Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356180 | XP_013459315.1 | 73.377 | 154 | 41 | 0 | 1 | 154 | 1 | 154 | 5.69e-78 | 238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356180 | sp|P62929|ALB1D_PEA | 54.098 | 122 | 49 | 4 | 1 | 122 | 1 | 115 | 1.95e-34 | 120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356180 | I3T793 | 73.377 | 154 | 41 | 0 | 1 | 154 | 1 | 154 | 2.72e-78 | 238 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011010 | Msa0356180 | 0.803888 | 2.811559e-49 | -8.615850e-47 |
| Msa0013270 | Msa0356180 | 0.802681 | 4.998584e-49 | -8.615850e-47 |
| Msa0021870 | Msa0356180 | 0.807195 | 5.690737e-50 | -8.615850e-47 |
| Msa0024650 | Msa0356180 | 0.829337 | 5.447991e-55 | -8.615850e-47 |
| Msa0025570 | Msa0356180 | 0.867190 | 1.642519e-65 | -8.615850e-47 |
| Msa0038150 | Msa0356180 | -0.803714 | 3.055204e-49 | -8.615850e-47 |
| Msa0047560 | Msa0356180 | -0.807370 | 5.225008e-50 | -8.615850e-47 |
| Msa0048380 | Msa0356180 | 0.803409 | 3.535168e-49 | -8.615850e-47 |
| Msa0060410 | Msa0356180 | 0.833853 | 4.201809e-56 | -8.615850e-47 |
| Msa0073110 | Msa0356180 | 0.866027 | 3.847900e-65 | -8.615850e-47 |
| Msa0078170 | Msa0356180 | -0.802076 | 6.661103e-49 | -8.615850e-47 |
| Msa0080620 | Msa0356180 | -0.810712 | 1.005530e-50 | -8.615850e-47 |
| Msa0106540 | Msa0356180 | 0.810114 | 1.354128e-50 | -8.615850e-47 |
| Msa0117650 | Msa0356180 | 0.806795 | 6.915162e-50 | -8.615850e-47 |
| Msa0121320 | Msa0356180 | 0.831176 | 1.936132e-55 | -8.615850e-47 |
| Msa0136180 | Msa0356180 | -0.819102 | 1.385210e-52 | -8.615850e-47 |
| Msa0137010 | Msa0356180 | -0.814306 | 1.647555e-51 | -8.615850e-47 |
| Msa0163690 | Msa0356180 | 0.825365 | 4.878406e-54 | -8.615850e-47 |
| Msa0166180 | Msa0356180 | 0.822854 | 1.895691e-53 | -8.615850e-47 |
| Msa0186510 | Msa0356180 | -0.810319 | 1.222911e-50 | -8.615850e-47 |
| Msa0189150 | Msa0356180 | -0.815292 | 9.959692e-52 | -8.615850e-47 |
| Msa0211460 | Msa0356180 | 0.803656 | 3.141657e-49 | -8.615850e-47 |
| Msa0244310 | Msa0356180 | 0.819759 | 9.808908e-53 | -8.615850e-47 |
| Msa0248320 | Msa0356180 | 0.820863 | 5.476670e-53 | -8.615850e-47 |
| Msa0258010 | Msa0356180 | 0.815806 | 7.652686e-52 | -8.615850e-47 |
| Msa0258260 | Msa0356180 | 0.816887 | 4.386661e-52 | -8.615850e-47 |
| Msa0267450 | Msa0356180 | -0.811427 | 7.039069e-51 | -8.615850e-47 |
| Msa0267510 | Msa0356180 | -0.816217 | 6.197918e-52 | -8.615850e-47 |
| Msa0267710 | Msa0356180 | 0.812096 | 5.034302e-51 | -8.615850e-47 |
| Msa0270730 | Msa0356180 | -0.802623 | 5.139633e-49 | -8.615850e-47 |
| Msa0279810 | Msa0356180 | 0.811592 | 6.481765e-51 | -8.615850e-47 |
| Msa0282830 | Msa0356180 | 0.834773 | 2.469259e-56 | -8.615850e-47 |
| Msa0286360 | Msa0356180 | 0.810885 | 9.228653e-51 | -8.615850e-47 |
| Msa0303900 | Msa0356180 | 0.801607 | 8.313241e-49 | -8.615850e-47 |
| Msa0307630 | Msa0356180 | 0.805390 | 1.366313e-49 | -8.615850e-47 |
| Msa0311540 | Msa0356180 | 0.809634 | 1.717449e-50 | -8.615850e-47 |
| Msa0314680 | Msa0356180 | -0.810834 | 9.462843e-51 | -8.615850e-47 |
| Msa0319220 | Msa0356180 | 0.805284 | 1.437730e-49 | -8.615850e-47 |
| Msa0321240 | Msa0356180 | 0.813167 | 2.935025e-51 | -8.615850e-47 |
| Msa0333770 | Msa0356180 | 0.801929 | 7.141125e-49 | -8.615850e-47 |
| Msa0335340 | Msa0356180 | 0.833198 | 6.121309e-56 | -8.615850e-47 |
| Msa0336460 | Msa0356180 | 0.824717 | 6.937525e-54 | -8.615850e-47 |
| Msa0354600 | Msa0356180 | 0.826961 | 2.035625e-54 | -8.615850e-47 |
| Msa0356180 | Msa0356200 | 0.809719 | 1.646392e-50 | -8.615850e-47 |
| Msa0356180 | Msa0356240 | 0.882228 | 1.241904e-70 | -8.615850e-47 |
| Msa0356180 | Msa0356250 | 0.817586 | 3.053600e-52 | -8.615850e-47 |
| Msa0356180 | Msa0356270 | 0.913880 | 3.680258e-84 | -8.615850e-47 |
| Msa0356180 | Msa0356320 | 0.870572 | 1.318979e-66 | -8.615850e-47 |
| Msa0356180 | Msa0356360 | 0.996260 | 2.594160e-225 | -8.615850e-47 |
| Msa0356180 | Msa0356380 | 0.811085 | 8.349507e-51 | -8.615850e-47 |
| Msa0356180 | Msa0356410 | 0.817961 | 2.513711e-52 | -8.615850e-47 |
| Msa0356180 | Msa0357470 | 0.806602 | 7.597563e-50 | -8.615850e-47 |
| Msa0356180 | Msa0357530 | 0.803533 | 3.330724e-49 | -8.615850e-47 |
| Msa0356180 | Msa0364030 | -0.813019 | 3.163552e-51 | -8.615850e-47 |
| Msa0356180 | Msa0364910 | -0.829438 | 5.147995e-55 | -8.615850e-47 |
| Msa0356180 | Msa0375570 | -0.802549 | 5.323394e-49 | -8.615850e-47 |
| Msa0356180 | Msa0385770 | -0.809994 | 1.436939e-50 | -8.615850e-47 |
| Msa0356180 | Msa0386230 | -0.806278 | 8.888299e-50 | -8.615850e-47 |
| Msa0356180 | Msa0403740 | -0.810111 | 1.356080e-50 | -8.615850e-47 |
| Msa0356180 | Msa0412580 | -0.801108 | 1.051995e-48 | -8.615850e-47 |
| Msa0356180 | Msa0424220 | -0.802333 | 5.896759e-49 | -8.615850e-47 |
| Msa0356180 | Msa0449290 | 0.947059 | 1.401998e-105 | -8.615850e-47 |
| Msa0356180 | Msa0449360 | 0.867284 | 1.532456e-65 | -8.615850e-47 |
| Msa0356180 | Msa0449380 | 0.876176 | 1.719505e-68 | -8.615850e-47 |
| Msa0356180 | Msa0449940 | 0.880920 | 3.688200e-70 | -8.615850e-47 |
| Msa0356180 | Msa0454770 | 0.802442 | 5.600072e-49 | -8.615850e-47 |
| Msa0356180 | Msa0456450 | -0.800789 | 1.222150e-48 | -8.615850e-47 |
| Msa0356180 | Msa0457070 | -0.804387 | 2.213970e-49 | -8.615850e-47 |
| Msa0356180 | Msa0469770 | -0.816004 | 6.912861e-52 | -8.615850e-47 |
| Msa0356180 | Msa0471130 | -0.819762 | 9.794680e-53 | -8.615850e-47 |
| Msa0356180 | Msa0480900 | -0.800624 | 1.320454e-48 | -8.615850e-47 |
| Msa0356180 | Msa0481670 | 0.802090 | 6.616487e-49 | -8.615850e-47 |
| Msa0356180 | Msa0506700 | -0.802216 | 6.231949e-49 | -8.615850e-47 |
| Msa0356180 | Msa0525180 | -0.805122 | 1.554787e-49 | -8.615850e-47 |
| Msa0356180 | Msa0540640 | 0.832063 | 1.170407e-55 | -8.615850e-47 |
| Msa0356180 | Msa0547370 | 0.829707 | 4.427032e-55 | -8.615850e-47 |
| Msa0356180 | Msa0548260 | -0.812920 | 3.325521e-51 | -8.615850e-47 |
| Msa0356180 | Msa0549970 | 0.813293 | 2.754767e-51 | -8.615850e-47 |
| Msa0356180 | Msa0550800 | -0.801967 | 7.011145e-49 | -8.615850e-47 |
| Msa0356180 | Msa0565370 | -0.807192 | 5.699398e-50 | -8.615850e-47 |
| Msa0356180 | Msa0565430 | -0.816969 | 4.203262e-52 | -8.615850e-47 |
| Msa0356180 | Msa0566090 | -0.805175 | 1.515187e-49 | -8.615850e-47 |
| Msa0356180 | Msa0566280 | 0.815646 | 8.308101e-52 | -8.615850e-47 |
| Msa0356180 | Msa0567330 | 0.846715 | 1.824302e-59 | -8.615850e-47 |
| Msa0356180 | Msa0567570 | 0.839809 | 1.269184e-57 | -8.615850e-47 |
| Msa0356180 | Msa0576320 | 0.837995 | 3.740636e-57 | -8.615850e-47 |
| Msa0356180 | Msa0587710 | 0.823552 | 1.302451e-53 | -8.615850e-47 |
| Msa0356180 | Msa0587730 | 0.802102 | 6.579005e-49 | -8.615850e-47 |
| Msa0356180 | Msa0590620 | -0.827881 | 1.224372e-54 | -8.615850e-47 |
| Msa0356180 | Msa0597800 | 0.810032 | 1.410217e-50 | -8.615850e-47 |
| Msa0356180 | Msa0597820 | 0.809345 | 1.981081e-50 | -8.615850e-47 |
| Msa0356180 | Msa0602100 | 0.804663 | 1.938812e-49 | -8.615850e-47 |
| Msa0356180 | Msa0603180 | -0.817275 | 3.587729e-52 | -8.615850e-47 |
| Msa0356180 | Msa0603310 | 0.806383 | 8.449452e-50 | -8.615850e-47 |
| Msa0356180 | Msa0604280 | 0.805610 | 1.228559e-49 | -8.615850e-47 |
| Msa0356180 | Msa0605480 | 0.812957 | 3.263924e-51 | -8.615850e-47 |
| Msa0356180 | Msa0638300 | -0.808334 | 3.260073e-50 | -8.615850e-47 |
| Msa0356180 | Msa0644340 | 0.800763 | 1.237358e-48 | -8.615850e-47 |
| Msa0356180 | Msa0645370 | 0.801230 | 9.929680e-49 | -8.615850e-47 |
| Msa0356180 | Msa0646440 | 0.810870 | 9.295061e-51 | -8.615850e-47 |
| Msa0356180 | Msa0647300 | 0.803310 | 3.705686e-49 | -8.615850e-47 |
| Msa0356180 | Msa0657710 | 0.818039 | 2.412794e-52 | -8.615850e-47 |
| Msa0356180 | Msa0659230 | 0.822551 | 2.229819e-53 | -8.615850e-47 |
| Msa0356180 | Msa0673620 | -0.818382 | 2.018006e-52 | -8.615850e-47 |
| Msa0356180 | Msa0676570 | -0.800409 | 1.461180e-48 | -8.615850e-47 |
| Msa0356180 | Msa0680460 | 0.828671 | 7.896168e-55 | -8.615850e-47 |
| Msa0356180 | Msa0682910 | 0.838537 | 2.711707e-57 | -8.615850e-47 |
| Msa0356180 | Msa0686830 | 0.806273 | 8.912512e-50 | -8.615850e-47 |
| Msa0356180 | Msa0702800 | 0.818330 | 2.073455e-52 | -8.615850e-47 |
| Msa0356180 | Msa0707330 | 0.808911 | 2.454095e-50 | -8.615850e-47 |
| Msa0356180 | Msa0714230 | -0.803170 | 3.961515e-49 | -8.615850e-47 |
| Msa0356180 | Msa0716000 | 0.805347 | 1.394805e-49 | -8.615850e-47 |
| Msa0356180 | Msa0716980 | 0.808358 | 3.221225e-50 | -8.615850e-47 |
| Msa0356180 | Msa0742370 | -0.805967 | 1.033431e-49 | -8.615850e-47 |
| Msa0356180 | Msa0756670 | -0.805496 | 1.297735e-49 | -8.615850e-47 |
| Msa0356180 | Msa0758880 | -0.813565 | 2.400385e-51 | -8.615850e-47 |
| Msa0356180 | Msa0763370 | 0.801493 | 8.774993e-49 | -8.615850e-47 |
| Msa0356180 | Msa0776590 | -0.809857 | 1.537969e-50 | -8.615850e-47 |
| Msa0356180 | Msa0792410 | 0.804640 | 1.960191e-49 | -8.615850e-47 |
| Msa0356180 | Msa0800120 | 0.812981 | 3.225189e-51 | -8.615850e-47 |
| Msa0356180 | Msa0801920 | -0.819167 | 1.339004e-52 | -8.615850e-47 |
| Msa0356180 | Msa0823480 | -0.815623 | 8.410221e-52 | -8.615850e-47 |
| Msa0356180 | Msa0827340 | -0.801301 | 9.604617e-49 | -8.615850e-47 |
| Msa0356180 | Msa0828960 | 0.816063 | 6.708955e-52 | -8.615850e-47 |
| Msa0356180 | Msa0833360 | -0.800240 | 1.581548e-48 | -8.615850e-47 |
| Msa0356180 | Msa0836060 | -0.800839 | 1.193844e-48 | -8.615850e-47 |
| Msa0356180 | Msa0838120 | -0.820803 | 5.654930e-53 | -8.615850e-47 |
| Msa0356180 | Msa0838210 | 0.803779 | 2.962103e-49 | -8.615850e-47 |
| Msa0356180 | Msa0841930 | 0.801971 | 7.000847e-49 | -8.615850e-47 |
| Msa0356180 | Msa0851760 | 0.813292 | 2.755573e-51 | -8.615850e-47 |
| Msa0356180 | Msa0896920 | 0.820404 | 6.985134e-53 | -8.615850e-47 |
| Msa0356180 | Msa0909260 | 0.831793 | 1.364966e-55 | -8.615850e-47 |
| Msa0356180 | Msa0910170 | 0.837697 | 4.461824e-57 | -8.615850e-47 |
| Msa0356180 | Msa0964400 | -0.815017 | 1.146638e-51 | -8.615850e-47 |
| Msa0356180 | Msa0964510 | 0.800912 | 1.153720e-48 | -8.615850e-47 |
| Msa0356180 | Msa0970270 | 0.801442 | 8.985653e-49 | -8.615850e-47 |
| Msa0356180 | Msa1005370 | 0.814871 | 1.235633e-51 | -8.615850e-47 |
| Msa0356180 | Msa1015360 | 0.803947 | 2.733120e-49 | -8.615850e-47 |
| Msa0356180 | Msa1024480 | 0.822284 | 2.571633e-53 | -8.615850e-47 |
| Msa0356180 | Msa1029820 | 0.805132 | 1.547435e-49 | -8.615850e-47 |
| Msa0356180 | Msa1029840 | 0.824031 | 1.006037e-53 | -8.615850e-47 |
| Msa0356180 | Msa1029860 | 0.806419 | 8.302609e-50 | -8.615850e-47 |
| Msa0356180 | Msa1041910 | 0.814742 | 1.319494e-51 | -8.615850e-47 |
| Msa0356180 | Msa1062290 | 0.805642 | 1.209405e-49 | -8.615850e-47 |
| Msa0356180 | Msa1070630 | -0.800670 | 1.292576e-48 | -8.615850e-47 |
| Msa0356180 | Msa1074560 | 0.800963 | 1.125956e-48 | -8.615850e-47 |
| Msa0356180 | Msa1076280 | 0.814667 | 1.370997e-51 | -8.615850e-47 |
| Msa0356180 | Msa1088740 | -0.828562 | 8.392861e-55 | -8.615850e-47 |
| Msa0356180 | Msa1094810 | 0.807470 | 4.975253e-50 | -8.615850e-47 |
| Msa0356180 | Msa1103450 | 0.832880 | 7.343829e-56 | -8.615850e-47 |
| Msa0356180 | Msa1108560 | 0.800096 | 1.692009e-48 | -8.615850e-47 |
| Msa0356180 | Msa1111910 | 0.817348 | 3.455703e-52 | -8.615850e-47 |
| Msa0356180 | Msa1123730 | 0.812063 | 5.119078e-51 | -8.615850e-47 |
| Msa0356180 | Msa1129880 | -0.803611 | 3.209052e-49 | -8.615850e-47 |
| Msa0356180 | Msa1132880 | -0.801557 | 8.510484e-49 | -8.615850e-47 |
| Msa0356180 | Msa1133440 | -0.806163 | 9.400422e-50 | -8.615850e-47 |
| Msa0356180 | Msa1140930 | 0.801114 | 1.049162e-48 | -8.615850e-47 |
| Msa0356180 | Msa1145430 | -0.808165 | 3.541049e-50 | -8.615850e-47 |
| Msa0356180 | Msa1147010 | 0.840393 | 8.934107e-58 | -8.615850e-47 |
| Msa0356180 | Msa1154060 | 0.809342 | 1.983949e-50 | -8.615850e-47 |
| Msa0356180 | Msa1154320 | 0.810412 | 1.167876e-50 | -8.615850e-47 |
| Msa0356180 | Msa1158450 | -0.803553 | 3.300209e-49 | -8.615850e-47 |
| Msa0356180 | Msa1160540 | 0.807213 | 5.640363e-50 | -8.615850e-47 |
| Msa0356180 | Msa1165460 | 0.805294 | 1.430895e-49 | -8.615850e-47 |
| Msa0356180 | Msa1167960 | 0.811000 | 8.711696e-51 | -8.615850e-47 |
| Msa0356180 | Msa1169870 | 0.802611 | 5.168792e-49 | -8.615850e-47 |
| Msa0356180 | Msa1184680 | 0.812531 | 4.045837e-51 | -8.615850e-47 |
| Msa0356180 | Msa1190350 | -0.808346 | 3.239788e-50 | -8.615850e-47 |
| Msa0356180 | Msa1191270 | 0.805210 | 1.489830e-49 | -8.615850e-47 |
| Msa0356180 | Msa1199540 | -0.804674 | 1.928803e-49 | -8.615850e-47 |
| Msa0356180 | Msa1203650 | 0.830245 | 3.274134e-55 | -8.615850e-47 |
| Msa0356180 | Msa1215540 | -0.802256 | 6.116807e-49 | -8.615850e-47 |
| Msa0356180 | Msa1221270 | 0.807170 | 5.762225e-50 | -8.615850e-47 |
| Msa0356180 | Msa1223710 | 0.846626 | 1.930210e-59 | -8.615850e-47 |
| Msa0356180 | Msa1223990 | 0.832562 | 8.808920e-56 | -8.615850e-47 |
| Msa0356180 | Msa1242130 | 0.800233 | 1.586812e-48 | -8.615850e-47 |
| Msa0356180 | Msa1242160 | 0.819339 | 1.223415e-52 | -8.615850e-47 |
| Msa0356180 | Msa1250610 | 0.803334 | 3.662813e-49 | -8.615850e-47 |
| Msa0356180 | Msa1257860 | -0.800095 | 1.692424e-48 | -8.615850e-47 |
| Msa0356180 | Msa1263110 | 0.824919 | 6.217273e-54 | -8.615850e-47 |
| Msa0356180 | Msa1263120 | 0.811959 | 5.392703e-51 | -8.615850e-47 |
| Msa0356180 | Msa1263370 | 0.823874 | 1.094860e-53 | -8.615850e-47 |
| Msa0356180 | Msa1266120 | -0.814809 | 1.275252e-51 | -8.615850e-47 |
| Msa0356180 | Msa1268360 | 0.813922 | 2.003120e-51 | -8.615850e-47 |
| Msa0356180 | Msa1273320 | 0.850260 | 1.905469e-60 | -8.615850e-47 |
| Msa0356180 | Msa1279200 | -0.810458 | 1.141499e-50 | -8.615850e-47 |
| Msa0356180 | Msa1281780 | 0.825196 | 5.348504e-54 | -8.615850e-47 |
| Msa0356180 | Msa1283930 | 0.821513 | 3.880009e-53 | -8.615850e-47 |
| Msa0356180 | Msa1284020 | 0.832039 | 1.186886e-55 | -8.615850e-47 |
| Msa0356180 | Msa1286860 | -0.804324 | 2.282144e-49 | -8.615850e-47 |
| Msa0356180 | Msa1287100 | -0.808867 | 2.507396e-50 | -8.615850e-47 |
| Msa0356180 | Msa1291070 | -0.807129 | 5.877456e-50 | -8.615850e-47 |
| Msa0356180 | Msa1295210 | -0.809175 | 2.154767e-50 | -8.615850e-47 |
| Msa0356180 | Msa1295480 | -0.821684 | 3.542331e-53 | -8.615850e-47 |
| Msa0356180 | Msa1297220 | -0.803596 | 3.232486e-49 | -8.615850e-47 |
| Msa0356180 | Msa1301280 | -0.837163 | 6.111916e-57 | -8.615850e-47 |
| Msa0356180 | Msa1302630 | 0.831376 | 1.728923e-55 | -8.615850e-47 |
| Msa0356180 | Msa1321010 | 0.848555 | 5.688417e-60 | -8.615850e-47 |
| Msa0356180 | Msa1322960 | 0.837708 | 4.432044e-57 | -8.615850e-47 |
| Msa0356180 | Msa1323070 | 0.801406 | 9.139024e-49 | -8.615850e-47 |
| Msa0356180 | Msa1326640 | 0.803551 | 3.303078e-49 | -8.615850e-47 |
| Msa0356180 | Msa1326680 | 0.808952 | 2.405247e-50 | -8.615850e-47 |
| Msa0356180 | Msa1342360 | -0.801745 | 7.787510e-49 | -8.615850e-47 |
| Msa0356180 | Msa1361980 | 0.804655 | 1.946673e-49 | -8.615850e-47 |
| Msa0356180 | Msa1362520 | 0.824720 | 6.927732e-54 | -8.615850e-47 |
| Msa0356180 | Msa1379270 | -0.820563 | 6.419886e-53 | -8.615850e-47 |
| Msa0356180 | Msa1380740 | 0.825944 | 3.555690e-54 | -8.615850e-47 |
| Msa0356180 | Msa1400290 | -0.806592 | 7.633100e-50 | -8.615850e-47 |
| Msa0356180 | Msa1404810 | -0.803840 | 2.877035e-49 | -8.615850e-47 |
| Msa0356180 | Msa1405830 | 0.810113 | 1.354779e-50 | -8.615850e-47 |
| Msa0356180 | Msa1407810 | 0.847622 | 1.029387e-59 | -8.615850e-47 |
| Msa0356180 | Msa1417220 | 0.816195 | 6.267568e-52 | -8.615850e-47 |
| Msa0356180 | Msa1418840 | -0.808092 | 3.671088e-50 | -8.615850e-47 |
| Msa0356180 | Msa1424870 | 0.827244 | 1.740778e-54 | -8.615850e-47 |
| Msa0356180 | Msa1433040 | 0.800328 | 1.517509e-48 | -8.615850e-47 |
| Msa0356180 | Msa1433360 | 0.847041 | 1.485633e-59 | -8.615850e-47 |
| Msa0356180 | Msa1433570 | 0.821980 | 3.026106e-53 | -8.615850e-47 |
| Msa0356180 | Msa1436400 | 0.816203 | 6.242517e-52 | -8.615850e-47 |
| Msa0356180 | Msa1437780 | 0.849842 | 2.494096e-60 | -8.615850e-47 |
| Msa0356180 | Msa1445530 | 0.843037 | 1.792557e-58 | -8.615850e-47 |
| Msa0356180 | Msa1455360 | 0.812681 | 3.752169e-51 | -8.615850e-47 |
| Msa0356180 | Msa1461660 | 0.808520 | 2.975019e-50 | -8.615850e-47 |
| Msa0356180 | Msa1462610 | 0.804892 | 1.737109e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0356180 | MtrunA17_Chr3g0090571 | 73.377 | 154 | 41 | 0 | 1 | 154 | 1 | 154 | 5.23e-82 | 238 |
| Msa0356180 | MtrunA17_Chr7g0231991 | 55.556 | 135 | 53 | 3 | 23 | 154 | 2 | 132 | 2.96e-47 | 149 |
| Msa0356180 | MtrunA17_Chr7g0232011 | 52.258 | 155 | 63 | 6 | 1 | 154 | 1 | 145 | 1.00e-46 | 149 |
| Msa0356180 | MtrunA17_Chr6g0456951 | 49.333 | 150 | 57 | 6 | 1 | 148 | 1 | 133 | 3.21e-37 | 124 |
| Msa0356180 | MtrunA17_Chr3g0111281 | 46.154 | 156 | 60 | 5 | 1 | 150 | 1 | 138 | 1.42e-34 | 117 |
| Msa0356180 | MtrunA17_Chr7g0236791 | 47.656 | 128 | 62 | 3 | 1 | 127 | 1 | 124 | 5.18e-34 | 116 |
| Msa0356180 | MtrunA17_Chr3g0111131 | 48.507 | 134 | 60 | 3 | 1 | 132 | 1 | 127 | 5.47e-34 | 115 |
| Msa0356180 | MtrunA17_Chr3g0111111 | 42.581 | 155 | 67 | 6 | 1 | 150 | 1 | 138 | 3.16e-33 | 114 |
| Msa0356180 | MtrunA17_Chr7g0236801 | 49.231 | 130 | 58 | 6 | 1 | 127 | 1 | 125 | 5.01e-33 | 114 |
| Msa0356180 | MtrunA17_Chr6g0464071 | 45.033 | 151 | 63 | 6 | 1 | 150 | 1 | 132 | 2.02e-30 | 107 |
| Msa0356180 | MtrunA17_Chr3g0111071 | 45.255 | 137 | 67 | 5 | 1 | 136 | 1 | 130 | 8.66e-30 | 105 |
| Msa0356180 | MtrunA17_Chr8g0344771 | 56.383 | 94 | 38 | 3 | 36 | 128 | 11 | 102 | 9.56e-30 | 105 |
| Msa0356180 | MtrunA17_Chr6g0468621 | 44.805 | 154 | 64 | 8 | 1 | 153 | 1 | 134 | 1.15e-29 | 105 |
| Msa0356180 | MtrunA17_Chr3g0111261 | 45.223 | 157 | 56 | 6 | 1 | 150 | 1 | 134 | 1.34e-29 | 105 |
| Msa0356180 | MtrunA17_Chr6g0456991 | 58.696 | 92 | 35 | 3 | 37 | 127 | 16 | 105 | 1.50e-29 | 103 |
| Msa0356180 | MtrunA17_Chr8g0344791 | 54.455 | 101 | 43 | 3 | 37 | 136 | 12 | 110 | 2.14e-29 | 103 |
| Msa0356180 | MtrunA17_Chr8g0344801 | 52.778 | 108 | 37 | 4 | 42 | 148 | 1 | 95 | 8.41e-29 | 102 |
| Msa0356180 | MtrunA17_Chr8g0357331 | 55.556 | 81 | 36 | 0 | 74 | 154 | 21 | 101 | 3.33e-28 | 100 |
| Msa0356180 | MtrunA17_Chr3g0111351 | 40.714 | 140 | 73 | 5 | 1 | 137 | 9 | 141 | 7.10e-28 | 100 |
| Msa0356180 | MtrunA17_Chr6g0468601 | 41.558 | 154 | 72 | 6 | 1 | 153 | 1 | 137 | 3.47e-27 | 99.0 |
| Msa0356180 | MtrunA17_Chr3g0104571 | 39.241 | 158 | 68 | 6 | 1 | 152 | 1 | 136 | 6.19e-27 | 98.2 |
| Msa0356180 | MtrunA17_Chr3g0111241 | 44.715 | 123 | 56 | 3 | 1 | 119 | 1 | 115 | 7.59e-27 | 97.8 |
| Msa0356180 | MtrunA17_Chr3g0111081 | 43.066 | 137 | 70 | 5 | 1 | 136 | 1 | 130 | 5.58e-26 | 95.9 |
| Msa0356180 | MtrunA17_Chr3g0111191 | 41.463 | 123 | 61 | 4 | 1 | 118 | 1 | 117 | 8.47e-25 | 92.0 |
| Msa0356180 | MtrunA17_Chr1g0153591 | 44.355 | 124 | 52 | 6 | 1 | 124 | 1 | 107 | 2.23e-22 | 85.9 |
| Msa0356180 | MtrunA17_Chr4g0012121 | 41.139 | 158 | 76 | 5 | 1 | 154 | 1 | 145 | 2.51e-22 | 86.7 |
| Msa0356180 | MtrunA17_Chr3g0092701 | 66.129 | 62 | 21 | 0 | 1 | 62 | 1 | 62 | 2.97e-22 | 84.3 |
| Msa0356180 | MtrunA17_Chr3g0111221 | 46.512 | 86 | 45 | 1 | 49 | 134 | 23 | 107 | 1.95e-21 | 83.6 |
| Msa0356180 | MtrunA17_Chr3g0111311 | 58.209 | 67 | 23 | 3 | 53 | 119 | 29 | 90 | 2.41e-20 | 80.1 |
| Msa0356180 | MtrunA17_Chr7g0225821 | 41.270 | 126 | 66 | 6 | 1 | 124 | 1 | 120 | 6.59e-20 | 79.7 |
| Msa0356180 | MtrunA17_Chr8g0359071 | 34.899 | 149 | 67 | 6 | 3 | 144 | 4 | 129 | 3.11e-19 | 78.6 |
| Msa0356180 | MtrunA17_Chr3g0111711 | 40.496 | 121 | 56 | 4 | 1 | 117 | 1 | 109 | 1.17e-18 | 76.3 |
| Msa0356180 | MtrunA17_Chr3g0092851 | 58.730 | 63 | 24 | 2 | 1 | 61 | 1 | 63 | 5.25e-17 | 70.9 |
| Msa0356180 | MtrunA17_Chr3g0092881 | 57.576 | 66 | 27 | 1 | 1 | 65 | 1 | 66 | 2.17e-16 | 69.3 |
| Msa0356180 | MtrunA17_Chr3g0092841 | 57.576 | 66 | 27 | 1 | 1 | 65 | 1 | 66 | 4.72e-16 | 68.6 |
| Msa0356180 | MtrunA17_Chr3g0092801 | 57.576 | 66 | 27 | 1 | 1 | 65 | 1 | 66 | 4.72e-16 | 68.6 |
| Msa0356180 | MtrunA17_Chr3g0092704 | 80.488 | 41 | 8 | 0 | 1 | 41 | 1 | 41 | 8.77e-16 | 68.2 |
| Msa0356180 | MtrunA17_Chr6g0483481 | 39.316 | 117 | 57 | 4 | 23 | 132 | 5 | 114 | 4.45e-15 | 67.4 |
| Msa0356180 | MtrunA17_Chr3g0092901 | 57.895 | 57 | 23 | 1 | 1 | 57 | 1 | 56 | 1.41e-14 | 64.7 |
| Msa0356180 | MtrunA17_Chr3g0092771 | 93.750 | 32 | 2 | 0 | 1 | 32 | 1 | 32 | 2.35e-14 | 63.5 |
| Msa0356180 | MtrunA17_Chr3g0111201 | 47.619 | 63 | 22 | 1 | 88 | 150 | 3 | 54 | 7.94e-14 | 62.4 |
| Msa0356180 | MtrunA17_Chr3g0090581 | 57.143 | 49 | 21 | 0 | 21 | 69 | 22 | 70 | 8.90e-13 | 60.1 |
| Msa0356180 | MtrunA17_Chr3g0092941 | 81.081 | 37 | 6 | 1 | 1 | 36 | 1 | 37 | 1.56e-12 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 40 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATTATGTTCAGAACTAAT+TGG | 0.232965 | 3_1:-33986821 | None:intergenic |
| CCTAATGCTGATATTGAATA+TGG | 0.285356 | 3_1:+33986929 | Msa0356180:CDS |
| AGCAGGGAGCTGTCCGTCTC+AGG | 0.357261 | 3_1:+33986703 | Msa0356180:CDS |
| TTATGTTAAGCTTGCTACTT+TGG | 0.363249 | 3_1:+33986421 | Msa0356180:CDS |
| AGATTGTAGTTGTATCCCTT+GGG | 0.363389 | 3_1:+33986772 | Msa0356180:CDS |
| CTGCTTCAACGTTCTTCGTC+TGG | 0.376847 | 3_1:-33986685 | None:intergenic |
| TTGAAGAAATTGTTTACTAC+AGG | 0.382004 | 3_1:-33987007 | None:intergenic |
| GAGATTGTAGTTGTATCCCT+TGG | 0.382260 | 3_1:+33986771 | Msa0356180:CDS |
| AGCTTAACATAAGTCATTGT+TGG | 0.383649 | 3_1:-33986410 | None:intergenic |
| AGACTACTTGAAGATGGCTT+TGG | 0.386657 | 3_1:+33987054 | Msa0356180:CDS |
| GCAGAACGTTACTTCAAGAT+TGG | 0.399752 | 3_1:+33986977 | Msa0356180:CDS |
| AAAACAACCTTGGATTTCTT+CGG | 0.405097 | 3_1:+33987156 | Msa0356180:three_prime_UTR |
| CCATATTCAATATCAGCATT+AGG | 0.437256 | 3_1:-33986929 | None:intergenic |
| CAAGTCAAATATTGAACAAA+AGG | 0.441013 | 3_1:-33986729 | None:intergenic |
| TACTTTAAATAAAACAACCT+TGG | 0.442398 | 3_1:+33987146 | Msa0356180:three_prime_UTR |
| TGAGAAATATCATTCTTAAG+TGG | 0.452118 | 3_1:-33987083 | None:intergenic |
| TCTTCGGTATGTATTATGCA+TGG | 0.463568 | 3_1:+33987172 | Msa0356180:three_prime_UTR |
| GAAATTGTTTACTACAGGGT+TGG | 0.463585 | 3_1:-33987002 | None:intergenic |
| CTTCGGTATGTATTATGCAT+GGG | 0.481487 | 3_1:+33987173 | Msa0356180:three_prime_UTR |
| CAGACGAAGAACGTTGAAGC+AGG | 0.486278 | 3_1:+33986686 | Msa0356180:CDS |
| GAGTGCATCAAGAAGGGAAG+TGG | 0.522512 | 3_1:+33986887 | Msa0356180:CDS |
| TCATGCCGAGTGCATCAAGA+AGG | 0.559241 | 3_1:+33986880 | Msa0356180:CDS |
| GATTGTAGTTGTATCCCTTG+GGG | 0.572574 | 3_1:+33986773 | Msa0356180:CDS |
| GCAGGGAGCTGTCCGTCTCA+GGG | 0.576016 | 3_1:+33986704 | Msa0356180:CDS |
| ACTTCCCTTCTTGATGCACT+CGG | 0.605609 | 3_1:-33986885 | None:intergenic |
| ACAAATATACATACAGAATG+TGG | 0.609862 | 3_1:-33986459 | None:intergenic |
| TGAAGAAATTGTTTACTACA+GGG | 0.620608 | 3_1:-33987006 | None:intergenic |
| ATATTTGACTTGACACCATG+CGG | 0.621402 | 3_1:+33986740 | Msa0356180:CDS |
| CGTTCTGCTTCATCTACAGA+GGG | 0.621559 | 3_1:-33986962 | None:intergenic |
| CATGCCGAGTGCATCAAGAA+GGG | 0.625240 | 3_1:+33986881 | Msa0356180:CDS |
| GAACAAAAGGAACCCTGAGA+CGG | 0.632996 | 3_1:-33986716 | None:intergenic |
| AGACGAAGAACGTTGAAGCA+GGG | 0.637674 | 3_1:+33986687 | Msa0356180:CDS |
| ATGCTGATATTGAATATGGA+TGG | 0.639133 | 3_1:+33986933 | Msa0356180:CDS |
| AGTGCATCAAGAAGGGAAGT+GGG | 0.648471 | 3_1:+33986888 | Msa0356180:CDS |
| CAATCTCTGAGATTGCCGCA+TGG | 0.655920 | 3_1:-33986755 | None:intergenic |
| ACGTTCTGCTTCATCTACAG+AGG | 0.657683 | 3_1:-33986963 | None:intergenic |
| ATACATACCGAAGAAATCCA+AGG | 0.663976 | 3_1:-33987163 | None:intergenic |
| ATTGTAGTTGTATCCCTTGG+GGG | 0.670258 | 3_1:+33986774 | Msa0356180:CDS |
| ACATAATATGAAGATGATCG+AGG | 0.692790 | 3_1:+33986835 | Msa0356180:CDS |
| TAGATGCATGATAACATGCA+TGG | 0.728301 | 3_1:-33987122 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATGTATATTTGTTTAACAT+TGG | + | chr3_1:33986469-33986488 | Msa0356180:intron | 15.0% |
| !! | ATGTATATTTGTTTAACATT+GGG | + | chr3_1:33986470-33986489 | Msa0356180:intron | 15.0% |
| !! | TATGTATATTTGTTTAACAT+TGG | + | chr3_1:33986469-33986488 | Msa0356180:intron | 15.0% |
| !! | ATGTATATTTGTTTAACATT+GGG | + | chr3_1:33986470-33986489 | Msa0356180:intron | 15.0% |
| !! | TCGATATATATTTATGTGTT+AGG | + | chr3_1:33986506-33986525 | Msa0356180:intron | 20.0% |
| !! | TGTATATATTTACGAAAGTT+TGG | - | chr3_1:33986608-33986627 | None:intergenic | 20.0% |
| !! | ATATTATGTTCAGAACTAAT+TGG | - | chr3_1:33986824-33986843 | None:intergenic | 20.0% |
| !! | TACTTTAAATAAAACAACCT+TGG | + | chr3_1:33987146-33987165 | Msa0356180:three_prime_UTR | 20.0% |
| !! | TCGATATATATTTATGTGTT+AGG | + | chr3_1:33986506-33986525 | Msa0356180:intron | 20.0% |
| !! | TGTATATATTTACGAAAGTT+TGG | - | chr3_1:33986608-33986627 | None:intergenic | 20.0% |
| !! | ATATTATGTTCAGAACTAAT+TGG | - | chr3_1:33986824-33986843 | None:intergenic | 20.0% |
| !! | TACTTTAAATAAAACAACCT+TGG | + | chr3_1:33987146-33987165 | Msa0356180:three_prime_UTR | 20.0% |
| ! | ACAAATATACATACAGAATG+TGG | - | chr3_1:33986462-33986481 | None:intergenic | 25.0% |
| ! | CACATAAATATATATCGATG+AGG | - | chr3_1:33986504-33986523 | None:intergenic | 25.0% |
| ! | CAAGTCAAATATTGAACAAA+AGG | - | chr3_1:33986732-33986751 | None:intergenic | 25.0% |
| ! | TGAAGAAATTGTTTACTACA+GGG | - | chr3_1:33987009-33987028 | None:intergenic | 25.0% |
| ! | TTGAAGAAATTGTTTACTAC+AGG | - | chr3_1:33987010-33987029 | None:intergenic | 25.0% |
| ! | TGAGAAATATCATTCTTAAG+TGG | - | chr3_1:33987086-33987105 | None:intergenic | 25.0% |
| ! | ACAAATATACATACAGAATG+TGG | - | chr3_1:33986462-33986481 | None:intergenic | 25.0% |
| ! | CACATAAATATATATCGATG+AGG | - | chr3_1:33986504-33986523 | None:intergenic | 25.0% |
| ! | CAAGTCAAATATTGAACAAA+AGG | - | chr3_1:33986732-33986751 | None:intergenic | 25.0% |
| ! | TGAAGAAATTGTTTACTACA+GGG | - | chr3_1:33987009-33987028 | None:intergenic | 25.0% |
| ! | TTGAAGAAATTGTTTACTAC+AGG | - | chr3_1:33987010-33987029 | None:intergenic | 25.0% |
| ! | TGAGAAATATCATTCTTAAG+TGG | - | chr3_1:33987086-33987105 | None:intergenic | 25.0% |
| AGCTTAACATAAGTCATTGT+TGG | - | chr3_1:33986413-33986432 | None:intergenic | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:33986421-33986440 | Msa0356180:CDS | 30.0% |
| TACATTATTCACACGTGTAT+CGG | + | chr3_1:33986624-33986643 | Msa0356180:intron | 30.0% | |
| ACATAATATGAAGATGATCG+AGG | + | chr3_1:33986835-33986854 | Msa0356180:CDS | 30.0% | |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:33986932-33986951 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:33986929-33986948 | Msa0356180:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:33986933-33986952 | Msa0356180:CDS | 30.0% | |
| !! | GTCTTTTTCATTAGAGTTTG+AGG | - | chr3_1:33987038-33987057 | None:intergenic | 30.0% |
| TGAAAAAGACTACTTGAAGA+TGG | + | chr3_1:33987048-33987067 | Msa0356180:CDS | 30.0% | |
| AAAACAACCTTGGATTTCTT+CGG | + | chr3_1:33987156-33987175 | Msa0356180:three_prime_UTR | 30.0% | |
| AGCTTAACATAAGTCATTGT+TGG | - | chr3_1:33986413-33986432 | None:intergenic | 30.0% | |
| !! | TTATGTTAAGCTTGCTACTT+TGG | + | chr3_1:33986421-33986440 | Msa0356180:CDS | 30.0% |
| TACATTATTCACACGTGTAT+CGG | + | chr3_1:33986624-33986643 | Msa0356180:intron | 30.0% | |
| ACATAATATGAAGATGATCG+AGG | + | chr3_1:33986835-33986854 | Msa0356180:CDS | 30.0% | |
| CCATATTCAATATCAGCATT+AGG | - | chr3_1:33986932-33986951 | None:intergenic | 30.0% | |
| CCTAATGCTGATATTGAATA+TGG | + | chr3_1:33986929-33986948 | Msa0356180:CDS | 30.0% | |
| ATGCTGATATTGAATATGGA+TGG | + | chr3_1:33986933-33986952 | Msa0356180:CDS | 30.0% | |
| !! | GTCTTTTTCATTAGAGTTTG+AGG | - | chr3_1:33987038-33987057 | None:intergenic | 30.0% |
| TGAAAAAGACTACTTGAAGA+TGG | + | chr3_1:33987048-33987067 | Msa0356180:CDS | 30.0% | |
| AAAACAACCTTGGATTTCTT+CGG | + | chr3_1:33987156-33987175 | Msa0356180:three_prime_UTR | 30.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:33986652-33986671 | None:intergenic | 35.0% | |
| !! | ATATTTGACTTGACACCATG+CGG | + | chr3_1:33986740-33986759 | Msa0356180:CDS | 35.0% |
| AGATTGTAGTTGTATCCCTT+GGG | + | chr3_1:33986772-33986791 | Msa0356180:CDS | 35.0% | |
| ! | GCATGAGTTTTGCATAAGTT+AGG | - | chr3_1:33986866-33986885 | None:intergenic | 35.0% |
| GAAATTGTTTACTACAGGGT+TGG | - | chr3_1:33987005-33987024 | None:intergenic | 35.0% | |
| TAGATGCATGATAACATGCA+TGG | - | chr3_1:33987125-33987144 | None:intergenic | 35.0% | |
| ATACATACCGAAGAAATCCA+AGG | - | chr3_1:33987166-33987185 | None:intergenic | 35.0% | |
| TCTTCGGTATGTATTATGCA+TGG | + | chr3_1:33987172-33987191 | Msa0356180:three_prime_UTR | 35.0% | |
| CTTCGGTATGTATTATGCAT+GGG | + | chr3_1:33987173-33987192 | Msa0356180:three_prime_UTR | 35.0% | |
| ATGGCAAAGGCAGTTAAAAT+TGG | - | chr3_1:33986652-33986671 | None:intergenic | 35.0% | |
| !! | ATATTTGACTTGACACCATG+CGG | + | chr3_1:33986740-33986759 | Msa0356180:CDS | 35.0% |
| AGATTGTAGTTGTATCCCTT+GGG | + | chr3_1:33986772-33986791 | Msa0356180:CDS | 35.0% | |
| ! | GCATGAGTTTTGCATAAGTT+AGG | - | chr3_1:33986866-33986885 | None:intergenic | 35.0% |
| GAAATTGTTTACTACAGGGT+TGG | - | chr3_1:33987005-33987024 | None:intergenic | 35.0% | |
| TAGATGCATGATAACATGCA+TGG | - | chr3_1:33987125-33987144 | None:intergenic | 35.0% | |
| ATACATACCGAAGAAATCCA+AGG | - | chr3_1:33987166-33987185 | None:intergenic | 35.0% | |
| TCTTCGGTATGTATTATGCA+TGG | + | chr3_1:33987172-33987191 | Msa0356180:three_prime_UTR | 35.0% | |
| CTTCGGTATGTATTATGCAT+GGG | + | chr3_1:33987173-33987192 | Msa0356180:three_prime_UTR | 35.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:33986665-33986684 | None:intergenic | 40.0% | |
| GAGATTGTAGTTGTATCCCT+TGG | + | chr3_1:33986771-33986790 | Msa0356180:CDS | 40.0% | |
| GATTGTAGTTGTATCCCTTG+GGG | + | chr3_1:33986773-33986792 | Msa0356180:CDS | 40.0% | |
| ATTGTAGTTGTATCCCTTGG+GGG | + | chr3_1:33986774-33986793 | Msa0356180:CDS | 40.0% | |
| TACCAAAAAATAGCCCCCAA+GGG | - | chr3_1:33986790-33986809 | None:intergenic | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:33986977-33986996 | Msa0356180:CDS | 40.0% | |
| AGACTACTTGAAGATGGCTT+TGG | + | chr3_1:33987054-33987073 | Msa0356180:CDS | 40.0% | |
| ACGATTACTGCAAATGGCAA+AGG | - | chr3_1:33986665-33986684 | None:intergenic | 40.0% | |
| GAGATTGTAGTTGTATCCCT+TGG | + | chr3_1:33986771-33986790 | Msa0356180:CDS | 40.0% | |
| GATTGTAGTTGTATCCCTTG+GGG | + | chr3_1:33986773-33986792 | Msa0356180:CDS | 40.0% | |
| ATTGTAGTTGTATCCCTTGG+GGG | + | chr3_1:33986774-33986793 | Msa0356180:CDS | 40.0% | |
| TACCAAAAAATAGCCCCCAA+GGG | - | chr3_1:33986790-33986809 | None:intergenic | 40.0% | |
| GCAGAACGTTACTTCAAGAT+TGG | + | chr3_1:33986977-33986996 | Msa0356180:CDS | 40.0% | |
| AGACTACTTGAAGATGGCTT+TGG | + | chr3_1:33987054-33987073 | Msa0356180:CDS | 40.0% | |
| GTCTGGACGATTACTGCAAA+TGG | - | chr3_1:33986671-33986690 | None:intergenic | 45.0% | |
| AGACGAAGAACGTTGAAGCA+GGG | + | chr3_1:33986687-33986706 | Msa0356180:CDS | 45.0% | |
| GAACAAAAGGAACCCTGAGA+CGG | - | chr3_1:33986719-33986738 | None:intergenic | 45.0% | |
| !!! | ATCCCTTGGGGGCTATTTTT+TGG | + | chr3_1:33986785-33986804 | Msa0356180:CDS | 45.0% |
| GTACCAAAAAATAGCCCCCA+AGG | - | chr3_1:33986791-33986810 | None:intergenic | 45.0% | |
| ACTTCCCTTCTTGATGCACT+CGG | - | chr3_1:33986888-33986907 | None:intergenic | 45.0% | |
| AGTGCATCAAGAAGGGAAGT+GGG | + | chr3_1:33986888-33986907 | Msa0356180:CDS | 45.0% | |
| CGTTCTGCTTCATCTACAGA+GGG | - | chr3_1:33986965-33986984 | None:intergenic | 45.0% | |
| ACGTTCTGCTTCATCTACAG+AGG | - | chr3_1:33986966-33986985 | None:intergenic | 45.0% | |
| GTCTGGACGATTACTGCAAA+TGG | - | chr3_1:33986671-33986690 | None:intergenic | 45.0% | |
| AGACGAAGAACGTTGAAGCA+GGG | + | chr3_1:33986687-33986706 | Msa0356180:CDS | 45.0% | |
| GAACAAAAGGAACCCTGAGA+CGG | - | chr3_1:33986719-33986738 | None:intergenic | 45.0% | |
| !!! | ATCCCTTGGGGGCTATTTTT+TGG | + | chr3_1:33986785-33986804 | Msa0356180:CDS | 45.0% |
| GTACCAAAAAATAGCCCCCA+AGG | - | chr3_1:33986791-33986810 | None:intergenic | 45.0% | |
| ACTTCCCTTCTTGATGCACT+CGG | - | chr3_1:33986888-33986907 | None:intergenic | 45.0% | |
| AGTGCATCAAGAAGGGAAGT+GGG | + | chr3_1:33986888-33986907 | Msa0356180:CDS | 45.0% | |
| CGTTCTGCTTCATCTACAGA+GGG | - | chr3_1:33986965-33986984 | None:intergenic | 45.0% | |
| ACGTTCTGCTTCATCTACAG+AGG | - | chr3_1:33986966-33986985 | None:intergenic | 45.0% | |
| CTGCTTCAACGTTCTTCGTC+TGG | - | chr3_1:33986688-33986707 | None:intergenic | 50.0% | |
| CAGACGAAGAACGTTGAAGC+AGG | + | chr3_1:33986686-33986705 | Msa0356180:CDS | 50.0% | |
| !! | CAATCTCTGAGATTGCCGCA+TGG | - | chr3_1:33986758-33986777 | None:intergenic | 50.0% |
| TCATGCCGAGTGCATCAAGA+AGG | + | chr3_1:33986880-33986899 | Msa0356180:CDS | 50.0% | |
| CATGCCGAGTGCATCAAGAA+GGG | + | chr3_1:33986881-33986900 | Msa0356180:CDS | 50.0% | |
| GAGTGCATCAAGAAGGGAAG+TGG | + | chr3_1:33986887-33986906 | Msa0356180:CDS | 50.0% | |
| CTGCTTCAACGTTCTTCGTC+TGG | - | chr3_1:33986688-33986707 | None:intergenic | 50.0% | |
| CAGACGAAGAACGTTGAAGC+AGG | + | chr3_1:33986686-33986705 | Msa0356180:CDS | 50.0% | |
| !! | CAATCTCTGAGATTGCCGCA+TGG | - | chr3_1:33986758-33986777 | None:intergenic | 50.0% |
| TCATGCCGAGTGCATCAAGA+AGG | + | chr3_1:33986880-33986899 | Msa0356180:CDS | 50.0% | |
| CATGCCGAGTGCATCAAGAA+GGG | + | chr3_1:33986881-33986900 | Msa0356180:CDS | 50.0% | |
| GAGTGCATCAAGAAGGGAAG+TGG | + | chr3_1:33986887-33986906 | Msa0356180:CDS | 50.0% | |
| AGCAGGGAGCTGTCCGTCTC+AGG | + | chr3_1:33986703-33986722 | Msa0356180:CDS | 65.0% | |
| GCAGGGAGCTGTCCGTCTCA+GGG | + | chr3_1:33986704-33986723 | Msa0356180:CDS | 65.0% | |
| AGCAGGGAGCTGTCCGTCTC+AGG | + | chr3_1:33986703-33986722 | Msa0356180:CDS | 65.0% | |
| GCAGGGAGCTGTCCGTCTCA+GGG | + | chr3_1:33986704-33986723 | Msa0356180:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 33986368 | 33987206 | 33986368 | ID=Msa0356180;Name=Msa0356180 |
| chr3_1 | mRNA | 33986368 | 33987206 | 33986368 | ID=Msa0356180-mRNA-1;Parent=Msa0356180;Name=Msa0356180-mRNA-1;_AED=0.07;_eAED=0.07;_QI=48|1|1|1|1|1|2|116|154 |
| chr3_1 | exon | 33986368 | 33986467 | 33986368 | ID=Msa0356180-mRNA-1:exon:6477;Parent=Msa0356180-mRNA-1 |
| chr3_1 | exon | 33986678 | 33987206 | 33986678 | ID=Msa0356180-mRNA-1:exon:6478;Parent=Msa0356180-mRNA-1 |
| chr3_1 | five_prime_UTR | 33986368 | 33986415 | 33986368 | ID=Msa0356180-mRNA-1:five_prime_utr;Parent=Msa0356180-mRNA-1 |
| chr3_1 | CDS | 33986416 | 33986467 | 33986416 | ID=Msa0356180-mRNA-1:cds;Parent=Msa0356180-mRNA-1 |
| chr3_1 | CDS | 33986678 | 33987090 | 33986678 | ID=Msa0356180-mRNA-1:cds;Parent=Msa0356180-mRNA-1 |
| chr3_1 | three_prime_UTR | 33987091 | 33987206 | 33987091 | ID=Msa0356180-mRNA-1:three_prime_utr;Parent=Msa0356180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
