AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0663650


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663650 MtrunA17_Chr4g0001421 89.003 291 8 1 1 267 3 293 0.0 513
Msa0663650 MtrunA17_Chr2g0333871 71.331 293 53 5 1 267 3 290 1.88e-135 384
Msa0663650 MtrunA17_Chr1g0210741 56.132 212 69 1 80 267 69 280 2.90e-79 240
Msa0663650 MtrunA17_Chr7g0224571 28.415 183 110 5 85 254 15 189 2.35e-13 69.3
Msa0663650 MtrunA17_Chr5g0420221 29.121 182 107 6 85 253 31 203 9.24e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663650 AT1G16880.1 64.925 268 60 5 28 267 29 290 8.67e-115 332
Msa0663650 AT5G04740.1 55.760 217 72 1 75 267 85 301 2.58e-82 249
Msa0663650 AT1G16880.2 67.059 170 46 4 28 193 29 192 2.18e-72 221
Msa0663650 AT5G04740.2 47.059 119 39 1 173 267 82 200 7.67e-31 114
Msa0663650 AT3G01990.8 28.415 183 111 5 85 254 16 191 1.79e-13 69.3
Msa0663650 AT3G01990.3 28.415 183 111 5 85 254 30 205 1.92e-13 69.3
Msa0663650 AT3G01990.2 28.415 183 111 5 85 254 30 205 2.28e-13 69.3
Msa0663650 AT3G01990.4 28.415 183 111 5 85 254 30 205 2.34e-13 69.3
Msa0663650 AT3G01990.9 28.415 183 111 5 85 254 16 191 2.37e-13 69.3
Msa0663650 AT3G01990.7 28.415 183 111 5 85 254 30 205 2.87e-13 69.7
Msa0663650 AT3G01990.5 28.415 183 111 5 85 254 30 205 2.87e-13 69.7
Msa0663650 AT3G01990.10 28.415 183 111 5 85 254 16 191 2.99e-13 69.3
Msa0663650 AT3G01990.1 28.415 183 111 5 85 254 16 191 2.99e-13 69.3
Msa0663650 AT3G01990.6 28.415 183 111 5 85 254 30 205 3.06e-13 69.3
Msa0663650 AT3G01990.11 28.415 183 111 5 85 254 16 191 3.09e-13 69.3
Msa0663650 AT1G69040.1 30.055 183 110 6 85 258 21 194 4.09e-11 63.2
Msa0663650 AT1G69040.2 30.055 183 110 6 85 258 25 198 4.64e-11 63.2

Find 75 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATAAAATACTGTATTTA+TGG 0.151469 4_4:-2563581 Msa0663650:three_prime_UTR
TTTGTCAGGTTGTTGTCTTC+TGG 0.190236 4_4:-2567085 Msa0663650:intron
CTTTAAATGCTGCTGATATT+TGG 0.198365 4_4:-2563657 Msa0663650:three_prime_UTR
TGATAATAGTTTGAGAGTTT+TGG 0.215649 4_4:-2568311 Msa0663650:CDS
AGATTCATCACCTGCTCTTT+TGG 0.222017 4_4:+2565574 None:intergenic
TCTTGGTCAATTATGACTAT+TGG 0.255614 4_4:+2566838 None:intergenic
ATGTCAAATTTGTAAGAATT+AGG 0.273115 4_4:+2568466 None:intergenic
AATCATAAAACTGAATTAAC+AGG 0.273586 4_4:-2563734 Msa0663650:three_prime_UTR
TTAGCAATGGGAGCAGCTTT+TGG 0.275092 4_4:-2565607 Msa0663650:CDS
CTTGGTCAATTATGACTATT+GGG 0.278108 4_4:+2566839 None:intergenic
ATTGACATTGCTGTTGAATC+TGG 0.326851 4_4:-2564946 Msa0663650:CDS
GTTTGCATTCATTGTTTCAT+TGG 0.328185 4_4:-2563790 Msa0663650:three_prime_UTR
GAGGAGAAATGAAGAATAAC+TGG 0.343325 4_4:-2563767 Msa0663650:three_prime_UTR
TTTGCATTCATTGTTTCATT+GGG 0.396621 4_4:-2563789 Msa0663650:three_prime_UTR
TGTTTGAACCTAGGGGCTCT+TGG 0.406397 4_4:-2564443 Msa0663650:intron
ATCTCCACCACAGTTGCATC+TGG 0.413372 4_4:+2566808 None:intergenic
CTTAGGCCTCAATGTTGTTA+AGG 0.415434 4_4:-2566647 Msa0663650:CDS
GTTACTTTCTTCACAAAAGA+AGG 0.417045 4_4:-2568225 Msa0663650:intron
GCTATGAGTGCTTTGAGACT+TGG 0.418351 4_4:-2568355 Msa0663650:CDS
AGTACCTGCACATCAGTAAC+AGG 0.440436 4_4:+2567034 None:intergenic
GAGGGCATGAATGAAAGTTT+TGG 0.442821 4_4:-2563557 Msa0663650:three_prime_UTR
AAACTGGATTCCTCAGTTGC+CGG 0.443051 4_4:+2563897 None:intergenic
GGAAGATCCAGAGTTGTTAG+AGG 0.470609 4_4:-2565802 Msa0663650:CDS
AGATTAAAGTTACCTGCTGC+AGG 0.475170 4_4:+2564371 None:intergenic
TGGAGATAACTTTCGGTGAT+CGG 0.475265 4_4:-2566792 Msa0663650:CDS
CGAATTGCCTCTAACAACTC+TGG 0.479030 4_4:+2565795 None:intergenic
GCTTCATTAACTCTAGGACT+TGG 0.480271 4_4:+2563508 None:intergenic
AATCAGCAAGCCCCTGCAGC+AGG 0.483771 4_4:-2564383 Msa0663650:intron
CTCTCTGCTTCATTAACTCT+AGG 0.486414 4_4:+2563502 None:intergenic
GTGGAGACAGCTGATCGGCC+TGG 0.489025 4_4:-2565003 Msa0663650:intron
AATAAAGTAAAATAAGAGAC+AGG 0.493335 4_4:+2568585 None:intergenic
TTCATATGAATGAAACAAAA+CGG 0.504007 4_4:+2568501 None:intergenic
ATAACTTTCGGTGATCGGCT+TGG 0.510246 4_4:-2566787 Msa0663650:CDS
TCAAGTTCTCAGTTAGCAAT+GGG 0.515912 4_4:-2565619 Msa0663650:CDS
CAGTGATACTGGCCGAAAAG+TGG 0.519005 4_4:-2565823 Msa0663650:CDS
GGATATCAGGGTGGAAATCA+AGG 0.522473 4_4:-2566883 Msa0663650:intron
GAGATATTTCTTGAGGCGTC+CGG 0.523812 4_4:-2563916 Msa0663650:CDS
AAGTTTCATGTTAGCTACAA+AGG 0.527152 4_4:-2564412 Msa0663650:CDS
GCATTCATTGTTTCATTGGG+AGG 0.530901 4_4:-2563786 Msa0663650:three_prime_UTR
AGCACCTGTTACTGATGTGC+AGG 0.531571 4_4:-2567038 Msa0663650:intron
AATCTCCAGTTATTGAAAAG+TGG 0.534195 4_4:+2563531 None:intergenic
TTGCATCTGGATCCAAGTCT+TGG 0.535486 4_4:+2566821 None:intergenic
AAAATACTGTATTTATGGTG+AGG 0.545823 4_4:-2563576 Msa0663650:three_prime_UTR
ATCAAGTTCTCAGTTAGCAA+TGG 0.546569 4_4:-2565620 Msa0663650:CDS
AAATACTGTATTTATGGTGA+GGG 0.549877 4_4:-2563575 Msa0663650:three_prime_UTR
TTGTTTCATTCATATGAATG+TGG 0.556654 4_4:-2568496 Msa0663650:five_prime_UTR
ATTAAAGTTACCTGCTGCAG+GGG 0.562709 4_4:+2564373 None:intergenic
ACAAGATCGACAAGTAATCC+AGG 0.566828 4_4:+2564985 None:intergenic
CATTTGCCTTAACAACATTG+AGG 0.567718 4_4:+2566641 None:intergenic
AGTCATAATTGACCAAGACT+TGG 0.567923 4_4:-2566833 Msa0663650:CDS
GTAACAGGTGCTGCCGCTCG+AGG 0.568447 4_4:+2567049 None:intergenic
CAAGAAATATCTCAAGCTGT+TGG 0.569442 4_4:+2563926 None:intergenic
AGTATAACACCACCATGGAT+TGG 0.571048 4_4:-2563818 Msa0663650:three_prime_UTR
CTTGAGGCGTCCGGCAACTG+AGG 0.581879 4_4:-2563907 Msa0663650:CDS
TAACAGGTGCTGCCGCTCGA+GGG 0.586405 4_4:+2567050 None:intergenic
GATTAAAGTTACCTGCTGCA+GGG 0.589784 4_4:+2564372 None:intergenic
ACTTCTACCTCCAAAAGAGC+AGG 0.595122 4_4:-2565584 Msa0663650:intron
TGCAAACATTCACCAATCCA+TGG 0.598744 4_4:+2563806 None:intergenic
AGTAAAATAAGAGACAGGAA+TGG 0.599760 4_4:+2568590 None:intergenic
ACAGCTTGAGATATTTCTTG+AGG 0.602665 4_4:-2563923 Msa0663650:CDS
TCAATTATGACTATTGGGGT+CGG 0.614778 4_4:+2566844 None:intergenic
TATGACTATTGGGGTCGGAA+CGG 0.615998 4_4:+2566849 None:intergenic
CTCCAGTTATTGAAAAGTGG+TGG 0.630012 4_4:+2563534 None:intergenic
ACTGTGGTGGAGATAACTTT+CGG 0.631847 4_4:-2566799 Msa0663650:CDS
TCTATGTGGAGACAGCTGAT+CGG 0.632715 4_4:-2565008 Msa0663650:intron
ATCATAAAACTGAATTAACA+GGG 0.638526 4_4:-2563733 Msa0663650:three_prime_UTR
TTGGTCAATTATGACTATTG+GGG 0.653500 4_4:+2566840 None:intergenic
TTTGGAGTATAACACCACCA+TGG 0.661005 4_4:-2563823 Msa0663650:three_prime_UTR
CTTGGATCCAGATGCAACTG+TGG 0.661276 4_4:-2566815 Msa0663650:CDS
AACTACTATTATCCCTCGAG+CGG 0.661528 4_4:-2567062 Msa0663650:CDS
ATGAGTGCATTAAAAGACTT+AGG 0.662772 4_4:-2566664 Msa0663650:CDS
TAATCTGATTCAGTATCACC+CGG 0.667172 4_4:-2565757 Msa0663650:intron
GGATCCAGATGCAACTGTGG+TGG 0.679796 4_4:-2566812 Msa0663650:CDS
ATCTGGAGAATTTGACACTG+AGG 0.685475 4_4:-2564929 Msa0663650:intron
AAACATTCACCAATCCATGG+TGG 0.770447 4_4:+2563809 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATATATTCAAAAGT+GGG + chr4_4:2564628-2564647 None:intergenic 10.0%
!! AAAAAATATATATTCAAAAG+TGG + chr4_4:2564629-2564648 None:intergenic 10.0%
!! AAAATAAAATACTGTATTTA+TGG - chr4_4:2568542-2568561 Msa0663650:five_prime_UTR 10.0%
!!! TCATTTTGAACTAAAAAAAA+AGG - chr4_4:2563740-2563759 Msa0663650:three_prime_UTR 15.0%
!!! ATTTTTTTACAAAATTGTAG+TGG - chr4_4:2564642-2564661 Msa0663650:intron 15.0%
!! ATTTATTCTGTTATTAGATT+TGG - chr4_4:2564727-2564746 Msa0663650:intron 15.0%
!! ATTAATTAAGTTAGTAGATT+AGG - chr4_4:2564862-2564881 Msa0663650:intron 15.0%
!!! TTATTTTTGTTTCTTTTATG+TGG - chr4_4:2565219-2565238 Msa0663650:intron 15.0%
!!! TAAGCTATTTCTATAATAAA+AGG - chr4_4:2565879-2565898 Msa0663650:intron 15.0%
!!! AAACAATTTGACTTTTTTTT+TGG + chr4_4:2565928-2565947 None:intergenic 15.0%
!!! TTCTGTAATGTATATTTTAT+TGG + chr4_4:2566697-2566716 None:intergenic 15.0%
!!! ATCTTGATTTTTTATCATTT+AGG + chr4_4:2568041-2568060 None:intergenic 15.0%
!! AATAAAGTAAAATAAGAGAC+AGG + chr4_4:2563541-2563560 None:intergenic 20.0%
!! TTCATATGAATGAAACAAAA+CGG + chr4_4:2563625-2563644 None:intergenic 20.0%
!! ATGTCAAATTTGTAAGAATT+AGG + chr4_4:2563660-2563679 None:intergenic 20.0%
!! TCATAAATCATATCTATGAA+TGG + chr4_4:2564128-2564147 None:intergenic 20.0%
!! TTAAATCTTGAATTACTTTG+AGG + chr4_4:2564342-2564361 None:intergenic 20.0%
!! TTGAATTTCTAATACTGTTT+AGG + chr4_4:2566156-2566175 None:intergenic 20.0%
!! TTCTGTAAATTGAAAAGATA+AGG - chr4_4:2566634-2566653 Msa0663650:CDS 20.0%
!! TCTGTAAATTGAAAAGATAA+GGG - chr4_4:2566635-2566654 Msa0663650:CDS 20.0%
!! TGTTAAAGTCATGATATATA+AGG - chr4_4:2567012-2567031 Msa0663650:intron 20.0%
!! ATATGTTTGGTAAATTGTAA+TGG + chr4_4:2568018-2568037 None:intergenic 20.0%
!!! TTTATCATTTAGGATATGTT+TGG + chr4_4:2568031-2568050 None:intergenic 20.0%
!!! CATGACATTATATTTTCTTT+TGG - chr4_4:2568282-2568301 Msa0663650:CDS 20.0%
!! AATCATAAAACTGAATTAAC+AGG - chr4_4:2568389-2568408 Msa0663650:five_prime_UTR 20.0%
!! ATCATAAAACTGAATTAACA+GGG - chr4_4:2568390-2568409 Msa0663650:five_prime_UTR 20.0%
! TTGTTTCATTCATATGAATG+TGG - chr4_4:2563627-2563646 Msa0663650:three_prime_UTR 25.0%
!!! AAGTTAGGATTTTGAGAAAT+GGG + chr4_4:2563696-2563715 None:intergenic 25.0%
!!! AAAGTTAGGATTTTGAGAAA+TGG + chr4_4:2563697-2563716 None:intergenic 25.0%
! TGAACTAAAAAAAAAGGCTA+TGG - chr4_4:2563746-2563765 Msa0663650:three_prime_UTR 25.0%
!! TGATAATAGTTTGAGAGTTT+TGG - chr4_4:2563812-2563831 Msa0663650:three_prime_UTR 25.0%
!! TTAGAATTTGAGCTTTTAGT+AGG - chr4_4:2564020-2564039 Msa0663650:intron 25.0%
! AAAATAGTTCTTCTGATTCA+CGG + chr4_4:2564201-2564220 None:intergenic 25.0%
! TATTCAAAAGTGGGTATAAT+TGG + chr4_4:2564619-2564638 None:intergenic 25.0%
! GGAACTCATTTACTTATATT+TGG - chr4_4:2564663-2564682 Msa0663650:intron 25.0%
! TTCTTCATGAAAATATGACA+AGG + chr4_4:2564816-2564835 None:intergenic 25.0%
! ATTAAGTTAGTAGATTAGGT+TGG - chr4_4:2564866-2564885 Msa0663650:intron 25.0%
!! AATAGTAAACGTTTGAAACT+TGG - chr4_4:2564932-2564951 Msa0663650:CDS 25.0%
!! ATAGTAAACGTTTGAAACTT+GGG - chr4_4:2564933-2564952 Msa0663650:CDS 25.0%
! ATACAATTAACACACAGAAA+TGG + chr4_4:2565000-2565019 None:intergenic 25.0%
!! TTTCTTTTATGTGGATATCA+GGG - chr4_4:2565228-2565247 Msa0663650:intron 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG + chr4_4:2565829-2565848 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG + chr4_4:2565830-2565849 None:intergenic 25.0%
!! ATATCATAAGTTGTTTCCAT+TGG - chr4_4:2565992-2566011 Msa0663650:intron 25.0%
! TCAAATAAGTCAATCCAAAT+AGG - chr4_4:2566057-2566076 Msa0663650:intron 25.0%
! ATTTCTAATACTGTTTAGGT+AGG + chr4_4:2566152-2566171 None:intergenic 25.0%
!! CAAGATATTTGTTGCTTAAA+AGG + chr4_4:2566222-2566241 None:intergenic 25.0%
!! CTTTTAAGCAACAAATATCT+TGG - chr4_4:2566220-2566239 Msa0663650:intron 25.0%
!! AATTTTCAAATCGATGATTC+AGG - chr4_4:2566479-2566498 Msa0663650:intron 25.0%
! TTATTGGTGAAAAATGAAAC+AGG + chr4_4:2566681-2566700 None:intergenic 25.0%
! ATACATTACAGAAGACATTA+TGG - chr4_4:2566704-2566723 Msa0663650:intron 25.0%
! TTCTTTCTATTTGTGATAGA+GGG + chr4_4:2566847-2566866 None:intergenic 25.0%
! TTTCTTTCTATTTGTGATAG+AGG + chr4_4:2566848-2566867 None:intergenic 25.0%
! ATACTCATGCTTTCTAATTT+CGG - chr4_4:2567045-2567064 Msa0663650:CDS 25.0%
!!! ATTTTGTAGTTTGTTCTATG+TGG - chr4_4:2567101-2567120 Msa0663650:intron 25.0%
!!! GATACATTCATTTTGAGTAA+TGG + chr4_4:2567286-2567305 None:intergenic 25.0%
! TCCTACTATTCAATGAATTA+GGG + chr4_4:2567535-2567554 None:intergenic 25.0%
! TTCCTACTATTCAATGAATT+AGG + chr4_4:2567536-2567555 None:intergenic 25.0%
! GATTGTTAGAATAGAAAATC+TGG + chr4_4:2567597-2567616 None:intergenic 25.0%
! TTGAGCTTCAAAAAAAAAGA+AGG - chr4_4:2567627-2567646 Msa0663650:intron 25.0%
! TGAGCTTCAAAAAAAAAGAA+GGG - chr4_4:2567628-2567647 Msa0663650:intron 25.0%
! ATGATTAAAGTAGATTTGTC+TGG - chr4_4:2567879-2567898 Msa0663650:intron 25.0%
! CTATAAACTATACGCTATAA+GGG + chr4_4:2567972-2567991 None:intergenic 25.0%
! TTTGCATTCATTGTTTCATT+GGG - chr4_4:2568334-2568353 Msa0663650:CDS 25.0%
! AAAATACTGTATTTATGGTG+AGG - chr4_4:2568547-2568566 Msa0663650:five_prime_UTR 25.0%
! AAATACTGTATTTATGGTGA+GGG - chr4_4:2568548-2568567 Msa0663650:five_prime_UTR 25.0%
AGTAAAATAAGAGACAGGAA+TGG + chr4_4:2563536-2563555 None:intergenic 30.0%
!!! AAACGGTTGTTTCTGTTTTT+TGG + chr4_4:2563608-2563627 None:intergenic 30.0%
CAGAGAAAAGAGAAAAAGTT+AGG + chr4_4:2563711-2563730 None:intergenic 30.0%
AAAAAAGGGACACAGAAAAT+GGG + chr4_4:2563843-2563862 None:intergenic 30.0%
!! CAGAAGAAGCATTCAAAAAA+GGG + chr4_4:2563857-2563876 None:intergenic 30.0%
! CTTTTGTGAAGAAAGTAACA+TGG + chr4_4:2563897-2563916 None:intergenic 30.0%
! GTTACTTTCTTCACAAAAGA+AGG - chr4_4:2563898-2563917 Msa0663650:CDS 30.0%
!! GGTAAATTAGCTTTGATCAT+TGG - chr4_4:2563919-2563938 Msa0663650:CDS 30.0%
!! GCTTTGATCATTGGTTATTT+TGG - chr4_4:2563928-2563947 Msa0663650:CDS 30.0%
! GAGGTGTATTTTCGAAATAT+CGG + chr4_4:2564323-2564342 None:intergenic 30.0%
CAAGATGTATAGACTAACTT+AGG - chr4_4:2564410-2564429 Msa0663650:CDS 30.0%
AGTATACATCATAGTGAATC+AGG - chr4_4:2564443-2564462 Msa0663650:intron 30.0%
CTTGCATTGCTATGTTAATT+TGG - chr4_4:2564698-2564717 Msa0663650:intron 30.0%
CAGAAATGGACATATTACTT+AGG + chr4_4:2564986-2565005 None:intergenic 30.0%
GCATTATAGAGATGAACTAT+GGG + chr4_4:2565167-2565186 None:intergenic 30.0%
AGCATTATAGAGATGAACTA+TGG + chr4_4:2565168-2565187 None:intergenic 30.0%
! TTTTTACCGATCAACAAACA+CGG + chr4_4:2565197-2565216 None:intergenic 30.0%
! GTTTCTTTTATGTGGATATC+AGG - chr4_4:2565227-2565246 Msa0663650:intron 30.0%
TTGGTCAATTATGACTATTG+GGG + chr4_4:2565286-2565305 None:intergenic 30.0%
CTTGGTCAATTATGACTATT+GGG + chr4_4:2565287-2565306 None:intergenic 30.0%
TCTTGGTCAATTATGACTAT+TGG + chr4_4:2565288-2565307 None:intergenic 30.0%
!!! TATCTGTTGCTTTTTCTTAG+AGG - chr4_4:2565414-2565433 Msa0663650:intron 30.0%
!!! ATCTGTTGCTTTTTCTTAGA+GGG - chr4_4:2565415-2565434 Msa0663650:intron 30.0%
ATGAGTGCATTAAAAGACTT+AGG - chr4_4:2565459-2565478 Msa0663650:intron 30.0%
! TGTTAAGGCAAATGTTTTTC+TGG - chr4_4:2565491-2565510 Msa0663650:intron 30.0%
! AATGTTTTTCTGGATTCTTC+TGG - chr4_4:2565501-2565520 Msa0663650:intron 30.0%
AATATCTGAGAGTTTCAGTT+GGG + chr4_4:2565723-2565742 None:intergenic 30.0%
!! TATTTTATTTACTCCACCAC+TGG - chr4_4:2565746-2565765 Msa0663650:intron 30.0%
TGATGAATCTCTTTACTTCT+CGG - chr4_4:2566562-2566581 Msa0663650:intron 30.0%
! TGTGAATTTTTCATTCTCTC+TGG - chr4_4:2566599-2566618 Msa0663650:CDS 30.0%
TTCATTACCAATTGTCATTC+AGG - chr4_4:2566870-2566889 Msa0663650:CDS 30.0%
GAATGTATCAATGTTGAGTA+TGG - chr4_4:2567297-2567316 Msa0663650:intron 30.0%
ACCCTAATTCATTGAATAGT+AGG - chr4_4:2567531-2567550 Msa0663650:intron 30.0%
GAGCTTCAAAAAAAAAGAAG+GGG - chr4_4:2567629-2567648 Msa0663650:intron 30.0%
!!! ACAAAGCTTTTTCATCAGAT+TGG + chr4_4:2567663-2567682 None:intergenic 30.0%
!! AAAAAGCTTTGTTTGAACCT+AGG - chr4_4:2567671-2567690 Msa0663650:intron 30.0%
!! AAAAGCTTTGTTTGAACCTA+GGG - chr4_4:2567672-2567691 Msa0663650:intron 30.0%
AAGTTTCATGTTAGCTACAA+AGG - chr4_4:2567711-2567730 Msa0663650:intron 30.0%
TTTAATCGTCAAGTACTCTT+TGG - chr4_4:2567805-2567824 Msa0663650:intron 30.0%
TGTTATTCGTTGTAAGCTAA+TGG + chr4_4:2567841-2567860 None:intergenic 30.0%
AAGTAGATTTGTCTGGTAAA+CGG - chr4_4:2567886-2567905 Msa0663650:intron 30.0%
GCTATAAACTATACGCTATA+AGG + chr4_4:2567973-2567992 None:intergenic 30.0%
AACTCATAGTACATTGAAGT+AGG - chr4_4:2568069-2568088 Msa0663650:intron 30.0%
GTTTGCATTCATTGTTTCAT+TGG - chr4_4:2568333-2568352 Msa0663650:CDS 30.0%
CTTTAAATGCTGCTGATATT+TGG - chr4_4:2568466-2568485 Msa0663650:five_prime_UTR 30.0%
AATCTCCAGTTATTGAAAAG+TGG + chr4_4:2568595-2568614 None:intergenic 30.0%
CAAAAAAGGGACACAGAAAA+TGG + chr4_4:2563844-2563863 None:intergenic 35.0%
!! CCAGAAGAAGCATTCAAAAA+AGG + chr4_4:2563858-2563877 None:intergenic 35.0%
!!! CCTTTTTTGAATGCTTCTTC+TGG - chr4_4:2563855-2563874 Msa0663650:three_prime_UTR 35.0%
! GAATTTGAGCTTTTAGTAGG+TGG - chr4_4:2564023-2564042 Msa0663650:intron 35.0%
TCAAACGTCGTCATAATACT+CGG + chr4_4:2564151-2564170 None:intergenic 35.0%
CAAACAAGTCATATACCACT+GGG + chr4_4:2564583-2564602 None:intergenic 35.0%
ACAAACAAGTCATATACCAC+TGG + chr4_4:2564584-2564603 None:intergenic 35.0%
TAACATAGCAATGCAAGCAA+AGG + chr4_4:2564695-2564714 None:intergenic 35.0%
! GCATTGTTATTGATGTATGC+AGG - chr4_4:2564749-2564768 Msa0663650:intron 35.0%
TTACTGCTCTTTCTTTCGTT+TGG - chr4_4:2564906-2564925 Msa0663650:intron 35.0%
! TATGTATGTACCCTTTTGTC+AGG - chr4_4:2565024-2565043 Msa0663650:intron 35.0%
AAGACAACAACCTGACAAAA+GGG + chr4_4:2565037-2565056 None:intergenic 35.0%
GCAAATAACGACAATCACAT+AGG + chr4_4:2565127-2565146 None:intergenic 35.0%
TCAATTATGACTATTGGGGT+CGG + chr4_4:2565282-2565301 None:intergenic 35.0%
AGTCATAATTGACCAAGACT+TGG - chr4_4:2565290-2565309 Msa0663650:intron 35.0%
CATTTGCCTTAACAACATTG+AGG + chr4_4:2565485-2565504 None:intergenic 35.0%
! TAACACTTACGCTTTTGTGA+TGG + chr4_4:2565544-2565563 None:intergenic 35.0%
GAATATCTGAGAGTTTCAGT+TGG + chr4_4:2565724-2565743 None:intergenic 35.0%
TTAGAGTAGATGGTGCAATT+AGG + chr4_4:2565802-2565821 None:intergenic 35.0%
TATCTATAAGTTCTCCACGA+TGG + chr4_4:2565973-2565992 None:intergenic 35.0%
! TGTTTAGCTCGCATAAAGAA+AGG + chr4_4:2566083-2566102 None:intergenic 35.0%
AGCAACAAATATCTTGGATG+AGG - chr4_4:2566226-2566245 Msa0663650:intron 35.0%
TCGCTTCTTTAGTAATTCCT+TGG - chr4_4:2566256-2566275 Msa0663650:intron 35.0%
CGCTTCTTTAGTAATTCCTT+GGG - chr4_4:2566257-2566276 Msa0663650:intron 35.0%
TAATCTGATTCAGTATCACC+CGG - chr4_4:2566366-2566385 Msa0663650:intron 35.0%
TGGTTGTAATATATGCCAAC+AGG - chr4_4:2566431-2566450 Msa0663650:intron 35.0%
ATCAAGTTCTCAGTTAGCAA+TGG - chr4_4:2566503-2566522 Msa0663650:intron 35.0%
TCAAGTTCTCAGTTAGCAAT+GGG - chr4_4:2566504-2566523 Msa0663650:intron 35.0%
TTTCTATTTGTGATAGAGGG+AGG + chr4_4:2566844-2566863 None:intergenic 35.0%
ACATCAACCTGAATGACAAT+TGG + chr4_4:2566880-2566899 None:intergenic 35.0%
!! AATTGTCATTCAGGTTGATG+TGG - chr4_4:2566879-2566898 Msa0663650:intron 35.0%
CACATAAACATATCCGATGA+TGG - chr4_4:2566913-2566932 Msa0663650:intron 35.0%
! ATTGACATTGCTGTTGAATC+TGG - chr4_4:2567177-2567196 Msa0663650:intron 35.0%
TTTGTTGGGTTACAACTATG+AGG - chr4_4:2567405-2567424 Msa0663650:intron 35.0%
TTGTTGGGTTACAACTATGA+GGG - chr4_4:2567406-2567425 Msa0663650:intron 35.0%
!! AAAGCTTTGTTTGAACCTAG+GGG - chr4_4:2567673-2567692 Msa0663650:intron 35.0%
ATTTGTCTGGTAAACGGTAA+TGG - chr4_4:2567892-2567911 Msa0663650:intron 35.0%
CTTCATATTTACCATGTTGC+AGG - chr4_4:2568168-2568187 Msa0663650:intron 35.0%
CAAGAAATATCTCAAGCTGT+TGG + chr4_4:2568200-2568219 None:intergenic 35.0%
ACAGCTTGAGATATTTCTTG+AGG - chr4_4:2568200-2568219 Msa0663650:intron 35.0%
! TGAGGAATCCAGTTTTTGAA+GGG - chr4_4:2568234-2568253 Msa0663650:CDS 35.0%
GAGGAGAAATGAAGAATAAC+TGG - chr4_4:2568356-2568375 Msa0663650:CDS 35.0%
! GAGCTTTTAGTAGGTGGTTA+TGG - chr4_4:2564029-2564048 Msa0663650:intron 40.0%
GTGCAAAATTGATACGCACT+AGG - chr4_4:2564483-2564502 Msa0663650:intron 40.0%
CGCACTAGGAATTGTATGAT+TGG - chr4_4:2564497-2564516 Msa0663650:intron 40.0%
CTCATATGTACCGAAGATAC+TGG - chr4_4:2564525-2564544 Msa0663650:intron 40.0%
GGCATAGTTACCAGTATCTT+CGG + chr4_4:2564538-2564557 None:intergenic 40.0%
ATAGCAATGCAAGCAAAGGA+AGG + chr4_4:2564691-2564710 None:intergenic 40.0%
GAAGACAACAACCTGACAAA+AGG + chr4_4:2565038-2565057 None:intergenic 40.0%
! TTTGTCAGGTTGTTGTCTTC+TGG - chr4_4:2565038-2565057 Msa0663650:intron 40.0%
AACTACTATTATCCCTCGAG+CGG - chr4_4:2565061-2565080 Msa0663650:intron 40.0%
TAGAGATGAACTATGGGTCT+TGG + chr4_4:2565161-2565180 None:intergenic 40.0%
! CTTTTATGTGGATATCAGGG+TGG - chr4_4:2565231-2565250 Msa0663650:intron 40.0%
! ACTGTGGTGGAGATAACTTT+CGG - chr4_4:2565324-2565343 Msa0663650:intron 40.0%
TGGAGATAACTTTCGGTGAT+CGG - chr4_4:2565331-2565350 Msa0663650:intron 40.0%
CTTAGGCCTCAATGTTGTTA+AGG - chr4_4:2565476-2565495 Msa0663650:intron 40.0%
ACCGAGTATCTCTTCAGTTT+AGG - chr4_4:2565685-2565704 Msa0663650:intron 40.0%
GCCTAAACTGAAGAGATACT+CGG + chr4_4:2565689-2565708 None:intergenic 40.0%
!!! ACAGGGCTTTTTAGAGTAGA+TGG + chr4_4:2565812-2565831 None:intergenic 40.0%
! CTACTCTAAAAAGCCCTGTT+TGG - chr4_4:2565813-2565832 Msa0663650:CDS 40.0%
CGCATAAAGAAAGGCCTATT+TGG + chr4_4:2566074-2566093 None:intergenic 40.0%
!! TGAAACTTGTTGCGCAACTT+AGG - chr4_4:2566186-2566205 Msa0663650:intron 40.0%
TAGTAATTCCTTGGGTATGC+TGG - chr4_4:2566265-2566284 Msa0663650:intron 40.0%
!! ACTCTGGATCTTCCACTTTT+CGG + chr4_4:2566315-2566334 None:intergenic 40.0%
!! GATAGTTGGTAAAGCATACC+GGG + chr4_4:2566387-2566406 None:intergenic 40.0%
!! GGATAGTTGGTAAAGCATAC+CGG + chr4_4:2566388-2566407 None:intergenic 40.0%
CAATGAGAAAGGAGGATAGT+TGG + chr4_4:2566401-2566420 None:intergenic 40.0%
CAACTATCCTCCTTTCTCAT+TGG - chr4_4:2566399-2566418 Msa0663650:intron 40.0%
TATCCTCCTTTCTCATTGGA+GGG - chr4_4:2566403-2566422 Msa0663650:intron 40.0%
AAATCACCCTCCAATGAGAA+AGG + chr4_4:2566412-2566431 None:intergenic 40.0%
TTTCTCATTGGAGGGTGATT+TGG - chr4_4:2566411-2566430 Msa0663650:intron 40.0%
! AGATTCATCACCTGCTCTTT+TGG + chr4_4:2566552-2566571 None:intergenic 40.0%
ACAAGATCGACAAGTAATCC+AGG + chr4_4:2567141-2567160 None:intergenic 40.0%
ATCTGGAGAATTTGACACTG+AGG - chr4_4:2567194-2567213 Msa0663650:intron 40.0%
! AAACCTTCTAAGTTCTGACG+TGG - chr4_4:2567260-2567279 Msa0663650:intron 40.0%
GCTCATAATCGCTGATAAGA+GGG - chr4_4:2567319-2567338 Msa0663650:intron 40.0%
GCGTGGCTTATTCATTTGTT+GGG - chr4_4:2567391-2567410 Msa0663650:intron 40.0%
TTACGGATAAGCTTGTGAAC+TGG - chr4_4:2567466-2567485 Msa0663650:intron 40.0%
ATTAAAGTTACCTGCTGCAG+GGG + chr4_4:2567753-2567772 None:intergenic 40.0%
GATTAAAGTTACCTGCTGCA+GGG + chr4_4:2567754-2567773 None:intergenic 40.0%
AGATTAAAGTTACCTGCTGC+AGG + chr4_4:2567755-2567774 None:intergenic 40.0%
GTACATTGAAGTAGGCAAGT+AGG - chr4_4:2568077-2568096 Msa0663650:intron 40.0%
! CTGAGGAATCCAGTTTTTGA+AGG - chr4_4:2568233-2568252 Msa0663650:CDS 40.0%
AAGAGATGCCCTTCAAAAAC+TGG + chr4_4:2568245-2568264 None:intergenic 40.0%
! TTTGGAGTATAACACCACCA+TGG - chr4_4:2568300-2568319 Msa0663650:CDS 40.0%
AGTATAACACCACCATGGAT+TGG - chr4_4:2568305-2568324 Msa0663650:CDS 40.0%
AAACATTCACCAATCCATGG+TGG + chr4_4:2568317-2568336 None:intergenic 40.0%
TGCAAACATTCACCAATCCA+TGG + chr4_4:2568320-2568339 None:intergenic 40.0%
GCATTCATTGTTTCATTGGG+AGG - chr4_4:2568337-2568356 Msa0663650:CDS 40.0%
!! GAGGGCATGAATGAAAGTTT+TGG - chr4_4:2568566-2568585 Msa0663650:five_prime_UTR 40.0%
CTCCAGTTATTGAAAAGTGG+TGG + chr4_4:2568592-2568611 None:intergenic 40.0%
!! GCTTCATTAACTCTAGGACT+TGG + chr4_4:2568618-2568637 None:intergenic 40.0%
!! GCTATGAGTGCTTTGAGACT+TGG - chr4_4:2563768-2563787 Msa0663650:three_prime_UTR 45.0%
AAGTCATATACCACTGGGTG+GGG + chr4_4:2564578-2564597 None:intergenic 45.0%
CAAGTCATATACCACTGGGT+GGG + chr4_4:2564579-2564598 None:intergenic 45.0%
ACAAGTCATATACCACTGGG+TGG + chr4_4:2564580-2564599 None:intergenic 45.0%
! TTTTCATGAAGAACGCCTGC+AGG - chr4_4:2564823-2564842 Msa0663650:intron 45.0%
AGTACCTGCACATCAGTAAC+AGG + chr4_4:2565092-2565111 None:intergenic 45.0%
GTTACTGATGTGCAGGTACT+CGG - chr4_4:2565092-2565111 Msa0663650:intron 45.0%
! TGTCGACCGTGTTTGTTGAT+CGG - chr4_4:2565188-2565207 Msa0663650:intron 45.0%
GGATATCAGGGTGGAAATCA+AGG - chr4_4:2565240-2565259 Msa0663650:intron 45.0%
TATGACTATTGGGGTCGGAA+CGG + chr4_4:2565277-2565296 None:intergenic 45.0%
TTGCATCTGGATCCAAGTCT+TGG + chr4_4:2565305-2565324 None:intergenic 45.0%
ATAACTTTCGGTGATCGGCT+TGG - chr4_4:2565336-2565355 Msa0663650:intron 45.0%
TCTTCAGTTTAGGCCAGCAT+TGG - chr4_4:2565695-2565714 Msa0663650:intron 45.0%
TTTCAGTTGGGTTCCAATGC+TGG + chr4_4:2565711-2565730 None:intergenic 45.0%
AGCACAAGGAATGACTAGTG+CGG + chr4_4:2565773-2565792 None:intergenic 45.0%
! CAATTAGGAGCAAGAGCACA+AGG + chr4_4:2565787-2565806 None:intergenic 45.0%
!! GCTATTTTCATGAGCCATCG+TGG - chr4_4:2565956-2565975 Msa0663650:intron 45.0%
AGTCTGTTTCAGAGAGCCAA+TGG + chr4_4:2566011-2566030 None:intergenic 45.0%
TAATTCCTTGGGTATGCTGG+TGG - chr4_4:2566268-2566287 Msa0663650:intron 45.0%
! GGAGCTTTTTGCAGTGATAC+TGG - chr4_4:2566289-2566308 Msa0663650:intron 45.0%
GGAAGATCCAGAGTTGTTAG+AGG - chr4_4:2566321-2566340 Msa0663650:intron 45.0%
CGAATTGCCTCTAACAACTC+TGG + chr4_4:2566331-2566350 None:intergenic 45.0%
CTATCCTCCTTTCTCATTGG+AGG - chr4_4:2566402-2566421 Msa0663650:intron 45.0%
GAGAAGTGAGAATTGCCTGT+TGG + chr4_4:2566449-2566468 None:intergenic 45.0%
! TTAGCAATGGGAGCAGCTTT+TGG - chr4_4:2566516-2566535 Msa0663650:intron 45.0%
ACTTCTACCTCCAAAAGAGC+AGG - chr4_4:2566539-2566558 Msa0663650:intron 45.0%
! TTCATCACCTGCTCTTTTGG+AGG + chr4_4:2566549-2566568 None:intergenic 45.0%
CGAATGCATTACCTTCGATC+TGG + chr4_4:2566940-2566959 None:intergenic 45.0%
TCTATGTGGAGACAGCTGAT+CGG - chr4_4:2567115-2567134 Msa0663650:intron 45.0%
GGCTCATAATCGCTGATAAG+AGG - chr4_4:2567318-2567337 Msa0663650:intron 45.0%
!! TAATGAAAGCGCCTTCCGTT+TGG - chr4_4:2567368-2567387 Msa0663650:intron 45.0%
!! AATGAAAGCGCCTTCCGTTT+GGG - chr4_4:2567369-2567388 Msa0663650:intron 45.0%
ATGAATAAGCCACGCCCAAA+CGG + chr4_4:2567386-2567405 None:intergenic 45.0%
GGCGTGGCTTATTCATTTGT+TGG - chr4_4:2567390-2567409 Msa0663650:intron 45.0%
GGTTACAACTATGAGGGCTA+GGG - chr4_4:2567412-2567431 Msa0663650:intron 45.0%
GTTACAACTATGAGGGCTAG+GGG - chr4_4:2567413-2567432 Msa0663650:intron 45.0%
TTATCCGTAAACCGTAACGC+AGG + chr4_4:2567456-2567475 None:intergenic 45.0%
CACTAGATGCTTGCGCAATA+AGG + chr4_4:2568104-2568123 None:intergenic 45.0%
CTTATTGCGCAAGCATCTAG+TGG - chr4_4:2568102-2568121 Msa0663650:intron 45.0%
! GAGATATTTCTTGAGGCGTC+CGG - chr4_4:2568207-2568226 Msa0663650:intron 45.0%
AAACTGGATTCCTCAGTTGC+CGG + chr4_4:2568229-2568248 None:intergenic 45.0%
!! GGCCACCACTTTTCAATAAC+TGG - chr4_4:2568587-2568606 Msa0663650:five_prime_UTR 45.0%
AGCACCTGTTACTGATGTGC+AGG - chr4_4:2565085-2565104 Msa0663650:intron 50.0%
CTTGGATCCAGATGCAACTG+TGG - chr4_4:2565308-2565327 Msa0663650:intron 50.0%
ATCTCCACCACAGTTGCATC+TGG + chr4_4:2565318-2565337 None:intergenic 50.0%
GCACAAGGAATGACTAGTGC+GGG + chr4_4:2565772-2565791 None:intergenic 50.0%
CAGTGATACTGGCCGAAAAG+TGG - chr4_4:2566300-2566319 Msa0663650:intron 50.0%
TCACCCTCCAATGAGAAAGG+AGG + chr4_4:2566409-2566428 None:intergenic 50.0%
CCTTCGATCTGGACCATCAT+CGG + chr4_4:2566929-2566948 None:intergenic 50.0%
TGGCCACGTCAGAACTTAGA+AGG + chr4_4:2567266-2567285 None:intergenic 50.0%
GGGTTACAACTATGAGGGCT+AGG - chr4_4:2567411-2567430 Msa0663650:intron 50.0%
TGTTTGAACCTAGGGGCTCT+TGG - chr4_4:2567680-2567699 Msa0663650:intron 50.0%
GTTGGCAAGAACCTGCAACA+TGG + chr4_4:2568182-2568201 None:intergenic 50.0%
!! GGGGTTGGCTACATGGATCA+GGG + chr4_4:2564559-2564578 None:intergenic 55.0%
!! TGGGGTTGGCTACATGGATC+AGG + chr4_4:2564560-2564579 None:intergenic 55.0%
CATATACCACTGGGTGGGGT+TGG + chr4_4:2564574-2564593 None:intergenic 55.0%
TGAAGAACGCCTGCAGGACA+CGG - chr4_4:2564829-2564848 Msa0663650:intron 55.0%
ACACCAAATCCGTGTCCTGC+AGG + chr4_4:2564841-2564860 None:intergenic 55.0%
GGATCCAGATGCAACTGTGG+TGG - chr4_4:2565311-2565330 Msa0663650:intron 55.0%
AAGCTCCACCAGCATACCCA+AGG + chr4_4:2566276-2566295 None:intergenic 55.0%
! CCGATGATGGTCCAGATCGA+AGG - chr4_4:2566926-2566945 Msa0663650:intron 55.0%
ATAAGCCACGCCCAAACGGA+AGG + chr4_4:2567382-2567401 None:intergenic 55.0%
AACTATGAGGGCTAGGGGTG+AGG - chr4_4:2567418-2567437 Msa0663650:intron 55.0%
ACTATGAGGGCTAGGGGTGA+GGG - chr4_4:2567419-2567438 Msa0663650:intron 55.0%
GCCACCTGCGTTACGGTTTA+CGG - chr4_4:2567449-2567468 Msa0663650:intron 55.0%
TCCGTAAACCGTAACGCAGG+TGG + chr4_4:2567453-2567472 None:intergenic 55.0%
TGCTTTAGCCAAGAGCCCCT+AGG + chr4_4:2567691-2567710 None:intergenic 55.0%
!! ACTGGGTGGGGTTGGCTACA+TGG + chr4_4:2564566-2564585 None:intergenic 60.0%
ATGTAGCCAACCCCACCCAG+TGG - chr4_4:2564565-2564584 Msa0663650:intron 60.0%
ACGCCTGCAGGACACGGATT+TGG - chr4_4:2564835-2564854 Msa0663650:intron 60.0%
! TAACAGGTGCTGCCGCTCGA+GGG + chr4_4:2565076-2565095 None:intergenic 60.0%
GAATGACTAGTGCGGGCCAG+TGG + chr4_4:2565765-2565784 None:intergenic 60.0%
CTATGAGGGCTAGGGGTGAG+GGG - chr4_4:2567420-2567439 Msa0663650:intron 60.0%
TATGAGGGCTAGGGGTGAGG+GGG - chr4_4:2567421-2567440 Msa0663650:intron 60.0%
AATCAGCAAGCCCCTGCAGC+AGG - chr4_4:2567740-2567759 Msa0663650:intron 60.0%
! GTAACAGGTGCTGCCGCTCG+AGG + chr4_4:2565077-2565096 None:intergenic 65.0%
TGACTAGTGCGGGCCAGTGG+TGG + chr4_4:2565762-2565781 None:intergenic 65.0%
GTGGAGACAGCTGATCGGCC+TGG - chr4_4:2567120-2567139 Msa0663650:intron 65.0%
AAGCGCCTTCCGTTTGGGCG+TGG - chr4_4:2567374-2567393 Msa0663650:intron 65.0%
ATGAGGGCTAGGGGTGAGGG+GGG - chr4_4:2567422-2567441 Msa0663650:intron 65.0%
GGGCTTCGCCACCTGCGTTA+CGG - chr4_4:2567442-2567461 Msa0663650:intron 65.0%
! CTTGAGGCGTCCGGCAACTG+AGG - chr4_4:2568216-2568235 Msa0663650:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 2563506 2568639 2563506 ID=Msa0663650;Name=Msa0663650
chr4_4 mRNA 2563506 2568639 2563506 ID=Msa0663650-mRNA-1;Parent=Msa0663650;Name=Msa0663650-mRNA-1;_AED=0.07;_eAED=0.07;_QI=259|0.87|0.88|1|0.87|0.88|9|387|267
chr4_4 exon 2563506 2563955 2563506 ID=Msa0663650-mRNA-1:exon:712;Parent=Msa0663650-mRNA-1
chr4_4 exon 2564384 2564452 2564384 ID=Msa0663650-mRNA-1:exon:711;Parent=Msa0663650-mRNA-1
chr4_4 exon 2564930 2565019 2564930 ID=Msa0663650-mRNA-1:exon:710;Parent=Msa0663650-mRNA-1
chr4_4 exon 2565585 2565644 2565585 ID=Msa0663650-mRNA-1:exon:709;Parent=Msa0663650-mRNA-1
chr4_4 exon 2565758 2565842 2565758 ID=Msa0663650-mRNA-1:exon:708;Parent=Msa0663650-mRNA-1
chr4_4 exon 2566592 2566686 2566592 ID=Msa0663650-mRNA-1:exon:707;Parent=Msa0663650-mRNA-1
chr4_4 exon 2566771 2566896 2566771 ID=Msa0663650-mRNA-1:exon:706;Parent=Msa0663650-mRNA-1
chr4_4 exon 2567039 2567099 2567039 ID=Msa0663650-mRNA-1:exon:705;Parent=Msa0663650-mRNA-1
chr4_4 exon 2568226 2568639 2568226 ID=Msa0663650-mRNA-1:exon:704;Parent=Msa0663650-mRNA-1
chr4_4 five_prime_UTR 2568381 2568639 2568381 ID=Msa0663650-mRNA-1:five_prime_utr;Parent=Msa0663650-mRNA-1
chr4_4 CDS 2568226 2568380 2568226 ID=Msa0663650-mRNA-1:cds;Parent=Msa0663650-mRNA-1
chr4_4 CDS 2567039 2567099 2567039 ID=Msa0663650-mRNA-1:cds;Parent=Msa0663650-mRNA-1
chr4_4 CDS 2566771 2566896 2566771 ID=Msa0663650-mRNA-1:cds;Parent=Msa0663650-mRNA-1
chr4_4 CDS 2566592 2566686 2566592 ID=Msa0663650-mRNA-1:cds;Parent=Msa0663650-mRNA-1
chr4_4 CDS 2565758 2565842 2565758 ID=Msa0663650-mRNA-1:cds;Parent=Msa0663650-mRNA-1
chr4_4 CDS 2565585 2565644 2565585 ID=Msa0663650-mRNA-1:cds;Parent=Msa0663650-mRNA-1
chr4_4 CDS 2564930 2565019 2564930 ID=Msa0663650-mRNA-1:cds;Parent=Msa0663650-mRNA-1
chr4_4 CDS 2564384 2564452 2564384 ID=Msa0663650-mRNA-1:cds;Parent=Msa0663650-mRNA-1
chr4_4 CDS 2563893 2563955 2563893 ID=Msa0663650-mRNA-1:cds;Parent=Msa0663650-mRNA-1
chr4_4 three_prime_UTR 2563506 2563892 2563506 ID=Msa0663650-mRNA-1:three_prime_utr;Parent=Msa0663650-mRNA-1
Gene Sequence

>Msa0663650

ATGGCTATGAGTGCTTTGAGACTTGGATTTCACTTCAGTGCTGCTACTGATAATAGTTTGAGAGTTTTGGAAAAACCCATTTTCTGTGTCCCTTTTTTGAATGCTTCTTCTGGCTTTGTTTCTACTAAGCCATGTTACTTTCTTCACAAAAGAAGGTTGTTGTCTTCTGGAACTACTATTATCCCTCGAGCGGCAGCACCTGTTACTGATGTGCAGGGTGGAAATCAAGGTGAGACTGATACCGTTCCGACCCCAATAGTCATAATTGACCAAGACTTGGATCCAGATGCAACTGTGGTGGAGATAACTTTCGGTGATCGGCTTGGAGCTCTTCTTGACACAATGAGTGCATTAAAAGACTTAGGCCTCAATGTTGTTAAGGCAAATGTTTTTCTGGATTCTTCTGGCAAGCACAACAAGTTTTCCATCACAAAAGCTGATACTGGCCGAAAAGTGGAAGATCCAGAGTTGTTAGAGGCAATTCGTTTGACAATTATAAATAATCTGATTCAGTATCACCCGGAATCAAGTTCTCAGTTAGCAATGGGAGCAGCTTTTGGACTTCTACCTCCAAAAGAGCAGACAGCTGATCGGCCTGGATTACTTGTCGATCTTGTAAAAAGTATTACTGACATTGACATTGCTGTTGAATCTGGAGAATTTGACACTGAGGGGCTCTTGGCTAAAGCAAAGTTTCATGTTAGCTACAAAGGCAAAGCAATCAGCAAGCCCCTGCAGCAGGTTCTTGCCAACAGCTTGAGATATTTCTTGAGGCGTCCGGCAACTGAGGAATCCAGTTTTTGA

Protein sequence

>Msa0663650

MAMSALRLGFHFSAATDNSLRVLEKPIFCVPFLNASSGFVSTKPCYFLHKRRLLSSGTTIIPRAAAPVTDVQGGNQGETDTVPTPIVIIDQDLDPDATVVEITFGDRLGALLDTMSALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPKEQTADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKAKFHVSYKGKAISKPLQQVLANSLRYFLRRPATEESSF*