AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0478740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0478740 MtrunA17_Chr3g0141571 98.165 218 4 0 2 219 6 223 1.55e-155 429
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0478740 AT5G42765.1 57.143 196 75 2 32 219 35 229 5.20e-75 226

Find 153 sgRNAs with CRISPR-Local

Find 459 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAATTTGAGCAGGGAATT+AGG 0.145021 3_3:-83605828 Msa0478740:CDS
CTGGCCAATCACTGTAAAAT+TGG 0.235892 3_3:-83604416 Msa0478740:three_prime_UTR
ATATCGTTTGAGTTGCTTAA+AGG 0.250789 3_3:+83604041 Msa0478730:CDS
TGATCCACTTGCTGCTTTGC+TGG 0.277427 3_3:+83603268 Msa0478730:CDS
AGCTTGTTGAAGAGATTTAA+TGG 0.282957 3_3:-83604525 Msa0478740:three_prime_UTR
TGCCACTCTGGTTAAGGATT+TGG 0.289529 3_3:-83604172 Msa0478740:three_prime_UTR
ATCATGTCTGATCAAGTAAA+TGG 0.290117 3_3:+83603083 Msa0478730:exon
TTGTACTTGGTGGAAGCTTC+TGG 0.291125 3_3:+83604606 Msa0478730:CDS
ATTGTGTGTTACACAAAATA+AGG 0.292177 3_3:-83603062 Msa0478740:three_prime_UTR
CCTGTGCTTCTCTGCCATTC+GGG 0.295298 3_3:-83603427 Msa0478740:three_prime_UTR
AGAGGAGCTTAAAGAGGTTT+GGG 0.296735 3_3:-83602995 Msa0478740:three_prime_UTR
CAAATTTGAGCAGGGAATTA+GGG 0.303825 3_3:-83605827 Msa0478740:CDS
GCTTAAAGAGGTTTGGGGTT+GGG 0.307755 3_3:-83602989 Msa0478740:three_prime_UTR
CCACTTGCTGCTTTGCTGGC+AGG 0.313162 3_3:+83603272 Msa0478730:CDS
CTTTGCTAGATAATCTTATA+AGG 0.329612 3_3:-83607414 Msa0478740:intron
TAGAGGAGCTTAAAGAGGTT+TGG 0.349102 3_3:-83602996 Msa0478740:three_prime_UTR
GTAAAATTGGAATACTGAAT+TGG 0.351492 3_3:-83604403 Msa0478740:three_prime_UTR
ATGGAAAAGCTTCAAATTGC+AGG 0.352932 3_3:+83604219 Msa0478730:CDS
GTCAGCTGCCACTCTGGTTA+AGG 0.354833 3_3:-83604178 Msa0478740:three_prime_UTR
CAGTTGCATGGCGTTGGATT+GGG 0.355782 3_3:-83604298 Msa0478740:three_prime_UTR
GCAGTTGCATGGCGTTGGAT+TGG 0.356550 3_3:-83604299 Msa0478740:three_prime_UTR
ACCTGTGCTTCTCTGCCATT+CGG 0.360737 3_3:-83603428 Msa0478740:three_prime_UTR
CAGCATGGTGTTCCGTCATC+TGG 0.362251 3_3:-83604579 Msa0478740:three_prime_UTR
CACTTGCTGCTTTGCTGGCA+GGG 0.366484 3_3:+83603273 Msa0478730:CDS
AACAATGCTCGTGAAACTTC+TGG 0.370805 3_3:+83603344 Msa0478730:CDS
GGAGACCCAGATGCCCATTT+CGG 0.372976 3_3:+83604489 Msa0478730:CDS
ACACAAAATAAGGGATTAAG+AGG 0.386028 3_3:-83603052 Msa0478740:three_prime_UTR
AAGAGGCCGAAATGGGCATC+TGG 0.390257 3_3:-83604495 Msa0478740:three_prime_UTR
GTTGCGTGGACCTGTCGAAC+AGG 0.390970 3_3:-83603164 Msa0478740:three_prime_UTR
GAAAATGTGAGAAGAGGAAA+GGG 0.391368 3_3:+83608505 None:intergenic
TCTGGTTAAGGATTTGGCTT+TGG 0.395848 3_3:-83604166 Msa0478740:three_prime_UTR
GGAAAATTGCGTGGTGGCGG+TGG 0.396344 3_3:+83608550 None:intergenic
ACATGTGTGAAGCCAATAGA+TGG 0.399797 3_3:-83604450 Msa0478740:three_prime_UTR
TTTGGCAAGCTGACCTTTGA+AGG 0.402317 3_3:-83603208 Msa0478740:three_prime_UTR
GATCATTCAAGAGGCCGAAA+TGG 0.408961 3_3:-83604503 Msa0478740:three_prime_UTR
ATGCACAGGTGTGCACATTT+CGG 0.409608 3_3:-83607501 Msa0478740:intron
CATGTAAAACTTTCACAGAT+TGG 0.409955 3_3:+83604468 Msa0478730:CDS
AGGATCCTTCTTTCCAAGTA+AGG 0.413310 3_3:+83607456 None:intergenic
AAGAATGCAGCCTCCTTACT+TGG 0.416867 3_3:-83607469 Msa0478740:CDS
TGCATGTTATTTATATATAG+AGG 0.416921 3_3:-83603013 Msa0478740:three_prime_UTR
AGCTTAAAGAGGTTTGGGGT+TGG 0.418278 3_3:-83602990 Msa0478740:three_prime_UTR
AGCTATTCAGATCTGCTGCC+AGG 0.418971 3_3:-83608076 Msa0478740:CDS
TTGTGTGTTACACAAAATAA+GGG 0.419061 3_3:-83603061 Msa0478740:three_prime_UTR
ATCCTCTGGGACACAATCCC+TGG 0.420882 3_3:+83608058 None:intergenic
CACTATTCTGCAAGCAGCTA+AGG 0.423193 3_3:+83604113 Msa0478730:CDS
GAAAGGGGAAGGTTACGTTT+TGG 0.426235 3_3:+83608521 None:intergenic
CCTCAACTCCGGTGTTAGCT+TGG 0.430121 3_3:+83608015 None:intergenic
ATCTCTCGACAAATTTGAGC+AGG 0.434085 3_3:-83605836 Msa0478740:CDS
ATTTGCCAGCCCACTGATAG+AGG 0.436497 3_3:+83606169 None:intergenic
CAGGTTGTTCTCCTAGGTGC+AGG 0.437261 3_3:+83603446 Msa0478730:CDS
TTATTTACAGTCAGATTTCA+AGG 0.438898 3_3:+83605800 None:intergenic
ACTTGCTGCTTTGCTGGCAG+GGG 0.441240 3_3:+83603274 Msa0478730:CDS
TCTTATGTCAGCTGCCACTC+TGG 0.442727 3_3:-83604184 Msa0478740:three_prime_UTR
CTGACATAAGAGAAAATGAT+TGG 0.443102 3_3:+83604196 Msa0478730:CDS
GGTTTAGCTCTGGCCATGCT+TGG 0.443811 3_3:-83603118 Msa0478740:three_prime_UTR
AAAGGACAGCGATGTCTTTG+AGG 0.446558 3_3:+83604059 Msa0478730:CDS
GGTTGACTTTGCAGAAGTCT+TGG 0.451465 3_3:+83604080 Msa0478730:CDS
CCTGCCTCCGCCATTGACAT+TGG 0.453752 3_3:-83608437 Msa0478740:CDS
TGCAAAATTTGATGCAGGAA+TGG 0.455246 3_3:+83604008 Msa0478730:intron
AAGATTATCTAGCAAAGCTT+CGG 0.455272 3_3:+83607420 None:intergenic
GGGTCAGTATGTAACAAGTC+TGG 0.458829 3_3:-83603143 Msa0478740:three_prime_UTR
ACGAAAGAATTCCTATCCTC+TGG 0.460313 3_3:+83608044 None:intergenic
TAGCCCTTCCTGCAGCCGTT+TGG 0.463381 3_3:-83603226 Msa0478740:three_prime_UTR
TCTCAGCAGTTGCATGGCGT+TGG 0.466299 3_3:-83604304 Msa0478740:three_prime_UTR
TCCTTGCAGTTAGAACGCTT+TGG 0.467503 3_3:+83603372 Msa0478730:CDS
CCAATGTCAATGGCGGAGGC+AGG 0.469297 3_3:+83608437 None:intergenic
CGCAACAATTGAAAAGGAAT+GGG 0.471274 3_3:+83603181 Msa0478730:CDS
ACCATGCTGTCGCTTGTACT+TGG 0.472145 3_3:+83604593 Msa0478730:CDS
ATCATTCAAGAGGCCGAAAT+GGG 0.474174 3_3:-83604502 Msa0478740:three_prime_UTR
CTTGCCAAACGGCTGCAGGA+AGG 0.480463 3_3:+83603222 Msa0478730:CDS
TTGCCAAACGGCTGCAGGAA+GGG 0.481862 3_3:+83603223 Msa0478730:CDS
TACCACAGAAGAGCACGGTC+TGG 0.483659 3_3:+83604247 Msa0478730:CDS
AGCACGGTCTGGATTCTAGA+AGG 0.484304 3_3:+83604258 Msa0478730:CDS
TTTCAGCAGGACCAAAGGAT+TGG 0.485707 3_3:-83608334 Msa0478740:intron
GAAGCACAGGTTGTTCTCCT+AGG 0.487419 3_3:+83603440 Msa0478730:CDS
TCAGCTTGCCAAACGGCTGC+AGG 0.487788 3_3:+83603218 Msa0478730:CDS
TGGTGTTCCGTCATCTGGAT+TGG 0.488532 3_3:-83604574 Msa0478740:three_prime_UTR
ATAGATGGTAAAAGTTGGTC+TGG 0.488683 3_3:-83604435 Msa0478740:three_prime_UTR
ACGCAACAATTGAAAAGGAA+TGG 0.493384 3_3:+83603180 Msa0478730:CDS
TGGATTGGGCGAGGTAGTAT+AGG 0.496759 3_3:-83604284 Msa0478740:three_prime_UTR
GAGGGAAAATTGCGTGGTGG+CGG 0.498398 3_3:+83608547 None:intergenic
ATATATAGAGGAGCTTAAAG+AGG 0.501537 3_3:-83603001 Msa0478740:three_prime_UTR
ACATACTGACCCTGTTCGAC+AGG 0.504111 3_3:+83603154 Msa0478730:CDS
TTATGCGCAGAACTTTGATC+GGG 0.506535 3_3:-83604633 Msa0478740:intron
GCAAAGCAGCAAGTGGATCA+TGG 0.508155 3_3:-83603265 Msa0478740:three_prime_UTR
CCCGAATGGCAGAGAAGCAC+AGG 0.509784 3_3:+83603427 Msa0478730:CDS
GACAGGAGCAAGTAGAAACT+TGG 0.510332 3_3:+83608286 None:intergenic
CAAAATAGCAGATGCTGTAT+CGG 0.511930 3_3:-83605869 Msa0478740:CDS
CATAAGAGAAAATGATTGGA+TGG 0.512586 3_3:+83604200 Msa0478730:CDS
TGACTTTGCAGAAGTCTTGG+AGG 0.519811 3_3:+83604083 Msa0478730:CDS
GGTCCACGCAACAATTGAAA+AGG 0.522870 3_3:+83603175 Msa0478730:CDS
AGAAAATGTGAGAAGAGGAA+AGG 0.523134 3_3:+83608504 None:intergenic
ATCCGATGCAAGTTCAATGT+TGG 0.523773 3_3:+83606142 None:intergenic
ATTATGCGCAGAACTTTGAT+CGG 0.524410 3_3:-83604634 Msa0478740:intron
GCTTTGGTTTGATTCTAGAC+TGG 0.526315 3_3:+83603388 Msa0478730:CDS
ATGCTGTCGCTTGTACTTGG+TGG 0.529839 3_3:+83604596 Msa0478730:CDS
GGATTAAGAGGTTTGTGAAG+AGG 0.530128 3_3:-83603040 Msa0478740:three_prime_UTR
AGCCTCCTTACTTGGAAAGA+AGG 0.530286 3_3:-83607461 Msa0478740:CDS
CTTTCACGAGAGGCATCGAC+AGG 0.534229 3_3:+83608269 None:intergenic
ACAAGCTCCGCAACTTGCCT+AGG 0.536607 3_3:+83604541 Msa0478730:CDS
GCTTCGGCTTCTAACTTCAC+AGG 0.539658 3_3:+83607436 None:intergenic
CCAAGCTAACACCGGAGTTG+AGG 0.540940 3_3:-83608015 Msa0478740:intron
CGGCTGCAGGAAGGGCTATG+TGG 0.545627 3_3:+83603231 Msa0478730:CDS
CTTACAGATGCCAATGTCAA+TGG 0.546752 3_3:+83608427 None:intergenic
GCATGGCGTTGGATTGGGCG+AGG 0.548828 3_3:-83604293 Msa0478740:three_prime_UTR
ATTCGCCTCTATCAGTGGGC+TGG 0.549750 3_3:-83606174 Msa0478740:CDS
ACTTATTCATGAAGTCTGCT+AGG 0.551456 3_3:-83604365 Msa0478740:three_prime_UTR
AACCAACATTGAACTTGCAT+CGG 0.552247 3_3:-83606144 Msa0478740:CDS
AAGTCTGGAAGGTTTAGCTC+TGG 0.555279 3_3:-83603128 Msa0478740:three_prime_UTR
GGGATTGTGTCCCAGAGGAT+AGG 0.557429 3_3:-83608055 Msa0478740:CDS
CGAAAGAATTCCTATCCTCT+GGG 0.559179 3_3:+83608045 None:intergenic
AGAGGCCGAAATGGGCATCT+GGG 0.562365 3_3:-83604494 Msa0478740:three_prime_UTR
GAGGAGCTTAAAGAGGTTTG+GGG 0.562575 3_3:-83602994 Msa0478740:three_prime_UTR
AGGAATGGGATTTCCTTCAA+AGG 0.566300 3_3:+83603195 Msa0478730:CDS
GCTATTCAGATCTGCTGCCA+GGG 0.570782 3_3:-83608075 Msa0478740:CDS
AGCCAATAGATGGTAAAAGT+TGG 0.570838 3_3:-83604440 Msa0478740:three_prime_UTR
GCGAGAGAAAATGTGAGAAG+AGG 0.571071 3_3:+83608499 None:intergenic
CCTGCCAGCAAAGCAGCAAG+TGG 0.579542 3_3:-83603272 Msa0478740:three_prime_UTR
ACCAAAGCGTTCTAACTGCA+AGG 0.581770 3_3:-83603373 Msa0478740:three_prime_UTR
AGATCATTCGCCTCTATCAG+TGG 0.582090 3_3:-83606179 Msa0478740:CDS
GATGCCAATGTCAATGGCGG+AGG 0.585232 3_3:+83608433 None:intergenic
ATCCAGACCGTGCTCTTCTG+TGG 0.590430 3_3:-83604249 Msa0478740:three_prime_UTR
GCTTGCAAGACAACCAAGCA+TGG 0.591039 3_3:+83603105 Msa0478730:CDS
TAAAATTCTCAGCAGTTGCA+TGG 0.596944 3_3:-83604310 Msa0478740:three_prime_UTR
GGATTGGTTTGTAATGACCT+AGG 0.599942 3_3:-83604558 Msa0478740:three_prime_UTR
TGTGAGAAGAGGAAAGGGGA+AGG 0.601169 3_3:+83608510 None:intergenic
GATCATTCGCCTCTATCAGT+GGG 0.609222 3_3:-83606178 Msa0478740:CDS
TCAAAGGTCAGCTTGCCAAA+CGG 0.612550 3_3:+83603211 Msa0478730:CDS
ATCCTTCTTTCCAAGTAAGG+AGG 0.613899 3_3:+83607459 None:intergenic
ACCAAGTACAAGCGACAGCA+TGG 0.615849 3_3:-83604594 Msa0478740:three_prime_UTR
AGAGCGAAGGCTTTCACGAG+AGG 0.617224 3_3:+83608259 None:intergenic
GTAATGACCTAGGCAAGTTG+CGG 0.618313 3_3:-83604548 Msa0478740:three_prime_UTR
GATTTAATGGATCATTCAAG+AGG 0.619216 3_3:-83604512 Msa0478740:three_prime_UTR
GATAAAGATAAACAGAGCGA+AGG 0.620190 3_3:+83608246 None:intergenic
CAGTATGTAACAAGTCTGGA+AGG 0.620530 3_3:-83603139 Msa0478740:three_prime_UTR
GATGTTCTCAGTTCCCCGAA+TGG 0.621167 3_3:+83603413 Msa0478730:CDS
GTAGCTTTCCAAGCTAACAC+CGG 0.624252 3_3:-83608023 Msa0478740:CDS
CTGTGCTTCTCTGCCATTCG+GGG 0.625733 3_3:-83603426 Msa0478740:three_prime_UTR
TCTCTCGACAAATTTGAGCA+GGG 0.625790 3_3:-83605835 Msa0478740:CDS
ACATTGAACTTGCATCGGAT+AGG 0.626460 3_3:-83606139 Msa0478740:intron
TGGAGGGAGGGAAAATTGCG+TGG 0.627924 3_3:+83608541 None:intergenic
AAAATGTGAGAAGAGGAAAG+GGG 0.629256 3_3:+83608506 None:intergenic
CAATTGTGTCTTAACTCACA+CGG 0.633180 3_3:+83604338 Msa0478730:CDS
TTACAAACCAATCCAGATGA+CGG 0.634102 3_3:+83604567 Msa0478730:CDS
ACAAAGACAAACCTCAACTC+CGG 0.639797 3_3:+83608004 None:intergenic
TTGCGTGGACCTGTCGAACA+GGG 0.640836 3_3:-83603163 Msa0478740:three_prime_UTR
TTTCTTACCACAGAAGAGCA+CGG 0.661986 3_3:+83604242 Msa0478730:CDS
AGCCAAATCCTTAACCAGAG+TGG 0.662283 3_3:+83604170 Msa0478730:CDS
GTGTCTACAAACCTGCACCT+AGG 0.662807 3_3:-83603457 Msa0478740:intron
ACAGATGCCAATGTCAATGG+CGG 0.683825 3_3:+83608430 None:intergenic
GAATACTGAATTGGATAGCG+TGG 0.687583 3_3:-83604394 Msa0478740:three_prime_UTR
TGCCAGGGATTGTGTCCCAG+AGG 0.697985 3_3:-83608060 Msa0478740:CDS
AGGGAGGGAAAATTGCGTGG+TGG 0.725144 3_3:+83608544 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTTATTATATTTATAT+AGG - chr3_3:83603462-83603481 Msa0478740:intron 0.0%
!! TATAATAAAATATAATAATA+GGG + chr3_3:83603968-83603987 Msa0478730:intron 0.0%
!!! TAATAAAATATTTTTTTGAG+GGG - chr3_3:83603020-83603039 Msa0478740:three_prime_UTR 10.0%
!!! TTGATTTAAAATAAATAAAG+AGG + chr3_3:83603099-83603118 Msa0478730:CDS 10.0%
!!! CTTATTCATTATTTTAAATA+CGG + chr3_3:83603684-83603703 Msa0478730:intron 10.0%
!!! ATGAATGAAAAATTTAAAAT+TGG - chr3_3:83604069-83604088 Msa0478740:three_prime_UTR 10.0%
!! AATAAATTAAAATGAAAAGT+TGG - chr3_3:83604473-83604492 Msa0478740:three_prime_UTR 10.0%
!!! AATCAATTTTTTTTATTTTC+AGG - chr3_3:83607367-83607386 Msa0478740:intron 10.0%
!!! TTTTAATTAATTCTTATTGT+TGG + chr3_3:83608548-83608567 None:intergenic 10.0%
!!! TTTAAAATAAATAAAGAGGT+GGG + chr3_3:83603095-83603114 Msa0478730:CDS 15.0%
!!! ATTTAAAATAAATAAAGAGG+TGG + chr3_3:83603096-83603115 Msa0478730:CDS 15.0%
!! CTGAAAAAATATTATGTTAA+TGG + chr3_3:83603151-83603170 Msa0478730:CDS 15.0%
!! TAACTTAGAAAATAAATTGA+TGG + chr3_3:83603312-83603331 Msa0478730:CDS 15.0%
!! AGATGTTAAAAATTAAATTG+AGG - chr3_3:83603389-83603408 Msa0478740:three_prime_UTR 15.0%
!!! GATTTTATAGATTAAATTGA+TGG - chr3_3:83603506-83603525 Msa0478740:intron 15.0%
!!! TAAATTGATGGTTTATTTTA+TGG - chr3_3:83603518-83603537 Msa0478740:intron 15.0%
!! TGAATAAGTAAATTCAATTT+AGG - chr3_3:83603696-83603715 Msa0478740:intron 15.0%
!!! AATTTTATTCTTCTTTTACT+TGG + chr3_3:83603756-83603775 Msa0478730:intron 15.0%
!! AAGTAAAAGAAGAATAAAAT+TGG - chr3_3:83603755-83603774 Msa0478740:intron 15.0%
!! ATAAATATATAGCATTAAAG+AGG - chr3_3:83603991-83604010 Msa0478740:intron 15.0%
!! TATGAATTTACTTAAAAAGA+GGG + chr3_3:83604149-83604168 Msa0478730:CDS 15.0%
!! ATATGAATTTACTTAAAAAG+AGG + chr3_3:83604150-83604169 Msa0478730:CDS 15.0%
!!! TGAGAAATCTTAATTTTTTT+TGG - chr3_3:83604320-83604339 Msa0478740:three_prime_UTR 15.0%
!! TAAAAAATAGAGACTAAAAA+TGG - chr3_3:83604407-83604426 Msa0478740:three_prime_UTR 15.0%
!!! TATTTTTTTTTTTTATGCAC+AGG - chr3_3:83605746-83605765 Msa0478740:intron 15.0%
!!! TATATCAATAGAATTGTTTT+TGG - chr3_3:83606065-83606084 Msa0478740:intron 15.0%
!! AATACAATAATATAGAAAAG+TGG + chr3_3:83606093-83606112 None:intergenic 15.0%
!!! GAGAATTTTAAAAATTAGAA+AGG + chr3_3:83607619-83607638 None:intergenic 15.0%
!!! CTAATTTTTAAAATTCTCTT+TGG - chr3_3:83607621-83607640 Msa0478740:intron 15.0%
!! AATTATATGATGAAGAATAA+TGG + chr3_3:83608360-83608379 None:intergenic 15.0%
!! AGAAGATTAAAACAAAAAGT+TGG + chr3_3:83603574-83603593 Msa0478730:intron 20.0%
!! TCATTCATATATATGTTACT+TGG + chr3_3:83604057-83604076 Msa0478730:CDS 20.0%
!!! AAAAATTTAAAATTGGTGTG+AGG - chr3_3:83604076-83604095 Msa0478740:three_prime_UTR 20.0%
!!! AAAATTTAAAATTGGTGTGA+GGG - chr3_3:83604077-83604096 Msa0478740:three_prime_UTR 20.0%
!!! ATGGTGATTGAAAATTTTAT+AGG - chr3_3:83604426-83604445 Msa0478740:three_prime_UTR 20.0%
!!! TGAAAAGTTGGTATATTTAT+AGG - chr3_3:83604485-83604504 Msa0478740:three_prime_UTR 20.0%
!!! GAAAAGTTGGTATATTTATA+GGG - chr3_3:83604486-83604505 Msa0478740:three_prime_UTR 20.0%
!! ACATTGTTTCATATCTTATT+AGG - chr3_3:83605086-83605105 Msa0478740:intron 20.0%
!! CATTGTTTCATATCTTATTA+GGG - chr3_3:83605087-83605106 Msa0478740:intron 20.0%
!! TTGTTATCTATTAGACTTAA+TGG - chr3_3:83605642-83605661 Msa0478740:intron 20.0%
!! TGTTATCTATTAGACTTAAT+GGG - chr3_3:83605643-83605662 Msa0478740:intron 20.0%
!! TATAAGGAGAAAAATTTAGA+AGG - chr3_3:83606533-83606552 Msa0478740:intron 20.0%
!! ATAAGGAGAAAAATTTAGAA+GGG - chr3_3:83606534-83606553 Msa0478740:intron 20.0%
!!! AGAGTAGAAATTGATTTAAT+TGG + chr3_3:83606735-83606754 None:intergenic 20.0%
!! CTATTCTATAGATTAAACAT+TGG - chr3_3:83606862-83606881 Msa0478740:intron 20.0%
!! ATCAAAGGATATTAAAAAGA+GGG + chr3_3:83606988-83607007 None:intergenic 20.0%
!!! ATTTTCTTTATGCTATCATT+TGG - chr3_3:83607206-83607225 Msa0478740:intron 20.0%
!! TTTATGATTATCATCATTTC+TGG - chr3_3:83607303-83607322 Msa0478740:intron 20.0%
!!! ATTTCTAATTTGTTCTTTGT+TGG - chr3_3:83608081-83608100 Msa0478740:CDS 20.0%
!!! TTTCTAATTTGTTCTTTGTT+GGG - chr3_3:83608082-83608101 Msa0478740:CDS 20.0%
!!! TGAAGAAAGTTACATTTTTT+AGG - chr3_3:83608276-83608295 Msa0478740:CDS 20.0%
!!! GAAGAAAGTTACATTTTTTA+GGG - chr3_3:83608277-83608296 Msa0478740:CDS 20.0%
!! GAAAAATTATTTCATCAAGA+AGG - chr3_3:83608385-83608404 Msa0478740:intron 20.0%
!! ATTCTATTCCTAGTTAATTT+GGG + chr3_3:83609510-83609529 None:intergenic 20.0%
!! TATTCTATTCCTAGTTAATT+TGG + chr3_3:83609511-83609530 None:intergenic 20.0%
!! AAAAGATATCTTGTCTTAAA+AGG - chr3_3:83609545-83609564 Msa0478740:intron 20.0%
!!! GTCTTAAAAGGTTTTAAATA+CGG - chr3_3:83609557-83609576 Msa0478740:intron 20.0%
!!! TGCATGTTATTTATATATAG+AGG - chr3_3:83610248-83610267 Msa0478740:intron 20.0%
! AGTTGTACTAATTATGTTCA+AGG - chr3_3:83603169-83603188 Msa0478740:three_prime_UTR 25.0%
!! CATTTTCAATTTTCATGTGT+AGG + chr3_3:83603261-83603280 Msa0478730:CDS 25.0%
! CTACACATGAAAATTGAAAA+TGG - chr3_3:83603259-83603278 Msa0478740:three_prime_UTR 25.0%
!!! AAAAAGTTGGTATACTTGTA+AGG + chr3_3:83603561-83603580 Msa0478730:intron 25.0%
! ATTTAATTAGCGTACTCTAT+CGG - chr3_3:83603783-83603802 Msa0478740:intron 25.0%
!! TAATAGGGTAATGATCATTT+TGG + chr3_3:83603953-83603972 Msa0478730:intron 25.0%
! TGTAGTTTGATTCTTAGTTA+TGG + chr3_3:83604023-83604042 Msa0478730:intron 25.0%
!! TCATATATATGTTACTTGGT+TGG + chr3_3:83604053-83604072 Msa0478730:CDS 25.0%
! ATATGCATCTTTATATCTTC+AGG - chr3_3:83604265-83604284 Msa0478740:three_prime_UTR 25.0%
! TATGCATCTTTATATCTTCA+GGG - chr3_3:83604266-83604285 Msa0478740:three_prime_UTR 25.0%
! AAAAATGTAAATGGAAGCAA+AGG - chr3_3:83604544-83604563 Msa0478740:three_prime_UTR 25.0%
! ATGATTCAAAATACAGTAAC+AGG + chr3_3:83604885-83604904 Msa0478730:three_prime_UTR 25.0%
! AAAAACGGTAACAAAAGTTA+GGG + chr3_3:83604910-83604929 Msa0478730:three_prime_UTR 25.0%
! AATCAATGTCTTGCTAATTA+GGG - chr3_3:83605313-83605332 Msa0478740:intron 25.0%
!!! TTTTTTTTTAGGAGAGTGAA+TGG - chr3_3:83605464-83605483 Msa0478740:intron 25.0%
! TTATCTACCTTTCAATTGTT+TGG + chr3_3:83605553-83605572 None:intergenic 25.0%
! GTTATCTATTAGACTTAATG+GGG - chr3_3:83605644-83605663 Msa0478740:intron 25.0%
! CTTTGCTAGATAATCTTATA+AGG - chr3_3:83605847-83605866 Msa0478740:CDS 25.0%
! GAAATATTCAGTGTAAAGAA+AGG + chr3_3:83605936-83605955 None:intergenic 25.0%
! TTAATGTCAAAAACTCTTGA+TGG - chr3_3:83606282-83606301 Msa0478740:intron 25.0%
! TTGATAAAGAGAATGAAGTT+GGG + chr3_3:83606322-83606341 None:intergenic 25.0%
! ATTGATAAAGAGAATGAAGT+TGG + chr3_3:83606323-83606342 None:intergenic 25.0%
! TCTCTTTATCAATATGATGT+AGG - chr3_3:83606330-83606349 Msa0478740:intron 25.0%
!!! GATGGACTATTAACTATAAT+AGG + chr3_3:83606692-83606711 None:intergenic 25.0%
!!! ATAGTTCTTGTATTTTGAGA+TGG + chr3_3:83606710-83606729 None:intergenic 25.0%
! AGGGAAGTAAACAAAAAAAA+AGG + chr3_3:83606894-83606913 None:intergenic 25.0%
! TAGCACATAGGAAATTTAAA+GGG + chr3_3:83606913-83606932 None:intergenic 25.0%
! TTAGCACATAGGAAATTTAA+AGG + chr3_3:83606914-83606933 None:intergenic 25.0%
! CATCAAAGGATATTAAAAAG+AGG + chr3_3:83606989-83607008 None:intergenic 25.0%
!! AGTCATTCATTTGATAATCT+CGG + chr3_3:83607338-83607357 None:intergenic 25.0%
! TTATTTACAGTCAGATTTCA+AGG + chr3_3:83607464-83607483 None:intergenic 25.0%
! AAGTTAAGAGATAAGAAATC+AGG + chr3_3:83607590-83607609 None:intergenic 25.0%
! TGTATTAATACTTCTTCATC+TGG - chr3_3:83607834-83607853 Msa0478740:intron 25.0%
! ATTAAATGCATAGAAGACAT+AGG + chr3_3:83607999-83608018 None:intergenic 25.0%
! ATTTCTTGTATTTCTTTCCT+AGG - chr3_3:83608057-83608076 Msa0478740:CDS 25.0%
! AGAACAAATTAGAAATTCCT+AGG + chr3_3:83608077-83608096 None:intergenic 25.0%
!!! TTCTAATTTGTTCTTTGTTG+GGG - chr3_3:83608083-83608102 Msa0478740:CDS 25.0%
!!! TTGAAATGAGTTTTATGCAA+GGG + chr3_3:83608114-83608133 None:intergenic 25.0%
!!! TTTGAAATGAGTTTTATGCA+AGG + chr3_3:83608115-83608134 None:intergenic 25.0%
! AGTAAAGAACTTAAAGAATG+GGG + chr3_3:83608159-83608178 None:intergenic 25.0%
! CAGTAAAGAACTTAAAGAAT+GGG + chr3_3:83608160-83608179 None:intergenic 25.0%
! TCAGTAAAGAACTTAAAGAA+TGG + chr3_3:83608161-83608180 None:intergenic 25.0%
! TGATTAAACTGAGTTTGATT+TGG - chr3_3:83608183-83608202 Msa0478740:intron 25.0%
! AAATAAGGTTCGAATAACTT+AGG - chr3_3:83608411-83608430 Msa0478740:intron 25.0%
!!! TAGTCTTTTTCAATACAAGA+GGG + chr3_3:83608463-83608482 None:intergenic 25.0%
!!! ATAGTCTTTTTCAATACAAG+AGG + chr3_3:83608464-83608483 None:intergenic 25.0%
!! TATTCCAATTTTACAGTGAT+TGG + chr3_3:83608852-83608871 None:intergenic 25.0%
! GTAAAATTGGAATACTGAAT+TGG - chr3_3:83608858-83608877 Msa0478740:intron 25.0%
!! TAATTTGGGATGCAAATATT+TGG + chr3_3:83609496-83609515 None:intergenic 25.0%
! ATTGTGTGTTACACAAAATA+AGG - chr3_3:83610199-83610218 Msa0478740:intron 25.0%
! TTGTGTGTTACACAAAATAA+GGG - chr3_3:83610200-83610219 Msa0478740:intron 25.0%
ATGCATCTTTATATCTTCAG+GGG - chr3_3:83604267-83604286 Msa0478740:three_prime_UTR 30.0%
GAAAAACGGTAACAAAAGTT+AGG + chr3_3:83604911-83604930 Msa0478730:three_prime_UTR 30.0%
TTATTAGGGTCTGTTTGTTT+CGG - chr3_3:83605101-83605120 Msa0478740:intron 30.0%
CAATCAATGTCTTGCTAATT+AGG - chr3_3:83605312-83605331 Msa0478740:intron 30.0%
GGATGACATAATAGGATAAT+TGG - chr3_3:83605339-83605358 Msa0478740:intron 30.0%
AACCATACCAAACAATTGAA+AGG - chr3_3:83605543-83605562 Msa0478740:intron 30.0%
TACCTTTCAATTGTTTGGTA+TGG + chr3_3:83605548-83605567 None:intergenic 30.0%
!! TAACATTCTTTTGGGAAAAG+GGG + chr3_3:83605678-83605697 None:intergenic 30.0%
!! CTAACATTCTTTTGGGAAAA+GGG + chr3_3:83605679-83605698 None:intergenic 30.0%
! ACTTGAGCTAACATTCTTTT+GGG + chr3_3:83605686-83605705 None:intergenic 30.0%
AAGATTATCTAGCAAAGCTT+CGG + chr3_3:83605844-83605863 None:intergenic 30.0%
AGTGTAAAGAAAGGATTTGA+TGG + chr3_3:83605927-83605946 None:intergenic 30.0%
!!! TTCATTATTTTTAGTCCCTG+TGG - chr3_3:83605953-83605972 Msa0478740:intron 30.0%
TCTCAAATAGTGAAGATACT+TGG + chr3_3:83605981-83606000 None:intergenic 30.0%
GAAACCAAAGTTAATATGCT+CGG + chr3_3:83606260-83606279 None:intergenic 30.0%
ATCAATATGATGTAGGACAA+AGG - chr3_3:83606337-83606356 Msa0478740:intron 30.0%
TTAACACAAGATACAACACA+TGG - chr3_3:83606400-83606419 Msa0478740:intron 30.0%
TAACACAAGATACAACACAT+GGG - chr3_3:83606401-83606420 Msa0478740:intron 30.0%
!! CAGTTTTATCTAAGAGAACA+GGG + chr3_3:83606593-83606612 None:intergenic 30.0%
!! TCAGTTTTATCTAAGAGAAC+AGG + chr3_3:83606594-83606613 None:intergenic 30.0%
ATAAAACTGATTAGAGCATG+TGG - chr3_3:83606604-83606623 Msa0478740:intron 30.0%
TCACTAATTATCATTGTGGA+AGG + chr3_3:83606640-83606659 None:intergenic 30.0%
ACAATGATAATTAGTGAGAC+CGG - chr3_3:83606643-83606662 Msa0478740:intron 30.0%
TTCACCTTCAAAAGAAATTC+CGG + chr3_3:83606665-83606684 None:intergenic 30.0%
TACTTAAATTGAACCCTTCA+TGG - chr3_3:83606766-83606785 Msa0478740:intron 30.0%
GGATATTAAAAAGAGGGAAA+AGG + chr3_3:83606982-83607001 None:intergenic 30.0%
! ATGTCACGAAATTTGGTAAT+TGG + chr3_3:83607024-83607043 None:intergenic 30.0%
ATAATAGTGTCCAGGATAAT+TGG - chr3_3:83607157-83607176 Msa0478740:intron 30.0%
TAATAGTGTCCAGGATAATT+GGG - chr3_3:83607158-83607177 Msa0478740:intron 30.0%
ATTCTCAGAATAGTTTCTAC+AGG - chr3_3:83608017-83608036 Msa0478740:CDS 30.0%
!!! AAAGGCTATTTCTAGCTTTT+TGG - chr3_3:83608436-83608455 Msa0478740:CDS 30.0%
!!! AGTCTTTTTCAATACAAGAG+GGG + chr3_3:83608462-83608481 None:intergenic 30.0%
TATTGGCAAAAAATGCTAGA+CGG + chr3_3:83608493-83608512 None:intergenic 30.0%
!! AGCTTGTTGAAGAGATTTAA+TGG - chr3_3:83608736-83608755 Msa0478740:intron 30.0%
! GATTTAATGGATCATTCAAG+AGG - chr3_3:83608749-83608768 Msa0478740:intron 30.0%
CATGTAAAACTTTCACAGAT+TGG + chr3_3:83608796-83608815 None:intergenic 30.0%
CATAAGAGAAAATGATTGGA+TGG + chr3_3:83609064-83609083 None:intergenic 30.0%
CTGACATAAGAGAAAATGAT+TGG + chr3_3:83609068-83609087 None:intergenic 30.0%
!! ATATCGTTTGAGTTGCTTAA+AGG + chr3_3:83609223-83609242 None:intergenic 30.0%
ATTCTTGCAAAATTTGATGC+AGG + chr3_3:83609261-83609280 None:intergenic 30.0%
! ATCATTAGACAGGACAATTT+TGG + chr3_3:83609402-83609421 None:intergenic 30.0%
TAATGATTGTTTGGGAACTT+AGG - chr3_3:83609415-83609434 Msa0478740:intron 30.0%
ACAATTTAGTCGTGTCTAAA+AGG - chr3_3:83609462-83609481 Msa0478740:intron 30.0%
GATGCAAATATTTGGCAAAA+TGG + chr3_3:83609488-83609507 None:intergenic 30.0%
ATTTGCATCCCAAATTAACT+AGG - chr3_3:83609499-83609518 Msa0478740:intron 30.0%
!! AGTTTCTTGTGTGTTTTTGA+AGG - chr3_3:83609589-83609608 Msa0478740:intron 30.0%
! AGAAAATTGAAGACTTTTGG+GGG + chr3_3:83609624-83609643 None:intergenic 30.0%
! CAGAAAATTGAAGACTTTTG+GGG + chr3_3:83609625-83609644 None:intergenic 30.0%
! CCAGAAAATTGAAGACTTTT+GGG + chr3_3:83609626-83609645 None:intergenic 30.0%
! ACCAGAAAATTGAAGACTTT+TGG + chr3_3:83609627-83609646 None:intergenic 30.0%
! CTTTTCTCATCTTTTCATGA+AGG - chr3_3:83609948-83609967 Msa0478740:intron 30.0%
ATCATGTCTGATCAAGTAAA+TGG + chr3_3:83610181-83610200 None:intergenic 30.0%
ACACAAAATAAGGGATTAAG+AGG - chr3_3:83610209-83610228 Msa0478740:intron 30.0%
ATATATAGAGGAGCTTAAAG+AGG - chr3_3:83610260-83610279 Msa0478740:intron 30.0%
GCGAGTGATTAAATGAAAGA+GGG - chr3_3:83603484-83603503 Msa0478740:intron 35.0%
!! TCTTCACTTTTGATCAGTGA+CGG - chr3_3:83603633-83603652 Msa0478740:intron 35.0%
CCTCACTACTCAAATTTCTT+GGG + chr3_3:83603660-83603679 Msa0478730:intron 35.0%
CCAAGAAATTTGAGTAGTGA+GGG - chr3_3:83603658-83603677 Msa0478740:intron 35.0%
TTCTACACATACATCCAATG+AGG - chr3_3:83603816-83603835 Msa0478740:intron 35.0%
AAAAAGAGGGATCAAAAGCA+GGG + chr3_3:83604136-83604155 Msa0478730:CDS 35.0%
TAAAAAGAGGGATCAAAAGC+AGG + chr3_3:83604137-83604156 Msa0478730:CDS 35.0%
AAAATGTGAGAAGAGGAAAG+GGG + chr3_3:83604758-83604777 Msa0478730:three_prime_UTR 35.0%
GAAAATGTGAGAAGAGGAAA+GGG + chr3_3:83604759-83604778 Msa0478730:three_prime_UTR 35.0%
AGAAAATGTGAGAAGAGGAA+AGG + chr3_3:83604760-83604779 Msa0478730:three_prime_UTR 35.0%
!! TTTTGTTACCGTTTTTCAGC+AGG - chr3_3:83604914-83604933 Msa0478740:intron 35.0%
! TGTTCTTTTAGCCAATCCTT+TGG + chr3_3:83604941-83604960 Msa0478730:three_prime_UTR 35.0%
GATAAAGATAAACAGAGCGA+AGG + chr3_3:83605018-83605037 Msa0478730:three_prime_UTR 35.0%
ATGTCTTGCTAATTAGGGTT+TGG - chr3_3:83605318-83605337 Msa0478740:intron 35.0%
TAGGGTTTGGATGACATAAT+AGG - chr3_3:83605331-83605350 Msa0478740:intron 35.0%
CTGATGAGTGATTCGTTATA+TGG - chr3_3:83605423-83605442 Msa0478740:intron 35.0%
!! GCTAACATTCTTTTGGGAAA+AGG + chr3_3:83605680-83605699 None:intergenic 35.0%
! CACTTGAGCTAACATTCTTT+TGG + chr3_3:83605687-83605706 None:intergenic 35.0%
TGGACACTAATTAATGCAGT+AGG + chr3_3:83605907-83605926 None:intergenic 35.0%
TGCAAAGCAAATGATTGAAC+TGG - chr3_3:83606005-83606024 Msa0478740:intron 35.0%
!! TTTCAAGCATCTAGTTCTTC+AGG - chr3_3:83606218-83606237 Msa0478740:intron 35.0%
ATATGATGTAGGACAAAGGT+AGG - chr3_3:83606341-83606360 Msa0478740:intron 35.0%
! CATTTTCTCTCTTCTTCTCT+TGG + chr3_3:83606476-83606495 None:intergenic 35.0%
GAAACGAGTGAGAAATGAAA+TGG - chr3_3:83606495-83606514 Msa0478740:intron 35.0%
GAGTGAGAAATGAAATGGTA+AGG - chr3_3:83606500-83606519 Msa0478740:intron 35.0%
AGAAATGAAATGGTAAGGAG+TGG - chr3_3:83606505-83606524 Msa0478740:intron 35.0%
GTAAGGAGTGGCTATATATA+AGG - chr3_3:83606517-83606536 Msa0478740:intron 35.0%
GGTCTCACTAATTATCATTG+TGG + chr3_3:83606644-83606663 None:intergenic 35.0%
CGAATTATCACAACCATGAA+GGG + chr3_3:83606782-83606801 None:intergenic 35.0%
AATACACGAAGTTAGCACAT+AGG + chr3_3:83606925-83606944 None:intergenic 35.0%
!! TTGGTAATTGGCATGCATTT+TGG + chr3_3:83607012-83607031 None:intergenic 35.0%
CCAAATTTCGTGACATATGA+CGG - chr3_3:83607028-83607047 Msa0478740:intron 35.0%
ACATGAGAAATATGGGAAAC+AGG + chr3_3:83607060-83607079 None:intergenic 35.0%
GATCTGCACATGAGAAATAT+GGG + chr3_3:83607067-83607086 None:intergenic 35.0%
TGATCTGCACATGAGAAATA+TGG + chr3_3:83607068-83607087 None:intergenic 35.0%
AACCAACATTGAACTTGCAT+CGG - chr3_3:83607117-83607136 Msa0478740:intron 35.0%
TATCCTGGACACTATTATTC+AGG + chr3_3:83607155-83607174 None:intergenic 35.0%
AATAGTGTCCAGGATAATTG+GGG - chr3_3:83607159-83607178 Msa0478740:intron 35.0%
! CATTTGATAATCTCGGTTAG+AGG + chr3_3:83607331-83607350 None:intergenic 35.0%
CAAAATAGCAGATGCTGTAT+CGG - chr3_3:83607392-83607411 Msa0478740:intron 35.0%
ACAAATTTGAGCAGGGAATT+AGG - chr3_3:83607433-83607452 Msa0478740:CDS 35.0%
CAAATTTGAGCAGGGAATTA+GGG - chr3_3:83607434-83607453 Msa0478740:CDS 35.0%
!! ACCTGTTCAACTTTTTGAAG+TGG - chr3_3:83607483-83607502 Msa0478740:CDS 35.0%
TCCACTTCAAAAAGTTGAAC+AGG + chr3_3:83607487-83607506 None:intergenic 35.0%
!!! GTTCAACTTTTTGAAGTGGA+AGG - chr3_3:83607487-83607506 Msa0478740:CDS 35.0%
AATAATGCCAATCGTCAGTT+CGG + chr3_3:83607806-83607825 None:intergenic 35.0%
! ATCAAAATATGCTTTTGCCC+TGG - chr3_3:83607912-83607931 Msa0478740:intron 35.0%
GCAAGTAGATAACTTAACCA+GGG + chr3_3:83607932-83607951 None:intergenic 35.0%
AGCAAGTAGATAACTTAACC+AGG + chr3_3:83607933-83607952 None:intergenic 35.0%
AAGAACTTAAAGAATGGGGT+TGG + chr3_3:83608155-83608174 None:intergenic 35.0%
!! ACGTGTTTTTGAACTGGTTT+GGG - chr3_3:83608222-83608241 Msa0478740:intron 35.0%
TCATCAAGAAGGCGAAAATA+AGG - chr3_3:83608396-83608415 Msa0478740:intron 35.0%
GTTCGAATAACTTAGGTCAA+AGG - chr3_3:83608418-83608437 Msa0478740:intron 35.0%
ATTGGCAAAAAATGCTAGAC+GGG + chr3_3:83608492-83608511 None:intergenic 35.0%
CTGTACAATTGCTACACTAT+TGG + chr3_3:83608510-83608529 None:intergenic 35.0%
CAATAGTGTAGCAATTGTAC+AGG - chr3_3:83608508-83608527 Msa0478740:CDS 35.0%
! CTGATTCGTAGAATAGAACA+TGG + chr3_3:83608587-83608606 None:intergenic 35.0%
CATGTTCTATTCTACGAATC+AGG - chr3_3:83608585-83608604 Msa0478740:intron 35.0%
ATAATAAGGAGTCGGTCATT+CGG + chr3_3:83608612-83608631 None:intergenic 35.0%
TCAAAGTTCTGCGCATAATA+AGG + chr3_3:83608626-83608645 None:intergenic 35.0%
ATTATGCGCAGAACTTTGAT+CGG - chr3_3:83608627-83608646 Msa0478740:intron 35.0%
TTACAAACCAATCCAGATGA+CGG + chr3_3:83608697-83608716 None:intergenic 35.0%
AGCCAATAGATGGTAAAAGT+TGG - chr3_3:83608821-83608840 Msa0478740:intron 35.0%
! GACCAACTTTTACCATCTAT+TGG + chr3_3:83608826-83608845 None:intergenic 35.0%
! ATAGATGGTAAAAGTTGGTC+TGG - chr3_3:83608826-83608845 Msa0478740:intron 35.0%
ACTTATTCATGAAGTCTGCT+AGG - chr3_3:83608896-83608915 Msa0478740:intron 35.0%
CAATTGTGTCTTAACTCACA+CGG + chr3_3:83608926-83608945 None:intergenic 35.0%
TAAAATTCTCAGCAGTTGCA+TGG - chr3_3:83608951-83608970 Msa0478740:intron 35.0%
ATGGAAAAGCTTCAAATTGC+AGG + chr3_3:83609045-83609064 None:intergenic 35.0%
TGCAAAATTTGATGCAGGAA+TGG + chr3_3:83609256-83609275 None:intergenic 35.0%
!!! AGGACAATTTTGGAACCTTT+TGG + chr3_3:83609392-83609411 None:intergenic 35.0%
TGTCCTGTCTAATGATTGTT+TGG - chr3_3:83609406-83609425 Msa0478740:intron 35.0%
GTCCTGTCTAATGATTGTTT+GGG - chr3_3:83609407-83609426 Msa0478740:intron 35.0%
TTCCCAAACAATCATTAGAC+AGG + chr3_3:83609412-83609431 None:intergenic 35.0%
! TGTAACAGCACATTTTAGAC+AGG + chr3_3:83609445-83609464 None:intergenic 35.0%
! CCCAAAAGTCTTCAATTTTC+TGG - chr3_3:83609623-83609642 Msa0478740:intron 35.0%
ATAGTTATCAGAAGCTAACG+CGG + chr3_3:83609681-83609700 None:intergenic 35.0%
CGCAACAATTGAAAAGGAAT+GGG + chr3_3:83610083-83610102 None:intergenic 35.0%
ACGCAACAATTGAAAAGGAA+TGG + chr3_3:83610084-83610103 None:intergenic 35.0%
! ATTCCTTTTCAATTGTTGCG+TGG - chr3_3:83610083-83610102 Msa0478740:intron 35.0%
GGCGAGTGATTAAATGAAAG+AGG - chr3_3:83603483-83603502 Msa0478740:intron 40.0%
CCCAAGAAATTTGAGTAGTG+AGG - chr3_3:83603657-83603676 Msa0478740:intron 40.0%
CCCTCACTACTCAAATTTCT+TGG + chr3_3:83603661-83603680 Msa0478730:intron 40.0%
! CTTTTATAGCAGCACCTCAT+TGG + chr3_3:83603833-83603852 Msa0478730:intron 40.0%
AACCACATAGAGAGCTATGT+GGG + chr3_3:83604109-83604128 Msa0478730:CDS 40.0%
TTGCTTTGCCTTATCTTTCG+CGG + chr3_3:83604631-83604650 Msa0478730:CDS 40.0%
CTTACAGATGCCAATGTCAA+TGG + chr3_3:83604837-83604856 Msa0478730:three_prime_UTR 40.0%
CGAAAGAATTCCTATCCTCT+GGG + chr3_3:83605219-83605238 None:intergenic 40.0%
ACGAAAGAATTCCTATCCTC+TGG + chr3_3:83605220-83605239 None:intergenic 40.0%
ACAAAGACAAACCTCAACTC+CGG + chr3_3:83605260-83605279 None:intergenic 40.0%
ATCCTTCTTTCCAAGTAAGG+AGG + chr3_3:83605805-83605824 None:intergenic 40.0%
AGGATCCTTCTTTCCAAGTA+AGG + chr3_3:83605808-83605827 None:intergenic 40.0%
AACACATAGATGCTGGAAAG+TGG + chr3_3:83605876-83605895 None:intergenic 40.0%
CACTAATTAATGCAGTAGGC+AGG + chr3_3:83605903-83605922 None:intergenic 40.0%
TGAAGATACTTGGAACCACA+GGG + chr3_3:83605971-83605990 None:intergenic 40.0%
CATGCCGAGCATATTAACTT+TGG - chr3_3:83606253-83606272 Msa0478740:intron 40.0%
ATTAGAGCATGTGGTAACAG+TGG - chr3_3:83606613-83606632 Msa0478740:intron 40.0%
TTAGAGCATGTGGTAACAGT+GGG - chr3_3:83606614-83606633 Msa0478740:intron 40.0%
! GAGACCGGAATTTCTTTTGA+AGG - chr3_3:83606658-83606677 Msa0478740:intron 40.0%
GCGAATTATCACAACCATGA+AGG + chr3_3:83606783-83606802 None:intergenic 40.0%
TCATGGTTGTGATAATTCGC+TGG - chr3_3:83606783-83606802 Msa0478740:intron 40.0%
! GAGAGTGCAGATAATGCTTT+AGG + chr3_3:83606954-83606973 None:intergenic 40.0%
CCGTCATATGTCACGAAATT+TGG + chr3_3:83607031-83607050 None:intergenic 40.0%
ATCCGATGCAAGTTCAATGT+TGG + chr3_3:83607122-83607141 None:intergenic 40.0%
ACATTGAACTTGCATCGGAT+AGG - chr3_3:83607122-83607141 Msa0478740:intron 40.0%
TCTCCTGAATAATAGTGTCC+AGG - chr3_3:83607149-83607168 Msa0478740:intron 40.0%
CTAGTATACCCCAATTATCC+TGG + chr3_3:83607170-83607189 None:intergenic 40.0%
CAGGATAATTGGGGTATACT+AGG - chr3_3:83607168-83607187 Msa0478740:intron 40.0%
CGCAAAAAGGACAACAATAC+AGG + chr3_3:83607244-83607263 None:intergenic 40.0%
GAATAAAGCGAGACGCAAAA+AGG + chr3_3:83607257-83607276 None:intergenic 40.0%
ATCTCTCGACAAATTTGAGC+AGG - chr3_3:83607425-83607444 Msa0478740:CDS 40.0%
TCTCTCGACAAATTTGAGCA+GGG - chr3_3:83607426-83607445 Msa0478740:CDS 40.0%
GTCATTTAAGTACGTGCTTC+TGG - chr3_3:83607524-83607543 Msa0478740:intron 40.0%
TGATATTCAGCTAAGTGACG+TGG + chr3_3:83607753-83607772 None:intergenic 40.0%
TCTTCATCTGGATAATCCTC+TGG - chr3_3:83607846-83607865 Msa0478740:intron 40.0%
!! GAGTAGACGTGTTTTTGAAC+TGG - chr3_3:83608216-83608235 Msa0478740:intron 40.0%
!! GACGTGTTTTTGAACTGGTT+TGG - chr3_3:83608221-83608240 Msa0478740:intron 40.0%
!!! TGTTTTTGAACTGGTTTGGG+TGG - chr3_3:83608225-83608244 Msa0478740:intron 40.0%
TTGGCAAAAAATGCTAGACG+GGG + chr3_3:83608491-83608510 None:intergenic 40.0%
ATTGTACAGGTGACAACACA+TGG - chr3_3:83608521-83608540 Msa0478740:CDS 40.0%
TTCTGCGCATAATAAGGAGT+CGG + chr3_3:83608620-83608639 None:intergenic 40.0%
TTATGCGCAGAACTTTGATC+GGG - chr3_3:83608628-83608647 Msa0478740:intron 40.0%
!! GGATTGGTTTGTAATGACCT+AGG - chr3_3:83608703-83608722 Msa0478740:intron 40.0%
ATCATTCAAGAGGCCGAAAT+GGG - chr3_3:83608759-83608778 Msa0478740:intron 40.0%
ACATGTGTGAAGCCAATAGA+TGG - chr3_3:83608811-83608830 Msa0478740:intron 40.0%
CTGGCCAATCACTGTAAAAT+TGG - chr3_3:83608845-83608864 Msa0478740:intron 40.0%
GAATACTGAATTGGATAGCG+TGG - chr3_3:83608867-83608886 Msa0478740:intron 40.0%
TTTCTTACCACAGAAGAGCA+CGG + chr3_3:83609022-83609041 None:intergenic 40.0%
! TCTGGTTAAGGATTTGGCTT+TGG - chr3_3:83609095-83609114 Msa0478740:intron 40.0%
! CAGTGATTATGATTAGCTGC+TGG - chr3_3:83609350-83609369 Msa0478740:intron 40.0%
!!! TTCTGGTCTACTGCTGTTTT+TGG - chr3_3:83609640-83609659 Msa0478740:intron 40.0%
!!! TCTGGTCTACTGCTGTTTTT+GGG - chr3_3:83609641-83609660 Msa0478740:intron 40.0%
!! GCTTTGGTTTGATTCTAGAC+TGG + chr3_3:83609876-83609895 None:intergenic 40.0%
AACAATGCTCGTGAAACTTC+TGG + chr3_3:83609920-83609939 None:intergenic 40.0%
AGGAATGGGATTTCCTTCAA+AGG + chr3_3:83610069-83610088 None:intergenic 40.0%
CAGTATGTAACAAGTCTGGA+AGG - chr3_3:83610122-83610141 Msa0478740:intron 40.0%
GGATTAAGAGGTTTGTGAAG+AGG - chr3_3:83610221-83610240 Msa0478740:intron 40.0%
TAGAGGAGCTTAAAGAGGTT+TGG - chr3_3:83610265-83610284 Msa0478740:intron 40.0%
AGAGGAGCTTAAAGAGGTTT+GGG - chr3_3:83610266-83610285 Msa0478740:intron 40.0%
TAAAATTGGTGTGAGGGCCT+TGG - chr3_3:83604083-83604102 Msa0478740:three_prime_UTR 45.0%
GAACCACATAGAGAGCTATG+TGG + chr3_3:83604110-83604129 Msa0478730:CDS 45.0%
! AATGGAAGCAAAGGCATAGC+AGG - chr3_3:83604553-83604572 Msa0478740:three_prime_UTR 45.0%
CATAGCAGGAGTTAGGACTT+AGG - chr3_3:83604567-83604586 Msa0478740:three_prime_UTR 45.0%
TTCGCGGTGTGTTTCTCTTT+CGG + chr3_3:83604615-83604634 Msa0478730:CDS 45.0%
GAAACACACCGCGAAAGATA+AGG - chr3_3:83604620-83604639 Msa0478740:three_prime_UTR 45.0%
GAAACTGTAGCTGCTGGTAA+CGG + chr3_3:83604671-83604690 Msa0478730:exon 45.0%
!!! AAGGTTACGTTTTGGAGGGA+GGG + chr3_3:83604735-83604754 Msa0478730:three_prime_UTR 45.0%
! GAAAGGGGAAGGTTACGTTT+TGG + chr3_3:83604743-83604762 Msa0478730:three_prime_UTR 45.0%
GCGAGAGAAAATGTGAGAAG+AGG + chr3_3:83604765-83604784 Msa0478730:three_prime_UTR 45.0%
ACAGATGCCAATGTCAATGG+CGG + chr3_3:83604834-83604853 Msa0478730:three_prime_UTR 45.0%
CCTTTGGTCCTGCTGAAAAA+CGG + chr3_3:83604925-83604944 Msa0478730:three_prime_UTR 45.0%
TTTCAGCAGGACCAAAGGAT+TGG - chr3_3:83604927-83604946 Msa0478740:intron 45.0%
GACAGGAGCAAGTAGAAACT+TGG + chr3_3:83604978-83604997 Msa0478730:three_prime_UTR 45.0%
GTAGCTTTCCAAGCTAACAC+CGG - chr3_3:83605238-83605257 Msa0478740:intron 45.0%
TTAGACGAGAGAAGCTGAGA+AGG - chr3_3:83605501-83605520 Msa0478740:intron 45.0%
AATCCCTACCCTGAATTGAG+TGG - chr3_3:83605571-83605590 Msa0478740:intron 45.0%
ATCCCTACCCTGAATTGAGT+GGG - chr3_3:83605572-83605591 Msa0478740:intron 45.0%
ATCAGTCCCCACTCAATTCA+GGG + chr3_3:83605582-83605601 None:intergenic 45.0%
TATCAGTCCCCACTCAATTC+AGG + chr3_3:83605583-83605602 None:intergenic 45.0%
ATGCACAGGTGTGCACATTT+CGG - chr3_3:83605760-83605779 Msa0478740:three_prime_UTR 45.0%
AAGAATGCAGCCTCCTTACT+TGG - chr3_3:83605792-83605811 Msa0478740:exon 45.0%
AGCCTCCTTACTTGGAAAGA+AGG - chr3_3:83605800-83605819 Msa0478740:exon 45.0%
AGGCTACAACACATAGATGC+TGG + chr3_3:83605883-83605902 None:intergenic 45.0%
GTGAAGATACTTGGAACCAC+AGG + chr3_3:83605972-83605991 None:intergenic 45.0%
GGTTATCCTTCTCCAGTAGA+AGG - chr3_3:83606422-83606441 Msa0478740:intron 45.0%
TATCCTTCTCCAGTAGAAGG+AGG - chr3_3:83606425-83606444 Msa0478740:intron 45.0%
TTGTGACTTCCTCCTTCTAC+TGG + chr3_3:83606437-83606456 None:intergenic 45.0%
GAGAACAGGGACAAAACACT+TGG + chr3_3:83606580-83606599 None:intergenic 45.0%
!! GGCATGCATTTTGGCATCAA+AGG + chr3_3:83607003-83607022 None:intergenic 45.0%
AGATCATTCGCCTCTATCAG+TGG - chr3_3:83607082-83607101 Msa0478740:intron 45.0%
GATCATTCGCCTCTATCAGT+GGG - chr3_3:83607083-83607102 Msa0478740:intron 45.0%
AAGTGAGGTGGCTCAATTCA+GGG + chr3_3:83607782-83607801 None:intergenic 45.0%
AAAAATTGCGCTCTCACCAG+AGG + chr3_3:83607865-83607884 None:intergenic 45.0%
! TTGTACTTGGTGGAAGCTTC+TGG + chr3_3:83608658-83608677 None:intergenic 45.0%
GTAATGACCTAGGCAAGTTG+CGG - chr3_3:83608713-83608732 Msa0478740:intron 45.0%
GATCATTCAAGAGGCCGAAA+TGG - chr3_3:83608758-83608777 Msa0478740:intron 45.0%
TGCCACTCTGGTTAAGGATT+TGG - chr3_3:83609089-83609108 Msa0478740:intron 45.0%
AGCCAAATCCTTAACCAGAG+TGG + chr3_3:83609094-83609113 None:intergenic 45.0%
CACTATTCTGCAAGCAGCTA+AGG + chr3_3:83609151-83609170 None:intergenic 45.0%
TGACTTTGCAGAAGTCTTGG+AGG + chr3_3:83609181-83609200 None:intergenic 45.0%
! GGTTGACTTTGCAGAAGTCT+TGG + chr3_3:83609184-83609203 None:intergenic 45.0%
AAAGGACAGCGATGTCTTTG+AGG + chr3_3:83609205-83609224 None:intergenic 45.0%
! CAGACTGGCTGTAATCCAAA+AGG - chr3_3:83609374-83609393 Msa0478740:intron 45.0%
TTATCAGAAGCTAACGCGGA+TGG + chr3_3:83609677-83609696 None:intergenic 45.0%
! ACCAAAGCGTTCTAACTGCA+AGG - chr3_3:83609888-83609907 Msa0478740:intron 45.0%
TCCTTGCAGTTAGAACGCTT+TGG + chr3_3:83609892-83609911 None:intergenic 45.0%
TCAAAGGTCAGCTTGCCAAA+CGG + chr3_3:83610053-83610072 None:intergenic 45.0%
TTTGGCAAGCTGACCTTTGA+AGG - chr3_3:83610053-83610072 Msa0478740:intron 45.0%
GGTCCACGCAACAATTGAAA+AGG + chr3_3:83610089-83610108 None:intergenic 45.0%
GGGTCAGTATGTAACAAGTC+TGG - chr3_3:83610118-83610137 Msa0478740:intron 45.0%
! AAGTCTGGAAGGTTTAGCTC+TGG - chr3_3:83610133-83610152 Msa0478740:intron 45.0%
GAGGAGCTTAAAGAGGTTTG+GGG - chr3_3:83610267-83610286 Msa0478740:intron 45.0%
! AGCTTAAAGAGGTTTGGGGT+TGG - chr3_3:83610271-83610290 Msa0478740:intron 45.0%
!!! AATAATAAAATATTTTTTTG+AGG - chr3_3:83603018-83603037 Msa0478740:three_prime_UTR 5.0%
!!! ATAATAAAATATTTTTTTGA+GGG - chr3_3:83603019-83603038 Msa0478740:three_prime_UTR 5.0%
!! GTATAATAAAATATAATAAT+AGG + chr3_3:83603969-83603988 Msa0478730:intron 5.0%
!! ATAAAAGTTTATAATATTAT+AGG - chr3_3:83604201-83604220 Msa0478740:three_prime_UTR 5.0%
!! TATTAAAAAAAAAATGTAAA+TGG - chr3_3:83604535-83604554 Msa0478740:three_prime_UTR 5.0%
!!! TTATCATTATTTTTTTTTTT+AGG - chr3_3:83605453-83605472 Msa0478740:intron 5.0%
ATAGAGAGCTATGTGGGCCA+AGG + chr3_3:83604103-83604122 Msa0478730:CDS 50.0%
AGAGGGATCAAAAGCAGGGA+CGG + chr3_3:83604132-83604151 Msa0478730:CDS 50.0%
! GCAAAGGCATAGCAGGAGTT+AGG - chr3_3:83604560-83604579 Msa0478740:three_prime_UTR 50.0%
! GGTGTGTTTCTCTTTCGGGT+CGG + chr3_3:83604610-83604629 Msa0478730:CDS 50.0%
TCGCGGTGTGTTTCTCTTTC+GGG + chr3_3:83604614-83604633 Msa0478730:CDS 50.0%
AGAGCAGAAACTGTAGCTGC+TGG + chr3_3:83604677-83604696 Msa0478730:exon 50.0%
!!! GAAGGTTACGTTTTGGAGGG+AGG + chr3_3:83604736-83604755 Msa0478730:three_prime_UTR 50.0%
!! GGGGAAGGTTACGTTTTGGA+GGG + chr3_3:83604739-83604758 Msa0478730:three_prime_UTR 50.0%
! AGGGGAAGGTTACGTTTTGG+AGG + chr3_3:83604740-83604759 Msa0478730:three_prime_UTR 50.0%
TGTGAGAAGAGGAAAGGGGA+AGG + chr3_3:83604754-83604773 Msa0478730:three_prime_UTR 50.0%
!! CCGTTTTTCAGCAGGACCAA+AGG - chr3_3:83604922-83604941 Msa0478740:intron 50.0%
! GTTTCGGTTCCTTTTCCCAG+CGG - chr3_3:83605117-83605136 Msa0478740:intron 50.0%
! TTCCTTTTCCCAGCGGAAAC+TGG - chr3_3:83605124-83605143 Msa0478740:intron 50.0%
AAGTAGCACCAGTTTCCGCT+GGG + chr3_3:83605135-83605154 None:intergenic 50.0%
TAAGTAGCACCAGTTTCCGC+TGG + chr3_3:83605136-83605155 None:intergenic 50.0%
AGCTATTCAGATCTGCTGCC+AGG - chr3_3:83605185-83605204 Msa0478740:intron 50.0%
GCTATTCAGATCTGCTGCCA+GGG - chr3_3:83605186-83605205 Msa0478740:intron 50.0%
CGAGAGAAGCTGAGAAGGTT+TGG - chr3_3:83605506-83605525 Msa0478740:intron 50.0%
TCCCTACCCTGAATTGAGTG+GGG - chr3_3:83605573-83605592 Msa0478740:intron 50.0%
TCCCCACTCAATTCAGGGTA+GGG + chr3_3:83605577-83605596 None:intergenic 50.0%
GCTTCGGCTTCTAACTTCAC+AGG + chr3_3:83605828-83605847 None:intergenic 50.0%
CTTCCTCCTTCTACTGGAGA+AGG + chr3_3:83606431-83606450 None:intergenic 50.0%
ATTTGCCAGCCCACTGATAG+AGG + chr3_3:83607095-83607114 None:intergenic 50.0%
TTGGCAATACTGCCCTAACG+TGG - chr3_3:83607640-83607659 Msa0478740:intron 50.0%
CAATACTGCCCTAACGTGGA+AGG - chr3_3:83607644-83607663 Msa0478740:intron 50.0%
AGTGCCAACCTTCCACGTTA+GGG + chr3_3:83607655-83607674 None:intergenic 50.0%
AAGTGCCAACCTTCCACGTT+AGG + chr3_3:83607656-83607675 None:intergenic 50.0%
TAACGTGGAAGGTTGGCACT+TGG - chr3_3:83607655-83607674 Msa0478740:intron 50.0%
CAAGTGAGGTGGCTCAATTC+AGG + chr3_3:83607783-83607802 None:intergenic 50.0%
AATCGTCAGTTCGGCAAGTG+AGG + chr3_3:83607797-83607816 None:intergenic 50.0%
TCACTTGCCGAACTGACGAT+TGG - chr3_3:83607796-83607815 Msa0478740:intron 50.0%
! ATGCTGTCGCTTGTACTTGG+TGG + chr3_3:83608668-83608687 None:intergenic 50.0%
ACCAAGTACAAGCGACAGCA+TGG - chr3_3:83608667-83608686 Msa0478740:intron 50.0%
! ACCATGCTGTCGCTTGTACT+TGG + chr3_3:83608671-83608690 None:intergenic 50.0%
TGGTGTTCCGTCATCTGGAT+TGG - chr3_3:83608687-83608706 Msa0478740:intron 50.0%
! CAGTTGCATGGCGTTGGATT+GGG - chr3_3:83608963-83608982 Msa0478740:intron 50.0%
! TGGATTGGGCGAGGTAGTAT+AGG - chr3_3:83608977-83608996 Msa0478740:intron 50.0%
AGCACGGTCTGGATTCTAGA+AGG + chr3_3:83609006-83609025 None:intergenic 50.0%
TCTTATGTCAGCTGCCACTC+TGG - chr3_3:83609077-83609096 Msa0478740:intron 50.0%
! TGATTAGCTGCTGGTCAGAC+TGG - chr3_3:83609359-83609378 Msa0478740:intron 50.0%
GTGTCTACAAACCTGCACCT+AGG - chr3_3:83609804-83609823 Msa0478740:intron 50.0%
GAAGCACAGGTTGTTCTCCT+AGG + chr3_3:83609824-83609843 None:intergenic 50.0%
ACCTGTGCTTCTCTGCCATT+CGG - chr3_3:83609833-83609852 Msa0478740:intron 50.0%
GATGTTCTCAGTTCCCCGAA+TGG + chr3_3:83609851-83609870 None:intergenic 50.0%
!! TGATCCACTTGCTGCTTTGC+TGG + chr3_3:83609996-83610015 None:intergenic 50.0%
GCAAAGCAGCAAGTGGATCA+TGG - chr3_3:83609996-83610015 Msa0478740:intron 50.0%
ACATACTGACCCTGTTCGAC+AGG + chr3_3:83610110-83610129 None:intergenic 50.0%
GCTTGCAAGACAACCAAGCA+TGG + chr3_3:83610159-83610178 None:intergenic 50.0%
GGCCCACATAGCTCTCTATG+TGG - chr3_3:83604104-83604123 Msa0478740:three_prime_UTR 55.0%
GAGGGAAAATTGCGTGGTGG+CGG + chr3_3:83604717-83604736 Msa0478730:three_prime_UTR 55.0%
AGGGAGGGAAAATTGCGTGG+TGG + chr3_3:83604720-83604739 Msa0478730:three_prime_UTR 55.0%
TGGAGGGAGGGAAAATTGCG+TGG + chr3_3:83604723-83604742 Msa0478730:three_prime_UTR 55.0%
GATGCCAATGTCAATGGCGG+AGG + chr3_3:83604831-83604850 Msa0478730:three_prime_UTR 55.0%
!! CTTTCACGAGAGGCATCGAC+AGG + chr3_3:83604995-83605014 Msa0478730:three_prime_UTR 55.0%
AGAGCGAAGGCTTTCACGAG+AGG + chr3_3:83605005-83605024 Msa0478730:three_prime_UTR 55.0%
CACCAGTTTCCGCTGGGAAA+AGG + chr3_3:83605129-83605148 None:intergenic 55.0%
!! ATCCTCTGGGACACAATCCC+TGG + chr3_3:83605206-83605225 None:intergenic 55.0%
GGGATTGTGTCCCAGAGGAT+AGG - chr3_3:83605206-83605225 Msa0478740:intron 55.0%
! CCTCAACTCCGGTGTTAGCT+TGG + chr3_3:83605249-83605268 None:intergenic 55.0%
CCAAGCTAACACCGGAGTTG+AGG - chr3_3:83605246-83605265 Msa0478740:intron 55.0%
GTCCCCACTCAATTCAGGGT+AGG + chr3_3:83605578-83605597 None:intergenic 55.0%
CACTTGGCCACTTGTCGTAG+AGG + chr3_3:83606564-83606583 None:intergenic 55.0%
ATTCGCCTCTATCAGTGGGC+TGG - chr3_3:83607087-83607106 Msa0478740:intron 55.0%
ACTGCCCTAACGTGGAAGGT+TGG - chr3_3:83607648-83607667 Msa0478740:intron 55.0%
CAGCATGGTGTTCCGTCATC+TGG - chr3_3:83608682-83608701 Msa0478740:intron 55.0%
ACAAGCTCCGCAACTTGCCT+AGG + chr3_3:83608723-83608742 None:intergenic 55.0%
AAGAGGCCGAAATGGGCATC+TGG - chr3_3:83608766-83608785 Msa0478740:intron 55.0%
AGAGGCCGAAATGGGCATCT+GGG - chr3_3:83608767-83608786 Msa0478740:intron 55.0%
GGAGACCCAGATGCCCATTT+CGG + chr3_3:83608775-83608794 None:intergenic 55.0%
TCTCAGCAGTTGCATGGCGT+TGG - chr3_3:83608957-83608976 Msa0478740:intron 55.0%
! GCAGTTGCATGGCGTTGGAT+TGG - chr3_3:83608962-83608981 Msa0478740:intron 55.0%
ATCCAGACCGTGCTCTTCTG+TGG - chr3_3:83609012-83609031 Msa0478740:intron 55.0%
! TACCACAGAAGAGCACGGTC+TGG + chr3_3:83609017-83609036 None:intergenic 55.0%
GTCAGCTGCCACTCTGGTTA+AGG - chr3_3:83609083-83609102 Msa0478740:intron 55.0%
CAGGTTGTTCTCCTAGGTGC+AGG + chr3_3:83609818-83609837 None:intergenic 55.0%
CCTGTGCTTCTCTGCCATTC+GGG - chr3_3:83609834-83609853 Msa0478740:intron 55.0%
CTGTGCTTCTCTGCCATTCG+GGG - chr3_3:83609835-83609854 Msa0478740:intron 55.0%
!! ACTTGCTGCTTTGCTGGCAG+GGG + chr3_3:83609990-83610009 None:intergenic 55.0%
!! CACTTGCTGCTTTGCTGGCA+GGG + chr3_3:83609991-83610010 None:intergenic 55.0%
TTGCCAAACGGCTGCAGGAA+GGG + chr3_3:83610041-83610060 None:intergenic 55.0%
TTGCGTGGACCTGTCGAACA+GGG - chr3_3:83610098-83610117 Msa0478740:intron 55.0%
!! GGTTTAGCTCTGGCCATGCT+TGG - chr3_3:83610143-83610162 Msa0478740:intron 55.0%
!! GGAAAATTGCGTGGTGGCGG+TGG + chr3_3:83604714-83604733 Msa0478730:three_prime_UTR 60.0%
! CCAATGTCAATGGCGGAGGC+AGG + chr3_3:83604827-83604846 Msa0478730:three_prime_UTR 60.0%
CCTGCCTCCGCCATTGACAT+TGG - chr3_3:83604824-83604843 Msa0478740:intron 60.0%
TGCCAGGGATTGTGTCCCAG+AGG - chr3_3:83605201-83605220 Msa0478740:intron 60.0%
GGGAGAGCCTCTACGACAAG+TGG - chr3_3:83606554-83606573 Msa0478740:intron 60.0%
CGTCAGTTCGGCAAGTGAGG+TGG + chr3_3:83607794-83607813 None:intergenic 60.0%
! CCCGAATGGCAGAGAAGCAC+AGG + chr3_3:83609837-83609856 None:intergenic 60.0%
!! CCACTTGCTGCTTTGCTGGC+AGG + chr3_3:83609992-83610011 None:intergenic 60.0%
CCTGCCAGCAAAGCAGCAAG+TGG - chr3_3:83609989-83610008 Msa0478740:intron 60.0%
TAGCCCTTCCTGCAGCCGTT+TGG - chr3_3:83610035-83610054 Msa0478740:intron 60.0%
CTTGCCAAACGGCTGCAGGA+AGG + chr3_3:83610042-83610061 None:intergenic 60.0%
TCAGCTTGCCAAACGGCTGC+AGG + chr3_3:83610046-83610065 None:intergenic 60.0%
GTTGCGTGGACCTGTCGAAC+AGG - chr3_3:83610097-83610116 Msa0478740:intron 60.0%
! GCATGGCGTTGGATTGGGCG+AGG - chr3_3:83608968-83608987 Msa0478740:intron 65.0%
CGGCTGCAGGAAGGGCTATG+TGG + chr3_3:83610033-83610052 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 83602989 83610294 83602989 ID=Msa0478740;Name=Msa0478740
chr3_3 mRNA 83602989 83610294 83602989 ID=Msa0478740-mRNA-1;Parent=Msa0478740;Name=Msa0478740-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.87|0.77|0.88|0.62|0.44|9|1159|219
chr3_3 exon 83602989 83603465 83602989 ID=Msa0478740-mRNA-1:exon:23604;Parent=Msa0478740-mRNA-1
chr3_3 exon 83604023 83604645 83604023 ID=Msa0478740-mRNA-1:exon:23603;Parent=Msa0478740-mRNA-1
chr3_3 exon 83605751 83605894 83605751 ID=Msa0478740-mRNA-1:exon:23602;Parent=Msa0478740-mRNA-1
chr3_3 exon 83606140 83606199 83606140 ID=Msa0478740-mRNA-1:exon:23601;Parent=Msa0478740-mRNA-1
chr3_3 exon 83607415 83607515 83607415 ID=Msa0478740-mRNA-1:exon:23600;Parent=Msa0478740-mRNA-1
chr3_3 exon 83608016 83608146 83608016 ID=Msa0478740-mRNA-1:exon:23599;Parent=Msa0478740-mRNA-1
chr3_3 exon 83608243 83608350 83608243 ID=Msa0478740-mRNA-1:exon:23598;Parent=Msa0478740-mRNA-1
chr3_3 exon 83608432 83608602 83608432 ID=Msa0478740-mRNA-1:exon:23597;Parent=Msa0478740-mRNA-1
chr3_3 exon 83610291 83610294 83610291 ID=Msa0478740-mRNA-1:exon:23596;Parent=Msa0478740-mRNA-1
chr3_3 CDS 83610291 83610294 83610291 ID=Msa0478740-mRNA-1:cds;Parent=Msa0478740-mRNA-1
chr3_3 CDS 83608432 83608602 83608432 ID=Msa0478740-mRNA-1:cds;Parent=Msa0478740-mRNA-1
chr3_3 CDS 83608243 83608350 83608243 ID=Msa0478740-mRNA-1:cds;Parent=Msa0478740-mRNA-1
chr3_3 CDS 83608016 83608146 83608016 ID=Msa0478740-mRNA-1:cds;Parent=Msa0478740-mRNA-1
chr3_3 CDS 83607415 83607515 83607415 ID=Msa0478740-mRNA-1:cds;Parent=Msa0478740-mRNA-1
chr3_3 CDS 83606140 83606199 83606140 ID=Msa0478740-mRNA-1:cds;Parent=Msa0478740-mRNA-1
chr3_3 CDS 83605810 83605894 83605810 ID=Msa0478740-mRNA-1:cds;Parent=Msa0478740-mRNA-1
chr3_3 three_prime_UTR 83605751 83605809 83605751 ID=Msa0478740-mRNA-1:three_prime_utr;Parent=Msa0478740-mRNA-1
chr3_3 three_prime_UTR 83604023 83604645 83604023 ID=Msa0478740-mRNA-1:three_prime_utr;Parent=Msa0478740-mRNA-1
chr3_3 three_prime_UTR 83602989 83603465 83602989 ID=Msa0478740-mRNA-1:three_prime_utr;Parent=Msa0478740-mRNA-1
Gene Sequence

>Msa0478740

ATGGCTACAGTTTCTGCTCTCAACTCTTTCTCTTCCACCGCCACCACGCAATTTTCCCTCCCTCCAAAACGTAACCTTCCCCTTTCCTCTTCTCACATTTTCTCTCGCAGAGACATAGCGTTACTCTCATTCTTTTCACTCTCTGCACCTGCCTCCGCCATTGACATTGGCATCTCAGGACCAAAGGATTGGCTAAAAGAACAAAAGAAGAAATCTTCCAAGTTTCTACTTGCTCCTGTCGATGCCTCTCGTGAAAGCCTTCGCTCTGTTTATCTTTATCTCACGGAAACTGGTGCTACTTATACAGATGAAGATTTGCAGAAATTTCAGCAGCTATTCAGATCTGCTGCCAGGGATTGTGTCCCAGAGGATAGGAATTCTTTCGTAGCTTTCCAAGCTAACACCGGAGTTGAGGTGTGCACATTTCGGTTGATTGTGAAGAATGCAGCCTCCTTACTTGGAAAGAAGGATCCTGTGAAGTTAGAAGCCGAAGCTTTGCTAGATAATCTTATAAGATCATTCGCCTCTATCAGTGGGCTGGCAAATGAAACCAACATTGAACTTGCATCGGATAGGAGCAAAATAGCAGATGCTGTATCGGATACAATATTATCTCTCGACAAATTTGAGCAGGGAATTAGGGATTGCCTTGAAATCTGA

Protein sequence

>Msa0478740

MATVSALNSFSSTATTQFSLPPKRNLPLSSSHIFSRRDIALLSFFSLSAPASAIDIGISGPKDWLKEQKKKSSKFLLAPVDASRESLRSVYLYLTETGATYTDEDLQKFQQLFRSAARDCVPEDRNSFVAFQANTGVEVCTFRLIVKNAASLLGKKDPVKLEAEALLDNLIRSFASISGLANETNIELASDRSKIADAVSDTILSLDKFEQGIRDCLEI*