AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0625850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625850 MtrunA17_Chr4g0001421 97.251 291 8 0 1 291 3 293 0.0 575
Msa0625850 MtrunA17_Chr2g0333871 77.816 293 58 4 1 291 3 290 1.89e-156 438
Msa0625850 MtrunA17_Chr1g0210741 62.264 212 80 0 80 291 69 280 4.00e-96 285
Msa0625850 MtrunA17_Chr7g0224571 25.373 201 117 5 85 278 15 189 6.53e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0625850 AT1G16880.1 71.970 264 72 2 28 291 29 290 8.71e-135 383
Msa0625850 AT5G04740.1 62.673 217 81 0 75 291 85 301 4.18e-100 296
Msa0625850 AT1G16880.2 66.860 172 47 4 28 195 29 194 3.68e-72 221
Msa0625850 AT5G04740.2 59.664 119 48 0 173 291 82 200 9.52e-49 161
Msa0625850 AT3G01990.4 25.871 201 117 5 85 278 30 205 1.35e-11 64.7
Msa0625850 AT3G01990.3 25.871 201 117 5 85 278 30 205 1.37e-11 64.7
Msa0625850 AT3G01990.8 25.871 201 117 5 85 278 16 191 1.39e-11 64.3
Msa0625850 AT3G01990.9 25.871 201 117 5 85 278 16 191 1.51e-11 64.7
Msa0625850 AT3G01990.2 25.871 201 117 5 85 278 30 205 1.64e-11 64.3
Msa0625850 AT3G01990.11 25.871 201 117 5 85 278 16 191 1.68e-11 64.7
Msa0625850 AT3G01990.6 25.871 201 117 5 85 278 30 205 1.74e-11 64.7
Msa0625850 AT3G01990.7 25.871 201 117 5 85 278 30 205 1.83e-11 64.7
Msa0625850 AT3G01990.5 25.871 201 117 5 85 278 30 205 1.83e-11 64.7
Msa0625850 AT3G01990.10 25.871 201 117 5 85 278 16 191 1.99e-11 64.7
Msa0625850 AT3G01990.1 25.871 201 117 5 85 278 16 191 1.99e-11 64.7

Find 82 sgRNAs with CRISPR-Local

Find 300 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATAAAATACTGTATTTA+TGG 0.151469 4_3:-5190699 Msa0625850:three_prime_UTR
CTTTAAATGCTGCTGATATT+TGG 0.198365 4_3:-5190775 Msa0625850:three_prime_UTR
TGATAATAGTTTGAGAGTTT+TGG 0.215649 4_3:-5195486 Msa0625850:CDS
AGATTCATCACCTGCTCTTT+TGG 0.222017 4_3:+5192690 None:intergenic
TCTTGGTCAATTATGACTAT+TGG 0.255614 4_3:+5193951 None:intergenic
TTTGTCAGGTTGTTATCTTC+TGG 0.262379 4_3:-5194198 Msa0625850:intron
ATGTCAAATTTGTAAGAATT+AGG 0.273115 4_3:+5195641 None:intergenic
AATCATAAAACTGAATTAAC+AGG 0.273586 4_3:-5190852 Msa0625850:three_prime_UTR
TTAGCAATGGGAGCAGCTTT+TGG 0.275092 4_3:-5192723 Msa0625850:CDS
CTTGGTCAATTATGACTATT+GGG 0.278108 4_3:+5193952 None:intergenic
ATTGACATTGCTGTTGAATC+TGG 0.326851 4_3:-5192062 Msa0625850:CDS
GTTTGCATTCATTGTTTCAT+TGG 0.328185 4_3:-5190908 Msa0625850:three_prime_UTR
GAGGAGAAATGAAGAATAAC+TGG 0.343325 4_3:-5190885 Msa0625850:three_prime_UTR
AAAGAGATGCCCTTCAAAAC+TGG 0.347836 4_3:+5190998 None:intergenic
TTTGCATTCATTGTTTCATT+GGG 0.396621 4_3:-5190907 Msa0625850:three_prime_UTR
TGTTTGAACCTAGGGGCTCT+TGG 0.406397 4_3:-5191559 Msa0625850:intron
AAACTGGATTCCTCAGTTGC+CGG 0.412489 4_3:+5191014 None:intergenic
ATCTCCACCACAGTTGCATC+TGG 0.413372 4_3:+5193921 None:intergenic
CTTAGGCCTCAATGTTGTTA+AGG 0.415434 4_3:-5193760 Msa0625850:CDS
GTTACTTTCTTCACAAAAGA+AGG 0.417045 4_3:-5195400 Msa0625850:intron
GCTATGAGTGCTTTGAGACT+TGG 0.418351 4_3:-5195530 Msa0625850:CDS
AGTACCTGCACATCAGTAAC+AGG 0.435514 4_3:+5194147 None:intergenic
GAGGGCATGAATGAAAGTTT+TGG 0.442821 4_3:-5190675 Msa0625850:three_prime_UTR
GGAAGATCCAGAGTTGTTAG+AGG 0.470609 4_3:-5192918 Msa0625850:CDS
AGATTAAAGTTACCTGCTGC+AGG 0.475170 4_3:+5191487 None:intergenic
TGGAGATAACTTTCGGTGAT+CGG 0.475265 4_3:-5193905 Msa0625850:CDS
CGAATTGCCTCTAACAACTC+TGG 0.479030 4_3:+5192911 None:intergenic
GCTTCATTAACTCTAGGACT+TGG 0.480271 4_3:+5190627 None:intergenic
CGAATGCATTACCTTCGATC+TGG 0.482009 4_3:+5192302 None:intergenic
AATCAGCAAGCCCCTGCAGC+AGG 0.483771 4_3:-5191499 Msa0625850:intron
CTCTCTGCTTCATTAACTCT+AGG 0.486414 4_3:+5190621 None:intergenic
GTGGAGACAGCTGATCGGCC+TGG 0.489025 4_3:-5192119 Msa0625850:CDS
AATAAAGTAAAATAAGAGAC+AGG 0.493335 4_3:+5195760 None:intergenic
TTCATATGAATGAAACAAAA+CGG 0.504007 4_3:+5195676 None:intergenic
ATAACTTTCGGTGATCGGCT+TGG 0.510246 4_3:-5193900 Msa0625850:CDS
TCAAGTTCTCAGTTAGCAAT+GGG 0.515912 4_3:-5192735 Msa0625850:CDS
CAGTGATACTGGCCGAAAAG+TGG 0.519005 4_3:-5192939 Msa0625850:CDS
GGATATCAGGGTGGAAATCA+AGG 0.522473 4_3:-5193996 Msa0625850:intron
GAGATATTTCTTGAGGCGTC+CGG 0.523812 4_3:-5191033 Msa0625850:CDS
AAGTTTCATGTTAGCTACAA+AGG 0.527152 4_3:-5191528 Msa0625850:CDS
CACATAAACATATCCGATGA+TGG 0.529758 4_3:-5192326 Msa0625850:CDS
GCATTCATTGTTTCATTGGG+AGG 0.530901 4_3:-5190904 Msa0625850:three_prime_UTR
AGCACCTGTTACTGATGTGC+AGG 0.531571 4_3:-5194151 Msa0625850:intron
TTGCATCTGGATCCAAGTCT+TGG 0.535486 4_3:+5193934 None:intergenic
GAATCTCAGTTATTGAAAAG+TGG 0.538330 4_3:+5190649 None:intergenic
AAAATACTGTATTTATGGTG+AGG 0.545823 4_3:-5190694 Msa0625850:three_prime_UTR
CCTTCGATCTGGACCATCAT+CGG 0.546047 4_3:+5192313 None:intergenic
ATCAAGTTCTCAGTTAGCAA+TGG 0.546569 4_3:-5192736 Msa0625850:CDS
AAATACTGTATTTATGGTGA+GGG 0.549877 4_3:-5190693 Msa0625850:three_prime_UTR
ATTTGTAAGAATTAGGAAAG+TGG 0.551335 4_3:+5195648 None:intergenic
TTGTTTCATTCATATGAATG+TGG 0.556654 4_3:-5195671 Msa0625850:five_prime_UTR
ATTAAAGTTACCTGCTGCAG+GGG 0.562709 4_3:+5191489 None:intergenic
ACAAGATCGACAAGTAATCC+AGG 0.566828 4_3:+5192101 None:intergenic
CATTTGCCTTAACAACATTG+AGG 0.567718 4_3:+5193754 None:intergenic
AGTCATAATTGACCAAGACT+TGG 0.567923 4_3:-5193946 Msa0625850:CDS
GTAACAGGTGCTGCCGCTCG+AGG 0.568447 4_3:+5194162 None:intergenic
CAAGAAATATCTCAAGCTGT+TGG 0.569442 4_3:+5191043 None:intergenic
AGTATAACACCACCATGGAT+TGG 0.571048 4_3:-5190936 Msa0625850:three_prime_UTR
CTTGAGGCGTCCGGCAACTG+AGG 0.581879 4_3:-5191024 Msa0625850:CDS
TAACAGGTGCTGCCGCTCGA+GGG 0.586405 4_3:+5194163 None:intergenic
AATTGTCATTCAGGTTGATG+TGG 0.589579 4_3:-5192360 Msa0625850:intron
GATTAAAGTTACCTGCTGCA+GGG 0.589784 4_3:+5191488 None:intergenic
ACTTCTACCTCCAAAAGAGC+AGG 0.595122 4_3:-5192700 Msa0625850:intron
CCGATGATGGTCCAGATCGA+AGG 0.598336 4_3:-5192313 Msa0625850:intron
TGCAAACATTCACCAATCCA+TGG 0.598744 4_3:+5190924 None:intergenic
AGTAAAATAAGAGACAGGAA+TGG 0.599760 4_3:+5195765 None:intergenic
ACAGCTTGAGATATTTCTTG+AGG 0.602665 4_3:-5191040 Msa0625850:CDS
TCAATTATGACTATTGGGGT+CGG 0.614778 4_3:+5193957 None:intergenic
TATGACTATTGGGGTCGGAA+CGG 0.615998 4_3:+5193962 None:intergenic
ACTGTGGTGGAGATAACTTT+CGG 0.631847 4_3:-5193912 Msa0625850:CDS
TCTATGTGGAGACAGCTGAT+CGG 0.632715 4_3:-5192124 Msa0625850:CDS
ATCATAAAACTGAATTAACA+GGG 0.638526 4_3:-5190851 Msa0625850:three_prime_UTR
TTGGTCAATTATGACTATTG+GGG 0.653500 4_3:+5193953 None:intergenic
TTTGGAGTATAACACCACCA+TGG 0.661005 4_3:-5190941 Msa0625850:three_prime_UTR
CTTGGATCCAGATGCAACTG+TGG 0.661276 4_3:-5193928 Msa0625850:CDS
AACTACTATTATCCCTCGAG+CGG 0.661528 4_3:-5194175 Msa0625850:CDS
ATGAGTGCATTAAAAGACTT+AGG 0.662772 4_3:-5193777 Msa0625850:CDS
TCTCAGTTATTGAAAAGTGG+TGG 0.663175 4_3:+5190652 None:intergenic
TAATCTGATTCAGTATCACC+CGG 0.667172 4_3:-5192873 Msa0625850:intron
GGATCCAGATGCAACTGTGG+TGG 0.679796 4_3:-5193925 Msa0625850:CDS
ATCTGGAGAATTTGACACTG+AGG 0.685475 4_3:-5192045 Msa0625850:intron
AAACATTCACCAATCCATGG+TGG 0.770447 4_3:+5190927 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATCTGAATTAAAAAAAAA+GGG + chr4_3:5191957-5191976 None:intergenic 10.0%
!! AAAATAAAATACTGTATTTA+TGG - chr4_3:5195718-5195737 Msa0625850:five_prime_UTR 10.0%
!!! TCATTTTGAACTAAAAAAAA+AGG - chr4_3:5190859-5190878 Msa0625850:three_prime_UTR 15.0%
!! ACAAATATATATTCAAAAGT+GGG + chr4_3:5191773-5191792 None:intergenic 15.0%
!! AACAAATATATATTCAAAAG+TGG + chr4_3:5191774-5191793 None:intergenic 15.0%
!! ATTTGTTTATAAAATTGTAG+TGG - chr4_3:5191787-5191806 Msa0625850:intron 15.0%
!! TTATTCTGTTTATTTAGATT+TGG - chr4_3:5191876-5191895 Msa0625850:intron 15.0%
!! CAAATCTGAATTAAAAAAAA+AGG + chr4_3:5191958-5191977 None:intergenic 15.0%
!!! TTATTTTTGTTTCTTTTATG+TGG - chr4_3:5192400-5192419 Msa0625850:intron 15.0%
!!! TAAGCTATTTCTATAATAAA+AGG - chr4_3:5193059-5193078 Msa0625850:intron 15.0%
!!! TTCTGTAATGTATATTTTAT+TGG + chr4_3:5193875-5193894 None:intergenic 15.0%
!!! ATCTTGATTTTTTATCATTT+AGG + chr4_3:5195218-5195237 None:intergenic 15.0%
!! AATAAAGTAAAATAAGAGAC+AGG + chr4_3:5190660-5190679 None:intergenic 20.0%
!! TTCATATGAATGAAACAAAA+CGG + chr4_3:5190744-5190763 None:intergenic 20.0%
!! ATGTCAAATTTGTAAGAATT+AGG + chr4_3:5190779-5190798 None:intergenic 20.0%
!! TCATAAATCATATCTATGAA+TGG + chr4_3:5191248-5191267 None:intergenic 20.0%
!!! ATCGGCTTATAATTTTTTTA+TGG + chr4_3:5191426-5191445 None:intergenic 20.0%
!! ACTAATTAAGTTAGTAGATT+AGG - chr4_3:5192043-5192062 Msa0625850:intron 20.0%
!!! AATAGTAAACATTTGAAACT+TGG - chr4_3:5192113-5192132 Msa0625850:CDS 20.0%
!!! ATAGTAAACATTTGAAACTT+GGG - chr4_3:5192114-5192133 Msa0625850:CDS 20.0%
!!! AAAACAATGTGACTTTTTTT+TGG + chr4_3:5193107-5193126 None:intergenic 20.0%
!! TTGAATTTCTAATACTGTTT+AGG + chr4_3:5193334-5193353 None:intergenic 20.0%
!! TTCTGTAAATTGAAAAGATA+AGG - chr4_3:5193812-5193831 Msa0625850:intron 20.0%
!! TCTGTAAATTGAAAAGATAA+GGG - chr4_3:5193813-5193832 Msa0625850:intron 20.0%
!! TGTTAAAGTCATGATATATA+AGG - chr4_3:5194190-5194209 Msa0625850:CDS 20.0%
!! ATATGTTTGGTAAATTGTAA+TGG + chr4_3:5195195-5195214 None:intergenic 20.0%
!!! TTTATCATTTAGGATATGTT+TGG + chr4_3:5195208-5195227 None:intergenic 20.0%
!!! CATGACATTATATTTTCTTT+TGG - chr4_3:5195458-5195477 Msa0625850:CDS 20.0%
!! AATCATAAAACTGAATTAAC+AGG - chr4_3:5195565-5195584 Msa0625850:five_prime_UTR 20.0%
!! ATCATAAAACTGAATTAACA+GGG - chr4_3:5195566-5195585 Msa0625850:five_prime_UTR 20.0%
! TTGTTTCATTCATATGAATG+TGG - chr4_3:5190746-5190765 Msa0625850:three_prime_UTR 25.0%
! ATTTGTAAGAATTAGGAAAG+TGG + chr4_3:5190772-5190791 None:intergenic 25.0%
!!! AAGTTAGGATTTTGAGAAAT+GGG + chr4_3:5190815-5190834 None:intergenic 25.0%
!!! AAAGTTAGGATTTTGAGAAA+TGG + chr4_3:5190816-5190835 None:intergenic 25.0%
! TGAACTAAAAAAAAAGGCTA+TGG - chr4_3:5190865-5190884 Msa0625850:three_prime_UTR 25.0%
!! TGATAATAGTTTGAGAGTTT+TGG - chr4_3:5190931-5190950 Msa0625850:three_prime_UTR 25.0%
!! TTAGAATTTGAGCTTTTAGT+AGG - chr4_3:5191139-5191158 Msa0625850:intron 25.0%
! GATTCACAATTCACAAAAAT+AGG + chr4_3:5191336-5191355 None:intergenic 25.0%
! TTAAATCTTGAATTACTTCG+AGG + chr4_3:5191463-5191482 None:intergenic 25.0%
!!! ATGTATACTGATTCATTGTA+AGG + chr4_3:5191575-5191594 None:intergenic 25.0%
! TATTCAAAAGTGGGTATAAT+TGG + chr4_3:5191764-5191783 None:intergenic 25.0%
! TTCTTCATGAAAATAAGACA+AGG + chr4_3:5191997-5192016 None:intergenic 25.0%
! ATTAAGTTAGTAGATTAGGT+TGG - chr4_3:5192047-5192066 Msa0625850:CDS 25.0%
! TACAATTAACACACAGAAAT+GGG + chr4_3:5192180-5192199 None:intergenic 25.0%
! ATACAATTAACACACAGAAA+TGG + chr4_3:5192181-5192200 None:intergenic 25.0%
!! TTTCTTTTATGTGGATATCA+GGG - chr4_3:5192409-5192428 Msa0625850:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr4_3:5193009-5193028 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr4_3:5193010-5193029 None:intergenic 25.0%
! TCAAATAAGTCAATCCAAAT+AGG - chr4_3:5193235-5193254 Msa0625850:intron 25.0%
! ATTTCTAATACTGTTTAGGT+AGG + chr4_3:5193330-5193349 None:intergenic 25.0%
!! CAAGATATTTGTTGCTTAAA+AGG + chr4_3:5193400-5193419 None:intergenic 25.0%
!! CTTTTAAGCAACAAATATCT+TGG - chr4_3:5193398-5193417 Msa0625850:intron 25.0%
!! AATTTTCAAATCGATGATTC+AGG - chr4_3:5193657-5193676 Msa0625850:intron 25.0%
! TTATTGGTGAAAAATGAAAC+AGG + chr4_3:5193859-5193878 None:intergenic 25.0%
! ATACATTACAGAAGACATTA+TGG - chr4_3:5193882-5193901 Msa0625850:intron 25.0%
! TTCTTTCTATTTGTGATAGA+GGG + chr4_3:5194025-5194044 None:intergenic 25.0%
! TTTCTTTCTATTTGTGATAG+AGG + chr4_3:5194026-5194045 None:intergenic 25.0%
! ATACTCATGCTTTCTAATTT+CGG - chr4_3:5194223-5194242 Msa0625850:intron 25.0%
!!! ATTTTGTAGTTTGTTCTATG+TGG - chr4_3:5194279-5194298 Msa0625850:intron 25.0%
!!! GATACATTCATTTTGAGTAA+TGG + chr4_3:5194464-5194483 None:intergenic 25.0%
! TCCTACTATTCAATGAATTA+GGG + chr4_3:5194713-5194732 None:intergenic 25.0%
! TTCCTACTATTCAATGAATT+AGG + chr4_3:5194714-5194733 None:intergenic 25.0%
! GATTGTTAGAATAGAAAATC+TGG + chr4_3:5194775-5194794 None:intergenic 25.0%
! TTGAGCTTCAAAAAAAAAGA+AGG - chr4_3:5194805-5194824 Msa0625850:intron 25.0%
! TGAGCTTCAAAAAAAAAGAA+GGG - chr4_3:5194806-5194825 Msa0625850:intron 25.0%
! ATGATTAAAGTAGATTTGTC+TGG - chr4_3:5195056-5195075 Msa0625850:intron 25.0%
! CTATAAACTATACGCTATAA+GGG + chr4_3:5195149-5195168 None:intergenic 25.0%
! TTTGCATTCATTGTTTCATT+GGG - chr4_3:5195510-5195529 Msa0625850:CDS 25.0%
! AAAATACTGTATTTATGGTG+AGG - chr4_3:5195723-5195742 Msa0625850:five_prime_UTR 25.0%
! AAATACTGTATTTATGGTGA+GGG - chr4_3:5195724-5195743 Msa0625850:five_prime_UTR 25.0%
AGTAAAATAAGAGACAGGAA+TGG + chr4_3:5190655-5190674 None:intergenic 30.0%
!!! AAACGGTTGTTTCTGTTTTT+TGG + chr4_3:5190727-5190746 None:intergenic 30.0%
CAGAGAAAAGAGAAAAAGTT+AGG + chr4_3:5190830-5190849 None:intergenic 30.0%
AAAAAAGGGACACAGAAAAT+GGG + chr4_3:5190962-5190981 None:intergenic 30.0%
!! CAGAAGAAGCATTCAAAAAA+GGG + chr4_3:5190976-5190995 None:intergenic 30.0%
! CTTTTGTGAAGAAAGTAACA+TGG + chr4_3:5191016-5191035 None:intergenic 30.0%
! GTTACTTTCTTCACAAAAGA+AGG - chr4_3:5191017-5191036 Msa0625850:CDS 30.0%
! GCTTTGATCATTGGTTATTA+TGG - chr4_3:5191047-5191066 Msa0625850:CDS 30.0%
! GAGGTGTATTTTCGATATAT+CGG + chr4_3:5191444-5191463 None:intergenic 30.0%
ACAAAGTTGACAAAAACAAG+TGG - chr4_3:5191521-5191540 Msa0625850:CDS 30.0%
TATAGACTAACCTTAGGTAA+TGG - chr4_3:5191547-5191566 Msa0625850:CDS 30.0%
AGTATACATCATAGTGAATC+AGG - chr4_3:5191586-5191605 Msa0625850:intron 30.0%
!! GGAACTCATTGACTTATATT+TGG - chr4_3:5191808-5191827 Msa0625850:intron 30.0%
TGCATTGCATATGTTAATTC+TGG - chr4_3:5191845-5191864 Msa0625850:intron 30.0%
!! TAGATTAGGTTGGATAAGTA+CGG - chr4_3:5192057-5192076 Msa0625850:CDS 30.0%
! TTACTGCTCTTTCTTTTGTA+TGG - chr4_3:5192087-5192106 Msa0625850:CDS 30.0%
AAGATAACAACCTGACAAAA+GGG + chr4_3:5192218-5192237 None:intergenic 30.0%
GCATTATAGAGATGAACTAT+GGG + chr4_3:5192348-5192367 None:intergenic 30.0%
AGCATTATAGAGATGAACTA+TGG + chr4_3:5192349-5192368 None:intergenic 30.0%
! TTTTTACCGATCAACAAACA+CGG + chr4_3:5192378-5192397 None:intergenic 30.0%
! GTTTCTTTTATGTGGATATC+AGG - chr4_3:5192408-5192427 Msa0625850:intron 30.0%
TTGGTCAATTATGACTATTG+GGG + chr4_3:5192467-5192486 None:intergenic 30.0%
CTTGGTCAATTATGACTATT+GGG + chr4_3:5192468-5192487 None:intergenic 30.0%
TCTTGGTCAATTATGACTAT+TGG + chr4_3:5192469-5192488 None:intergenic 30.0%
!! TATCTGTAGCTTTTTCTTAG+AGG - chr4_3:5192595-5192614 Msa0625850:intron 30.0%
!! ATCTGTAGCTTTTTCTTAGA+GGG - chr4_3:5192596-5192615 Msa0625850:intron 30.0%
ATGAGTGCATTAAAAGACTT+AGG - chr4_3:5192640-5192659 Msa0625850:intron 30.0%
! TGTTAAGGCAAATGTTTTTC+TGG - chr4_3:5192672-5192691 Msa0625850:intron 30.0%
! AATGTTTTTCTGGATTCTTC+TGG - chr4_3:5192682-5192701 Msa0625850:intron 30.0%
! TAATACTTACGCTTTTGTGA+TGG + chr4_3:5192725-5192744 None:intergenic 30.0%
AATATCTGAGAGTTTCAGTT+GGG + chr4_3:5192903-5192922 None:intergenic 30.0%
!! TATTTTATTTACTCCACCAC+TGG - chr4_3:5192926-5192945 Msa0625850:CDS 30.0%
TGATGAATCTCTTTACTTCT+CGG - chr4_3:5193740-5193759 Msa0625850:CDS 30.0%
! TGTGAATTTTTCATTCTCTC+TGG - chr4_3:5193777-5193796 Msa0625850:CDS 30.0%
TTCATTACCAATTGTCATTC+AGG - chr4_3:5194048-5194067 Msa0625850:intron 30.0%
GAATGTATCAATGTTGAGTA+TGG - chr4_3:5194475-5194494 Msa0625850:intron 30.0%
ACCCTAATTCATTGAATAGT+AGG - chr4_3:5194709-5194728 Msa0625850:intron 30.0%
GAGCTTCAAAAAAAAAGAAG+GGG - chr4_3:5194807-5194826 Msa0625850:intron 30.0%
!!! ACAAAGCTTTTTCATCAGAT+TGG + chr4_3:5194841-5194860 None:intergenic 30.0%
!! AAAAAGCTTTGTTTGAACCT+AGG - chr4_3:5194849-5194868 Msa0625850:intron 30.0%
!! AAAAGCTTTGTTTGAACCTA+GGG - chr4_3:5194850-5194869 Msa0625850:intron 30.0%
AAGTTTCATGTTAGCTACAA+AGG - chr4_3:5194889-5194908 Msa0625850:intron 30.0%
TGTTATTCGTTGTAAGCTAA+TGG + chr4_3:5195018-5195037 None:intergenic 30.0%
AAGTAGATTTGTCTGGTAAA+CGG - chr4_3:5195063-5195082 Msa0625850:intron 30.0%
GCTATAAACTATACGCTATA+AGG + chr4_3:5195150-5195169 None:intergenic 30.0%
AACTCATAGTACATTGAAGT+AGG - chr4_3:5195246-5195265 Msa0625850:intron 30.0%
GTTTGCATTCATTGTTTCAT+TGG - chr4_3:5195509-5195528 Msa0625850:CDS 30.0%
CTTTAAATGCTGCTGATATT+TGG - chr4_3:5195642-5195661 Msa0625850:five_prime_UTR 30.0%
GAATCTCAGTTATTGAAAAG+TGG + chr4_3:5195771-5195790 None:intergenic 30.0%
CAAAAAAGGGACACAGAAAA+TGG + chr4_3:5190963-5190982 None:intergenic 35.0%
!! CCAGAAGAAGCATTCAAAAA+AGG + chr4_3:5190977-5190996 None:intergenic 35.0%
!!! CCTTTTTTGAATGCTTCTTC+TGG - chr4_3:5190974-5190993 Msa0625850:three_prime_UTR 35.0%
!! GGTAAACTAGCTTTGATCAT+TGG - chr4_3:5191038-5191057 Msa0625850:CDS 35.0%
! GAATTTGAGCTTTTAGTAGG+TGG - chr4_3:5191142-5191161 Msa0625850:intron 35.0%
TCAAACGTCGTCATAATACT+CGG + chr4_3:5191271-5191290 None:intergenic 35.0%
TGGATGTATAGACTAACCTT+AGG - chr4_3:5191541-5191560 Msa0625850:CDS 35.0%
TTGTAAGGAACCATTACCTA+AGG + chr4_3:5191560-5191579 None:intergenic 35.0%
! GCACTAGGAATTGTATTGAT+TGG - chr4_3:5191642-5191661 Msa0625850:intron 35.0%
AACATATGCAATGCAAGCAA+AGG + chr4_3:5191840-5191859 None:intergenic 35.0%
ATTAAAAAAAAAGGGCAGCC+CGG + chr4_3:5191949-5191968 None:intergenic 35.0%
CAGAAATGGGCATATTACTT+TGG + chr4_3:5192167-5192186 None:intergenic 35.0%
! TATGTATGTACCCTTTTGTC+AGG - chr4_3:5192205-5192224 Msa0625850:intron 35.0%
GAAGATAACAACCTGACAAA+AGG + chr4_3:5192219-5192238 None:intergenic 35.0%
! TTTGTCAGGTTGTTATCTTC+TGG - chr4_3:5192219-5192238 Msa0625850:intron 35.0%
GCAAATAACGACAATCACAT+AGG + chr4_3:5192308-5192327 None:intergenic 35.0%
TCAATTATGACTATTGGGGT+CGG + chr4_3:5192463-5192482 None:intergenic 35.0%
AGTCATAATTGACCAAGACT+TGG - chr4_3:5192471-5192490 Msa0625850:intron 35.0%
CATTTGCCTTAACAACATTG+AGG + chr4_3:5192666-5192685 None:intergenic 35.0%
GAATATCTGAGAGTTTCAGT+TGG + chr4_3:5192904-5192923 None:intergenic 35.0%
TTAGAGTAGATGGTGCAATT+AGG + chr4_3:5192982-5193001 None:intergenic 35.0%
TATCTATAAGTTCTCCACGA+TGG + chr4_3:5193151-5193170 None:intergenic 35.0%
! TGTTTAGCTCGCATAAAGAA+AGG + chr4_3:5193261-5193280 None:intergenic 35.0%
AGCAACAAATATCTTGGATG+AGG - chr4_3:5193404-5193423 Msa0625850:intron 35.0%
TCGCTTCTTTAGTAATTCCT+TGG - chr4_3:5193434-5193453 Msa0625850:intron 35.0%
CGCTTCTTTAGTAATTCCTT+GGG - chr4_3:5193435-5193454 Msa0625850:intron 35.0%
TAATCTGATTCAGTATCACC+CGG - chr4_3:5193544-5193563 Msa0625850:intron 35.0%
TGGTTGTAATATATGCCAAC+AGG - chr4_3:5193609-5193628 Msa0625850:intron 35.0%
ATCAAGTTCTCAGTTAGCAA+TGG - chr4_3:5193681-5193700 Msa0625850:intron 35.0%
TCAAGTTCTCAGTTAGCAAT+GGG - chr4_3:5193682-5193701 Msa0625850:intron 35.0%
TTTCTATTTGTGATAGAGGG+AGG + chr4_3:5194022-5194041 None:intergenic 35.0%
ACATCAACCTGAATGACAAT+TGG + chr4_3:5194058-5194077 None:intergenic 35.0%
!! AATTGTCATTCAGGTTGATG+TGG - chr4_3:5194057-5194076 Msa0625850:intron 35.0%
CACATAAACATATCCGATGA+TGG - chr4_3:5194091-5194110 Msa0625850:intron 35.0%
! ATTGACATTGCTGTTGAATC+TGG - chr4_3:5194355-5194374 Msa0625850:intron 35.0%
TTTGTTGGGTTACAACTATG+AGG - chr4_3:5194583-5194602 Msa0625850:intron 35.0%
TTGTTGGGTTACAACTATGA+GGG - chr4_3:5194584-5194603 Msa0625850:intron 35.0%
!! AAAGCTTTGTTTGAACCTAG+GGG - chr4_3:5194851-5194870 Msa0625850:intron 35.0%
CTTTAATCGTCAAGTACTCT+TGG - chr4_3:5194982-5195001 Msa0625850:intron 35.0%
ATTTGTCTGGTAAACGGTAA+TGG - chr4_3:5195069-5195088 Msa0625850:intron 35.0%
CTTCATATTTACCATGTTGC+AGG - chr4_3:5195345-5195364 Msa0625850:intron 35.0%
CAAGAAATATCTCAAGCTGT+TGG + chr4_3:5195377-5195396 None:intergenic 35.0%
ACAGCTTGAGATATTTCTTG+AGG - chr4_3:5195377-5195396 Msa0625850:intron 35.0%
GAGGAGAAATGAAGAATAAC+TGG - chr4_3:5195532-5195551 Msa0625850:CDS 35.0%
TCTCAGTTATTGAAAAGTGG+TGG + chr4_3:5195768-5195787 None:intergenic 35.0%
! GAGCTTTTAGTAGGTGGTTA+TGG - chr4_3:5191148-5191167 Msa0625850:intron 40.0%
GTGCAAAATTGATACGCACT+AGG - chr4_3:5191627-5191646 Msa0625850:intron 40.0%
CTCATATGTACCGAAGATAC+TGG - chr4_3:5191670-5191689 Msa0625850:intron 40.0%
GGCATAGTTACCAGTATCTT+CGG + chr4_3:5191683-5191702 None:intergenic 40.0%
AAGTCATATACCACTGAGTG+GGG + chr4_3:5191723-5191742 None:intergenic 40.0%
CAAGTCATATACCACTGAGT+GGG + chr4_3:5191724-5191743 None:intergenic 40.0%
ACAAGTCATATACCACTGAG+TGG + chr4_3:5191725-5191744 None:intergenic 40.0%
TATGCAATGCAAGCAAAGGA+AGG + chr4_3:5191836-5191855 None:intergenic 40.0%
AACTACTATTATCCCTCGAG+CGG - chr4_3:5192242-5192261 Msa0625850:intron 40.0%
TAGAGATGAACTATGGGTCT+TGG + chr4_3:5192342-5192361 None:intergenic 40.0%
! CTTTTATGTGGATATCAGGG+TGG - chr4_3:5192412-5192431 Msa0625850:intron 40.0%
! ACTGTGGTGGAGATAACTTT+CGG - chr4_3:5192505-5192524 Msa0625850:intron 40.0%
TGGAGATAACTTTCGGTGAT+CGG - chr4_3:5192512-5192531 Msa0625850:intron 40.0%
CTTAGGCCTCAATGTTGTTA+AGG - chr4_3:5192657-5192676 Msa0625850:intron 40.0%
ACCGAGTATCTCTTCAGTTT+AGG - chr4_3:5192865-5192884 Msa0625850:intron 40.0%
GCCTAAACTGAAGAGATACT+CGG + chr4_3:5192869-5192888 None:intergenic 40.0%
!!! ACAGGGCTTTTTAGAGTAGA+TGG + chr4_3:5192992-5193011 None:intergenic 40.0%
! CTACTCTAAAAAGCCCTGTT+TGG - chr4_3:5192993-5193012 Msa0625850:intron 40.0%
AGTCTGTTTCAGAGAGCTAA+TGG + chr4_3:5193189-5193208 None:intergenic 40.0%
CGCATAAAGAAAGGCCTATT+TGG + chr4_3:5193252-5193271 None:intergenic 40.0%
!! TGAAACTTGTTGCGCAACTT+AGG - chr4_3:5193364-5193383 Msa0625850:intron 40.0%
TAGTAATTCCTTGGGTATGC+TGG - chr4_3:5193443-5193462 Msa0625850:intron 40.0%
!! ACTCTGGATCTTCCACTTTT+CGG + chr4_3:5193493-5193512 None:intergenic 40.0%
!! GATAGTTGGTAAAGCATACC+GGG + chr4_3:5193565-5193584 None:intergenic 40.0%
!! GGATAGTTGGTAAAGCATAC+CGG + chr4_3:5193566-5193585 None:intergenic 40.0%
CAATGAGAAAGGAGGATAGT+TGG + chr4_3:5193579-5193598 None:intergenic 40.0%
CAACTATCCTCCTTTCTCAT+TGG - chr4_3:5193577-5193596 Msa0625850:intron 40.0%
TATCCTCCTTTCTCATTGGA+GGG - chr4_3:5193581-5193600 Msa0625850:intron 40.0%
AAATCACCCTCCAATGAGAA+AGG + chr4_3:5193590-5193609 None:intergenic 40.0%
TTTCTCATTGGAGGGTGATT+TGG - chr4_3:5193589-5193608 Msa0625850:intron 40.0%
! AGATTCATCACCTGCTCTTT+TGG + chr4_3:5193730-5193749 None:intergenic 40.0%
ACAAGATCGACAAGTAATCC+AGG + chr4_3:5194319-5194338 None:intergenic 40.0%
ATCTGGAGAATTTGACACTG+AGG - chr4_3:5194372-5194391 Msa0625850:intron 40.0%
GCTCATAATCGCTGATAAGA+GGG - chr4_3:5194497-5194516 Msa0625850:intron 40.0%
GCGTGGCTTATTCATTTGTT+GGG - chr4_3:5194569-5194588 Msa0625850:intron 40.0%
TTACGGATAAGCTTGTGAAC+TGG - chr4_3:5194644-5194663 Msa0625850:intron 40.0%
ATTAAAGTTACCTGCTGCAG+GGG + chr4_3:5194931-5194950 None:intergenic 40.0%
GATTAAAGTTACCTGCTGCA+GGG + chr4_3:5194932-5194951 None:intergenic 40.0%
AGATTAAAGTTACCTGCTGC+AGG + chr4_3:5194933-5194952 None:intergenic 40.0%
!! ACTGAGGAATCCAGTTTTGA+AGG - chr4_3:5195409-5195428 Msa0625850:CDS 40.0%
!!! CTGAGGAATCCAGTTTTGAA+GGG - chr4_3:5195410-5195429 Msa0625850:CDS 40.0%
AAAGAGATGCCCTTCAAAAC+TGG + chr4_3:5195422-5195441 None:intergenic 40.0%
! TTTGGAGTATAACACCACCA+TGG - chr4_3:5195476-5195495 Msa0625850:CDS 40.0%
AGTATAACACCACCATGGAT+TGG - chr4_3:5195481-5195500 Msa0625850:CDS 40.0%
AAACATTCACCAATCCATGG+TGG + chr4_3:5195493-5195512 None:intergenic 40.0%
TGCAAACATTCACCAATCCA+TGG + chr4_3:5195496-5195515 None:intergenic 40.0%
GCATTCATTGTTTCATTGGG+AGG - chr4_3:5195513-5195532 Msa0625850:CDS 40.0%
!! GAGGGCATGAATGAAAGTTT+TGG - chr4_3:5195742-5195761 Msa0625850:five_prime_UTR 40.0%
!! GCTTCATTAACTCTAGGACT+TGG + chr4_3:5195793-5195812 None:intergenic 40.0%
!! GCTATGAGTGCTTTGAGACT+TGG - chr4_3:5190887-5190906 Msa0625850:three_prime_UTR 45.0%
! TTTTCATGAAGAACGCCTGC+AGG - chr4_3:5192004-5192023 Msa0625850:intron 45.0%
ACACCAAATTCATGTCCTGC+AGG + chr4_3:5192022-5192041 None:intergenic 45.0%
AGTACCTGCACATCAGTAAC+AGG + chr4_3:5192273-5192292 None:intergenic 45.0%
! TGTCGACCGTGTTTGTTGAT+CGG - chr4_3:5192369-5192388 Msa0625850:intron 45.0%
GGATATCAGGGTGGAAATCA+AGG - chr4_3:5192421-5192440 Msa0625850:intron 45.0%
TATGACTATTGGGGTCGGAA+CGG + chr4_3:5192458-5192477 None:intergenic 45.0%
TTGCATCTGGATCCAAGTCT+TGG + chr4_3:5192486-5192505 None:intergenic 45.0%
ATAACTTTCGGTGATCGGCT+TGG - chr4_3:5192517-5192536 Msa0625850:intron 45.0%
TCTTCAGTTTAGGCCAGCAT+TGG - chr4_3:5192875-5192894 Msa0625850:CDS 45.0%
TTTCAGTTGGGTTCCAATGC+TGG + chr4_3:5192891-5192910 None:intergenic 45.0%
AGCACAAGGAATGACTAGTG+CGG + chr4_3:5192953-5192972 None:intergenic 45.0%
! CAATTAGGAGCAAGAGCACA+AGG + chr4_3:5192967-5192986 None:intergenic 45.0%
!! GCTATTTTCATGAGCCATCG+TGG - chr4_3:5193134-5193153 Msa0625850:intron 45.0%
TAATTCCTTGGGTATGCTGG+TGG - chr4_3:5193446-5193465 Msa0625850:intron 45.0%
! GGAGCTTTTTGCAGTGATAC+TGG - chr4_3:5193467-5193486 Msa0625850:intron 45.0%
GGAAGATCCAGAGTTGTTAG+AGG - chr4_3:5193499-5193518 Msa0625850:intron 45.0%
CGAATTGCCTCTAACAACTC+TGG + chr4_3:5193509-5193528 None:intergenic 45.0%
CTATCCTCCTTTCTCATTGG+AGG - chr4_3:5193580-5193599 Msa0625850:intron 45.0%
GAGAAGTGAGAATTGCCTGT+TGG + chr4_3:5193627-5193646 None:intergenic 45.0%
! TTAGCAATGGGAGCAGCTTT+TGG - chr4_3:5193694-5193713 Msa0625850:intron 45.0%
ACTTCTACCTCCAAAAGAGC+AGG - chr4_3:5193717-5193736 Msa0625850:CDS 45.0%
! TTCATCACCTGCTCTTTTGG+AGG + chr4_3:5193727-5193746 None:intergenic 45.0%
CGAATGCATTACCTTCGATC+TGG + chr4_3:5194118-5194137 None:intergenic 45.0%
TCTATGTGGAGACAGCTGAT+CGG - chr4_3:5194293-5194312 Msa0625850:intron 45.0%
! AAACCTCCTAAGTTCTGACG+TGG - chr4_3:5194438-5194457 Msa0625850:intron 45.0%
TAATGGCCACGTCAGAACTT+AGG + chr4_3:5194447-5194466 None:intergenic 45.0%
GGCTCATAATCGCTGATAAG+AGG - chr4_3:5194496-5194515 Msa0625850:intron 45.0%
!! TAATGAAAGCGCCTTCCGTT+TGG - chr4_3:5194546-5194565 Msa0625850:intron 45.0%
!! AATGAAAGCGCCTTCCGTTT+GGG - chr4_3:5194547-5194566 Msa0625850:intron 45.0%
ATGAATAAGCCACGCCCAAA+CGG + chr4_3:5194564-5194583 None:intergenic 45.0%
GGCGTGGCTTATTCATTTGT+TGG - chr4_3:5194568-5194587 Msa0625850:intron 45.0%
GGTTACAACTATGAGGGCTA+GGG - chr4_3:5194590-5194609 Msa0625850:intron 45.0%
GTTACAACTATGAGGGCTAG+GGG - chr4_3:5194591-5194610 Msa0625850:intron 45.0%
TTATCCGTAAACCGTAACGC+AGG + chr4_3:5194634-5194653 None:intergenic 45.0%
CACTAGATGCTTGCGCAATA+AGG + chr4_3:5195281-5195300 None:intergenic 45.0%
CTTATTGCGCAAGCATCTAG+TGG - chr4_3:5195279-5195298 Msa0625850:intron 45.0%
! GAGATATTTCTTGAGGCGTC+CGG - chr4_3:5195384-5195403 Msa0625850:intron 45.0%
AAACTGGATTCCTCAGTTGC+CGG + chr4_3:5195406-5195425 None:intergenic 45.0%
ACTGAGTGGGGTTCACTACA+CGG + chr4_3:5191711-5191730 None:intergenic 50.0%
TTGGCATTGTTACCCCTTCC+CGG - chr4_3:5191895-5191914 Msa0625850:intron 50.0%
CTAAAGCTCCTGCATACGCA+GGG + chr4_3:5191922-5191941 None:intergenic 50.0%
ACTAAAGCTCCTGCATACGC+AGG + chr4_3:5191923-5191942 None:intergenic 50.0%
! ATGCAGGAGCTTTAGTGCAC+CGG - chr4_3:5191927-5191946 Msa0625850:intron 50.0%
ACGCCTGCAGGACATGAATT+TGG - chr4_3:5192016-5192035 Msa0625850:intron 50.0%
AGCACCTGTTACTGATGTGC+AGG - chr4_3:5192266-5192285 Msa0625850:intron 50.0%
CTTGGATCCAGATGCAACTG+TGG - chr4_3:5192489-5192508 Msa0625850:intron 50.0%
ATCTCCACCACAGTTGCATC+TGG + chr4_3:5192499-5192518 None:intergenic 50.0%
GCACAAGGAATGACTAGTGC+GGG + chr4_3:5192952-5192971 None:intergenic 50.0%
CAGTGATACTGGCCGAAAAG+TGG - chr4_3:5193478-5193497 Msa0625850:intron 50.0%
TCACCCTCCAATGAGAAAGG+AGG + chr4_3:5193587-5193606 None:intergenic 50.0%
CCTTCGATCTGGACCATCAT+CGG + chr4_3:5194107-5194126 None:intergenic 50.0%
GGGTTACAACTATGAGGGCT+AGG - chr4_3:5194589-5194608 Msa0625850:intron 50.0%
TGTTTGAACCTAGGGGCTCT+TGG - chr4_3:5194858-5194877 Msa0625850:intron 50.0%
GTTGGCAAGAACCTGCAACA+TGG + chr4_3:5195359-5195378 None:intergenic 50.0%
GGGGTTCACTACACGGATCA+GGG + chr4_3:5191704-5191723 None:intergenic 55.0%
TGGGGTTCACTACACGGATC+AGG + chr4_3:5191705-5191724 None:intergenic 55.0%
GTGTAGTGAACCCCACTCAG+TGG - chr4_3:5191710-5191729 Msa0625850:intron 55.0%
! TGCAGGAGCTTTAGTGCACC+GGG - chr4_3:5191928-5191947 Msa0625850:intron 55.0%
GGATCCAGATGCAACTGTGG+TGG - chr4_3:5192492-5192511 Msa0625850:intron 55.0%
AAGCTCCACCAGCATACCCA+AGG + chr4_3:5193454-5193473 None:intergenic 55.0%
! CCGATGATGGTCCAGATCGA+AGG - chr4_3:5194104-5194123 Msa0625850:intron 55.0%
TGGCCACGTCAGAACTTAGG+AGG + chr4_3:5194444-5194463 None:intergenic 55.0%
ATAAGCCACGCCCAAACGGA+AGG + chr4_3:5194560-5194579 None:intergenic 55.0%
AACTATGAGGGCTAGGGGTG+AGG - chr4_3:5194596-5194615 Msa0625850:intron 55.0%
ACTATGAGGGCTAGGGGTGA+GGG - chr4_3:5194597-5194616 Msa0625850:intron 55.0%
GCCACCTGCGTTACGGTTTA+CGG - chr4_3:5194627-5194646 Msa0625850:intron 55.0%
TCCGTAAACCGTAACGCAGG+TGG + chr4_3:5194631-5194650 None:intergenic 55.0%
TGCTTTAGCCAAGAGCCCCT+AGG + chr4_3:5194869-5194888 None:intergenic 55.0%
! TAACAGGTGCTGCCGCTCGA+GGG + chr4_3:5192257-5192276 None:intergenic 60.0%
GAATGACTAGTGCGGGCCAG+TGG + chr4_3:5192945-5192964 None:intergenic 60.0%
CTATGAGGGCTAGGGGTGAG+GGG - chr4_3:5194598-5194617 Msa0625850:intron 60.0%
TATGAGGGCTAGGGGTGAGG+GGG - chr4_3:5194599-5194618 Msa0625850:intron 60.0%
AATCAGCAAGCCCCTGCAGC+AGG - chr4_3:5194918-5194937 Msa0625850:intron 60.0%
CATACGCAGGGTCCGGGAAG+GGG + chr4_3:5191910-5191929 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr4_3:5191911-5191930 None:intergenic 65.0%
TGCATACGCAGGGTCCGGGA+AGG + chr4_3:5191912-5191931 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+AGG - chr4_3:5191911-5191930 Msa0625850:intron 65.0%
CTCCTGCATACGCAGGGTCC+GGG + chr4_3:5191916-5191935 None:intergenic 65.0%
GCTCCTGCATACGCAGGGTC+CGG + chr4_3:5191917-5191936 None:intergenic 65.0%
! GTAACAGGTGCTGCCGCTCG+AGG + chr4_3:5192258-5192277 None:intergenic 65.0%
TGACTAGTGCGGGCCAGTGG+TGG + chr4_3:5192942-5192961 None:intergenic 65.0%
GTGGAGACAGCTGATCGGCC+TGG - chr4_3:5194298-5194317 Msa0625850:intron 65.0%
AAGCGCCTTCCGTTTGGGCG+TGG - chr4_3:5194552-5194571 Msa0625850:intron 65.0%
ATGAGGGCTAGGGGTGAGGG+GGG - chr4_3:5194600-5194619 Msa0625850:intron 65.0%
GGGCTTCGCCACCTGCGTTA+CGG - chr4_3:5194620-5194639 Msa0625850:intron 65.0%
! CTTGAGGCGTCCGGCAACTG+AGG - chr4_3:5195393-5195412 Msa0625850:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 5190625 5195814 5190625 ID=Msa0625850;Name=Msa0625850
chr4_3 mRNA 5190625 5195814 5190625 ID=Msa0625850-mRNA-1;Parent=Msa0625850;Name=Msa0625850-mRNA-1;_AED=0.05;_eAED=0.05;_QI=259|1|1|1|1|1|10|370|296
chr4_3 exon 5190625 5191072 5190625 ID=Msa0625850-mRNA-1:exon:1458;Parent=Msa0625850-mRNA-1
chr4_3 exon 5191500 5191568 5191500 ID=Msa0625850-mRNA-1:exon:1457;Parent=Msa0625850-mRNA-1
chr4_3 exon 5192046 5192151 5192046 ID=Msa0625850-mRNA-1:exon:1456;Parent=Msa0625850-mRNA-1
chr4_3 exon 5192314 5192369 5192314 ID=Msa0625850-mRNA-1:exon:1455;Parent=Msa0625850-mRNA-1
chr4_3 exon 5192701 5192760 5192701 ID=Msa0625850-mRNA-1:exon:1454;Parent=Msa0625850-mRNA-1
chr4_3 exon 5192874 5192958 5192874 ID=Msa0625850-mRNA-1:exon:1453;Parent=Msa0625850-mRNA-1
chr4_3 exon 5193705 5193799 5193705 ID=Msa0625850-mRNA-1:exon:1452;Parent=Msa0625850-mRNA-1
chr4_3 exon 5193884 5194009 5193884 ID=Msa0625850-mRNA-1:exon:1451;Parent=Msa0625850-mRNA-1
chr4_3 exon 5194152 5194212 5194152 ID=Msa0625850-mRNA-1:exon:1450;Parent=Msa0625850-mRNA-1
chr4_3 exon 5195401 5195814 5195401 ID=Msa0625850-mRNA-1:exon:1449;Parent=Msa0625850-mRNA-1
chr4_3 five_prime_UTR 5195556 5195814 5195556 ID=Msa0625850-mRNA-1:five_prime_utr;Parent=Msa0625850-mRNA-1
chr4_3 CDS 5195401 5195555 5195401 ID=Msa0625850-mRNA-1:cds;Parent=Msa0625850-mRNA-1
chr4_3 CDS 5194152 5194212 5194152 ID=Msa0625850-mRNA-1:cds;Parent=Msa0625850-mRNA-1
chr4_3 CDS 5193884 5194009 5193884 ID=Msa0625850-mRNA-1:cds;Parent=Msa0625850-mRNA-1
chr4_3 CDS 5193705 5193799 5193705 ID=Msa0625850-mRNA-1:cds;Parent=Msa0625850-mRNA-1
chr4_3 CDS 5192874 5192958 5192874 ID=Msa0625850-mRNA-1:cds;Parent=Msa0625850-mRNA-1
chr4_3 CDS 5192701 5192760 5192701 ID=Msa0625850-mRNA-1:cds;Parent=Msa0625850-mRNA-1
chr4_3 CDS 5192314 5192369 5192314 ID=Msa0625850-mRNA-1:cds;Parent=Msa0625850-mRNA-1
chr4_3 CDS 5192046 5192151 5192046 ID=Msa0625850-mRNA-1:cds;Parent=Msa0625850-mRNA-1
chr4_3 CDS 5191500 5191568 5191500 ID=Msa0625850-mRNA-1:cds;Parent=Msa0625850-mRNA-1
chr4_3 CDS 5190995 5191072 5190995 ID=Msa0625850-mRNA-1:cds;Parent=Msa0625850-mRNA-1
chr4_3 three_prime_UTR 5190625 5190994 5190625 ID=Msa0625850-mRNA-1:three_prime_utr;Parent=Msa0625850-mRNA-1
Gene Sequence

>Msa0625850

ATGGCTATGAGTGCTTTGAGACTTGGATTTCACTTCAGTGCTGCTACTGATAATAGTTTGAGAGTTTTGGAAAAACCCATTTTCTGTGTCCCTTTTTTGAATGCTTCTTCTGGCTTTGTTTCTACTAAGCCATGTTACTTTCTTCACAAAAGAAGGTTGTTATCTTCTGGAACTACTATTATCCCTCGAGCGGCAGCACCTGTTACTGATGTGCAGGGTGGAAATCAAGGTGAGACTGATACCGTTCCGACCCCAATAGTCATAATTGACCAAGACTTGGATCCAGATGCAACTGTGGTGGAGATAACTTTCGGTGATCGGCTTGGAGCTCTTCTTGACACAATGAGTGCATTAAAAGACTTAGGCCTCAATGTTGTTAAGGCAAATGTTTTTCTGGATTCTTCTGGCAAGCACAACAAGTTTTCCATCACAAAAGCTGATACTGGCCGAAAAGTGGAAGATCCAGAGTTGTTAGAGGCAATTCGTTTGACAATTATAAATAATCTGATTCAGTATCACCCGGAATCAAGTTCTCAGTTAGCAATGGGAGCAGCTTTTGGACTTCTACCTCCAAAAGAGCAGGTTGATGTGGACATTGCAACTCACATAAACATATCCGATGATGGTCCAGATCGAAGTTTGTTCTATGTGGAGACAGCTGATCGGCCTGGATTACTTGTCGATCTTGTAAAAAGTATTACTGACATTGACATTGCTGTTGAATCTGGAGAATTTGACACTGAGGGGCTCTTGGCTAAAGCAAAGTTTCATGTTAGCTACAAAGGCAAAGCAATCAGCAAGCCCCTGCAGCAGGTTCTTGCCAACAGCTTGAGATATTTCTTGAGGCGTCCGGCAACTGAGGAATCCAGTTTTGAAGGGCATCTCTTTTGA

Protein sequence

>Msa0625850

MAMSALRLGFHFSAATDNSLRVLEKPIFCVPFLNASSGFVSTKPCYFLHKRRLLSSGTTIIPRAAAPVTDVQGGNQGETDTVPTPIVIIDQDLDPDATVVEITFGDRLGALLDTMSALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPKEQVDVDIATHINISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVSYKGKAISKPLQQVLANSLRYFLRRPATEESSFEGHLF*