AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0638030


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638030 MtrunA17_Chr4g0021041 93.532 402 18 5 5 401 6 404 0.0 722
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0638030 AT5G17520.1 68.155 336 101 1 69 398 79 414 2.08e-165 470
Msa0638030 AT5G17520.2 70.978 317 92 0 82 398 36 352 1.20e-163 463
Msa0638030 AT5G17523.1 60.390 154 55 1 69 216 79 232 3.61e-50 170

Find 111 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCGACAGGAATGGCTTTC+TGG 0.160629 4_3:-31538243 Msa0638030:intron
ATTTCCAGCAATGAGATTTC+TGG 0.176884 4_3:+31541908 None:intergenic
AAGAGCATTGAGAGTAAAAT+TGG 0.190905 4_3:+31542140 None:intergenic
ATGCTGGAATCTGGCGCTTT+TGG 0.199585 4_3:-31540433 Msa0638030:CDS
TTGTGTTCACTTACAGAAAT+AGG 0.247904 4_3:+31538785 None:intergenic
AAATTTGTTGGTGGAATATC+TGG 0.287335 4_3:-31539669 Msa0638030:CDS
TGGGAAGATTTCATTACAAT+TGG 0.310319 4_3:-31540413 Msa0638030:CDS
CAAGATGCTGTTAGGTAGAT+AGG 0.317684 4_3:+31540249 None:intergenic
TGCGTGTATGTTGTTGTTGT+TGG 0.322985 4_3:+31542430 None:intergenic
TTTCAATTATGTGTATAGTA+TGG 0.327121 4_3:-31538045 Msa0638030:three_prime_UTR
TGGGGACAGAAATATGATTT+TGG 0.328614 4_3:+31542187 None:intergenic
GCTACCATATTCTATGGATA+TGG 0.332128 4_3:-31538820 Msa0638030:CDS
GCTTACTAAATGCTGGAATC+TGG 0.333611 4_3:-31540442 Msa0638030:CDS
TATCAACAAGGAATTCTTCT+TGG 0.335994 4_3:-31538667 Msa0638030:CDS
TCGTGGGCTACCATATTCTA+TGG 0.338875 4_3:-31538826 Msa0638030:CDS
GCGTGTATGTTGTTGTTGTT+GGG 0.346180 4_3:+31542431 None:intergenic
GGGAAGATTTCATTACAATT+GGG 0.361219 4_3:-31540412 Msa0638030:CDS
AATACTTACAATAAATATAA+TGG 0.361946 4_3:+31537827 None:intergenic
CTTGGCAGCAACTGTCGGTT+TGG 0.363762 4_3:-31538649 Msa0638030:CDS
TCTGTGGCATTTGCAGTAAC+AGG 0.364710 4_3:+31541943 None:intergenic
CTGAATTTCATGAATTACTT+TGG 0.367581 4_3:-31540464 Msa0638030:CDS
ATTCCCATATCCATAGAATA+TGG 0.373480 4_3:+31538816 None:intergenic
ATGAGGAAAAGGAGCATAAC+AGG 0.377636 4_3:+31542308 None:intergenic
GACAATCCTTTCATGTTCTC+AGG 0.378946 4_3:+31539477 None:intergenic
ATTGATGAAGTTTAGACATA+TGG 0.389246 4_3:-31538130 Msa0638030:three_prime_UTR
GCATGGTTACAGTTCACCTT+TGG 0.396273 4_3:-31538206 Msa0638030:CDS
CTGAATCCACGTGTATTGTT+GGG 0.397302 4_3:-31542498 Msa0638030:five_prime_UTR
ATTTACTTACAGGCAAGAAC+TGG 0.402272 4_3:-31539714 Msa0638030:intron
TTGCTTGCAATGCTTGGAAA+TGG 0.408232 4_3:-31539441 Msa0638030:CDS
AATGCCAGAAATCTCATTGC+TGG 0.409511 4_3:-31541912 Msa0638030:CDS
TACTTTGGCTTACTAAATGC+TGG 0.410058 4_3:-31540449 Msa0638030:CDS
TCACTTACATCTAAATTCTC+TGG 0.411129 4_3:-31541984 Msa0638030:CDS
CAACTGTCGGTTTGGTCTCA+TGG 0.412077 4_3:-31538641 Msa0638030:CDS
ATGTTGTTGTTGTTGGGGTC+GGG 0.413245 4_3:+31542437 None:intergenic
ACACCAGTCTTCTCCCATCT+TGG 0.414554 4_3:-31538006 Msa0638030:three_prime_UTR
ACGTTTACCATCTGAGAAAC+AGG 0.420030 4_3:+31539615 None:intergenic
GAGAAAGGTGTTAAATTTGT+TGG 0.432102 4_3:-31539681 Msa0638030:CDS
AAATTTAAAGTTTGTGATGC+CGG 0.438454 4_3:-31538153 Msa0638030:exon
GCACCAGGCAAGATGCTGTT+AGG 0.438842 4_3:+31540241 None:intergenic
AACTATGATTGTAGGTTCAC+TGG 0.442842 4_3:-31538853 Msa0638030:intron
CACTGTATTGCATCTGCAGC+AGG 0.445679 4_3:-31538077 Msa0638030:three_prime_UTR
TATGTTGTTGTTGTTGGGGT+CGG 0.447346 4_3:+31542436 None:intergenic
ATATGTTGTCATTGTTCAGT+TGG 0.460317 4_3:-31540555 Msa0638030:CDS
CTCAATCCTGAGAACATGAA+AGG 0.461004 4_3:-31539483 Msa0638030:CDS
TCTATGTTGCTTGCAATGCT+TGG 0.464120 4_3:-31539447 Msa0638030:CDS
GTCGGGAATAGCAACGTGAT+TGG 0.465849 4_3:+31542454 None:intergenic
CTACCATATTCTATGGATAT+GGG 0.466317 4_3:-31538819 Msa0638030:CDS
TGAAATTGAAGATGAGGAAA+AGG 0.469570 4_3:+31542297 None:intergenic
CATTGTTCAGTTGGCATTAG+CGG 0.471343 4_3:-31540546 Msa0638030:CDS
CAGATATGACTATGAGCAAT+GGG 0.471686 4_3:-31542009 Msa0638030:CDS
GGAATGCTTACTAGTTTGCT+TGG 0.475196 4_3:-31540659 Msa0638030:CDS
TCTGAATCCACGTGTATTGT+TGG 0.486399 4_3:-31542499 Msa0638030:five_prime_UTR
TTCTTCTTGGCAGCAACTGT+CGG 0.491989 4_3:-31538654 Msa0638030:CDS
ACTTCAGTGGTTGTAGTGTC+AGG 0.495916 4_3:-31540494 Msa0638030:CDS
AAGATGCTGTTAGGTAGATA+GGG 0.497941 4_3:+31540250 None:intergenic
GACAGCTATGACAAAGGAAA+TGG 0.500671 4_3:+31540219 None:intergenic
ACTGGAAAACTTTCTGAGAA+AGG 0.503327 4_3:-31539696 Msa0638030:CDS
CTACCTAACAGCATCTTGCC+TGG 0.509297 4_3:-31540244 Msa0638030:CDS
CTTTGCCAAGAAGAGAGAAA+AGG 0.511181 4_3:-31540615 Msa0638030:CDS
ATGTCTAAACTTCATCAATC+CGG 0.513938 4_3:+31538134 None:intergenic
GAAGAGAGAAAAGGAAGCAA+TGG 0.519086 4_3:-31540606 Msa0638030:CDS
GCATTTGCAGTAACAGGAAA+GGG 0.520318 4_3:+31541949 None:intergenic
CAATGACTCAATTCCAAGAT+GGG 0.523169 4_3:+31537993 None:intergenic
GGAAGATTTCATTACAATTG+GGG 0.526329 4_3:-31540411 Msa0638030:CDS
CAAAGTATGAAAGTAGTGAC+AGG 0.529455 4_3:+31540633 None:intergenic
ATAATAATTGATGAAACTCA+TGG 0.534879 4_3:-31542331 Msa0638030:exon
AGCTGTCGTGGCTGTTACCA+TGG 0.536823 4_3:-31540203 Msa0638030:intron
TCAATGACTCAATTCCAAGA+TGG 0.538239 4_3:+31537992 None:intergenic
AAAGGTGTTAAATTTGTTGG+TGG 0.539268 4_3:-31539678 Msa0638030:CDS
AGGTGTTGAAATTGAAGATG+AGG 0.543444 4_3:+31542291 None:intergenic
TGCGGTGGTGTTGTTGACTT+AGG 0.544946 4_3:+31542271 None:intergenic
ATGACAAAGGAAATGGCACC+AGG 0.553392 4_3:+31540226 None:intergenic
AGCCACGACAGCTATGACAA+AGG 0.558295 4_3:+31540213 None:intergenic
GTCGGTTTGGTCTCATGGAT+AGG 0.558576 4_3:-31538636 Msa0638030:intron
AATTGGGTCGGCGTAAGAGA+CGG 0.561241 4_3:+31542157 None:intergenic
TAGGTTCACTGGTTCATCGT+GGG 0.561359 4_3:-31538842 Msa0638030:CDS
TTCCTTTGTCATAGCTGTCG+TGG 0.561699 4_3:-31540215 Msa0638030:CDS
CAGTTTAAACATTATCAACA+AGG 0.561755 4_3:-31538679 Msa0638030:CDS
ATTCCAAGATGGGAGAAGAC+TGG 0.565918 4_3:+31538003 None:intergenic
AGAGCATTGAGAGTAAAATT+GGG 0.567139 4_3:+31542141 None:intergenic
TCATTCTGATCCACCTCACC+AGG 0.568525 4_3:-31542118 Msa0638030:intron
CGTAAGAGACGGTATTGTGT+GGG 0.571118 4_3:+31542168 None:intergenic
GCAGATATGACTATGAGCAA+TGG 0.575223 4_3:-31542010 Msa0638030:CDS
GGCATTTGCAGTAACAGGAA+AGG 0.580392 4_3:+31541948 None:intergenic
GCAATGGTAGTGCAGACACT+TGG 0.582422 4_3:-31540590 Msa0638030:CDS
CAATCTGGATACAGATAATG+TGG 0.583147 4_3:-31540285 Msa0638030:intron
GCGTAAGAGACGGTATTGTG+TGG 0.591804 4_3:+31542167 None:intergenic
GAAGAAGTGGGATATTTGTG+TGG 0.594713 4_3:+31542240 None:intergenic
TGAATCCACGTGTATTGTTG+GGG 0.605461 4_3:-31542497 Msa0638030:five_prime_UTR
CTGCTACGTTACTCTTCATG+TGG 0.609119 4_3:-31539641 Msa0638030:CDS
GTGGATGCCTGTTTCTCAGA+TGG 0.614756 4_3:-31539622 Msa0638030:intron
TAGGTACATACCTGGTGAGG+TGG 0.615484 4_3:+31542108 None:intergenic
CGTGTATGTTGTTGTTGTTG+GGG 0.617385 4_3:+31542432 None:intergenic
CGTATCCCCAACAATACACG+TGG 0.620044 4_3:+31542492 None:intergenic
TGGAGAGACAGTGTAGTGCA+TGG 0.624152 4_3:-31538223 Msa0638030:CDS
CATTGAGAGTAAAATTGGGT+CGG 0.625150 4_3:+31542145 None:intergenic
AAGCATGATTACTTCAGTAG+AGG 0.626595 4_3:+31538106 None:intergenic
GAAGATTTCATTACAATTGG+GGG 0.629398 4_3:-31540410 Msa0638030:CDS
CTGGCATTAAGTAAAATCTG+TGG 0.632705 4_3:+31541927 None:intergenic
ATTTGTGTGGTAGAAAATTG+CGG 0.636258 4_3:+31542253 None:intergenic
AGATGCTGTTAGGTAGATAG+GGG 0.646554 4_3:+31540251 None:intergenic
TTGTTGGTGGAATATCTGGA+TGG 0.651433 4_3:-31539665 Msa0638030:CDS
GGAATAGCAACGTGATTGGA+CGG 0.651889 4_3:+31542458 None:intergenic
GTAGGTTCACTGGTTCATCG+TGG 0.663007 4_3:-31538843 Msa0638030:intron
TCTCGAATGAATAAAGCACG+TGG 0.680027 4_3:+31539408 None:intergenic
GTAAGAGACGGTATTGTGTG+GGG 0.684336 4_3:+31542169 None:intergenic
AAGTCACGTAGAGAAGCCAA+AGG 0.721318 4_3:+31538190 None:intergenic
TGTGTGGTAGAAAATTGCGG+TGG 0.733276 4_3:+31542256 None:intergenic
ATAGCAACGTGATTGGACGG+TGG 0.744269 4_3:+31542461 None:intergenic
GTGTAGGTACATACCTGGTG+AGG 0.751219 4_3:+31542105 None:intergenic
GCTGCAGATGCAATACAGTG+TGG 0.761311 4_3:+31538080 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTCATACTTATTTTTT+GGG + chr4_3:31538710-31538729 None:intergenic 10.0%
!! AAAAAATAAGTATGAAATTT+GGG - chr4_3:31538710-31538729 Msa0638030:intron 10.0%
!!! TATGTTTTTTTATTTTAACT+CGG + chr4_3:31538858-31538877 None:intergenic 10.0%
!! TTTATATACATTTATTAGTT+AGG - chr4_3:31539272-31539291 Msa0638030:intron 10.0%
!!! TAGATTAGTTTTTTTTTTTT+TGG - chr4_3:31541149-31541168 Msa0638030:intron 10.0%
!!! GTATTTTATCTATAAAATAA+AGG + chr4_3:31542021-31542040 None:intergenic 10.0%
!! AATACTTACAATAAATATAA+TGG + chr4_3:31542506-31542525 None:intergenic 10.0%
!!! ATATTTTAATTTTGTTACTG+TGG - chr4_3:31538530-31538549 Msa0638030:intron 15.0%
!!! AATTTCATACTTATTTTTTG+GGG + chr4_3:31538709-31538728 None:intergenic 15.0%
!!! CAAATTTCATACTTATTTTT+TGG + chr4_3:31538711-31538730 None:intergenic 15.0%
!! CAAAAAATAAGTATGAAATT+TGG - chr4_3:31538709-31538728 Msa0638030:intron 15.0%
!! ATTATAACAATCACAATAAA+CGG + chr4_3:31538828-31538847 None:intergenic 15.0%
!! GAGTTAAAATAAAAAAACAT+AGG - chr4_3:31538857-31538876 Msa0638030:intron 15.0%
!! AATAATCAAATATAACCTAA+AGG + chr4_3:31540167-31540186 None:intergenic 15.0%
!!! TTTGAGATTTAATGAAAATT+TGG + chr4_3:31541001-31541020 None:intergenic 15.0%
!! GGTTCAATTTAAAAAATTTA+TGG - chr4_3:31541284-31541303 Msa0638030:intron 15.0%
!! ATAATAATTGATGAAACTCA+TGG - chr4_3:31537999-31538018 Msa0638030:three_prime_UTR 20.0%
!! TGATTAAATTCTTCAATTAC+CGG + chr4_3:31538270-31538289 None:intergenic 20.0%
!!! ACATTTTGTTTTGTTTTGAA+GGG - chr4_3:31538289-31538308 Msa0638030:intron 20.0%
!!! AAAACTAAGCAATCTTTTTA+GGG + chr4_3:31538768-31538787 None:intergenic 20.0%
!!! AAAAACTAAGCAATCTTTTT+AGG + chr4_3:31538769-31538788 None:intergenic 20.0%
!!! AAAGATTGCTTAGTTTTTTA+AGG - chr4_3:31538771-31538790 Msa0638030:intron 20.0%
!!! AAGATTGCTTAGTTTTTTAA+GGG - chr4_3:31538772-31538791 Msa0638030:intron 20.0%
!!! TAAGAAAATGTCTTGTTAAA+CGG - chr4_3:31539022-31539041 Msa0638030:intron 20.0%
!! ATCTTTCTCAATACATAAAA+TGG + chr4_3:31539122-31539141 None:intergenic 20.0%
!! AATAACATATAACAATCTGA+AGG + chr4_3:31540351-31540370 None:intergenic 20.0%
!! TTAAGTTATGTGTTTAACAT+TGG + chr4_3:31540386-31540405 None:intergenic 20.0%
!!! TTTCATTTTCATTTACTTAC+AGG - chr4_3:31540606-31540625 Msa0638030:CDS 20.0%
!!! ATATATGATGAATGTTTTTG+TGG - chr4_3:31540739-31540758 Msa0638030:intron 20.0%
!! ATAAGAAAAAAAATGCATAG+GGG + chr4_3:31540794-31540813 None:intergenic 20.0%
!! CATAAGAAAAAAAATGCATA+GGG + chr4_3:31540795-31540814 None:intergenic 20.0%
!! TCATAAGAAAAAAAATGCAT+AGG + chr4_3:31540796-31540815 None:intergenic 20.0%
!! AAAAAAACTAATCTACAACA+AGG + chr4_3:31541144-31541163 None:intergenic 20.0%
!!! GTTTGATTTGTATTTTGAAT+TGG - chr4_3:31541777-31541796 Msa0638030:intron 20.0%
!! TTTCAATTATGTGTATAGTA+TGG - chr4_3:31542285-31542304 Msa0638030:CDS 20.0%
!!! CACATTTTGTTTTGTTTTGA+AGG - chr4_3:31538288-31538307 Msa0638030:intron 25.0%
! ACCCCTAAAAGAAAAATATT+GGG + chr4_3:31538737-31538756 None:intergenic 25.0%
! CTGAATTTCATGAATTACTT+TGG - chr4_3:31539866-31539885 Msa0638030:intron 25.0%
!! AATTTTACTAATACTAGGCT+GGG + chr4_3:31539984-31540003 None:intergenic 25.0%
!! TAATTTTACTAATACTAGGC+TGG + chr4_3:31539985-31540004 None:intergenic 25.0%
!! CGTCTAATTTTACTAATACT+AGG + chr4_3:31539989-31540008 None:intergenic 25.0%
!! GTAATCTTCTTATTTCCTTT+AGG - chr4_3:31540149-31540168 Msa0638030:intron 25.0%
!!! GAATTCATTTTGACATTTTG+AGG + chr4_3:31540318-31540337 None:intergenic 25.0%
! TGTTTAACATTGGTATGATA+GGG + chr4_3:31540376-31540395 None:intergenic 25.0%
! AAGCACTTAAATGAAAATTC+AGG + chr4_3:31540416-31540435 None:intergenic 25.0%
! GTTAACTAAACCAAGAAATT+TGG - chr4_3:31540521-31540540 Msa0638030:CDS 25.0%
! TCCACTAGAAAACAAAAAAT+GGG + chr4_3:31540819-31540838 None:intergenic 25.0%
!! TATTCATTCGAGATTTTATG+TGG - chr4_3:31540932-31540951 Msa0638030:intron 25.0%
!!! TAAGTTTGTTGTAGAATAGT+TGG - chr4_3:31541208-31541227 Msa0638030:intron 25.0%
! ACAGTAATATGTAGAAAATG+AGG - chr4_3:31541233-31541252 Msa0638030:intron 25.0%
! CACAATAAATCAATTATCAC+TGG + chr4_3:31541350-31541369 None:intergenic 25.0%
! ACCTACAATCATAGTTAAAT+CGG + chr4_3:31541473-31541492 None:intergenic 25.0%
!!! CTTGTTGATAATGTTTAAAC+TGG + chr4_3:31541653-31541672 None:intergenic 25.0%
! CAGTTTAAACATTATCAACA+AGG - chr4_3:31541651-31541670 Msa0638030:intron 25.0%
! GTGTTCACAATCAATAATTA+AGG - chr4_3:31541811-31541830 Msa0638030:intron 25.0%
! TTCACAATCAATAATTAAGG+TGG - chr4_3:31541814-31541833 Msa0638030:intron 25.0%
!! GGTATAACTATTTTATGTAG+TGG - chr4_3:31541835-31541854 Msa0638030:intron 25.0%
! AGAGATGTTGTCAAATTATA+AGG - chr4_3:31541903-31541922 Msa0638030:CDS 25.0%
! GAGATGTTGTCAAATTATAA+GGG - chr4_3:31541904-31541923 Msa0638030:CDS 25.0%
! TAGATAAAATACTGCTGAAA+TGG - chr4_3:31542029-31542048 Msa0638030:intron 25.0%
!! AAATTTAAAGTTTGTGATGC+CGG - chr4_3:31542177-31542196 Msa0638030:CDS 25.0%
! ATTGATGAAGTTTAGACATA+TGG - chr4_3:31542200-31542219 Msa0638030:CDS 25.0%
!! GTAATTAATTAGCGTTTTAC+AGG - chr4_3:31542373-31542392 Msa0638030:five_prime_UTR 25.0%
TGAAATTGAAGATGAGGAAA+AGG + chr4_3:31538036-31538055 None:intergenic 30.0%
ATTTGTGTGGTAGAAAATTG+CGG + chr4_3:31538080-31538099 None:intergenic 30.0%
!! CAGAAATATGATTTTGGTGA+AGG + chr4_3:31538140-31538159 None:intergenic 30.0%
!! AGAGCATTGAGAGTAAAATT+GGG + chr4_3:31538192-31538211 None:intergenic 30.0%
!! AAGAGCATTGAGAGTAAAAT+TGG + chr4_3:31538193-31538212 None:intergenic 30.0%
TCACTTACATCTAAATTCTC+TGG - chr4_3:31538346-31538365 Msa0638030:intron 30.0%
GATTTAAAAATTACCAGCCA+TGG + chr4_3:31538469-31538488 None:intergenic 30.0%
! GCCCCAATATTTTTCTTTTA+GGG - chr4_3:31538732-31538751 Msa0638030:intron 30.0%
CCCCTAAAAGAAAAATATTG+GGG + chr4_3:31538736-31538755 None:intergenic 30.0%
! CCCCAATATTTTTCTTTTAG+GGG - chr4_3:31538733-31538752 Msa0638030:intron 30.0%
GACCCCTAAAAGAAAAATAT+TGG + chr4_3:31538738-31538757 None:intergenic 30.0%
!! TTTTCTTTTAGGGGTCTATT+AGG - chr4_3:31538742-31538761 Msa0638030:intron 30.0%
!!! ATTGCTTAGTTTTTTAAGGG+AGG - chr4_3:31538775-31538794 Msa0638030:intron 30.0%
!!! TTTTTTCAGAGGAACTCAAA+AGG + chr4_3:31539380-31539399 None:intergenic 30.0%
TTAATTCAGCCAAATGAAGT+GGG + chr4_3:31539493-31539512 None:intergenic 30.0%
ATTAATTCAGCCAAATGAAG+TGG + chr4_3:31539494-31539513 None:intergenic 30.0%
TTCATTTGGCTGAATTAATG+AGG - chr4_3:31539495-31539514 Msa0638030:CDS 30.0%
GTACTTTAATCAAACATGCA+TGG - chr4_3:31539588-31539607 Msa0638030:intron 30.0%
ATTGACAATCATGTCACTAA+CGG + chr4_3:31539647-31539666 None:intergenic 30.0%
ATATGTTGTCATTGTTCAGT+TGG - chr4_3:31539775-31539794 Msa0638030:intron 30.0%
ACTGAAGTTGCTAAAAAGTA+CGG + chr4_3:31539824-31539843 None:intergenic 30.0%
TGGGAAGATTTCATTACAAT+TGG - chr4_3:31539917-31539936 Msa0638030:intron 30.0%
GGGAAGATTTCATTACAATT+GGG - chr4_3:31539918-31539937 Msa0638030:intron 30.0%
GGAAGATTTCATTACAATTG+GGG - chr4_3:31539919-31539938 Msa0638030:intron 30.0%
GAAGATTTCATTACAATTGG+GGG - chr4_3:31539920-31539939 Msa0638030:intron 30.0%
AAGGAAAACACTATTACTTG+AGG + chr4_3:31539959-31539978 None:intergenic 30.0%
CTGTATCCAGATTGTAAATT+GGG + chr4_3:31540039-31540058 None:intergenic 30.0%
TCTGTATCCAGATTGTAAAT+TGG + chr4_3:31540040-31540059 None:intergenic 30.0%
AGGAAATAAGAAGATTACCA+TGG + chr4_3:31540147-31540166 None:intergenic 30.0%
! TTATTTCTCAGAACTTAGTC+CGG - chr4_3:31540182-31540201 Msa0638030:intron 30.0%
! ATACATTTTATCATGCAACC+CGG + chr4_3:31540204-31540223 None:intergenic 30.0%
ACATATAACAATCTGAAGGT+GGG + chr4_3:31540347-31540366 None:intergenic 30.0%
AACATATAACAATCTGAAGG+TGG + chr4_3:31540348-31540367 None:intergenic 30.0%
GTGTTTAACATTGGTATGAT+AGG + chr4_3:31540377-31540396 None:intergenic 30.0%
ACATGGAATTCCAAATTTCT+TGG + chr4_3:31540534-31540553 None:intergenic 30.0%
!! GAGAAAGGTGTTAAATTTGT+TGG - chr4_3:31540649-31540668 Msa0638030:CDS 30.0%
!! AAAGGTGTTAAATTTGTTGG+TGG - chr4_3:31540652-31540671 Msa0638030:CDS 30.0%
!! AAATTTGTTGGTGGAATATC+TGG - chr4_3:31540661-31540680 Msa0638030:CDS 30.0%
!!! ACCCATTTTTTGTTTTCTAG+TGG - chr4_3:31540815-31540834 Msa0638030:intron 30.0%
GTCCACTAGAAAACAAAAAA+TGG + chr4_3:31540820-31540839 None:intergenic 30.0%
AACAAGGATTTAACCATAAC+GGG + chr4_3:31541128-31541147 None:intergenic 30.0%
CAACAAGGATTTAACCATAA+CGG + chr4_3:31541129-31541148 None:intergenic 30.0%
! ACCGATTTAACTATGATTGT+AGG - chr4_3:31541469-31541488 Msa0638030:intron 30.0%
CTACCATATTCTATGGATAT+GGG - chr4_3:31541511-31541530 Msa0638030:intron 30.0%
ATTCCCATATCCATAGAATA+TGG + chr4_3:31541517-31541536 None:intergenic 30.0%
TTGTGTTCACTTACAGAAAT+AGG + chr4_3:31541548-31541567 None:intergenic 30.0%
TATCAACAAGGAATTCTTCT+TGG - chr4_3:31541663-31541682 Msa0638030:intron 30.0%
AGATAATATGATTGCTCAAG+AGG + chr4_3:31541724-31541743 None:intergenic 30.0%
AAATGGCTTTCTGATTAAAG+TGG - chr4_3:31542046-31542065 Msa0638030:intron 30.0%
! CATTTTTATGAAATTGCGAC+AGG - chr4_3:31542074-31542093 Msa0638030:intron 30.0%
ATGTCTAAACTTCATCAATC+CGG + chr4_3:31542199-31542218 None:intergenic 30.0%
!! AGGTGTTGAAATTGAAGATG+AGG + chr4_3:31538042-31538061 None:intergenic 35.0%
GAAGAAGAAGAAGAAGAAGT+GGG + chr4_3:31538105-31538124 None:intergenic 35.0%
AGAAGAAGAAGAAGAAGAAG+TGG + chr4_3:31538106-31538125 None:intergenic 35.0%
! TGGGGACAGAAATATGATTT+TGG + chr4_3:31538146-31538165 None:intergenic 35.0%
CATTGAGAGTAAAATTGGGT+CGG + chr4_3:31538188-31538207 None:intergenic 35.0%
CAGATATGACTATGAGCAAT+GGG - chr4_3:31538321-31538340 Msa0638030:intron 35.0%
CTGGCATTAAGTAAAATCTG+TGG + chr4_3:31538406-31538425 None:intergenic 35.0%
ATTTCCAGCAATGAGATTTC+TGG + chr4_3:31538425-31538444 None:intergenic 35.0%
TAAATCATACACTTGTCCTG+TGG - chr4_3:31538483-31538502 Msa0638030:intron 35.0%
AAATCATACACTTGTCCTGT+GGG - chr4_3:31538484-31538503 Msa0638030:intron 35.0%
!!! ATACTTATTTTTTGGGGCCT+AGG + chr4_3:31538703-31538722 None:intergenic 35.0%
! GGCCCCAATATTTTTCTTTT+AGG - chr4_3:31538731-31538750 Msa0638030:intron 35.0%
TTTGCAAGAAGAGATTGCAA+AGG - chr4_3:31538972-31538991 Msa0638030:intron 35.0%
CAAAGGAAAAAGAACGTTTG+AGG - chr4_3:31538989-31539008 Msa0638030:intron 35.0%
!!! AAACGGAATTTAGCTTTTCG+TGG - chr4_3:31539039-31539058 Msa0638030:intron 35.0%
! GAACTATTTGAGATCGTCAA+TGG - chr4_3:31539072-31539091 Msa0638030:intron 35.0%
TTAGTTAGGACCCAAATTGT+AGG - chr4_3:31539286-31539305 Msa0638030:intron 35.0%
TAAGGTCATGTAATCTCCAT+AGG + chr4_3:31539351-31539370 None:intergenic 35.0%
GAACTCAAAAGGTCTTCTTA+AGG + chr4_3:31539369-31539388 None:intergenic 35.0%
!!! AGGATCAGCTATTTTTTCAG+AGG + chr4_3:31539391-31539410 None:intergenic 35.0%
ATCACATGTTCTCAAACTAG+AGG + chr4_3:31539411-31539430 None:intergenic 35.0%
ATTGCTCTTATATCCTAGTG+TGG - chr4_3:31539617-31539636 Msa0638030:intron 35.0%
CAAAGTATGAAAGTAGTGAC+AGG + chr4_3:31539700-31539719 None:intergenic 35.0%
!! GTACTTTTTAGCAACTTCAG+TGG - chr4_3:31539823-31539842 Msa0638030:intron 35.0%
! TACTTTGGCTTACTAAATGC+TGG - chr4_3:31539881-31539900 Msa0638030:intron 35.0%
CATTACAATTGGGGGTTTAT+CGG - chr4_3:31539928-31539947 Msa0638030:intron 35.0%
TAAATTGGGAAATGCGAGTT+AGG + chr4_3:31540025-31540044 None:intergenic 35.0%
GCATTTCCCAATTTACAATC+TGG - chr4_3:31540030-31540049 Msa0638030:intron 35.0%
CAATCTGGATACAGATAATG+TGG - chr4_3:31540045-31540064 Msa0638030:intron 35.0%
AAGATGCTGTTAGGTAGATA+GGG + chr4_3:31540083-31540102 None:intergenic 35.0%
TATTTCTCAGAACTTAGTCC+GGG - chr4_3:31540183-31540202 Msa0638030:intron 35.0%
TGGGGTACAGTATTTGTAAT+GGG + chr4_3:31540236-31540255 None:intergenic 35.0%
ATGGGGTACAGTATTTGTAA+TGG + chr4_3:31540237-31540256 None:intergenic 35.0%
!! TTCTTCCACTGATTCACAAT+GGG + chr4_3:31540255-31540274 None:intergenic 35.0%
!! TTTCTTCCACTGATTCACAA+TGG + chr4_3:31540256-31540275 None:intergenic 35.0%
TTCACCAACTTATGCAAAAG+AGG - chr4_3:31540438-31540457 Msa0638030:CDS 35.0%
TCACCAACTTATGCAAAAGA+GGG - chr4_3:31540439-31540458 Msa0638030:CDS 35.0%
CCTAATCTAGAAACAAGACA+TGG + chr4_3:31540551-31540570 None:intergenic 35.0%
!! CCATGTCTTGTTTCTAGATT+AGG - chr4_3:31540548-31540567 Msa0638030:CDS 35.0%
!! GTCTTGTTTCTAGATTAGGT+CGG - chr4_3:31540552-31540571 Msa0638030:CDS 35.0%
ATTTACTTACAGGCAAGAAC+TGG - chr4_3:31540616-31540635 Msa0638030:CDS 35.0%
! ACTGGAAAACTTTCTGAGAA+AGG - chr4_3:31540634-31540653 Msa0638030:CDS 35.0%
! TCAGGAAATTTTCATGCGAA+TGG + chr4_3:31541092-31541111 None:intergenic 35.0%
ACAAGGATTTAACCATAACG+GGG + chr4_3:31541127-31541146 None:intergenic 35.0%
!! AGGTGTTACTCAAATTGTCA+TGG - chr4_3:31541253-31541272 Msa0638030:intron 35.0%
TGTTACTCAAATTGTCATGG+TGG - chr4_3:31541256-31541275 Msa0638030:intron 35.0%
GTTACTCAAATTGTCATGGT+GGG - chr4_3:31541257-31541276 Msa0638030:intron 35.0%
TGCAACACAGCATTTAGAAA+TGG + chr4_3:31541422-31541441 None:intergenic 35.0%
AACTATGATTGTAGGTTCAC+TGG - chr4_3:31541477-31541496 Msa0638030:intron 35.0%
GCTACCATATTCTATGGATA+TGG - chr4_3:31541510-31541529 Msa0638030:intron 35.0%
! TCCAGTTTTCATCTGCATTT+TGG - chr4_3:31541569-31541588 Msa0638030:intron 35.0%
! CCAGTTTTCATCTGCATTTT+GGG - chr4_3:31541570-31541589 Msa0638030:intron 35.0%
CATCTCTACTCTAGTTGTAT+GGG + chr4_3:31541890-31541909 None:intergenic 35.0%
ACATCTCTACTCTAGTTGTA+TGG + chr4_3:31541891-31541910 None:intergenic 35.0%
TTATGAAATTGCGACAGGAA+TGG - chr4_3:31542079-31542098 Msa0638030:intron 35.0%
!! TCTCTACGTGACTTAGTTTT+TGG - chr4_3:31542149-31542168 Msa0638030:CDS 35.0%
AAGCATGATTACTTCAGTAG+AGG + chr4_3:31542227-31542246 None:intergenic 35.0%
CAATGACTCAATTCCAAGAT+GGG + chr4_3:31542340-31542359 None:intergenic 35.0%
TCAATGACTCAATTCCAAGA+TGG + chr4_3:31542341-31542360 None:intergenic 35.0%
TCTGAATCCACGTGTATTGT+TGG - chr4_3:31537831-31537850 Msa0638030:three_prime_UTR 40.0%
CTGAATCCACGTGTATTGTT+GGG - chr4_3:31537832-31537851 Msa0638030:three_prime_UTR 40.0%
TGAATCCACGTGTATTGTTG+GGG - chr4_3:31537833-31537852 Msa0638030:three_prime_UTR 40.0%
! TATGTTGTTGTTGTTGGGGT+CGG + chr4_3:31537897-31537916 None:intergenic 40.0%
! CGTGTATGTTGTTGTTGTTG+GGG + chr4_3:31537901-31537920 None:intergenic 40.0%
! GCGTGTATGTTGTTGTTGTT+GGG + chr4_3:31537902-31537921 None:intergenic 40.0%
! TGCGTGTATGTTGTTGTTGT+TGG + chr4_3:31537903-31537922 None:intergenic 40.0%
! ATGAGGAAAAGGAGCATAAC+AGG + chr4_3:31538025-31538044 None:intergenic 40.0%
GAAGAAGTGGGATATTTGTG+TGG + chr4_3:31538093-31538112 None:intergenic 40.0%
GCAGATATGACTATGAGCAA+TGG - chr4_3:31538320-31538339 Msa0638030:intron 40.0%
GCATTTGCAGTAACAGGAAA+GGG + chr4_3:31538384-31538403 None:intergenic 40.0%
AATGCCAGAAATCTCATTGC+TGG - chr4_3:31538418-31538437 Msa0638030:intron 40.0%
AAAATGATCCTGAAACCCAC+AGG + chr4_3:31538502-31538521 None:intergenic 40.0%
TATGAGTTGTGTGTATCAGC+AGG - chr4_3:31538666-31538685 Msa0638030:CDS 40.0%
ATGAGTTGTGTGTATCAGCA+GGG - chr4_3:31538667-31538686 Msa0638030:CDS 40.0%
!! TTAGCTTTTCGTGGATCTAG+TGG - chr4_3:31539048-31539067 Msa0638030:intron 40.0%
TCGCATCTAGAAAATCTCGT+AGG - chr4_3:31539183-31539202 Msa0638030:intron 40.0%
CTAGGACGAACCTACAATTT+GGG + chr4_3:31539299-31539318 None:intergenic 40.0%
ATGTAATCTCCATAGGCACA+AGG + chr4_3:31539344-31539363 None:intergenic 40.0%
TGAGAACATGTGATGTCACA+TGG - chr4_3:31539417-31539436 Msa0638030:CDS 40.0%
TCTTGCATACCCACTTCATT+TGG - chr4_3:31539481-31539500 Msa0638030:CDS 40.0%
TTAATCAAACATGCATGGCG+TGG - chr4_3:31539593-31539612 Msa0638030:intron 40.0%
AGTGACATGATTGTCAATGC+AGG - chr4_3:31539649-31539668 Msa0638030:CDS 40.0%
GTGACATGATTGTCAATGCA+GGG - chr4_3:31539650-31539669 Msa0638030:CDS 40.0%
!! GGAATGCTTACTAGTTTGCT+TGG - chr4_3:31539671-31539690 Msa0638030:CDS 40.0%
CTTTGCCAAGAAGAGAGAAA+AGG - chr4_3:31539715-31539734 Msa0638030:intron 40.0%
! TGCTTCCTTTTCTCTCTTCT+TGG + chr4_3:31539723-31539742 None:intergenic 40.0%
GAAGAGAGAAAAGGAAGCAA+TGG - chr4_3:31539724-31539743 Msa0638030:intron 40.0%
CATTGTTCAGTTGGCATTAG+CGG - chr4_3:31539784-31539803 Msa0638030:intron 40.0%
! GTTGCTAAAAAGTACGGCAA+AGG + chr4_3:31539818-31539837 None:intergenic 40.0%
GCTTACTAAATGCTGGAATC+TGG - chr4_3:31539888-31539907 Msa0638030:intron 40.0%
GGAAATGCGAGTTAGGAAAT+CGG + chr4_3:31540018-31540037 None:intergenic 40.0%
AGATGCTGTTAGGTAGATAG+GGG + chr4_3:31540082-31540101 None:intergenic 40.0%
CAAGATGCTGTTAGGTAGAT+AGG + chr4_3:31540084-31540103 None:intergenic 40.0%
GACAGCTATGACAAAGGAAA+TGG + chr4_3:31540114-31540133 None:intergenic 40.0%
!! TCTTCCACTGATTCACAATG+GGG + chr4_3:31540254-31540273 None:intergenic 40.0%
CACCAACTTATGCAAAAGAG+GGG - chr4_3:31540440-31540459 Msa0638030:CDS 40.0%
! ATCCCCTCTTTTGCATAAGT+TGG + chr4_3:31540445-31540464 None:intergenic 40.0%
AACTTATGCAAAAGAGGGGA+TGG - chr4_3:31540444-31540463 Msa0638030:CDS 40.0%
!! TGTTTCTAGATTAGGTCGGA+TGG - chr4_3:31540556-31540575 Msa0638030:CDS 40.0%
TGGAATTGAAGCAGGGAAAT+AGG - chr4_3:31540576-31540595 Msa0638030:CDS 40.0%
! TTGTTGGTGGAATATCTGGA+TGG - chr4_3:31540665-31540684 Msa0638030:intron 40.0%
ACGTTTACCATCTGAGAAAC+AGG + chr4_3:31540718-31540737 None:intergenic 40.0%
CTCAATCCTGAGAACATGAA+AGG - chr4_3:31540847-31540866 Msa0638030:intron 40.0%
GACAATCCTTTCATGTTCTC+AGG + chr4_3:31540856-31540875 None:intergenic 40.0%
! TCTATGTTGCTTGCAATGCT+TGG - chr4_3:31540883-31540902 Msa0638030:intron 40.0%
TTGCTTGCAATGCTTGGAAA+TGG - chr4_3:31540889-31540908 Msa0638030:intron 40.0%
TCTCGAATGAATAAAGCACG+TGG + chr4_3:31540925-31540944 None:intergenic 40.0%
GACGAATTTGCAACAGTCAA+AGG + chr4_3:31541041-31541060 None:intergenic 40.0%
CAAGGATTTAACCATAACGG+GGG + chr4_3:31541126-31541145 None:intergenic 40.0%
CCCAAAATGCAGATGAAAAC+TGG + chr4_3:31541573-31541592 None:intergenic 40.0%
!! TTTCATCTGCATTTTGGGTC+TGG - chr4_3:31541575-31541594 Msa0638030:intron 40.0%
GGAATAGCAACGTGATTGGA+CGG + chr4_3:31537875-31537894 None:intergenic 45.0%
! ATGTTGTTGTTGTTGGGGTC+GGG + chr4_3:31537896-31537915 None:intergenic 45.0%
TGTGTGGTAGAAAATTGCGG+TGG + chr4_3:31538077-31538096 None:intergenic 45.0%
GTAAGAGACGGTATTGTGTG+GGG + chr4_3:31538164-31538183 None:intergenic 45.0%
CGTAAGAGACGGTATTGTGT+GGG + chr4_3:31538165-31538184 None:intergenic 45.0%
AGTGAGTGTAGGTACATACC+TGG + chr4_3:31538233-31538252 None:intergenic 45.0%
GGCATTTGCAGTAACAGGAA+AGG + chr4_3:31538385-31538404 None:intergenic 45.0%
TCTGTGGCATTTGCAGTAAC+AGG + chr4_3:31538390-31538409 None:intergenic 45.0%
! CTGCTCTTTTTGCGATTCCA+TGG - chr4_3:31538449-31538468 Msa0638030:intron 45.0%
! TCTTTTTGCGATTCCATGGC+TGG - chr4_3:31538453-31538472 Msa0638030:intron 45.0%
! TTTAAGGGAGGTGTGCTTGT+TGG - chr4_3:31538787-31538806 Msa0638030:intron 45.0%
!! GAGGTGTGCTTGTTGGTAAT+GGG - chr4_3:31538794-31538813 Msa0638030:intron 45.0%
! ATGGCACAAGACAGGTTGAA+TGG - chr4_3:31539091-31539110 Msa0638030:intron 45.0%
CCTAGGACGAACCTACAATT+TGG + chr4_3:31539300-31539319 None:intergenic 45.0%
CCAAATTGTAGGTTCGTCCT+AGG - chr4_3:31539297-31539316 Msa0638030:intron 45.0%
!!! TTCTGAGATTTTGGTGGCCT+AGG + chr4_3:31539317-31539336 None:intergenic 45.0%
GGCCACCAAAATCTCAGAAA+CGG - chr4_3:31539318-31539337 Msa0638030:intron 45.0%
!!! CAAGGCCGTTTCTGAGATTT+TGG + chr4_3:31539326-31539345 None:intergenic 45.0%
ACTTCAGTGGTTGTAGTGTC+AGG - chr4_3:31539836-31539855 Msa0638030:intron 45.0%
ACTAATACTAGGCTGGGAGA+AGG + chr4_3:31539978-31539997 None:intergenic 45.0%
ATGACAAAGGAAATGGCACC+AGG + chr4_3:31540107-31540126 None:intergenic 45.0%
TTCCTTTGTCATAGCTGTCG+TGG - chr4_3:31540115-31540134 Msa0638030:intron 45.0%
TGTACCCCATTGTGAATCAG+TGG - chr4_3:31540247-31540266 Msa0638030:CDS 45.0%
CTGCTACGTTACTCTTCATG+TGG - chr4_3:31540689-31540708 Msa0638030:intron 45.0%
GTTACTTACAACCCCCGTTA+TGG - chr4_3:31541112-31541131 Msa0638030:intron 45.0%
! ACTCAAATTGTCATGGTGGG+TGG - chr4_3:31541260-31541279 Msa0638030:intron 45.0%
!! TAGGTTCACTGGTTCATCGT+GGG - chr4_3:31541488-31541507 Msa0638030:intron 45.0%
! TCGTGGGCTACCATATTCTA+TGG - chr4_3:31541504-31541523 Msa0638030:intron 45.0%
TTCTTCTTGGCAGCAACTGT+CGG - chr4_3:31541676-31541695 Msa0638030:intron 45.0%
!! AACGCAAAGGCTAGCTTAAG+AGG + chr4_3:31541944-31541963 None:intergenic 45.0%
CTGCACATAACTCAACGCAA+AGG + chr4_3:31541957-31541976 None:intergenic 45.0%
GCATGGTTACAGTTCACCTT+TGG - chr4_3:31542124-31542143 Msa0638030:CDS 45.0%
AAGTCACGTAGAGAAGCCAA+AGG + chr4_3:31542143-31542162 None:intergenic 45.0%
ATTCCAAGATGGGAGAAGAC+TGG + chr4_3:31542330-31542349 None:intergenic 45.0%
CGTATCCCCAACAATACACG+TGG + chr4_3:31537841-31537860 None:intergenic 50.0%
ATAGCAACGTGATTGGACGG+TGG + chr4_3:31537872-31537891 None:intergenic 50.0%
GTCGGGAATAGCAACGTGAT+TGG + chr4_3:31537879-31537898 None:intergenic 50.0%
!! TGCGGTGGTGTTGTTGACTT+AGG + chr4_3:31538062-31538081 None:intergenic 50.0%
GCGTAAGAGACGGTATTGTG+TGG + chr4_3:31538166-31538185 None:intergenic 50.0%
AATTGGGTCGGCGTAAGAGA+CGG + chr4_3:31538176-31538195 None:intergenic 50.0%
TCATTCTGATCCACCTCACC+AGG - chr4_3:31538212-31538231 Msa0638030:CDS 50.0%
TAGGTACATACCTGGTGAGG+TGG + chr4_3:31538225-31538244 None:intergenic 50.0%
GTGTAGGTACATACCTGGTG+AGG + chr4_3:31538228-31538247 None:intergenic 50.0%
GAGTGTGAGTGAGTGAGTGT+AGG + chr4_3:31538244-31538263 None:intergenic 50.0%
TCACTCACTCACACTCACAC+CGG - chr4_3:31538248-31538267 Msa0638030:intron 50.0%
ACACTTGTCCTGTGGGTTTC+AGG - chr4_3:31538491-31538510 Msa0638030:intron 50.0%
! GGAGGTGTGCTTGTTGGTAA+TGG - chr4_3:31538793-31538812 Msa0638030:intron 50.0%
GATCGTCAATGGCACAAGAC+AGG - chr4_3:31539083-31539102 Msa0638030:intron 50.0%
!!! GGCCGTTTCTGAGATTTTGG+TGG + chr4_3:31539323-31539342 None:intergenic 50.0%
CACTAACGGTCTACCACACT+AGG + chr4_3:31539633-31539652 None:intergenic 50.0%
! GCAATGGTAGTGCAGACACT+TGG - chr4_3:31539740-31539759 Msa0638030:intron 50.0%
! ATGCTGGAATCTGGCGCTTT+TGG - chr4_3:31539897-31539916 Msa0638030:intron 50.0%
! TGCTGGAATCTGGCGCTTTT+GGG - chr4_3:31539898-31539917 Msa0638030:intron 50.0%
CTACCTAACAGCATCTTGCC+TGG - chr4_3:31540086-31540105 Msa0638030:intron 50.0%
AGCCACGACAGCTATGACAA+AGG + chr4_3:31540120-31540139 None:intergenic 50.0%
AGGTCGGATGGAATTGAAGC+AGG - chr4_3:31540568-31540587 Msa0638030:CDS 50.0%
GGTCGGATGGAATTGAAGCA+GGG - chr4_3:31540569-31540588 Msa0638030:CDS 50.0%
! GTGGATGCCTGTTTCTCAGA+TGG - chr4_3:31540708-31540727 Msa0638030:intron 50.0%
ACGGGGGTTGTAAGTAACTC+AGG + chr4_3:31541110-31541129 None:intergenic 50.0%
!! CAAATTGTCATGGTGGGTGG+TGG - chr4_3:31541263-31541282 Msa0638030:intron 50.0%
!! GTAGGTTCACTGGTTCATCG+TGG - chr4_3:31541487-31541506 Msa0638030:intron 50.0%
!! CAACTGTCGGTTTGGTCTCA+TGG - chr4_3:31541689-31541708 Msa0638030:intron 50.0%
!! GTCGGTTTGGTCTCATGGAT+AGG - chr4_3:31541694-31541713 Msa0638030:intron 50.0%
TTGCGACAGGAATGGCTTTC+TGG - chr4_3:31542087-31542106 Msa0638030:intron 50.0%
TGGAGAGACAGTGTAGTGCA+TGG - chr4_3:31542107-31542126 Msa0638030:intron 50.0%
GCTGCAGATGCAATACAGTG+TGG + chr4_3:31542253-31542272 None:intergenic 50.0%
CACTGTATTGCATCTGCAGC+AGG - chr4_3:31542253-31542272 Msa0638030:CDS 50.0%
ACACCAGTCTTCTCCCATCT+TGG - chr4_3:31542324-31542343 Msa0638030:CDS 50.0%
AGCAGGGCTGTATCTGTCCT+AGG - chr4_3:31538683-31538702 Msa0638030:intron 55.0%
! CAGAAACGGCCTTGTGCCTA+TGG - chr4_3:31539332-31539351 Msa0638030:intron 55.0%
GCACCAGGCAAGATGCTGTT+AGG + chr4_3:31540092-31540111 None:intergenic 55.0%
AGCTGTCGTGGCTGTTACCA+TGG - chr4_3:31540127-31540146 Msa0638030:intron 55.0%
! CTTGGCAGCAACTGTCGGTT+TGG - chr4_3:31541681-31541700 Msa0638030:intron 55.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 31537813 31542539 31537813 ID=Msa0638030;Name=Msa0638030
chr4_3 mRNA 31537813 31542539 31537813 ID=Msa0638030-mRNA-1;Parent=Msa0638030;Name=Msa0638030-mRNA-1;_AED=0.05;_eAED=0.05;_QI=196|1|1|1|1|1|9|355|401
chr4_3 exon 31537813 31538256 31537813 ID=Msa0638030-mRNA-1:exon:7410;Parent=Msa0638030-mRNA-1
chr4_3 exon 31538637 31538698 31538637 ID=Msa0638030-mRNA-1:exon:7409;Parent=Msa0638030-mRNA-1
chr4_3 exon 31538799 31538861 31538799 ID=Msa0638030-mRNA-1:exon:7408;Parent=Msa0638030-mRNA-1
chr4_3 exon 31539399 31539517 31539399 ID=Msa0638030-mRNA-1:exon:7407;Parent=Msa0638030-mRNA-1
chr4_3 exon 31539623 31539724 31539623 ID=Msa0638030-mRNA-1:exon:7406;Parent=Msa0638030-mRNA-1
chr4_3 exon 31540204 31540293 31540204 ID=Msa0638030-mRNA-1:exon:7405;Parent=Msa0638030-mRNA-1
chr4_3 exon 31540391 31540681 31540391 ID=Msa0638030-mRNA-1:exon:7404;Parent=Msa0638030-mRNA-1
chr4_3 exon 31541878 31542042 31541878 ID=Msa0638030-mRNA-1:exon:7403;Parent=Msa0638030-mRNA-1
chr4_3 exon 31542119 31542539 31542119 ID=Msa0638030-mRNA-1:exon:7402;Parent=Msa0638030-mRNA-1
chr4_3 five_prime_UTR 31542344 31542539 31542344 ID=Msa0638030-mRNA-1:five_prime_utr;Parent=Msa0638030-mRNA-1
chr4_3 CDS 31542119 31542343 31542119 ID=Msa0638030-mRNA-1:cds;Parent=Msa0638030-mRNA-1
chr4_3 CDS 31541878 31542042 31541878 ID=Msa0638030-mRNA-1:cds;Parent=Msa0638030-mRNA-1
chr4_3 CDS 31540391 31540681 31540391 ID=Msa0638030-mRNA-1:cds;Parent=Msa0638030-mRNA-1
chr4_3 CDS 31540204 31540293 31540204 ID=Msa0638030-mRNA-1:cds;Parent=Msa0638030-mRNA-1
chr4_3 CDS 31539623 31539724 31539623 ID=Msa0638030-mRNA-1:cds;Parent=Msa0638030-mRNA-1
chr4_3 CDS 31539399 31539517 31539399 ID=Msa0638030-mRNA-1:cds;Parent=Msa0638030-mRNA-1
chr4_3 CDS 31538799 31538861 31538799 ID=Msa0638030-mRNA-1:cds;Parent=Msa0638030-mRNA-1
chr4_3 CDS 31538637 31538698 31538637 ID=Msa0638030-mRNA-1:cds;Parent=Msa0638030-mRNA-1
chr4_3 CDS 31538168 31538256 31538168 ID=Msa0638030-mRNA-1:cds;Parent=Msa0638030-mRNA-1
chr4_3 three_prime_UTR 31537813 31538167 31537813 ID=Msa0638030-mRNA-1:three_prime_utr;Parent=Msa0638030-mRNA-1
Gene Sequence

>Msa0638030

ATGAAACTCATGGCCTGTTATGCTCCTTTTCCTCATCTTCAATTTCAACACCTAAGTCAACAACACCACCGCAATTTTCTACCACACAAATATCCCACTTCTTCTTCTTCTTCTTCTTCTTCTACTCGCCTTCACCAAAATCATATTTCTGTCCCCACACAATACCGTCTCTTACGCCGACCCAATTTTACTCTCAATGCTCTTCATTCTGATCCACCTCACCAGGGAAATGAAAGCAGATATGACTATGAGCAATGGGATTCACTTACATCTAAATTCTCTGGAGCAGCTAATGTCCCTTTCCTGTTACTGCAAATGCCACAGATTTTACTTAATGCCAGAAATCTCATTGCTGGAAATAATACTGCTCTTTTTGCGATTCCATGGCTGGGAATGCTTACTAGTTTGCTTGGAAACCTGTCACTACTTTCATACTTTGCCAAGAAGAGAGAAAAGGAAGCAATGGTAGTGCAGACACTTGGTGTAATTTCAACATATGTTGTCATTGTTCAGTTGGCATTAGCGGAATCTATGCCTTTGCCGTACTTTTTAGCAACTTCAGTGGTTGTAGTGTCAGGTCTTTTTCTGAATTTCATGAATTACTTTGGCTTACTAAATGCTGGAATCTGGCGCTTTTGGGAAGATTTCATTACAATTGGGGGTTTATCGGTGCTTCCTCAAATAATGTGGTCTACATTTGTCCCCTATCTACCTAACAGCATCTTGCCTGGTGCCATTTCCTTTGTCATAGCTGTCGTGGCTGTTACCATGGCAAGAACTGGAAAACTTTCTGAGAAAGGTGTTAAATTTGTTGGTGGAATATCTGGATGGACTGCTACGTTACTCTTCATGTGGATGCCTGTTTCTCAGATGTGGACAAATTTTCTCAATCCTGAGAACATGAAAGGATTGTCTGCTTTTTCTATGTTGCTTGCAATGCTTGGAAATGGACTCATGCTTCCACGTGCTTTATTCATTCGAGATTTTATGTGGTTCACTGGTTCATCGTGGGCTACCATATTCTATGGATATGGGAATCTTGCATGCCTATTTCTTTTAAACATTATCAACAAGGAATTCTTCTTGGCAGCAACTGTCGGTTTGGTCTCATGGATAGGAATGGCTTTCTGGAGAGACAGTGTAGTGCATGGTTACAGTTCACCTTTGGCTTCTCTACGTGACTTAGTTTTTGGATCTCAAATTTAA

Protein sequence

>Msa0638030

MKLMACYAPFPHLQFQHLSQQHHRNFLPHKYPTSSSSSSSSTRLHQNHISVPTQYRLLRRPNFTLNALHSDPPHQGNESRYDYEQWDSLTSKFSGAANVPFLLLQMPQILLNARNLIAGNNTALFAIPWLGMLTSLLGNLSLLSYFAKKREKEAMVVQTLGVISTYVVIVQLALAESMPLPYFLATSVVVVSGLFLNFMNYFGLLNAGIWRFWEDFITIGGLSVLPQIMWSTFVPYLPNSILPGAISFVIAVVAVTMARTGKLSEKGVKFVGGISGWTATLLFMWMPVSQMWTNFLNPENMKGLSAFSMLLAMLGNGLMLPRALFIRDFMWFTGSSWATIFYGYGNLACLFLLNIINKEFFLAATVGLVSWIGMAFWRDSVVHGYSSPLASLRDLVFGSQI*