Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1330290 | 0.819028 | 1.440022e-52 | -8.615850e-47 |
| Msa0004860 | Msa1330290 | 0.806346 | 8.602456e-50 | -8.615850e-47 |
| Msa0004920 | Msa1330290 | 0.813773 | 2.159475e-51 | -8.615850e-47 |
| Msa0006070 | Msa1330290 | 0.805874 | 1.081140e-49 | -8.615850e-47 |
| Msa0011170 | Msa1330290 | 0.819366 | 1.206021e-52 | -8.615850e-47 |
| Msa0011960 | Msa1330290 | 0.810184 | 1.307566e-50 | -8.615850e-47 |
| Msa0014710 | Msa1330290 | 0.808076 | 3.698729e-50 | -8.615850e-47 |
| Msa0017510 | Msa1330290 | 0.815524 | 8.847807e-52 | -8.615850e-47 |
| Msa0020410 | Msa1330290 | 0.801028 | 1.092049e-48 | -8.615850e-47 |
| Msa0025730 | Msa1330290 | 0.802347 | 5.857698e-49 | -8.615850e-47 |
| Msa0028660 | Msa1330290 | 0.803300 | 3.723229e-49 | -8.615850e-47 |
| Msa0043980 | Msa1330290 | 0.803325 | 3.678559e-49 | -8.615850e-47 |
| Msa0051770 | Msa1330290 | 0.813940 | 1.984655e-51 | -8.615850e-47 |
| Msa0054480 | Msa1330290 | 0.807457 | 5.008064e-50 | -8.615850e-47 |
| Msa0068680 | Msa1330290 | 0.804576 | 2.021960e-49 | -8.615850e-47 |
| Msa0084380 | Msa1330290 | 0.818624 | 1.778862e-52 | -8.615850e-47 |
| Msa0084940 | Msa1330290 | 0.805014 | 1.637477e-49 | -8.615850e-47 |
| Msa0090360 | Msa1330290 | 0.806095 | 9.716604e-50 | -8.615850e-47 |
| Msa0109690 | Msa1330290 | 0.806006 | 1.014166e-49 | -8.615850e-47 |
| Msa0112750 | Msa1330290 | 0.812250 | 4.660283e-51 | -8.615850e-47 |
| Msa0112770 | Msa1330290 | 0.818118 | 2.315770e-52 | -8.615850e-47 |
| Msa0608710 | Msa1330290 | 0.801752 | 7.761870e-49 | -8.615850e-47 |
| Msa0610430 | Msa1330290 | 0.825074 | 5.714126e-54 | -8.615850e-47 |
| Msa0620960 | Msa1330290 | 0.806860 | 6.699489e-50 | -8.615850e-47 |
| Msa0621490 | Msa1330290 | 0.800748 | 1.245951e-48 | -8.615850e-47 |
| Msa0625720 | Msa1330290 | 0.808489 | 3.020625e-50 | -8.615850e-47 |
| Msa0626090 | Msa1330290 | 0.803648 | 3.153762e-49 | -8.615850e-47 |
| Msa0633840 | Msa1330290 | 0.833516 | 5.098676e-56 | -8.615850e-47 |
| Msa0638070 | Msa1330290 | 0.814064 | 1.863292e-51 | -8.615850e-47 |
| Msa0657970 | Msa1330290 | 0.818481 | 1.917013e-52 | -8.615850e-47 |
| Msa0661190 | Msa1330290 | -0.816955 | 4.234880e-52 | -8.615850e-47 |
| Msa0663390 | Msa1330290 | 0.810492 | 1.122019e-50 | -8.615850e-47 |
| Msa0673460 | Msa1330290 | 0.800693 | 1.278455e-48 | -8.615850e-47 |
| Msa0682550 | Msa1330290 | 0.802132 | 6.486236e-49 | -8.615850e-47 |
| Msa0688480 | Msa1330290 | 0.803144 | 4.011222e-49 | -8.615850e-47 |
| Msa0691900 | Msa1330290 | 0.808302 | 3.311046e-50 | -8.615850e-47 |
| Msa0692830 | Msa1330290 | 0.821499 | 3.909279e-53 | -8.615850e-47 |
| Msa0692950 | Msa1330290 | 0.817847 | 2.666061e-52 | -8.615850e-47 |
| Msa0693380 | Msa1330290 | 0.845588 | 3.699065e-59 | -8.615850e-47 |
| Msa0709500 | Msa1330290 | 0.808961 | 2.394005e-50 | -8.615850e-47 |
| Msa0711100 | Msa1330290 | 0.800563 | 1.359074e-48 | -8.615850e-47 |
| Msa0711780 | Msa1330290 | 0.810840 | 9.437925e-51 | -8.615850e-47 |
| Msa0715700 | Msa1330290 | 0.812037 | 5.184993e-51 | -8.615850e-47 |
| Msa0716840 | Msa1330290 | 0.801441 | 8.989963e-49 | -8.615850e-47 |
| Msa0717010 | Msa1330290 | 0.801048 | 1.082104e-48 | -8.615850e-47 |
| Msa0745790 | Msa1330290 | 0.829203 | 5.868951e-55 | -8.615850e-47 |
| Msa0750430 | Msa1330290 | 0.816076 | 6.662379e-52 | -8.615850e-47 |
| Msa0762970 | Msa1330290 | 0.800533 | 1.378263e-48 | -8.615850e-47 |
| Msa0765380 | Msa1330290 | 0.817133 | 3.861874e-52 | -8.615850e-47 |
| Msa0767220 | Msa1330290 | 0.800156 | 1.645192e-48 | -8.615850e-47 |
| Msa0771720 | Msa1330290 | 0.802635 | 5.108113e-49 | -8.615850e-47 |
| Msa0790510 | Msa1330290 | 0.816130 | 6.481737e-52 | -8.615850e-47 |
| Msa0790850 | Msa1330290 | 0.805526 | 1.279392e-49 | -8.615850e-47 |
| Msa0794670 | Msa1330290 | 0.816788 | 4.616369e-52 | -8.615850e-47 |
| Msa0795080 | Msa1330290 | 0.804780 | 1.832716e-49 | -8.615850e-47 |
| Msa0796700 | Msa1330290 | 0.803406 | 3.540095e-49 | -8.615850e-47 |
| Msa0808270 | Msa1330290 | 0.824077 | 9.812427e-54 | -8.615850e-47 |
| Msa0816590 | Msa1330290 | 0.800246 | 1.576667e-48 | -8.615850e-47 |
| Msa0816700 | Msa1330290 | 0.807802 | 4.229571e-50 | -8.615850e-47 |
| Msa0820850 | Msa1330290 | 0.822275 | 2.584856e-53 | -8.615850e-47 |
| Msa0824660 | Msa1330290 | 0.801644 | 8.168788e-49 | -8.615850e-47 |
| Msa0824680 | Msa1330290 | 0.800116 | 1.675979e-48 | -8.615850e-47 |
| Msa0827040 | Msa1330290 | 0.807137 | 5.854362e-50 | -8.615850e-47 |
| Msa0832150 | Msa1330290 | 0.810099 | 1.364007e-50 | -8.615850e-47 |
| Msa0840820 | Msa1330290 | 0.822694 | 2.065445e-53 | -8.615850e-47 |
| Msa0136070 | Msa1330290 | 0.810740 | 9.920561e-51 | -8.615850e-47 |
| Msa0137840 | Msa1330290 | 0.805533 | 1.275272e-49 | -8.615850e-47 |
| Msa0150820 | Msa1330290 | 0.811961 | 5.388849e-51 | -8.615850e-47 |
| Msa0151180 | Msa1330290 | 0.812379 | 4.366741e-51 | -8.615850e-47 |
| Msa0157100 | Msa1330290 | 0.812356 | 4.417380e-51 | -8.615850e-47 |
| Msa0157290 | Msa1330290 | 0.814175 | 1.761363e-51 | -8.615850e-47 |
| Msa0166870 | Msa1330290 | 0.816035 | 6.805479e-52 | -8.615850e-47 |
| Msa0173990 | Msa1330290 | 0.809231 | 2.095694e-50 | -8.615850e-47 |
| Msa0178930 | Msa1330290 | 0.803369 | 3.602997e-49 | -8.615850e-47 |
| Msa0184040 | Msa1330290 | 0.806097 | 9.704217e-50 | -8.615850e-47 |
| Msa0188830 | Msa1330290 | 0.804068 | 2.579898e-49 | -8.615850e-47 |
| Msa0206010 | Msa1330290 | 0.803546 | 3.310182e-49 | -8.615850e-47 |
| Msa0210450 | Msa1330290 | 0.810228 | 1.279439e-50 | -8.615850e-47 |
| Msa0217680 | Msa1330290 | 0.808506 | 2.995330e-50 | -8.615850e-47 |
| Msa0218270 | Msa1330290 | 0.813387 | 2.626775e-51 | -8.615850e-47 |
| Msa0220440 | Msa1330290 | 0.808835 | 2.547923e-50 | -8.615850e-47 |
| Msa0220580 | Msa1330290 | 0.813883 | 2.042995e-51 | -8.615850e-47 |
| Msa0222620 | Msa1330290 | 0.803803 | 2.928114e-49 | -8.615850e-47 |
| Msa0223410 | Msa1330290 | -0.803550 | 3.303947e-49 | -8.615850e-47 |
| Msa0228070 | Msa1330290 | 0.807757 | 4.324424e-50 | -8.615850e-47 |
| Msa1228590 | Msa1330290 | 0.810885 | 9.225661e-51 | -8.615850e-47 |
| Msa1233500 | Msa1330290 | 0.815582 | 8.588113e-52 | -8.615850e-47 |
| Msa1271210 | Msa1330290 | 0.808070 | 3.710458e-50 | -8.615850e-47 |
| Msa1276440 | Msa1330290 | 0.826400 | 2.770456e-54 | -8.615850e-47 |
| Msa1293280 | Msa1330290 | 0.812247 | 4.667699e-51 | -8.615850e-47 |
| Msa1302640 | Msa1330290 | 0.802546 | 5.328662e-49 | -8.615850e-47 |
| Msa1305190 | Msa1330290 | 0.827189 | 1.794651e-54 | -8.615850e-47 |
| Msa1305340 | Msa1330290 | 0.831038 | 2.092990e-55 | -8.615850e-47 |
| Msa1306840 | Msa1330290 | 0.816642 | 4.977358e-52 | -8.615850e-47 |
| Msa1313140 | Msa1330290 | 0.811568 | 6.558461e-51 | -8.615850e-47 |
| Msa1314340 | Msa1330290 | 0.808263 | 3.375253e-50 | -8.615850e-47 |
| Msa1330290 | Msa1331000 | 0.813763 | 2.170983e-51 | -8.615850e-47 |
| Msa1330290 | Msa1340260 | 0.810628 | 1.048687e-50 | -8.615850e-47 |
| Msa1330290 | Msa1343760 | 0.827232 | 1.753086e-54 | -8.615850e-47 |
| Msa1330290 | Msa1353980 | 0.810666 | 1.029101e-50 | -8.615850e-47 |
| Msa1330290 | Msa1356440 | 0.808860 | 2.516726e-50 | -8.615850e-47 |
| Msa1330290 | Msa1359040 | 0.819750 | 9.859655e-53 | -8.615850e-47 |
| Msa1330290 | Msa1373030 | 0.807159 | 5.792579e-50 | -8.615850e-47 |
| Msa1330290 | Msa1392260 | 0.803612 | 3.207761e-49 | -8.615850e-47 |
| Msa1330290 | Msa1397120 | 0.811589 | 6.490193e-51 | -8.615850e-47 |
| Msa1330290 | Msa1403340 | 0.805766 | 1.139462e-49 | -8.615850e-47 |
| Msa1330290 | Msa1403890 | 0.807930 | 3.973655e-50 | -8.615850e-47 |
| Msa1330290 | Msa1411020 | 0.803939 | 2.744238e-49 | -8.615850e-47 |
| Msa1330290 | Msa1420490 | 0.804240 | 2.375314e-49 | -8.615850e-47 |
| Msa1330290 | Msa1423390 | 0.803754 | 2.997095e-49 | -8.615850e-47 |
| Msa1330290 | Msa1423870 | 0.804395 | 2.205126e-49 | -8.615850e-47 |
| Msa1330290 | Msa1424450 | 0.838550 | 2.690520e-57 | -8.615850e-47 |
| Msa1330290 | Msa1427230 | 0.809969 | 1.454829e-50 | -8.615850e-47 |
| Msa1330290 | Msa1429900 | 0.800802 | 1.214748e-48 | -8.615850e-47 |
| Msa1330290 | Msa1433390 | 0.802491 | 5.471312e-49 | -8.615850e-47 |
| Msa1330290 | Msa1439320 | 0.802483 | 5.491857e-49 | -8.615850e-47 |
| Msa1330290 | Msa1440000 | 0.801706 | 7.933977e-49 | -8.615850e-47 |
| Msa1330290 | Msa1440370 | 0.802213 | 6.241502e-49 | -8.615850e-47 |
| Msa1330290 | Msa1440810 | 0.802468 | 5.529721e-49 | -8.615850e-47 |
| Msa1330290 | Msa1443850 | 0.800311 | 1.529563e-48 | -8.615850e-47 |
| Msa1330290 | Msa1444740 | 0.810284 | 1.244190e-50 | -8.615850e-47 |
| Msa1330290 | Msa1452240 | 0.801093 | 1.059267e-48 | -8.615850e-47 |
| Msa1330290 | Msa1460830 | 0.811723 | 6.070496e-51 | -8.615850e-47 |
| Msa1330290 | Msa1463670 | 0.807876 | 4.080313e-50 | -8.615850e-47 |
| Msa1330290 | Msa1466540 | 0.811895 | 5.568779e-51 | -8.615850e-47 |
| Msa0379640 | Msa1330290 | 0.814415 | 1.559123e-51 | -8.615850e-47 |
| Msa0383800 | Msa1330290 | 0.800726 | 1.259185e-48 | -8.615850e-47 |
| Msa0385580 | Msa1330290 | 0.817833 | 2.686479e-52 | -8.615850e-47 |
| Msa0388950 | Msa1330290 | 0.811117 | 8.217413e-51 | -8.615850e-47 |
| Msa0395970 | Msa1330290 | 0.802155 | 6.414358e-49 | -8.615850e-47 |
| Msa0412840 | Msa1330290 | 0.805268 | 1.448961e-49 | -8.615850e-47 |
| Msa0422400 | Msa1330290 | 0.804247 | 2.367831e-49 | -8.615850e-47 |
| Msa0433410 | Msa1330290 | -0.808478 | 3.036296e-50 | -8.615850e-47 |
| Msa0433640 | Msa1330290 | 0.803087 | 4.120330e-49 | -8.615850e-47 |
| Msa0442200 | Msa1330290 | 0.809401 | 1.927064e-50 | -8.615850e-47 |
| Msa0477130 | Msa1330290 | -0.813105 | 3.029092e-51 | -8.615850e-47 |
| Msa0481530 | Msa1330290 | 0.813699 | 2.243149e-51 | -8.615850e-47 |
| Msa0993290 | Msa1330290 | 0.812939 | 3.293443e-51 | -8.615850e-47 |
| Msa0993600 | Msa1330290 | 0.814853 | 1.246785e-51 | -8.615850e-47 |
| Msa1014540 | Msa1330290 | 0.820467 | 6.754572e-53 | -8.615850e-47 |
| Msa1023920 | Msa1330290 | 0.801912 | 7.198853e-49 | -8.615850e-47 |
| Msa1061680 | Msa1330290 | 0.803395 | 3.558577e-49 | -8.615850e-47 |
| Msa1063510 | Msa1330290 | 0.811571 | 6.549984e-51 | -8.615850e-47 |
| Msa1075540 | Msa1330290 | 0.819596 | 1.069146e-52 | -8.615850e-47 |
| Msa1082500 | Msa1330290 | 0.850382 | 1.760427e-60 | -8.615850e-47 |
| Msa1085200 | Msa1330290 | 0.801021 | 1.096115e-48 | -8.615850e-47 |
| Msa1098400 | Msa1330290 | 0.809461 | 1.870319e-50 | -8.615850e-47 |
| Msa1098420 | Msa1330290 | 0.813008 | 3.181085e-51 | -8.615850e-47 |
| Msa1100720 | Msa1330290 | 0.800598 | 1.336892e-48 | -8.615850e-47 |
| Msa0257460 | Msa1330290 | 0.804149 | 2.481841e-49 | -8.615850e-47 |
| Msa0260680 | Msa1330290 | 0.810763 | 9.804575e-51 | -8.615850e-47 |
| Msa0264150 | Msa1330290 | 0.807449 | 5.026851e-50 | -8.615850e-47 |
| Msa0270100 | Msa1330290 | 0.810209 | 1.291416e-50 | -8.615850e-47 |
| Msa0276920 | Msa1330290 | 0.800103 | 1.685834e-48 | -8.615850e-47 |
| Msa0279220 | Msa1330290 | 0.806242 | 9.047238e-50 | -8.615850e-47 |
| Msa0280090 | Msa1330290 | 0.815384 | 9.506048e-52 | -8.615850e-47 |
| Msa0287410 | Msa1330290 | 0.827063 | 1.924438e-54 | -8.615850e-47 |
| Msa0291500 | Msa1330290 | 0.811482 | 6.848860e-51 | -8.615850e-47 |
| Msa0299580 | Msa1330290 | 0.802888 | 4.530331e-49 | -8.615850e-47 |
| Msa0306210 | Msa1330290 | -0.800690 | 1.280317e-48 | -8.615850e-47 |
| Msa0309750 | Msa1330290 | 0.815446 | 9.207206e-52 | -8.615850e-47 |
| Msa0309770 | Msa1330290 | 0.828590 | 8.259635e-55 | -8.615850e-47 |
| Msa0318980 | Msa1330290 | 0.806594 | 7.626455e-50 | -8.615850e-47 |
| Msa0319170 | Msa1330290 | 0.806684 | 7.297433e-50 | -8.615850e-47 |
| Msa0326110 | Msa1330290 | 0.803140 | 4.018774e-49 | -8.615850e-47 |
| Msa0326520 | Msa1330290 | 0.802344 | 5.865051e-49 | -8.615850e-47 |
| Msa0329350 | Msa1330290 | 0.804308 | 2.299010e-49 | -8.615850e-47 |
| Msa0333030 | Msa1330290 | 0.810983 | 8.787249e-51 | -8.615850e-47 |
| Msa0334360 | Msa1330290 | 0.800007 | 1.763519e-48 | -8.615850e-47 |
| Msa0339620 | Msa1330290 | 0.805421 | 1.346184e-49 | -8.615850e-47 |
| Msa0344540 | Msa1330290 | 0.803332 | 3.667032e-49 | -8.615850e-47 |
| Msa0345970 | Msa1330290 | 0.800419 | 1.454084e-48 | -8.615850e-47 |
| Msa1109680 | Msa1330290 | 0.803426 | 3.506703e-49 | -8.615850e-47 |
| Msa1125760 | Msa1330290 | 0.800707 | 1.270251e-48 | -8.615850e-47 |
| Msa1131220 | Msa1330290 | 0.819859 | 9.306755e-53 | -8.615850e-47 |
| Msa1147970 | Msa1330290 | 0.802416 | 5.668560e-49 | -8.615850e-47 |
| Msa1151720 | Msa1330290 | 0.802538 | 5.349627e-49 | -8.615850e-47 |
| Msa1171360 | Msa1330290 | 0.807754 | 4.330420e-50 | -8.615850e-47 |
| Msa1172670 | Msa1330290 | 0.806387 | 8.431628e-50 | -8.615850e-47 |
| Msa1174040 | Msa1330290 | 0.811985 | 5.323604e-51 | -8.615850e-47 |
| Msa1181250 | Msa1330290 | 0.802440 | 5.605788e-49 | -8.615850e-47 |
| Msa1193290 | Msa1330290 | 0.805689 | 1.182263e-49 | -8.615850e-47 |
| Msa1203250 | Msa1330290 | 0.804295 | 2.313291e-49 | -8.615850e-47 |
| Msa1214890 | Msa1330290 | 0.802266 | 6.087696e-49 | -8.615850e-47 |
| Msa1217470 | Msa1330290 | 0.813576 | 2.386696e-51 | -8.615850e-47 |
| Msa0484780 | Msa1330290 | 0.855696 | 5.305419e-62 | -8.615850e-47 |
| Msa0485120 | Msa1330290 | 0.816398 | 5.644083e-52 | -8.615850e-47 |
| Msa0512750 | Msa1330290 | 0.800506 | 1.396240e-48 | -8.615850e-47 |
| Msa0512900 | Msa1330290 | 0.811870 | 5.640204e-51 | -8.615850e-47 |
| Msa0522070 | Msa1330290 | 0.801524 | 8.647488e-49 | -8.615850e-47 |
| Msa0523460 | Msa1330290 | 0.801730 | 7.845251e-49 | -8.615850e-47 |
| Msa0529890 | Msa1330290 | 0.806180 | 9.321904e-50 | -8.615850e-47 |
| Msa0532350 | Msa1330290 | 0.800097 | 1.690922e-48 | -8.615850e-47 |
| Msa0558690 | Msa1330290 | 0.806271 | 8.921561e-50 | -8.615850e-47 |
| Msa0562440 | Msa1330290 | 0.815141 | 1.075955e-51 | -8.615850e-47 |
| Msa0563840 | Msa1330290 | 0.829086 | 6.265993e-55 | -8.615850e-47 |
| Msa0571780 | Msa1330290 | 0.808136 | 3.592049e-50 | -8.615850e-47 |
| Msa0577500 | Msa1330290 | 0.812499 | 4.111560e-51 | -8.615850e-47 |
| Msa0585560 | Msa1330290 | 0.809566 | 1.776539e-50 | -8.615850e-47 |
| Msa0849030 | Msa1330290 | 0.804018 | 2.642056e-49 | -8.615850e-47 |
| Msa0857640 | Msa1330290 | 0.802087 | 6.627047e-49 | -8.615850e-47 |
| Msa0861130 | Msa1330290 | 0.825269 | 5.140338e-54 | -8.615850e-47 |
| Msa0869120 | Msa1330290 | 0.804845 | 1.776714e-49 | -8.615850e-47 |
| Msa0880140 | Msa1330290 | 0.814686 | 1.357450e-51 | -8.615850e-47 |
| Msa0897080 | Msa1330290 | 0.801039 | 1.086650e-48 | -8.615850e-47 |
| Msa0902760 | Msa1330290 | 0.800947 | 1.134857e-48 | -8.615850e-47 |
| Msa0938220 | Msa1330290 | 0.800762 | 1.238002e-48 | -8.615850e-47 |
| Msa0953550 | Msa1330290 | 0.800589 | 1.342575e-48 | -8.615850e-47 |
| Msa0954130 | Msa1330290 | 0.810525 | 1.104015e-50 | -8.615850e-47 |
| Msa0954550 | Msa1330290 | 0.801419 | 9.085156e-49 | -8.615850e-47 |
| Msa0969520 | Msa1330290 | 0.812626 | 3.856006e-51 | -8.615850e-47 |
| Msa0970030 | Msa1330290 | 0.811517 | 6.729983e-51 | -8.615850e-47 |
| Msa0974070 | Msa1330290 | 0.802787 | 4.752386e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 22 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTAACTTTGGTTCTTGT+TGG | 0.282315 | 8_4:-49448157 | None:intergenic |
| TATGGTCTCAGGGCATTTCT+TGG | 0.319037 | 8_4:+49447651 | Msa1330290:CDS |
| ACGGCAGATCTCTTGGATAT+TGG | 0.335031 | 8_4:+49447674 | Msa1330290:CDS |
| TTGGTAAACTTCCAAGCTTC+AGG | 0.335424 | 8_4:+49448456 | Msa1330290:CDS |
| ATGTAACTTTGGTTCTTGTT+GGG | 0.352850 | 8_4:-49448156 | None:intergenic |
| TTCTTGGACGGCAGATCTCT+TGG | 0.392988 | 8_4:+49447667 | Msa1330290:CDS |
| AACCTTTGTCATATGGTCTC+AGG | 0.396826 | 8_4:+49447640 | Msa1330290:CDS |
| TTCCAGGAACCTTTGTCATA+TGG | 0.405725 | 8_4:+49447633 | Msa1330290:intron |
| GATAGCTTAGCATTAAAGAT+TGG | 0.406188 | 8_4:+49447698 | Msa1330290:CDS |
| TGATGTGCCATACATTCCTT+TGG | 0.411199 | 8_4:-49448221 | None:intergenic |
| GTCTCAACCAAAGGAATGTA+TGG | 0.464060 | 8_4:+49448214 | Msa1330290:CDS |
| GAGCTGGTGGCAAGTGAACT+TGG | 0.472458 | 8_4:+49448437 | Msa1330290:CDS |
| ATAATGAGAAATCAGCAAAC+AGG | 0.486461 | 8_4:+49448186 | Msa1330290:CDS |
| ATTCAGGGCCTCCTGAAGCT+TGG | 0.487720 | 8_4:-49448467 | None:intergenic |
| GTCTCAGGGCATTTCTTGGA+CGG | 0.530873 | 8_4:+49447655 | Msa1330290:CDS |
| TAAAGATTGGAAGAGACAAC+CGG | 0.540202 | 8_4:+49447711 | Msa1330290:CDS |
| ACCTTTGTCATATGGTCTCA+GGG | 0.569086 | 8_4:+49447641 | Msa1330290:CDS |
| CAGGTATGTGTCTCAACCAA+AGG | 0.605607 | 8_4:+49448205 | Msa1330290:CDS |
| TTTCTTCAGATAGGAGCTGG+TGG | 0.615072 | 8_4:+49448424 | Msa1330290:intron |
| GTAAACTTCCAAGCTTCAGG+AGG | 0.619759 | 8_4:+49448459 | Msa1330290:CDS |
| TGTATGGCACATCATGCAAG+AGG | 0.656502 | 8_4:+49448230 | Msa1330290:CDS |
| GCCCTGAGACCATATGACAA+AGG | 0.691567 | 8_4:-49447642 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTTTGTTTTGTTT+TGG | + | chr8_4:49445879-49445898 | Msa1330290:intron | 10.0% |
| !!! | TATATTTTTTGTTTTGTTTT+GGG | + | chr8_4:49445880-49445899 | Msa1330290:intron | 10.0% |
| !!! | ATCATATTTTTAAATAGTTT+CGG | + | chr8_4:49446059-49446078 | Msa1330290:intron | 10.0% |
| !! | GAAATATAAAGTTATTAACA+TGG | + | chr8_4:49446742-49446761 | Msa1330290:intron | 15.0% |
| !! | TTATATAAAACTATATGAAG+AGG | - | chr8_4:49446956-49446975 | None:intergenic | 15.0% |
| !! | AATAAATTAACTAATTTCCT+AGG | - | chr8_4:49447037-49447056 | None:intergenic | 15.0% |
| !!! | CTTATTTAATTCACATTTTT+TGG | - | chr8_4:49447167-49447186 | None:intergenic | 15.0% |
| !!! | TAAGTCTTGTAAAATTAAAA+TGG | + | chr8_4:49447233-49447252 | Msa1330290:intron | 15.0% |
| !!! | AAGTCTTGTAAAATTAAAAT+GGG | + | chr8_4:49447234-49447253 | Msa1330290:intron | 15.0% |
| !! | AAAAGTTGAATATTGTAATA+TGG | + | chr8_4:49448041-49448060 | Msa1330290:intron | 15.0% |
| !! | CAACAAAGTTTATAAAATTA+GGG | - | chr8_4:49448119-49448138 | None:intergenic | 15.0% |
| !! | ACAACAAAGTTTATAAAATT+AGG | - | chr8_4:49448120-49448139 | None:intergenic | 15.0% |
| !!! | TTATTTTCTTTATGTAACTT+TGG | - | chr8_4:49448170-49448189 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTCTCCTTTTT+TGG | + | chr8_4:49445826-49445845 | Msa1330290:intron | 20.0% |
| !!! | TGTTTTGATAAAGGTATTAT+AGG | + | chr8_4:49445911-49445930 | Msa1330290:intron | 20.0% |
| !! | AATGAATTGAATTGCAATTT+AGG | + | chr8_4:49446000-49446019 | Msa1330290:intron | 20.0% |
| !! | ATGAATTGAATTGCAATTTA+GGG | + | chr8_4:49446001-49446020 | Msa1330290:intron | 20.0% |
| !! | TAAGCATTATCATGTAAAAT+CGG | - | chr8_4:49446248-49446267 | None:intergenic | 20.0% |
| !!! | GTATTCTTTATTTTCTGTTT+TGG | + | chr8_4:49446655-49446674 | Msa1330290:intron | 20.0% |
| !! | ATAGAAATCTTGTTAAAAAG+AGG | - | chr8_4:49446714-49446733 | None:intergenic | 20.0% |
| !! | ATTCAATTCAATGGTAATTT+GGG | - | chr8_4:49447097-49447116 | None:intergenic | 20.0% |
| !! | AATTCAATTCAATGGTAATT+TGG | - | chr8_4:49447098-49447117 | None:intergenic | 20.0% |
| !! | TACCATTGAATTGAATTTAT+TGG | + | chr8_4:49447101-49447120 | Msa1330290:intron | 20.0% |
| !!! | TACCAACATAAATTCTTTTT+TGG | - | chr8_4:49447139-49447158 | None:intergenic | 20.0% |
| !!! | ATTAAATAAGAGCATTATTG+TGG | + | chr8_4:49447177-49447196 | Msa1330290:intron | 20.0% |
| !!! | CAAAAGTGATTTATTTCTTA+AGG | - | chr8_4:49447753-49447772 | None:intergenic | 20.0% |
| !! | TAACAATAATGACATTAAAG+CGG | - | chr8_4:49447867-49447886 | None:intergenic | 20.0% |
| !!! | ATTGTTATTTTTTCCCTAAA+TGG | + | chr8_4:49447880-49447899 | Msa1330290:intron | 20.0% |
| !! | ATGTTCAGTATTTAAAAACA+CGG | + | chr8_4:49447915-49447934 | Msa1330290:intron | 20.0% |
| !! | GAATATTCAAAGTAAATACA+CGG | + | chr8_4:49448291-49448310 | Msa1330290:intron | 20.0% |
| ! | TAAATAACATACACTTGACT+TGG | + | chr8_4:49445739-49445758 | Msa1330290:intron | 25.0% |
| !!! | GTTTTGAAGTGTTTTGATAA+AGG | + | chr8_4:49445902-49445921 | Msa1330290:intron | 25.0% |
| !!! | ATAAAGGTATTATAGGATGA+TGG | + | chr8_4:49445918-49445937 | Msa1330290:intron | 25.0% |
| ! | CCAAATAAAATATCTGAGAA+TGG | - | chr8_4:49445962-49445981 | None:intergenic | 25.0% |
| !! | CCATTCTCAGATATTTTATT+TGG | + | chr8_4:49445959-49445978 | Msa1330290:intron | 25.0% |
| ! | CAATTCAATTCATTCTTCAT+CGG | - | chr8_4:49445994-49446013 | None:intergenic | 25.0% |
| ! | CAATGAATATGTTCTACTTT+GGG | + | chr8_4:49446428-49446447 | Msa1330290:intron | 25.0% |
| ! | AATGAATATGTTCTACTTTG+GGG | + | chr8_4:49446429-49446448 | Msa1330290:intron | 25.0% |
| ! | GATAGATAAGATTGTGTTAA+TGG | + | chr8_4:49446529-49446548 | Msa1330290:intron | 25.0% |
| !!! | TTTTTTGTCATGTCTTTCAA+AGG | + | chr8_4:49446561-49446580 | Msa1330290:intron | 25.0% |
| ! | ATCTCTATGCATTTATGAAA+AGG | - | chr8_4:49446592-49446611 | None:intergenic | 25.0% |
| ! | TACTGCATAACATAACATAT+TGG | + | chr8_4:49446778-49446797 | Msa1330290:intron | 25.0% |
| ! | AATTAACTAATTTCCTAGGT+AGG | - | chr8_4:49447033-49447052 | None:intergenic | 25.0% |
| ! | TGCCAAAAAAGAATTTATGT+TGG | + | chr8_4:49447134-49447153 | Msa1330290:intron | 25.0% |
| !! | ATAATAGAGCTCCTATATTT+TGG | + | chr8_4:49447261-49447280 | Msa1330290:intron | 25.0% |
| !! | TAATAGAGCTCCTATATTTT+GGG | + | chr8_4:49447262-49447281 | Msa1330290:intron | 25.0% |
| !! | ATTTAGTGATGTTGCTTATT+TGG | + | chr8_4:49447437-49447456 | Msa1330290:intron | 25.0% |
| !! | CTGTCTCTTGTTATAAAATA+TGG | - | chr8_4:49447498-49447517 | None:intergenic | 25.0% |
| ! | AACAATAATGACATTAAAGC+GGG | - | chr8_4:49447866-49447885 | None:intergenic | 25.0% |
| ! | TTCTAACAAATGACCATTTA+GGG | - | chr8_4:49447896-49447915 | None:intergenic | 25.0% |
| ! | ATTCTAACAAATGACCATTT+AGG | - | chr8_4:49447897-49447916 | None:intergenic | 25.0% |
| ! | TGTTCAGTATTTAAAAACAC+GGG | + | chr8_4:49447916-49447935 | Msa1330290:intron | 25.0% |
| ! | TGGTTAATGAACTTGTAATA+TGG | + | chr8_4:49448061-49448080 | Msa1330290:intron | 25.0% |
| !!! | TTTAGGTAGTTTTGATGTAT+CGG | + | chr8_4:49448382-49448401 | Msa1330290:intron | 25.0% |
| ! | TCATGTTAATTTCTTCAGAT+AGG | + | chr8_4:49448415-49448434 | Msa1330290:intron | 25.0% |
| ATACAATGTACAGCCAAAAA+AGG | - | chr8_4:49445842-49445861 | None:intergenic | 30.0% | |
| GGGATAAAATATTTCTTTCC+TGG | + | chr8_4:49446021-49446040 | Msa1330290:intron | 30.0% | |
| ATATTTCTTTCCTGGTGATT+TGG | + | chr8_4:49446029-49446048 | Msa1330290:intron | 30.0% | |
| TATTTCTTTCCTGGTGATTT+GGG | + | chr8_4:49446030-49446049 | Msa1330290:intron | 30.0% | |
| TTTCGGAAATCTGTTTAACT+AGG | + | chr8_4:49446076-49446095 | Msa1330290:intron | 30.0% | |
| AAAATCCAAATTCTTCCATC+AGG | - | chr8_4:49446284-49446303 | None:intergenic | 30.0% | |
| ! | TGATGGAAGAATTTGGATTT+TGG | + | chr8_4:49446283-49446302 | Msa1330290:intron | 30.0% |
| !! | TTTCTACTTTTCTTTCACAC+TGG | + | chr8_4:49446332-49446351 | Msa1330290:intron | 30.0% |
| !!! | TCTACTTATGACCACTTTTT+GGG | + | chr8_4:49446393-49446412 | Msa1330290:intron | 30.0% |
| GCAATGAATATGTTCTACTT+TGG | + | chr8_4:49446427-49446446 | Msa1330290:intron | 30.0% | |
| ! | TGGTCATGATTTGGATATAA+AGG | + | chr8_4:49446456-49446475 | Msa1330290:intron | 30.0% |
| ! | GGTCATGATTTGGATATAAA+GGG | + | chr8_4:49446457-49446476 | Msa1330290:intron | 30.0% |
| ! | GTCATGATTTGGATATAAAG+GGG | + | chr8_4:49446458-49446477 | Msa1330290:intron | 30.0% |
| ! | TCATGATTTGGATATAAAGG+GGG | + | chr8_4:49446459-49446478 | Msa1330290:intron | 30.0% |
| TCTATCCTACAGAAAATTGA+GGG | - | chr8_4:49446515-49446534 | None:intergenic | 30.0% | |
| ATCTATCCTACAGAAAATTG+AGG | - | chr8_4:49446516-49446535 | None:intergenic | 30.0% | |
| TCTATGCATTTATGAAAAGG+CGG | - | chr8_4:49446589-49446608 | None:intergenic | 30.0% | |
| GGCCAATAAATTCAATTCAA+TGG | - | chr8_4:49447106-49447125 | None:intergenic | 30.0% | |
| TAAAATATGGATGCGTGAAT+AGG | - | chr8_4:49447485-49447504 | None:intergenic | 30.0% | |
| ! | CAAAAGCATGTAAATCAAAG+CGG | - | chr8_4:49447567-49447586 | None:intergenic | 30.0% |
| GATAGCTTAGCATTAAAGAT+TGG | + | chr8_4:49447698-49447717 | Msa1330290:CDS | 30.0% | |
| ! | AGGTTTTCCATAAAGAATAC+CGG | - | chr8_4:49447733-49447752 | None:intergenic | 30.0% |
| ! | TTTTCTCAAGAAATGATGCT+TGG | - | chr8_4:49447812-49447831 | None:intergenic | 30.0% |
| GGCTAGGATCTAAAAAATTA+TGG | - | chr8_4:49447967-49447986 | None:intergenic | 30.0% | |
| ! | GTTAATGAACTCTTGTTTCT+TGG | + | chr8_4:49448083-49448102 | Msa1330290:intron | 30.0% |
| !! | ATGTAACTTTGGTTCTTGTT+GGG | - | chr8_4:49448159-49448178 | None:intergenic | 30.0% |
| !! | TATGTAACTTTGGTTCTTGT+TGG | - | chr8_4:49448160-49448179 | None:intergenic | 30.0% |
| ATAATGAGAAATCAGCAAAC+AGG | + | chr8_4:49448186-49448205 | Msa1330290:CDS | 30.0% | |
| CAAAGTAAATACACGGTAAA+TGG | + | chr8_4:49448298-49448317 | Msa1330290:intron | 30.0% | |
| ! | GCATTTTCTTTTTCTTCCTT+GGG | + | chr8_4:49448345-49448364 | Msa1330290:intron | 30.0% |
| AAATAGCACAAAAAAACCCA+AGG | - | chr8_4:49448364-49448383 | None:intergenic | 30.0% | |
| !!! | GGGTTTTTTTGTGCTATTTT+AGG | + | chr8_4:49448365-49448384 | Msa1330290:intron | 30.0% |
| ATTTCTTTCCTGGTGATTTG+GGG | + | chr8_4:49446031-49446050 | Msa1330290:intron | 35.0% | |
| TAACGAGATAGATAACCCAA+GGG | - | chr8_4:49446124-49446143 | None:intergenic | 35.0% | |
| TTGGGTTATCTATCTCGTTA+GGG | + | chr8_4:49446124-49446143 | Msa1330290:intron | 35.0% | |
| TTAGTCCTGATGGAAGAATT+TGG | + | chr8_4:49446276-49446295 | Msa1330290:intron | 35.0% | |
| ! | AAAAAAGCACAAGAGACAAC+AGG | - | chr8_4:49446312-49446331 | None:intergenic | 35.0% |
| !! | GTCTACTTATGACCACTTTT+TGG | + | chr8_4:49446392-49446411 | Msa1330290:intron | 35.0% |
| !!! | TGACCACTTTTTGGGAATTT+TGG | + | chr8_4:49446401-49446420 | Msa1330290:intron | 35.0% |
| ACACCAAAATTCCCAAAAAG+TGG | - | chr8_4:49446407-49446426 | None:intergenic | 35.0% | |
| ! | CATGATTTGGATATAAAGGG+GGG | + | chr8_4:49446460-49446479 | Msa1330290:intron | 35.0% |
| TATCCTACAGAAAATTGAGG+GGG | - | chr8_4:49446513-49446532 | None:intergenic | 35.0% | |
| CTATCCTACAGAAAATTGAG+GGG | - | chr8_4:49446514-49446533 | None:intergenic | 35.0% | |
| AGATTGTGTTAATGGTCTGT+CGG | + | chr8_4:49446537-49446556 | Msa1330290:intron | 35.0% | |
| !! | AATACTCAAGAGTACCAGAA+GGG | - | chr8_4:49446640-49446659 | None:intergenic | 35.0% |
| ACCTACAATAGATTTGCACT+GGG | - | chr8_4:49446868-49446887 | None:intergenic | 35.0% | |
| TACCTACAATAGATTTGCAC+TGG | - | chr8_4:49446869-49446888 | None:intergenic | 35.0% | |
| TGAACTAAAAACTCCTACCT+AGG | + | chr8_4:49447017-49447036 | Msa1330290:intron | 35.0% | |
| !!! | TTCTTTTTTGGCAAGAAGTC+TGG | - | chr8_4:49447127-49447146 | None:intergenic | 35.0% |
| TTCTTATGTCAGTGATCCAA+TGG | + | chr8_4:49447307-49447326 | Msa1330290:intron | 35.0% | |
| GTATGCTCTATCAAAGTTGT+TGG | + | chr8_4:49447385-49447404 | Msa1330290:intron | 35.0% | |
| AATCAAAGCGGAAAAGAAGT+TGG | - | chr8_4:49447555-49447574 | None:intergenic | 35.0% | |
| !! | CGCTTTGATTTACATGCTTT+TGG | + | chr8_4:49447565-49447584 | Msa1330290:intron | 35.0% |
| !! | TGTATTTTGCTTTGACTTCC+AGG | + | chr8_4:49447617-49447636 | Msa1330290:intron | 35.0% |
| TAAAGATTGGAAGAGACAAC+CGG | + | chr8_4:49447711-49447730 | Msa1330290:CDS | 35.0% | |
| ! | ATTACCACACATCAGTCTTT+TGG | + | chr8_4:49447831-49447850 | Msa1330290:intron | 35.0% |
| ATATCCAAAAGACTGATGTG+TGG | - | chr8_4:49447838-49447857 | None:intergenic | 35.0% | |
| GCTAAAACATCGTATATGAC+TGG | - | chr8_4:49448011-49448030 | None:intergenic | 35.0% | |
| AAAAGCAACAGCAATAATGC+AGG | + | chr8_4:49448268-49448287 | Msa1330290:intron | 35.0% | |
| AAAGCAACAGCAATAATGCA+GGG | + | chr8_4:49448269-49448288 | Msa1330290:intron | 35.0% | |
| ! | GGCATTTTCTTTTTCTTCCT+TGG | + | chr8_4:49448344-49448363 | Msa1330290:intron | 35.0% |
| TAATTTCTTCAGATAGGAGC+TGG | + | chr8_4:49448421-49448440 | Msa1330290:intron | 35.0% | |
| TTGCTAGTAATCCACGTGTT+TGG | - | chr8_4:49445715-49445734 | None:intergenic | 40.0% | |
| !!! | CAACGAGCATTGGATTTTAG+AGG | + | chr8_4:49445775-49445794 | Msa1330290:intron | 40.0% |
| CTAACGAGATAGATAACCCA+AGG | - | chr8_4:49446125-49446144 | None:intergenic | 40.0% | |
| CTTGGGTTATCTATCTCGTT+AGG | + | chr8_4:49446123-49446142 | Msa1330290:intron | 40.0% | |
| TAGTACTCAGTTAGTCCTGA+TGG | + | chr8_4:49446266-49446285 | Msa1330290:intron | 40.0% | |
| !!! | TTCACACTGGTCTTTTTCCT+TGG | + | chr8_4:49446345-49446364 | Msa1330290:intron | 40.0% |
| AGTGCAAGATCTATTGTCCA+AGG | - | chr8_4:49446365-49446384 | None:intergenic | 40.0% | |
| ! | GAATATGTTCTACTTTGGGG+CGG | + | chr8_4:49446432-49446451 | Msa1330290:intron | 40.0% |
| ! | ATTCCCCCTCAATTTTCTGT+AGG | + | chr8_4:49446507-49446526 | Msa1330290:intron | 40.0% |
| GATTGTGTTAATGGTCTGTC+GGG | + | chr8_4:49446538-49446557 | Msa1330290:intron | 40.0% | |
| ! | ACAGCATTTTAGATCCCTTC+TGG | + | chr8_4:49446623-49446642 | Msa1330290:intron | 40.0% |
| !! | GAATACTCAAGAGTACCAGA+AGG | - | chr8_4:49446641-49446660 | None:intergenic | 40.0% |
| GGACAAAGCACAACTATAGA+AGG | - | chr8_4:49446693-49446712 | None:intergenic | 40.0% | |
| AACCTCACTAAGTGCTCTTA+TGG | - | chr8_4:49446829-49446848 | None:intergenic | 40.0% | |
| ACCCAGTGCAAATCTATTGT+AGG | + | chr8_4:49446864-49446883 | Msa1330290:intron | 40.0% | |
| CTTTACCTTGTATGTGCAAG+CGG | + | chr8_4:49446890-49446909 | Msa1330290:intron | 40.0% | |
| !! | AGAGCTCCTATATTTTGGGA+TGG | + | chr8_4:49447266-49447285 | Msa1330290:intron | 40.0% |
| !!! | CTCCTATATTTTGGGATGGA+TGG | + | chr8_4:49447270-49447289 | Msa1330290:intron | 40.0% |
| CTCCATCCATCCCAAAATAT+AGG | - | chr8_4:49447275-49447294 | None:intergenic | 40.0% | |
| CCAATGGATACATGTTGTCA+CGG | + | chr8_4:49447323-49447342 | Msa1330290:intron | 40.0% | |
| TATGGATGCGTGAATAGGTT+GGG | - | chr8_4:49447480-49447499 | None:intergenic | 40.0% | |
| ATATGGATGCGTGAATAGGT+TGG | - | chr8_4:49447481-49447500 | None:intergenic | 40.0% | |
| TTCCAGGAACCTTTGTCATA+TGG | + | chr8_4:49447633-49447652 | Msa1330290:intron | 40.0% | |
| AACCTTTGTCATATGGTCTC+AGG | + | chr8_4:49447640-49447659 | Msa1330290:CDS | 40.0% | |
| ACCTTTGTCATATGGTCTCA+GGG | + | chr8_4:49447641-49447660 | Msa1330290:CDS | 40.0% | |
| GAGACAACCGGTATTCTTTA+TGG | + | chr8_4:49447723-49447742 | Msa1330290:intron | 40.0% | |
| ! | TTTTTAGATCCTAGCCACCA+CGG | + | chr8_4:49447971-49447990 | Msa1330290:intron | 40.0% |
| !!! | ACGATGTTTTAGCTTAGAGC+AGG | + | chr8_4:49448018-49448037 | Msa1330290:intron | 40.0% |
| GTCTCAACCAAAGGAATGTA+TGG | + | chr8_4:49448214-49448233 | Msa1330290:CDS | 40.0% | |
| TGATGTGCCATACATTCCTT+TGG | - | chr8_4:49448224-49448243 | None:intergenic | 40.0% | |
| ! | ACACCTTCTGACTTGATTGT+GGG | + | chr8_4:49448323-49448342 | Msa1330290:intron | 40.0% |
| TTGGTAAACTTCCAAGCTTC+AGG | + | chr8_4:49448456-49448475 | Msa1330290:CDS | 40.0% | |
| ATGCTCAATCTCCAAACACG+TGG | + | chr8_4:49445701-49445720 | Msa1330290:intron | 45.0% | |
| CCAATGCTCGTTGTTCAAGT+AGG | - | chr8_4:49445768-49445787 | None:intergenic | 45.0% | |
| CCTACTTGAACAACGAGCAT+TGG | + | chr8_4:49445765-49445784 | Msa1330290:intron | 45.0% | |
| GATAGATTCCCCAAATCACC+AGG | - | chr8_4:49446042-49446061 | None:intergenic | 45.0% | |
| TGTCTTAACTCAACCACCCT+TGG | + | chr8_4:49446105-49446124 | Msa1330290:intron | 45.0% | |
| GTCTTAACTCAACCACCCTT+GGG | + | chr8_4:49446106-49446125 | Msa1330290:intron | 45.0% | |
| ! | TGGCACTAGGTTGCTCTTTT+GGG | - | chr8_4:49446809-49446828 | None:intergenic | 45.0% |
| ! | ATGGCACTAGGTTGCTCTTT+TGG | - | chr8_4:49446810-49446829 | None:intergenic | 45.0% |
| CTAAGTGCTCTTATGGCACT+AGG | - | chr8_4:49446822-49446841 | None:intergenic | 45.0% | |
| !! | TGCCATAAGAGCACTTAGTG+AGG | + | chr8_4:49446824-49446843 | Msa1330290:intron | 45.0% |
| ! | AGAGCACTTAGTGAGGTTTC+AGG | + | chr8_4:49446831-49446850 | Msa1330290:intron | 45.0% |
| GAGCACTTAGTGAGGTTTCA+GGG | + | chr8_4:49446832-49446851 | Msa1330290:intron | 45.0% | |
| ACTTAGTGAGGTTTCAGGGA+AGG | + | chr8_4:49446836-49446855 | Msa1330290:intron | 45.0% | |
| CTTAGTGAGGTTTCAGGGAA+GGG | + | chr8_4:49446837-49446856 | Msa1330290:intron | 45.0% | |
| GAGGAGATTGACGTAACAGA+TGG | - | chr8_4:49446937-49446956 | None:intergenic | 45.0% | |
| CCGTGACAACATGTATCCAT+TGG | - | chr8_4:49447326-49447345 | None:intergenic | 45.0% | |
| TCTCGCACATGATCAAAAGC+AGG | - | chr8_4:49447362-49447381 | None:intergenic | 45.0% | |
| GACCATATGACAAAGGTTCC+TGG | - | chr8_4:49447638-49447657 | None:intergenic | 45.0% | |
| ! | TATGGTCTCAGGGCATTTCT+TGG | + | chr8_4:49447651-49447670 | Msa1330290:CDS | 45.0% |
| ACGGCAGATCTCTTGGATAT+TGG | + | chr8_4:49447674-49447693 | Msa1330290:CDS | 45.0% | |
| ! | TTTTCTTCCTTCTTCCGTGG+TGG | - | chr8_4:49447988-49448007 | None:intergenic | 45.0% |
| ! | TGGTTTTCTTCCTTCTTCCG+TGG | - | chr8_4:49447991-49448010 | None:intergenic | 45.0% |
| CAGGTATGTGTCTCAACCAA+AGG | + | chr8_4:49448205-49448224 | Msa1330290:CDS | 45.0% | |
| TGTATGGCACATCATGCAAG+AGG | + | chr8_4:49448230-49448249 | Msa1330290:CDS | 45.0% | |
| ! | CACACCTTCTGACTTGATTG+TGG | + | chr8_4:49448322-49448341 | Msa1330290:intron | 45.0% |
| ATGCCCACAATCAAGTCAGA+AGG | - | chr8_4:49448329-49448348 | None:intergenic | 45.0% | |
| TTTCTTCAGATAGGAGCTGG+TGG | + | chr8_4:49448424-49448443 | Msa1330290:intron | 45.0% | |
| GTAAACTTCCAAGCTTCAGG+AGG | + | chr8_4:49448459-49448478 | Msa1330290:CDS | 45.0% | |
| CGAGATAGATAACCCAAGGG+TGG | - | chr8_4:49446121-49446140 | None:intergenic | 50.0% | |
| !! | ATGTTCTACTTTGGGGCGGA+TGG | + | chr8_4:49446436-49446455 | Msa1330290:intron | 50.0% |
| ATCAGCCGCTTGCACATACA+AGG | - | chr8_4:49446898-49446917 | None:intergenic | 50.0% | |
| GCCCTGAGACCATATGACAA+AGG | - | chr8_4:49447645-49447664 | None:intergenic | 50.0% | |
| ! | GTCTCAGGGCATTTCTTGGA+CGG | + | chr8_4:49447655-49447674 | Msa1330290:CDS | 50.0% |
| TTCTTGGACGGCAGATCTCT+TGG | + | chr8_4:49447667-49447686 | Msa1330290:CDS | 50.0% | |
| TTCTTGTTGGGACAGCTGTC+AGG | - | chr8_4:49448147-49448166 | None:intergenic | 50.0% | |
| TGGGGCGGATGGTCATGATT+TGG | + | chr8_4:49446447-49446466 | Msa1330290:intron | 55.0% | |
| GTGAGGTTTCAGGGAAGGGT+TGG | + | chr8_4:49446841-49446860 | Msa1330290:intron | 55.0% | |
| !! | GTGCAAGCGGCTGATTTGCA+TGG | + | chr8_4:49446903-49446922 | Msa1330290:intron | 55.0% |
| ATCCTAGCCACCACGGAAGA+AGG | + | chr8_4:49447978-49447997 | Msa1330290:intron | 55.0% | |
| TTCCTTCTTCCGTGGTGGCT+AGG | - | chr8_4:49447983-49448002 | None:intergenic | 55.0% | |
| GAGCTGGTGGCAAGTGAACT+TGG | + | chr8_4:49448437-49448456 | Msa1330290:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 49445688 | 49448487 | 49445688 | ID=Msa1330290;Name=Msa1330290 |
| chr8_4 | mRNA | 49445688 | 49448487 | 49445688 | ID=Msa1330290-mRNA-1;Parent=Msa1330290;Name=Msa1330290-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.25|0|0.6|0.5|0.8|5|0|89 |
| chr8_4 | exon | 49445688 | 49445693 | 49445688 | ID=Msa1330290-mRNA-1:exon:14304;Parent=Msa1330290-mRNA-1 |
| chr8_4 | exon | 49445911 | 49445923 | 49445911 | ID=Msa1330290-mRNA-1:exon:14305;Parent=Msa1330290-mRNA-1 |
| chr8_4 | exon | 49447639 | 49447732 | 49447639 | ID=Msa1330290-mRNA-1:exon:14306;Parent=Msa1330290-mRNA-1 |
| chr8_4 | exon | 49448152 | 49448257 | 49448152 | ID=Msa1330290-mRNA-1:exon:14307;Parent=Msa1330290-mRNA-1 |
| chr8_4 | exon | 49448437 | 49448487 | 49448437 | ID=Msa1330290-mRNA-1:exon:14308;Parent=Msa1330290-mRNA-1 |
| chr8_4 | CDS | 49445688 | 49445693 | 49445688 | ID=Msa1330290-mRNA-1:cds;Parent=Msa1330290-mRNA-1 |
| chr8_4 | CDS | 49445911 | 49445923 | 49445911 | ID=Msa1330290-mRNA-1:cds;Parent=Msa1330290-mRNA-1 |
| chr8_4 | CDS | 49447639 | 49447732 | 49447639 | ID=Msa1330290-mRNA-1:cds;Parent=Msa1330290-mRNA-1 |
| chr8_4 | CDS | 49448152 | 49448257 | 49448152 | ID=Msa1330290-mRNA-1:cds;Parent=Msa1330290-mRNA-1 |
| chr8_4 | CDS | 49448437 | 49448487 | 49448437 | ID=Msa1330290-mRNA-1:cds;Parent=Msa1330290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
