | 109 |
| Msa1452300 | AT4G00940.1 | 64.103 | 78 | 28 | 0 | 43 | 120 | 65 | 142 | 3.54e-26 | 105 |
| Msa1452300 | AT4G00940.3 | 64.103 | 78 | 28 | 0 | 43 | 120 | 65 | 142 | 3.54e-26 | 105 |
| Msa1452300 | AT4G00940.2 | 64.103 | 78 | 28 | 0 | 43 | 120 | 65 | 142 | 3.54e-26 | 105 |
| Msa1452300 | AT1G29160.1 | 71.429 | 56 | 16 | 0 | 44 | 99 | 60 | 115 | 2.06e-25 | 100 |
| Msa1452300 | AT2G34140.1 | 71.429 | 56 | 16 | 0 | 44 | 99 | 56 | 111 | 2.34e-25 | 100 |
| Msa1452300 | AT3G47500.1 | 69.492 | 59 | 18 | 0 | 44 | 102 | 108 | 166 | 2.74e-25 | 105 |
| Msa1452300 | AT1G64620.1 | 61.194 | 67 | 20 | 1 | 29 | 95 | 38 | 98 | 3.93e-25 | 103 |
| Msa1452300 | AT2G46590.1 | 54.023 | 87 | 31 | 2 | 7 | 93 | 38 | 115 | 5.14e-25 | 103 |
| Msa1452300 | AT2G46590.2 | 54.023 | 87 | 31 | 2 | 7 | 93 | 50 | 127 | 5.79e-25 | 103 |
| Msa1452300 | AT5G39660.3 | 69.643 | 56 | 17 | 0 | 44 | 99 | 136 | 191 | 1.10e-24 | 104 |
| Msa1452300 | AT5G39660.1 | 69.643 | 56 | 17 | 0 | 44 | 99 | 136 | 191 | 1.10e-24 | 104 |
| Msa1452300 | AT5G39660.2 | 69.643 | 56 | 17 | 0 | 44 | 99 | 136 | 191 | 1.10e-24 | 104 |
| Msa1452300 | AT5G62430.1 | 64.407 | 59 | 21 | 0 | 44 | 102 | 52 | 110 | 4.08e-24 | 100 |
| Msa1452300 | AT1G47655.1 | 74.510 | 51 | 13 | 0 | 44 | 94 | 27 | 77 | 6.25e-24 | 97.8 |
| Msa1452300 | AT1G69570.1 | 69.643 | 56 | 17 | 0 | 44 | 99 | 130 | 185 | 6.54e-24 | 101 |
| Msa1452300 | AT4G21040.1 | 42.069 | 145 | 67 | 3 | 48 | 175 | 27 | 171 | 4.22e-23 | 96.3 |
| Msa1452300 | AT1G26790.1 | 66.071 | 56 | 19 | 0 | 44 | 99 | 109 | 164 | 4.45e-23 | 98.6 |
| Msa1452300 | AT4G21080.1 | 68.966 | 58 | 17 | 1 | 48 | 104 | 27 | 84 | 1.49e-21 | 92.4 |
| Msa1452300 | AT4G21030.1 | 55.882 | 68 | 27 | 1 | 48 | 115 | 23 | 87 | 5.11e-16 | 75.9 |
Find 99 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTAGAGCGTTTGGATTTC+CGG | 0.179446 | tig0033812:-17800 | Msa1452300:intergenic |
| TTCTGGTCCTGGATCGTTGC+TGG | 0.251043 | tig0033812:+18289 | Msa1452300:CDS |
| TCCCCGTCGGCGGCGGTTGC+CGG | 0.258065 | tig0033812:+17781 | Msa1452300:CDS |
| GTTATTGTAGTAACAGAATT+TGG | 0.266870 | tig0033812:-17682 | Msa1452300:intergenic |
| GGTTCAGGTTATTGTTGTTT+TGG | 0.289348 | tig0033812:-17620 | Msa1452300:intergenic |
| GAGGACATTTCATGACTTCT+TGG | 0.303639 | tig0033812:-17641 | Msa1452300:intergenic |
| AAAACAAGCAACGGTGGATT+TGG | 0.307667 | tig0033812:+18344 | Msa1452300:CDS |
| GAGACATTGCCGTTTGGTTT+TGG | 0.311028 | tig0033812:+18089 | Msa1452300:CDS |
| CGGTAACGCTCATCAGCTTT+TGG | 0.328939 | tig0033812:-18187 | Msa1452300:intergenic |
| ACGGTAATGTTAACGTTAAC+GGG | 0.351619 | tig0033812:+18132 | Msa1452300:CDS |
| CAAAAGCTGATGAGCGTTAC+CGG | 0.354847 | tig0033812:+18188 | Msa1452300:CDS |
| ACACCGTTGATCATGGTTAC+TGG | 0.364180 | tig0033812:+18426 | Msa1452300:CDS |
| GTAACAGAATTTGGTGTTGA+TGG | 0.387408 | tig0033812:-17673 | Msa1452300:intergenic |
| TTCTTCTCCGGCGGTGGTGT+TGG | 0.390782 | tig0033812:-17963 | Msa1452300:intergenic |
| TAACCATGATCAACGGTGTT+AGG | 0.392627 | tig0033812:-18422 | Msa1452300:intergenic |
| TTCCGGCAACCGCCGCCGAC+GGG | 0.393278 | tig0033812:-17783 | Msa1452300:intergenic |
| AACGGTAATGTTAACGTTAA+CGG | 0.394532 | tig0033812:+18131 | Msa1452300:CDS |
| ATAGGTGCTGGTGCTGGTGG+GGG | 0.397991 | tig0033812:+18260 | Msa1452300:CDS |
| CGCCGCCGACGGGGACGTTA+CGG | 0.405897 | tig0033812:-17773 | Msa1452300:intergenic |
| AATATAGGTGCTGGTGCTGG+TGG | 0.411942 | tig0033812:+18257 | Msa1452300:CDS |
| GGCGCCTCCGGTGGAGTTGT+CGG | 0.413936 | tig0033812:-17861 | Msa1452300:intergenic |
| TATAGGTGCTGGTGCTGGTG+GGG | 0.419125 | tig0033812:+18259 | Msa1452300:CDS |
| CAACGGTGGATTTGGATCGT+TGG | 0.423030 | tig0033812:+18352 | Msa1452300:CDS |
| ATTTCATGACTTCTTGGTTC+AGG | 0.424145 | tig0033812:-17635 | Msa1452300:intergenic |
| ATATAGGTGCTGGTGCTGGT+GGG | 0.429106 | tig0033812:+18258 | Msa1452300:CDS |
| CACCGCAGCGGCGGTGAGGC+TGG | 0.433116 | tig0033812:-17922 | Msa1452300:intergenic |
| AAACGGCAATGTCTCGTTAG+AGG | 0.437377 | tig0033812:-18081 | Msa1452300:intergenic |
| GGTTCCTCCGGCGCCTCCGA+TGG | 0.440934 | tig0033812:-17553 | Msa1452300:intergenic |
| GCCTCCGCCACCGAAGAATC+TGG | 0.443448 | tig0033812:-17574 | Msa1452300:intergenic |
| AGACGCATTGAAGTTGTTAC+CGG | 0.443650 | tig0033812:+18232 | Msa1452300:CDS |
| GTGGATTTGGATCGTTGGAT+TGG | 0.444872 | tig0033812:+18357 | Msa1452300:CDS |
| CTTCCTAACACCGTTGATCA+TGG | 0.449712 | tig0033812:+18419 | Msa1452300:CDS |
| TCCGGCGCCTCCGATGGAAC+CGG | 0.454317 | tig0033812:-17547 | Msa1452300:intergenic |
| TCGGTGGCGGAGGCGGTGAT+CGG | 0.459343 | tig0033812:+17583 | Msa1452300:CDS |
| TTTCCGGCAACCGCCGCCGA+CGG | 0.459774 | tig0033812:-17784 | Msa1452300:intergenic |
| CAGCCTCACCGCCGCTGCGG+TGG | 0.464633 | tig0033812:+17923 | Msa1452300:CDS |
| AGATTCTTCGGTGGCGGAGG+CGG | 0.473172 | tig0033812:+17576 | Msa1452300:CDS |
| TCACACTCAATGGTCTGATC+AGG | 0.473669 | tig0033812:+18451 | Msa1452300:CDS |
| GCCGGAGGAACCAGATTCTT+CGG | 0.474219 | tig0033812:+17564 | Msa1452300:CDS |
| ATCGGAGGCGCCGGTTCCAT+CGG | 0.474940 | tig0033812:+17537 | Msa1452300:CDS |
| AAGTTGTTACCGGAGAATAT+AGG | 0.476958 | tig0033812:+18242 | Msa1452300:CDS |
| TAACGTTAACATTACCGTTA+CGG | 0.477277 | tig0033812:-18127 | Msa1452300:intergenic |
| GATTCACTTGAACAAGGAAC+AGG | 0.481996 | tig0033812:+18008 | Msa1452300:CDS |
| GGAACTCTCACTGCTGGAAT+GGG | 0.482309 | tig0033812:-17901 | Msa1452300:intergenic |
| TGGAACTCTCACTGCTGGAA+TGG | 0.493236 | tig0033812:-17902 | Msa1452300:intergenic |
| TCTAACGAGACATTGCCGTT+TGG | 0.499608 | tig0033812:+18083 | Msa1452300:CDS |
| ACCAGATTCTTCGGTGGCGG+AGG | 0.500004 | tig0033812:+17573 | Msa1452300:CDS |
| GACAACTCCACCGGAGGCGC+CGG | 0.504458 | tig0033812:+17863 | Msa1452300:CDS |
| GCCGGTTCCATCGGAGGCGC+CGG | 0.505061 | tig0033812:+17546 | Msa1452300:CDS |
| ACCGAAGAATCTGGTTCCTC+CGG | 0.507560 | tig0033812:-17565 | Msa1452300:intergenic |
| GATGGAACCGGCGCCTCCGA+TGG | 0.508707 | tig0033812:-17535 | Msa1452300:intergenic |
| CCATGGTCCAGCAACGATCC+AGG | 0.515665 | tig0033812:-18296 | Msa1452300:intergenic |
| GAGGCTGGAACTCTCACTGC+TGG | 0.519133 | tig0033812:-17907 | Msa1452300:intergenic |
| TCCGGCAACCGCCGCCGACG+GGG | 0.522832 | tig0033812:-17782 | Msa1452300:intergenic |
| TGCCGACGTTACTGGACTAA+AGG | 0.527907 | tig0033812:+17741 | Msa1452300:CDS |
| CAACATTCCATCGGAGGCGC+CGG | 0.528845 | tig0033812:+17528 | Msa1452300:CDS |
| TTATTCTCCGGCGCCTCCGG+TGG | 0.532938 | tig0033812:-17870 | Msa1452300:intergenic |
| CAGCCACCGCAGCGGCGGTG+AGG | 0.533594 | tig0033812:-17926 | Msa1452300:intergenic |
| CTCCGTAACGTCCCCGTCGG+CGG | 0.535012 | tig0033812:+17771 | Msa1452300:CDS |
| ATGATGCGTCGTCGTTTCAG+TGG | 0.549551 | tig0033812:+18159 | Msa1452300:CDS |
| TCGTTGGATTGGAATGGTGA+TGG | 0.550292 | tig0033812:+18368 | Msa1452300:CDS |
| GGTTCCATCGGAGGCGCCGG+AGG | 0.555949 | tig0033812:+17549 | Msa1452300:CDS |
| TTTGGATCGTTGGATTGGAA+TGG | 0.568406 | tig0033812:+18362 | Msa1452300:CDS |
| TGGGAGTTAGACTTATTCTC+CGG | 0.569296 | tig0033812:-17882 | Msa1452300:intergenic |
| TTCAGAACCAACACCACCGC+CGG | 0.573448 | tig0033812:+17956 | Msa1452300:CDS |
| GTTACTGGAATCACACTCAA+TGG | 0.574806 | tig0033812:+18441 | Msa1452300:CDS |
| TTACCGGAGAATATAGGTGC+TGG | 0.577924 | tig0033812:+18248 | Msa1452300:CDS |
| GTCCTCCGTAACGTCCCCGT+CGG | 0.580488 | tig0033812:+17768 | Msa1452300:CDS |
| CGGTAAAACAGTGGAATCTG+AGG | 0.581795 | tig0033812:-17841 | Msa1452300:intergenic |
| TGTTTCAGCCACCGCAGCGG+CGG | 0.589914 | tig0033812:-17931 | Msa1452300:intergenic |
| GAGAATATAGGTGCTGGTGC+TGG | 0.591108 | tig0033812:+18254 | Msa1452300:CDS |
| TTCCAGCCTCACCGCCGCTG+CGG | 0.594936 | tig0033812:+17920 | Msa1452300:CDS |
| GGAACCAGATTCTTCGGTGG+CGG | 0.595461 | tig0033812:+17570 | Msa1452300:CDS |
| GCACCAGCACCTATATTCTC+CGG | 0.599864 | tig0033812:-18251 | Msa1452300:intergenic |
| GGAGGCGCCGGTTCCATCGG+AGG | 0.600395 | tig0033812:+17540 | Msa1452300:CDS |
| AGAAGTGACGAGGCTGAGAG+AGG | 0.604907 | tig0033812:-17710 | Msa1452300:intergenic |
| GAACAAGGAACAGGTGATTG+TGG | 0.605175 | tig0033812:+18017 | Msa1452300:CDS |
| TTACCGATACCAAAACCAAA+CGG | 0.611130 | tig0033812:-18098 | Msa1452300:intergenic |
| CTGCAGAGTAAAACAAGCAA+CGG | 0.614794 | tig0033812:+18335 | Msa1452300:CDS |
| CCTGGATCGTTGCTGGACCA+TGG | 0.617986 | tig0033812:+18296 | Msa1452300:CDS |
| GAGAATGATTCACTTGAACA+AGG | 0.621864 | tig0033812:+18002 | Msa1452300:CDS |
| CAGAGTAAAACAAGCAACGG+TGG | 0.633363 | tig0033812:+18338 | Msa1452300:CDS |
| GAGATACAACATTCCATCGG+AGG | 0.634291 | tig0033812:+17522 | Msa1452300:CDS |
| GCAAAGAGAAATCAATACCA+TGG | 0.638840 | tig0033812:-18313 | Msa1452300:intergenic |
| AACTGTTTCAGCCACCGCAG+CGG | 0.652527 | tig0033812:-17934 | Msa1452300:intergenic |
| CGCCGACGGGGACGTTACGG+AGG | 0.652529 | tig0033812:-17770 | Msa1452300:intergenic |
| ATCGGTAACGATAACCGTAA+CGG | 0.654058 | tig0033812:+18113 | Msa1452300:CDS |
| TAAAACAGTGGAATCTGAGG+AGG | 0.660488 | tig0033812:-17838 | Msa1452300:intergenic |
| TTTACCGACAACTCCACCGG+AGG | 0.660654 | tig0033812:+17857 | Msa1452300:CDS |
| CGCCTTTAGTCCAGTAACGT+CGG | 0.661444 | tig0033812:-17743 | Msa1452300:intergenic |
| GATGGTGGTGCAGATCATCA+AGG | 0.664273 | tig0033812:+18386 | Msa1452300:CDS |
| CAGGAGATACAACATTCCAT+CGG | 0.667929 | tig0033812:+17519 | Msa1452300:CDS |
| TGGAGTTGTCGGTAAAACAG+TGG | 0.668985 | tig0033812:-17850 | Msa1452300:intergenic |
| GGAGGAACCAGATTCTTCGG+TGG | 0.672184 | tig0033812:+17567 | Msa1452300:CDS |
| ATTCCAGTAACCATGATCAA+CGG | 0.674918 | tig0033812:-18429 | Msa1452300:intergenic |
| CCGGAGAAGAAAATCAACAA+AGG | 0.680379 | tig0033812:+17975 | Msa1452300:CDS |
| TTGGATTGGAATGGTGATGG+TGG | 0.685796 | tig0033812:+18371 | Msa1452300:CDS |
| CGACGTTACTGGACTAAAGG+CGG | 0.694270 | tig0033812:+17744 | Msa1452300:CDS |
| GTGTTGATGGAGTCACAGCG+AGG | 0.726737 | tig0033812:-17660 | Msa1452290:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GTTATTGTAGTAACAGAATT+TGG | - | tig0033812:17685-17704 | Msa1452300:intergenic | 25.0% |
| ! | GTTATTGTAGTAACAGAATT+TGG | - | tig0033812:17685-17704 | Msa1452300:intergenic | 25.0% |
| !!! | AGGTTATTGTTGTTTTGGTT+GGG | - | tig0033812:17618-17637 | Msa1452300:intergenic | 30.0% |
| TAACGTTAACATTACCGTTA+CGG | - | tig0033812:18130-18149 | Msa1452300:intergenic | 30.0% | |
| AACGGTAATGTTAACGTTAA+CGG | + | tig0033812:18131-18150 | Msa1452300:CDS | 30.0% | |
| !! | TTCATTATGTTTTTGATCGC+CGG | - | tig0033812:18210-18229 | Msa1452300:intergenic | 30.0% |
| !!! | AGGTTATTGTTGTTTTGGTT+GGG | - | tig0033812:17618-17637 | Msa1452300:intergenic | 30.0% |
| TAACGTTAACATTACCGTTA+CGG | - | tig0033812:18130-18149 | Msa1452300:intergenic | 30.0% | |
| AACGGTAATGTTAACGTTAA+CGG | + | tig0033812:18131-18150 | Msa1452300:CDS | 30.0% | |
| !! | TTCATTATGTTTTTGATCGC+CGG | - | tig0033812:18210-18229 | Msa1452300:intergenic | 30.0% |
| !!! | CAGGTTATTGTTGTTTTGGT+TGG | - | tig0033812:17619-17638 | Msa1452300:intergenic | 35.0% |
| !!! | GGTTCAGGTTATTGTTGTTT+TGG | - | tig0033812:17623-17642 | Msa1452300:intergenic | 35.0% |
| ATTTCATGACTTCTTGGTTC+AGG | - | tig0033812:17638-17657 | Msa1452300:intergenic | 35.0% | |
| !! | GTAACAGAATTTGGTGTTGA+TGG | - | tig0033812:17676-17695 | Msa1452300:intergenic | 35.0% |
| !!! | TCTGAGGAGGAAGATTTTTT+TGG | - | tig0033812:17828-17847 | Msa1452300:intergenic | 35.0% |
| !!! | CCTTTGTTGATTTTCTTCTC+CGG | - | tig0033812:17978-17997 | Msa1452300:intergenic | 35.0% |
| GAGAATGATTCACTTGAACA+AGG | + | tig0033812:18002-18021 | Msa1452300:CDS | 35.0% | |
| TTACCGATACCAAAACCAAA+CGG | - | tig0033812:18101-18120 | Msa1452300:intergenic | 35.0% | |
| ACGGTAATGTTAACGTTAAC+GGG | + | tig0033812:18132-18151 | Msa1452300:CDS | 35.0% | |
| AAGTTGTTACCGGAGAATAT+AGG | + | tig0033812:18242-18261 | Msa1452300:CDS | 35.0% | |
| GCAAAGAGAAATCAATACCA+TGG | - | tig0033812:18316-18335 | Msa1452300:intergenic | 35.0% | |
| ATTCCAGTAACCATGATCAA+CGG | - | tig0033812:18432-18451 | Msa1452300:intergenic | 35.0% | |
| !!! | CAGGTTATTGTTGTTTTGGT+TGG | - | tig0033812:17619-17638 | Msa1452300:intergenic | 35.0% |
| !!! | GGTTCAGGTTATTGTTGTTT+TGG | - | tig0033812:17623-17642 | Msa1452300:intergenic | 35.0% |
| ATTTCATGACTTCTTGGTTC+AGG | - | tig0033812:17638-17657 | Msa1452300:intergenic | 35.0% | |
| !! | GTAACAGAATTTGGTGTTGA+TGG | - | tig0033812:17676-17695 | Msa1452300:intergenic | 35.0% |
| !!! | TCTGAGGAGGAAGATTTTTT+TGG | - | tig0033812:17828-17847 | Msa1452300:intergenic | 35.0% |
| !!! | CCTTTGTTGATTTTCTTCTC+CGG | - | tig0033812:17978-17997 | Msa1452300:intergenic | 35.0% |
| GAGAATGATTCACTTGAACA+AGG | + | tig0033812:18002-18021 | Msa1452300:CDS | 35.0% | |
| TTACCGATACCAAAACCAAA+CGG | - | tig0033812:18101-18120 | Msa1452300:intergenic | 35.0% | |
| ACGGTAATGTTAACGTTAAC+GGG | + | tig0033812:18132-18151 | Msa1452300:CDS | 35.0% | |
| AAGTTGTTACCGGAGAATAT+AGG | + | tig0033812:18242-18261 | Msa1452300:CDS | 35.0% | |
| GCAAAGAGAAATCAATACCA+TGG | - | tig0033812:18316-18335 | Msa1452300:intergenic | 35.0% | |
| ATTCCAGTAACCATGATCAA+CGG | - | tig0033812:18432-18451 | Msa1452300:intergenic | 35.0% | |
| CAGGAGATACAACATTCCAT+CGG | + | tig0033812:17519-17538 | Msa1452300:CDS | 40.0% | |
| GAGGACATTTCATGACTTCT+TGG | - | tig0033812:17644-17663 | Msa1452300:intergenic | 40.0% | |
| !!! | TTTTGGTTTGCTAGAGCGTT+TGG | - | tig0033812:17811-17830 | Msa1452300:intergenic | 40.0% |
| TAAAACAGTGGAATCTGAGG+AGG | - | tig0033812:17841-17860 | Msa1452300:intergenic | 40.0% | |
| TGGGAGTTAGACTTATTCTC+CGG | - | tig0033812:17885-17904 | Msa1452300:intergenic | 40.0% | |
| !!! | TTGTTGATTTTCTTCTCCGG+CGG | - | tig0033812:17975-17994 | Msa1452300:intergenic | 40.0% |
| CCGGAGAAGAAAATCAACAA+AGG | + | tig0033812:17975-17994 | Msa1452300:CDS | 40.0% | |
| GATTCACTTGAACAAGGAAC+AGG | + | tig0033812:18008-18027 | Msa1452300:CDS | 40.0% | |
| !!! | TTGCCGTTTGGTTTTGGTAT+CGG | + | tig0033812:18095-18114 | Msa1452300:CDS | 40.0% |
| ATCGGTAACGATAACCGTAA+CGG | + | tig0033812:18113-18132 | Msa1452300:CDS | 40.0% | |
| AGACGCATTGAAGTTGTTAC+CGG | + | tig0033812:18232-18251 | Msa1452300:CDS | 40.0% | |
| CTGCAGAGTAAAACAAGCAA+CGG | + | tig0033812:18335-18354 | Msa1452300:CDS | 40.0% | |
| ! | AAAACAAGCAACGGTGGATT+TGG | + | tig0033812:18344-18363 | Msa1452300:CDS | 40.0% |
| ! | TTTGGATCGTTGGATTGGAA+TGG | + | tig0033812:18362-18381 | Msa1452300:CDS | 40.0% |
| TAACCATGATCAACGGTGTT+AGG | - | tig0033812:18425-18444 | Msa1452300:intergenic | 40.0% | |
| GTTACTGGAATCACACTCAA+TGG | + | tig0033812:18441-18460 | Msa1452300:CDS | 40.0% | |
| CAGGAGATACAACATTCCAT+CGG | + | tig0033812:17519-17538 | Msa1452300:CDS | 40.0% | |
| GAGGACATTTCATGACTTCT+TGG | - | tig0033812:17644-17663 | Msa1452300:intergenic | 40.0% | |
| !!! | TTTTGGTTTGCTAGAGCGTT+TGG | - | tig0033812:17811-17830 | Msa1452300:intergenic | 40.0% |
| TAAAACAGTGGAATCTGAGG+AGG | - | tig0033812:17841-17860 | Msa1452300:intergenic | 40.0% | |
| TGGGAGTTAGACTTATTCTC+CGG | - | tig0033812:17885-17904 | Msa1452300:intergenic | 40.0% | |
| !!! | TTGTTGATTTTCTTCTCCGG+CGG | - | tig0033812:17975-17994 | Msa1452300:intergenic | 40.0% |
| CCGGAGAAGAAAATCAACAA+AGG | + | tig0033812:17975-17994 | Msa1452300:CDS | 40.0% | |
| GATTCACTTGAACAAGGAAC+AGG | + | tig0033812:18008-18027 | Msa1452300:CDS | 40.0% | |
| !!! | TTGCCGTTTGGTTTTGGTAT+CGG | + | tig0033812:18095-18114 | Msa1452300:CDS | 40.0% |
| ATCGGTAACGATAACCGTAA+CGG | + | tig0033812:18113-18132 | Msa1452300:CDS | 40.0% | |
| AGACGCATTGAAGTTGTTAC+CGG | + | tig0033812:18232-18251 | Msa1452300:CDS | 40.0% | |
| CTGCAGAGTAAAACAAGCAA+CGG | + | tig0033812:18335-18354 | Msa1452300:CDS | 40.0% | |
| ! | AAAACAAGCAACGGTGGATT+TGG | + | tig0033812:18344-18363 | Msa1452300:CDS | 40.0% |
| ! | TTTGGATCGTTGGATTGGAA+TGG | + | tig0033812:18362-18381 | Msa1452300:CDS | 40.0% |
| TAACCATGATCAACGGTGTT+AGG | - | tig0033812:18425-18444 | Msa1452300:intergenic | 40.0% | |
| GTTACTGGAATCACACTCAA+TGG | + | tig0033812:18441-18460 | Msa1452300:CDS | 40.0% | |
| GAGATACAACATTCCATCGG+AGG | + | tig0033812:17522-17541 | Msa1452300:CDS | 45.0% | |
| ! | CAGTTTTTGCAGAAGTGACG+AGG | - | tig0033812:17723-17742 | Msa1452300:intergenic | 45.0% |
| ! | TGCTAGAGCGTTTGGATTTC+CGG | - | tig0033812:17803-17822 | Msa1452300:intergenic | 45.0% |
| CGGTAAAACAGTGGAATCTG+AGG | - | tig0033812:17844-17863 | Msa1452300:intergenic | 45.0% | |
| TGGAGTTGTCGGTAAAACAG+TGG | - | tig0033812:17853-17872 | Msa1452300:intergenic | 45.0% | |
| ! | TGTTTTACCGACAACTCCAC+CGG | + | tig0033812:17854-17873 | Msa1452300:CDS | 45.0% |
| GAACAAGGAACAGGTGATTG+TGG | + | tig0033812:18017-18036 | Msa1452300:CDS | 45.0% | |
| AAACGGCAATGTCTCGTTAG+AGG | - | tig0033812:18084-18103 | Msa1452300:intergenic | 45.0% | |
| TCTAACGAGACATTGCCGTT+TGG | + | tig0033812:18083-18102 | Msa1452300:CDS | 45.0% | |
| !! | GAGACATTGCCGTTTGGTTT+TGG | + | tig0033812:18089-18108 | Msa1452300:CDS | 45.0% |
| CAAAAGCTGATGAGCGTTAC+CGG | + | tig0033812:18188-18207 | Msa1452300:CDS | 45.0% | |
| TTACCGGAGAATATAGGTGC+TGG | + | tig0033812:18248-18267 | Msa1452300:CDS | 45.0% | |
| CAGAGTAAAACAAGCAACGG+TGG | + | tig0033812:18338-18357 | Msa1452300:CDS | 45.0% | |
| GTGGATTTGGATCGTTGGAT+TGG | + | tig0033812:18357-18376 | Msa1452300:CDS | 45.0% | |
| ! | TCGTTGGATTGGAATGGTGA+TGG | + | tig0033812:18368-18387 | Msa1452300:CDS | 45.0% |
| !! | TTGGATTGGAATGGTGATGG+TGG | + | tig0033812:18371-18390 | Msa1452300:CDS | 45.0% |
| CTTCCTAACACCGTTGATCA+TGG | + | tig0033812:18419-18438 | Msa1452300:CDS | 45.0% | |
| ACACCGTTGATCATGGTTAC+TGG | + | tig0033812:18426-18445 | Msa1452300:CDS | 45.0% | |
| TCACACTCAATGGTCTGATC+AGG | + | tig0033812:18451-18470 | Msa1452300:CDS | 45.0% | |
| GAGATACAACATTCCATCGG+AGG | + | tig0033812:17522-17541 | Msa1452300:CDS | 45.0% | |
| ! | CAGTTTTTGCAGAAGTGACG+AGG | - | tig0033812:17723-17742 | Msa1452300:intergenic | 45.0% |
| ! | TGCTAGAGCGTTTGGATTTC+CGG | - | tig0033812:17803-17822 | Msa1452300:intergenic | 45.0% |
| CGGTAAAACAGTGGAATCTG+AGG | - | tig0033812:17844-17863 | Msa1452300:intergenic | 45.0% | |
| TGGAGTTGTCGGTAAAACAG+TGG | - | tig0033812:17853-17872 | Msa1452300:intergenic | 45.0% | |
| ! | TGTTTTACCGACAACTCCAC+CGG | + | tig0033812:17854-17873 | Msa1452300:CDS | 45.0% |
| GAACAAGGAACAGGTGATTG+TGG | + | tig0033812:18017-18036 | Msa1452300:CDS | 45.0% | |
| AAACGGCAATGTCTCGTTAG+AGG | - | tig0033812:18084-18103 | Msa1452300:intergenic | 45.0% | |
| TCTAACGAGACATTGCCGTT+TGG | + | tig0033812:18083-18102 | Msa1452300:CDS | 45.0% | |
| !! | GAGACATTGCCGTTTGGTTT+TGG | + | tig0033812:18089-18108 | Msa1452300:CDS | 45.0% |
| CAAAAGCTGATGAGCGTTAC+CGG | + | tig0033812:18188-18207 | Msa1452300:CDS | 45.0% | |
| TTACCGGAGAATATAGGTGC+TGG | + | tig0033812:18248-18267 | Msa1452300:CDS | 45.0% | |
| CAGAGTAAAACAAGCAACGG+TGG | + | tig0033812:18338-18357 | Msa1452300:CDS | 45.0% | |
| GTGGATTTGGATCGTTGGAT+TGG | + | tig0033812:18357-18376 | Msa1452300:CDS | 45.0% | |
| ! | TCGTTGGATTGGAATGGTGA+TGG | + | tig0033812:18368-18387 | Msa1452300:CDS | 45.0% |
| !! | TTGGATTGGAATGGTGATGG+TGG | + | tig0033812:18371-18390 | Msa1452300:CDS | 45.0% |
| CTTCCTAACACCGTTGATCA+TGG | + | tig0033812:18419-18438 | Msa1452300:CDS | 45.0% | |
| ACACCGTTGATCATGGTTAC+TGG | + | tig0033812:18426-18445 | Msa1452300:CDS | 45.0% | |
| TCACACTCAATGGTCTGATC+AGG | + | tig0033812:18451-18470 | Msa1452300:CDS | 45.0% | |
| ! | ACCGAAGAATCTGGTTCCTC+CGG | - | tig0033812:17568-17587 | Msa1452300:intergenic | 50.0% |
| GCAAAAACTGCCGACGTTAC+TGG | + | tig0033812:17733-17752 | Msa1452300:CDS | 50.0% | |
| TGCCGACGTTACTGGACTAA+AGG | + | tig0033812:17741-17760 | Msa1452300:CDS | 50.0% | |
| CGCCTTTAGTCCAGTAACGT+CGG | - | tig0033812:17746-17765 | Msa1452300:intergenic | 50.0% | |
| CGACGTTACTGGACTAAAGG+CGG | + | tig0033812:17744-17763 | Msa1452300:CDS | 50.0% | |
| GGAACTCTCACTGCTGGAAT+GGG | - | tig0033812:17904-17923 | Msa1452300:intergenic | 50.0% | |
| TGGAACTCTCACTGCTGGAA+TGG | - | tig0033812:17905-17924 | Msa1452300:intergenic | 50.0% | |
| ! | TTGATTTTCTTCTCCGGCGG+TGG | - | tig0033812:17972-17991 | Msa1452300:intergenic | 50.0% |
| ATGATGCGTCGTCGTTTCAG+TGG | + | tig0033812:18159-18178 | Msa1452300:CDS | 50.0% | |
| ! | CGGTAACGCTCATCAGCTTT+TGG | - | tig0033812:18190-18209 | Msa1452300:intergenic | 50.0% |
| GCACCAGCACCTATATTCTC+CGG | - | tig0033812:18254-18273 | Msa1452300:intergenic | 50.0% | |
| !! | GAGAATATAGGTGCTGGTGC+TGG | + | tig0033812:18254-18273 | Msa1452300:CDS | 50.0% |
| !! | AATATAGGTGCTGGTGCTGG+TGG | + | tig0033812:18257-18276 | Msa1452300:CDS | 50.0% |
| !! | ATATAGGTGCTGGTGCTGGT+GGG | + | tig0033812:18258-18277 | Msa1452300:CDS | 50.0% |
| ! | CAACGGTGGATTTGGATCGT+TGG | + | tig0033812:18352-18371 | Msa1452300:CDS | 50.0% |
| ! | GATGGTGGTGCAGATCATCA+AGG | + | tig0033812:18386-18405 | Msa1452300:CDS | 50.0% |
| ! | ACCGAAGAATCTGGTTCCTC+CGG | - | tig0033812:17568-17587 | Msa1452300:intergenic | 50.0% |
| GCAAAAACTGCCGACGTTAC+TGG | + | tig0033812:17733-17752 | Msa1452300:CDS | 50.0% | |
| TGCCGACGTTACTGGACTAA+AGG | + | tig0033812:17741-17760 | Msa1452300:CDS | 50.0% | |
| CGCCTTTAGTCCAGTAACGT+CGG | - | tig0033812:17746-17765 | Msa1452300:intergenic | 50.0% | |
| CGACGTTACTGGACTAAAGG+CGG | + | tig0033812:17744-17763 | Msa1452300:CDS | 50.0% | |
| GGAACTCTCACTGCTGGAAT+GGG | - | tig0033812:17904-17923 | Msa1452300:intergenic | 50.0% | |
| TGGAACTCTCACTGCTGGAA+TGG | - | tig0033812:17905-17924 | Msa1452300:intergenic | 50.0% | |
| ! | TTGATTTTCTTCTCCGGCGG+TGG | - | tig0033812:17972-17991 | Msa1452300:intergenic | 50.0% |
| ATGATGCGTCGTCGTTTCAG+TGG | + | tig0033812:18159-18178 | Msa1452300:CDS | 50.0% | |
| ! | CGGTAACGCTCATCAGCTTT+TGG | - | tig0033812:18190-18209 | Msa1452300:intergenic | 50.0% |
| GCACCAGCACCTATATTCTC+CGG | - | tig0033812:18254-18273 | Msa1452300:intergenic | 50.0% | |
| !! | GAGAATATAGGTGCTGGTGC+TGG | + | tig0033812:18254-18273 | Msa1452300:CDS | 50.0% |
| !! | AATATAGGTGCTGGTGCTGG+TGG | + | tig0033812:18257-18276 | Msa1452300:CDS | 50.0% |
| !! | ATATAGGTGCTGGTGCTGGT+GGG | + | tig0033812:18258-18277 | Msa1452300:CDS | 50.0% |
| ! | CAACGGTGGATTTGGATCGT+TGG | + | tig0033812:18352-18371 | Msa1452300:CDS | 50.0% |
| ! | GATGGTGGTGCAGATCATCA+AGG | + | tig0033812:18386-18405 | Msa1452300:CDS | 50.0% |
| GCCGGAGGAACCAGATTCTT+CGG | + | tig0033812:17564-17583 | Msa1452300:CDS | 55.0% | |
| GGAGGAACCAGATTCTTCGG+TGG | + | tig0033812:17567-17586 | Msa1452300:CDS | 55.0% | |
| GGAACCAGATTCTTCGGTGG+CGG | + | tig0033812:17570-17589 | Msa1452300:CDS | 55.0% | |
| ! | GTGTTGATGGAGTCACAGCG+AGG | - | tig0033812:17663-17682 | Msa1452300:intergenic | 55.0% |
| AGAAGTGACGAGGCTGAGAG+AGG | - | tig0033812:17713-17732 | Msa1452300:intergenic | 55.0% | |
| TTTACCGACAACTCCACCGG+AGG | + | tig0033812:17857-17876 | Msa1452300:CDS | 55.0% | |
| AACTGTTTCAGCCACCGCAG+CGG | - | tig0033812:17937-17956 | Msa1452300:intergenic | 55.0% | |
| TTCAGAACCAACACCACCGC+CGG | + | tig0033812:17956-17975 | Msa1452300:CDS | 55.0% | |
| !! | TATAGGTGCTGGTGCTGGTG+GGG | + | tig0033812:18259-18278 | Msa1452300:CDS | 55.0% |
| TTCTGGTCCTGGATCGTTGC+TGG | + | tig0033812:18289-18308 | Msa1452300:CDS | 55.0% | |
| GCCGGAGGAACCAGATTCTT+CGG | + | tig0033812:17564-17583 | Msa1452300:CDS | 55.0% | |
| GGAGGAACCAGATTCTTCGG+TGG | + | tig0033812:17567-17586 | Msa1452300:CDS | 55.0% | |
| GGAACCAGATTCTTCGGTGG+CGG | + | tig0033812:17570-17589 | Msa1452300:CDS | 55.0% | |
| ! | GTGTTGATGGAGTCACAGCG+AGG | - | tig0033812:17663-17682 | Msa1452300:intergenic | 55.0% |
| AGAAGTGACGAGGCTGAGAG+AGG | - | tig0033812:17713-17732 | Msa1452300:intergenic | 55.0% | |
| TTTACCGACAACTCCACCGG+AGG | + | tig0033812:17857-17876 | Msa1452300:CDS | 55.0% | |
| AACTGTTTCAGCCACCGCAG+CGG | - | tig0033812:17937-17956 | Msa1452300:intergenic | 55.0% | |
| TTCAGAACCAACACCACCGC+CGG | + | tig0033812:17956-17975 | Msa1452300:CDS | 55.0% | |
| !! | TATAGGTGCTGGTGCTGGTG+GGG | + | tig0033812:18259-18278 | Msa1452300:CDS | 55.0% |
| TTCTGGTCCTGGATCGTTGC+TGG | + | tig0033812:18289-18308 | Msa1452300:CDS | 55.0% | |
| ! | CAACATTCCATCGGAGGCGC+CGG | + | tig0033812:17528-17547 | Msa1452300:CDS | 60.0% |
| ! | ACCAGATTCTTCGGTGGCGG+AGG | + | tig0033812:17573-17592 | Msa1452300:CDS | 60.0% |
| !! | AGATTCTTCGGTGGCGGAGG+CGG | + | tig0033812:17576-17595 | Msa1452300:CDS | 60.0% |
| GACTTATTCTCCGGCGCCTC+CGG | - | tig0033812:17876-17895 | Msa1452300:intergenic | 60.0% | |
| GAGGCTGGAACTCTCACTGC+TGG | - | tig0033812:17910-17929 | Msa1452300:intergenic | 60.0% | |
| TTCTTCTCCGGCGGTGGTGT+TGG | - | tig0033812:17966-17985 | Msa1452300:intergenic | 60.0% | |
| !! | ATAGGTGCTGGTGCTGGTGG+GGG | + | tig0033812:18260-18279 | Msa1452300:CDS | 60.0% |
| CCATGGTCCAGCAACGATCC+AGG | - | tig0033812:18299-18318 | Msa1452300:intergenic | 60.0% | |
| CCTGGATCGTTGCTGGACCA+TGG | + | tig0033812:18296-18315 | Msa1452300:CDS | 60.0% | |
| ! | CAACATTCCATCGGAGGCGC+CGG | + | tig0033812:17528-17547 | Msa1452300:CDS | 60.0% |
| ! | ACCAGATTCTTCGGTGGCGG+AGG | + | tig0033812:17573-17592 | Msa1452300:CDS | 60.0% |
| !! | AGATTCTTCGGTGGCGGAGG+CGG | + | tig0033812:17576-17595 | Msa1452300:CDS | 60.0% |
| GACTTATTCTCCGGCGCCTC+CGG | - | tig0033812:17876-17895 | Msa1452300:intergenic | 60.0% | |
| GAGGCTGGAACTCTCACTGC+TGG | - | tig0033812:17910-17929 | Msa1452300:intergenic | 60.0% | |
| TTCTTCTCCGGCGGTGGTGT+TGG | - | tig0033812:17966-17985 | Msa1452300:intergenic | 60.0% | |
| !! | ATAGGTGCTGGTGCTGGTGG+GGG | + | tig0033812:18260-18279 | Msa1452300:CDS | 60.0% |
| CCATGGTCCAGCAACGATCC+AGG | - | tig0033812:18299-18318 | Msa1452300:intergenic | 60.0% | |
| CCTGGATCGTTGCTGGACCA+TGG | + | tig0033812:18296-18315 | Msa1452300:CDS | 60.0% | |
| !! | ATCGGAGGCGCCGGTTCCAT+CGG | + | tig0033812:17537-17556 | Msa1452300:CDS | 65.0% |
| GCCTCCGCCACCGAAGAATC+TGG | - | tig0033812:17577-17596 | Msa1452300:intergenic | 65.0% | |
| GTCCTCCGTAACGTCCCCGT+CGG | + | tig0033812:17768-17787 | Msa1452300:CDS | 65.0% | |
| TTATTCTCCGGCGCCTCCGG+TGG | - | tig0033812:17873-17892 | Msa1452300:intergenic | 65.0% | |
| TGTTTCAGCCACCGCAGCGG+CGG | - | tig0033812:17934-17953 | Msa1452300:intergenic | 65.0% | |
| GCTGGTGGGGGTGGTTCTTC+TGG | + | tig0033812:18272-18291 | Msa1452300:CDS | 65.0% | |
| GGGGGTGGTTCTTCTGGTCC+TGG | + | tig0033812:18278-18297 | Msa1452300:CDS | 65.0% | |
| !! | ATCGGAGGCGCCGGTTCCAT+CGG | + | tig0033812:17537-17556 | Msa1452300:CDS | 65.0% |
| GCCTCCGCCACCGAAGAATC+TGG | - | tig0033812:17577-17596 | Msa1452300:intergenic | 65.0% | |
| GTCCTCCGTAACGTCCCCGT+CGG | + | tig0033812:17768-17787 | Msa1452300:CDS | 65.0% | |
| TTATTCTCCGGCGCCTCCGG+TGG | - | tig0033812:17873-17892 | Msa1452300:intergenic | 65.0% | |
| TGTTTCAGCCACCGCAGCGG+CGG | - | tig0033812:17934-17953 | Msa1452300:intergenic | 65.0% | |
| GCTGGTGGGGGTGGTTCTTC+TGG | + | tig0033812:18272-18291 | Msa1452300:CDS | 65.0% | |
| GGGGGTGGTTCTTCTGGTCC+TGG | + | tig0033812:18278-18297 | Msa1452300:CDS | 65.0% | |
| GATGGAACCGGCGCCTCCGA+TGG | - | tig0033812:17538-17557 | Msa1452300:intergenic | 70.0% | |
| TCCGGCGCCTCCGATGGAAC+CGG | - | tig0033812:17550-17569 | Msa1452300:intergenic | 70.0% | |
| !! | TCGGTGGCGGAGGCGGTGAT+CGG | + | tig0033812:17583-17602 | Msa1452300:CDS | 70.0% |
| CTCCGTAACGTCCCCGTCGG+CGG | + | tig0033812:17771-17790 | Msa1452300:CDS | 70.0% | |
| TTTCCGGCAACCGCCGCCGA+CGG | - | tig0033812:17787-17806 | Msa1452300:intergenic | 70.0% | |
| GGCGCCTCCGGTGGAGTTGT+CGG | - | tig0033812:17864-17883 | Msa1452300:intergenic | 70.0% | |
| ! | GACAACTCCACCGGAGGCGC+CGG | + | tig0033812:17863-17882 | Msa1452300:CDS | 70.0% |
| TTCCAGCCTCACCGCCGCTG+CGG | + | tig0033812:17920-17939 | Msa1452300:CDS | 70.0% | |
| GATGGAACCGGCGCCTCCGA+TGG | - | tig0033812:17538-17557 | Msa1452300:intergenic | 70.0% | |
| TCCGGCGCCTCCGATGGAAC+CGG | - | tig0033812:17550-17569 | Msa1452300:intergenic | 70.0% | |
| !! | TCGGTGGCGGAGGCGGTGAT+CGG | + | tig0033812:17583-17602 | Msa1452300:CDS | 70.0% |
| CTCCGTAACGTCCCCGTCGG+CGG | + | tig0033812:17771-17790 | Msa1452300:CDS | 70.0% | |
| TTTCCGGCAACCGCCGCCGA+CGG | - | tig0033812:17787-17806 | Msa1452300:intergenic | 70.0% | |
| GGCGCCTCCGGTGGAGTTGT+CGG | - | tig0033812:17864-17883 | Msa1452300:intergenic | 70.0% | |
| ! | GACAACTCCACCGGAGGCGC+CGG | + | tig0033812:17863-17882 | Msa1452300:CDS | 70.0% |
| TTCCAGCCTCACCGCCGCTG+CGG | + | tig0033812:17920-17939 | Msa1452300:CDS | 70.0% | |
| !! | GGAGGCGCCGGTTCCATCGG+AGG | + | tig0033812:17540-17559 | Msa1452300:CDS | 75.0% |
| ! | GCCGGTTCCATCGGAGGCGC+CGG | + | tig0033812:17546-17565 | Msa1452300:CDS | 75.0% |
| !! | GGTTCCATCGGAGGCGCCGG+AGG | + | tig0033812:17549-17568 | Msa1452300:CDS | 75.0% |
| GGTTCCTCCGGCGCCTCCGA+TGG | - | tig0033812:17556-17575 | Msa1452300:intergenic | 75.0% | |
| CGCCGACGGGGACGTTACGG+AGG | - | tig0033812:17773-17792 | Msa1452300:intergenic | 75.0% | |
| CGCCGCCGACGGGGACGTTA+CGG | - | tig0033812:17776-17795 | Msa1452300:intergenic | 75.0% | |
| CGTAACGTCCCCGTCGGCGG+CGG | + | tig0033812:17774-17793 | Msa1452300:CDS | 75.0% | |
| TTCCGGCAACCGCCGCCGAC+GGG | - | tig0033812:17786-17805 | Msa1452300:intergenic | 75.0% | |
| !! | GGTGCTGGTGCTGGTGGGGG+TGG | + | tig0033812:18263-18282 | Msa1452300:CDS | 75.0% |
| !! | GGAGGCGCCGGTTCCATCGG+AGG | + | tig0033812:17540-17559 | Msa1452300:CDS | 75.0% |
| ! | GCCGGTTCCATCGGAGGCGC+CGG | + | tig0033812:17546-17565 | Msa1452300:CDS | 75.0% |
| !! | GGTTCCATCGGAGGCGCCGG+AGG | + | tig0033812:17549-17568 | Msa1452300:CDS | 75.0% |
| GGTTCCTCCGGCGCCTCCGA+TGG | - | tig0033812:17556-17575 | Msa1452300:intergenic | 75.0% | |
| CGCCGACGGGGACGTTACGG+AGG | - | tig0033812:17773-17792 | Msa1452300:intergenic | 75.0% | |
| CGCCGCCGACGGGGACGTTA+CGG | - | tig0033812:17776-17795 | Msa1452300:intergenic | 75.0% | |
| CGTAACGTCCCCGTCGGCGG+CGG | + | tig0033812:17774-17793 | Msa1452300:CDS | 75.0% | |
| TTCCGGCAACCGCCGCCGAC+GGG | - | tig0033812:17786-17805 | Msa1452300:intergenic | 75.0% | |
| !! | GGTGCTGGTGCTGGTGGGGG+TGG | + | tig0033812:18263-18282 | Msa1452300:CDS | 75.0% |
| ! | TCCCCGTCGGCGGCGGTTGC+CGG | + | tig0033812:17781-17800 | Msa1452300:CDS | 80.0% |
| ! | TCCGGCAACCGCCGCCGACG+GGG | - | tig0033812:17785-17804 | Msa1452300:intergenic | 80.0% |
| ! | CACCGCAGCGGCGGTGAGGC+TGG | - | tig0033812:17925-17944 | Msa1452300:intergenic | 80.0% |
| ! | CAGCCTCACCGCCGCTGCGG+TGG | + | tig0033812:17923-17942 | Msa1452300:CDS | 80.0% |
| ! | CAGCCACCGCAGCGGCGGTG+AGG | - | tig0033812:17929-17948 | Msa1452300:intergenic | 80.0% |
| ! | TCCCCGTCGGCGGCGGTTGC+CGG | + | tig0033812:17781-17800 | Msa1452300:CDS | 80.0% |
| ! | TCCGGCAACCGCCGCCGACG+GGG | - | tig0033812:17785-17804 | Msa1452300:intergenic | 80.0% |
| ! | CACCGCAGCGGCGGTGAGGC+TGG | - | tig0033812:17925-17944 | Msa1452300:intergenic | 80.0% |
| ! | CAGCCTCACCGCCGCTGCGG+TGG | + | tig0033812:17923-17942 | Msa1452300:CDS | 80.0% |
| ! | CAGCCACCGCAGCGGCGGTG+AGG | - | tig0033812:17929-17948 | Msa1452300:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0033812 | gene | 17516 | 18502 | 17516 | ID=Msa1452300;Name=Msa1452300 |
| tig0033812 | mRNA | 17516 | 18502 | 17516 | ID=Msa1452300-mRNA-1;Parent=Msa1452300;Name=Msa1452300-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|328 |
| tig0033812 | exon | 17516 | 18502 | 17516 | ID=Msa1452300-mRNA-1:exon:18518;Parent=Msa1452300-mRNA-1 |
| tig0033812 | CDS | 17516 | 18502 | 17516 | ID=Msa1452300-mRNA-1:cds;Parent=Msa1452300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
