AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1267340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1267340 MtrunA17_Chr4g0076731 93.946 446 9 6 1 440 1 434 0.0 855
Msa1267340 MtrunA17_Chr5g0417001 48.276 203 90 4 48 239 5 203 1.01e-60 202
Msa1267340 MtrunA17_Chr6g0453131 52.695 167 68 2 50 205 8 174 2.63e-60 201
Msa1267340 MtrunA17_Chr5g0442771 43.796 274 119 9 45 288 6 274 1.49e-59 197
Msa1267340 MtrunA17_Chr8g0361731 53.049 164 65 3 54 205 11 174 2.27e-59 199
Msa1267340 MtrunA17_Chr4g0038751 53.947 152 65 2 56 205 14 162 2.07e-56 188
Msa1267340 MtrunA17_Chr8g0359921 58.000 150 58 2 59 204 16 164 2.42e-55 186
Msa1267340 MtrunA17_Chr2g0318081 56.051 157 62 3 59 211 18 171 2.43e-55 187
Msa1267340 MtrunA17_Chr3g0124761 55.000 160 64 3 59 212 9 166 4.80e-54 182
Msa1267340 MtrunA17_Chr2g0318101 50.299 167 69 2 59 211 17 183 1.19e-53 182
Msa1267340 MtrunA17_Chr4g0047841 47.283 184 71 3 54 211 12 195 1.35e-52 179
Msa1267340 MtrunA17_Chr3g0130731 53.595 153 64 2 59 206 9 159 1.48e-52 178
Msa1267340 MtrunA17_Chr8g0384721 53.247 154 64 2 59 206 9 160 4.23e-52 176
Msa1267340 MtrunA17_Chr6g0481091 52.288 153 68 3 59 207 8 159 1.74e-51 173
Msa1267340 MtrunA17_Chr7g0252971 43.564 202 87 4 59 244 10 200 3.29e-51 176
Msa1267340 MtrunA17_Chr2g0311651 50.562 178 66 5 44 204 14 186 5.26e-51 174
Msa1267340 MtrunA17_Chr2g0311661 50.562 178 65 5 44 204 14 185 5.79e-51 174
Msa1267340 MtrunA17_Chr3g0109821 52.597 154 67 3 59 207 8 160 1.69e-50 181
Msa1267340 MtrunA17_Chr2g0326361 45.745 188 87 5 59 232 16 202 2.10e-50 173
Msa1267340 MtrunA17_Chr2g0309891 51.316 152 68 3 59 205 8 158 4.97e-50 173
Msa1267340 MtrunA17_Chr5g0400461 51.299 154 66 3 59 204 8 160 2.39e-49 171
Msa1267340 MtrunA17_Chr5g0417791 48.810 168 70 5 59 212 5 170 5.44e-49 167
Msa1267340 MtrunA17_Chr5g0433781 52.288 153 68 3 59 207 8 159 1.36e-48 176
Msa1267340 MtrunA17_Chr4g0042561 50.658 152 68 3 59 204 11 161 1.60e-48 167
Msa1267340 MtrunA17_Chr7g0263931 48.795 166 78 2 48 206 2 167 2.78e-48 168
Msa1267340 MtrunA17_Chr3g0139331 49.032 155 78 1 53 206 7 161 7.21e-48 167
Msa1267340 MtrunA17_Chr6g0484441 48.077 156 74 2 59 211 7 158 2.59e-47 165
Msa1267340 MtrunA17_Chr4g0054791 52.632 152 66 3 59 204 8 159 3.66e-47 164
Msa1267340 MtrunA17_Chr4g0056541 48.344 151 74 2 57 204 7 156 6.54e-47 165
Msa1267340 MtrunA17_Chr5g0398971 47.712 153 74 3 57 204 7 158 1.65e-46 164
Msa1267340 MtrunA17_Chr2g0316971 51.316 152 69 2 59 205 25 176 3.37e-46 164
Msa1267340 MtrunA17_Chr4g0018391 47.682 151 75 2 57 204 7 156 3.85e-46 162
Msa1267340 MtrunA17_Chr4g0060931 46.927 179 81 5 43 212 4 177 3.96e-46 163
Msa1267340 MtrunA17_Chr2g0309331 48.026 152 76 1 56 204 9 160 6.32e-46 162
Msa1267340 MtrunA17_Chr8g0364791 46.154 156 75 4 57 206 6 158 6.50e-46 164
Msa1267340 MtrunA17_Chr3g0091921 48.701 154 74 2 56 205 15 167 2.42e-45 159
Msa1267340 MtrunA17_Chr8g0384201 44.872 156 77 4 57 206 6 158 3.23e-45 164
Msa1267340 MtrunA17_Chr5g0428991 52.349 149 66 3 60 204 28 175 5.17e-45 165
Msa1267340 MtrunA17_Chr6g0453451 50.649 154 69 3 59 207 22 173 6.03e-45 159
Msa1267340 MtrunA17_Chr1g0147421 46.012 163 85 3 53 212 23 185 1.23e-44 159
Msa1267340 MtrunA17_Chr1g0201021 50.327 153 71 3 58 206 20 171 1.38e-44 163
Msa1267340 MtrunA17_Chr4g0017921 46.753 154 77 3 57 207 8 159 2.35e-44 158
Msa1267340 MtrunA17_Chr5g0405211 45.223 157 82 2 51 204 2 157 8.15e-44 157
Msa1267340 MtrunA17_Chr3g0130101 45.570 158 81 3 53 206 3 159 8.67e-44 157
Msa1267340 MtrunA17_Chr3g0128151 49.664 149 70 3 60 204 25 172 1.57e-43 160
Msa1267340 MtrunA17_Chr1g0200561 44.654 159 84 2 56 211 18 175 4.14e-43 155
Msa1267340 MtrunA17_Chr3g0144271 45.087 173 89 4 39 205 4 176 9.70e-43 155
Msa1267340 MtrunA17_Chr3g0128111 40.000 195 101 5 15 204 9 192 1.28e-42 150
Msa1267340 MtrunA17_Chr8g0372121 46.711 152 77 2 56 204 5 155 2.27e-42 152
Msa1267340 MtrunA17_Chr7g0253011 47.059 153 74 3 59 204 19 171 1.09e-41 152
Msa1267340 MtrunA17_Chr1g0197351 48.447 161 72 3 57 207 42 201 2.41e-41 153
Msa1267340 MtrunA17_Chr6g0461661 48.252 143 64 2 60 201 21 154 4.32e-41 150
Msa1267340 MtrunA17_Chr3g0092671 44.737 152 79 4 59 206 7 157 1.43e-40 152
Msa1267340 MtrunA17_Chr1g0183741 41.176 204 99 6 59 244 12 212 1.82e-40 145
Msa1267340 MtrunA17_Chr8g0346001 42.593 162 78 3 57 204 15 175 1.88e-40 149
Msa1267340 MtrunA17_Chr2g0312321 37.903 248 128 8 59 290 13 250 2.31e-40 146
Msa1267340 MtrunA17_Chr7g0217721 42.593 162 75 2 60 204 22 182 2.52e-39 144
Msa1267340 MtrunA17_Chr7g0214071 45.614 171 85 4 59 226 17 182 6.88e-39 140
Msa1267340 MtrunA17_Chr7g0261411 47.945 146 71 3 59 202 12 154 8.92e-39 141
Msa1267340 MtrunA17_Chr1g0197361 42.105 152 83 4 59 206 10 160 1.57e-38 147
Msa1267340 MtrunA17_Chr7g0217711 50.806 124 60 1 60 183 22 144 1.75e-38 137
Msa1267340 MtrunA17_Chr4g0026141 39.196 199 104 5 54 235 2 200 2.75e-38 139
Msa1267340 MtrunA17_Chr7g0266701 40.854 164 84 4 55 205 2 165 7.20e-38 138
Msa1267340 MtrunA17_Chr2g0321631 43.478 161 76 4 59 206 6 164 1.99e-37 137
Msa1267340 MtrunA17_Chr8g0385991 46.250 160 74 5 59 208 16 173 2.83e-37 135
Msa1267340 MtrunA17_Chr8g0345671 45.223 157 71 8 52 201 7 155 6.10e-34 131
Msa1267340 MtrunA17_Chr3g0131911 41.463 164 81 4 59 209 16 177 1.48e-32 123
Msa1267340 MtrunA17_Chr8g0345691 42.384 151 79 5 55 201 10 156 2.49e-31 124
Msa1267340 MtrunA17_Chr8g0345711 42.424 132 71 4 54 181 9 139 5.44e-29 112
Msa1267340 MtrunA17_Chr2g0321741 48.113 106 53 2 77 181 12 116 1.55e-28 115
Msa1267340 MtrunA17_Chr3g0113001 38.342 193 78 7 102 268 10 187 3.87e-26 107
Msa1267340 MtrunA17_Chr4g0050701 38.065 155 79 3 59 204 13 159 6.08e-26 103
Msa1267340 MtrunA17_Chr8g0345731 40.602 133 73 4 55 181 22 154 9.89e-24 97.4
Msa1267340 MtrunA17_Chr7g0243371 57.333 75 31 1 110 183 17 91 9.09e-23 93.2
Msa1267340 MtrunA17_Chr8g0345721 36.774 155 64 5 60 181 38 191 2.04e-22 94.7
Msa1267340 MtrunA17_Chr8g0345741 35.948 153 82 6 68 212 2 146 9.00e-21 88.6
Msa1267340 MtrunA17_Chr8g0345701 39.474 152 69 8 58 189 7 155 2.25e-20 88.2
Msa1267340 MtrunA17_Chr8g0384351 36.986 146 73 5 59 204 12 138 4.61e-19 84.7
Msa1267340 MtrunA17_Chr3g0113031 35.795 176 71 7 120 268 3 163 1.30e-17 82.4
Msa1267340 MtrunA17_Chr7g0251661 31.538 130 83 4 55 181 7 133 2.00e-13 67.8
Msa1267340 MtrunA17_Chr7g0251651 31.081 148 93 5 60 203 21 163 3.18e-13 68.2
Msa1267340 MtrunA17_Chr3g0130321 29.114 158 93 4 59 203 9 160 1.04e-12 67.0
Msa1267340 MtrunA17_Chr1g0194791 54.167 48 21 1 59 105 48 95 1.06e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1267340 AT2G02450.1 74.771 218 47 3 1 217 1 211 2.89e-110 330
Msa1267340 AT2G02450.2 74.771 218 47 3 1 217 1 211 3.30e-110 331
Msa1267340 AT5G39820.1 49.010 202 75 5 42 215 2 203 1.63e-61 203
Msa1267340 AT2G17040.1 57.516 153 60 2 55 205 4 153 2.91e-60 198
Msa1267340 AT1G26870.1 47.059 204 96 3 46 237 5 208 1.08e-59 201
Msa1267340 AT2G43000.1 46.875 192 96 3 49 235 10 200 6.48e-58 192
Msa1267340 AT4G27410.2 58.108 148 59 2 59 204 16 162 1.49e-56 189
Msa1267340 AT3G15500.1 58.784 148 58 2 59 204 16 162 4.81e-56 188
Msa1267340 AT1G52890.1 58.784 148 58 2 59 204 16 162 5.50e-55 186
Msa1267340 AT1G61110.1 51.124 178 72 3 54 217 13 189 2.70e-54 184
Msa1267340 AT1G01720.1 55.696 158 62 3 59 210 9 164 9.98e-54 181
Msa1267340 AT1G77450.1 55.844 154 61 2 59 207 12 163 4.62e-53 178
Msa1267340 AT3G04070.2 40.996 261 122 9 59 305 12 254 5.08e-53 181
Msa1267340 AT5G08790.1 52.258 155 65 2 60 207 10 162 5.55e-53 179
Msa1267340 AT4G27410.3 52.121 165 59 3 59 204 16 179 4.00e-52 178
Msa1267340 AT5G63790.1 53.247 154 63 2 60 206 53 204 4.39e-52 177
Msa1267340 AT5G63790.2 53.247 154 63 2 60 206 63 214 5.98e-52 177
Msa1267340 AT3G15510.1 50.000 164 68 2 61 210 21 184 1.47e-51 178
Msa1267340 AT5G17260.1 52.532 158 69 3 59 211 8 164 2.37e-51 180
Msa1267340 AT3G03200.1 52.532 158 69 3 59 211 8 164 5.30e-51 179
Msa1267340 AT3G04070.1 38.628 277 122 9 59 305 12 270 1.01e-50 176
Msa1267340 AT5G46590.1 54.730 148 62 2 59 201 8 155 8.20e-50 171
Msa1267340 AT1G69490.1 50.641 156 66 3 59 206 11 163 1.14e-49 170
Msa1267340 AT3G17730.1 49.673 153 72 3 59 207 8 159 1.73e-49 169
Msa1267340 AT4G17980.1 51.634 153 67 3 59 204 8 160 2.10e-49 169
Msa1267340 AT4G17980.2 51.634 153 67 3 59 204 8 160 2.61e-49 170
Msa1267340 AT3G15170.1 51.948 154 69 2 59 207 22 175 2.92e-48 167
Msa1267340 AT1G65910.1 50.980 153 70 3 59 207 8 159 3.40e-48 174
Msa1267340 AT5G07680.1 50.000 178 76 5 42 211 3 175 1.51e-47 166
Msa1267340 AT5G46590.2 56.818 132 55 1 59 188 8 139 1.55e-47 165
Msa1267340 AT1G76420.1 51.333 150 71 2 59 206 24 173 6.32e-47 165
Msa1267340 AT5G61430.1 50.980 153 68 3 59 206 18 168 6.37e-47 165
Msa1267340 AT1G32510.1 48.555 173 74 4 59 220 8 176 6.41e-47 163
Msa1267340 AT3G10490.1 49.673 153 71 3 57 204 27 178 7.35e-47 162
Msa1267340 AT1G52880.1 52.866 157 61 3 61 204 21 177 9.36e-47 164
Msa1267340 AT1G34180.3 50.980 153 70 3 59 207 18 169 9.85e-47 167
Msa1267340 AT3G10480.1 48.718 156 74 3 57 207 27 181 1.38e-46 167
Msa1267340 AT5G07680.2 52.174 161 65 4 59 211 5 161 1.41e-46 163
Msa1267340 AT1G12260.1 49.669 151 72 2 57 204 7 156 1.47e-46 166
Msa1267340 AT1G12260.2 49.669 151 72 2 57 204 7 156 1.81e-46 164
Msa1267340 AT3G10480.2 49.045 157 71 4 57 207 27 180 2.47e-46 166
Msa1267340 AT3G04060.1 47.879 165 82 1 44 204 7 171 3.45e-46 163
Msa1267340 AT3G10490.2 48.718 156 74 3 57 207 27 181 6.14e-46 165
Msa1267340 AT1G34180.1 51.316 152 69 3 59 206 18 168 6.84e-46 167
Msa1267340 AT2G24430.2 47.205 161 83 2 46 204 5 165 9.00e-46 161
Msa1267340 AT2G24430.1 47.205 161 83 2 46 204 5 165 9.00e-46 161
Msa1267340 AT3G29035.1 44.898 196 92 6 44 228 11 201 9.27e-46 161
Msa1267340 AT5G39610.1 49.686 159 75 3 50 204 13 170 1.49e-45 160
Msa1267340 AT3G18400.1 50.331 151 67 3 59 205 7 153 2.70e-45 160
Msa1267340 AT1G33280.1 47.403 154 76 3 57 207 8 159 3.07e-45 159
Msa1267340 AT1G62700.1 49.007 151 73 2 57 204 7 156 8.17e-45 160
Msa1267340 AT1G62700.2 49.007 151 73 2 57 204 7 156 8.17e-45 160
Msa1267340 AT1G34190.1 50.000 152 71 3 59 206 18 168 9.39e-45 164
Msa1267340 AT1G79580.3 49.007 151 73 2 57 204 17 166 1.88e-44 159
Msa1267340 AT1G79580.5 49.007 151 73 2 57 204 17 166 1.88e-44 159
Msa1267340 AT1G79580.4 49.007 151 73 2 57 204 17 166 1.88e-44 159
Msa1267340 AT1G79580.2 49.007 151 73 2 57 204 17 166 1.88e-44 159
Msa1267340 AT1G79580.1 49.007 151 73 2 57 204 17 166 1.88e-44 159
Msa1267340 AT1G54330.1 52.027 148 67 3 59 204 8 153 2.29e-44 157
Msa1267340 AT4G35580.1 51.678 149 67 3 60 204 12 159 2.80e-44 162
Msa1267340 AT4G35580.2 51.678 149 67 3 60 204 12 159 3.61e-44 162
Msa1267340 AT4G35580.3 51.678 149 67 3 60 204 12 159 3.86e-44 162
Msa1267340 AT5G24590.2 44.025 159 85 2 60 214 16 174 4.45e-44 160
Msa1267340 AT1G34180.4 46.667 165 71 3 59 207 18 181 5.48e-44 160
Msa1267340 AT5G53950.1 49.689 161 74 3 51 204 9 169 6.76e-44 158
Msa1267340 AT5G18270.2 48.667 150 73 1 59 204 23 172 1.45e-43 156
Msa1267340 AT4G36160.1 32.168 286 171 5 57 335 10 279 1.72e-43 157
Msa1267340 AT4G36160.3 32.168 286 171 5 57 335 10 279 1.72e-43 157
Msa1267340 AT4G36160.2 32.168 286 171 5 57 335 14 283 1.80e-43 157
Msa1267340 AT4G10350.1 45.513 156 79 3 57 207 9 163 2.26e-43 155
Msa1267340 AT1G71930.2 45.638 149 77 2 59 204 11 158 2.73e-43 155
Msa1267340 AT1G71930.1 45.638 149 77 2 59 204 11 158 2.73e-43 155
Msa1267340 AT5G18270.1 48.667 150 73 1 59 204 23 172 2.95e-43 155
Msa1267340 AT1G34180.2 46.951 164 70 3 59 206 18 180 3.08e-43 160
Msa1267340 AT1G33060.2 48.993 149 71 3 60 204 27 174 3.53e-43 161
Msa1267340 AT5G04410.1 46.452 155 76 4 57 206 9 161 3.90e-43 160
Msa1267340 AT1G33060.1 48.993 149 71 3 60 204 27 174 4.27e-43 160
Msa1267340 AT2G18060.3 46.358 151 77 2 57 204 9 158 5.74e-43 155
Msa1267340 AT2G18060.1 46.358 151 77 2 57 204 9 158 5.74e-43 155
Msa1267340 AT3G10500.1 44.805 154 80 3 57 206 9 161 6.03e-43 159
Msa1267340 AT3G49530.2 44.295 149 79 2 60 204 16 164 1.23e-41 152
Msa1267340 AT2G46770.1 43.195 169 77 5 57 207 16 183 1.75e-41 151
Msa1267340 AT5G62380.2 43.210 162 88 2 59 217 9 169 1.78e-41 150
Msa1267340 AT5G62380.1 43.210 162 88 2 59 217 9 169 1.78e-41 150
Msa1267340 AT3G49530.1 43.478 161 83 3 60 212 16 176 2.72e-41 153
Msa1267340 AT3G61910.1 50.000 132 62 2 57 185 11 141 2.88e-41 150
Msa1267340 AT5G66300.1 44.737 152 79 3 57 204 12 162 1.05e-40 147
Msa1267340 AT3G12977.1 46.309 149 76 2 59 204 20 167 1.21e-40 146
Msa1267340 AT3G10480.3 41.270 189 72 4 57 207 27 214 1.45e-40 152
Msa1267340 AT1G32770.1 40.571 175 85 4 57 213 16 189 2.70e-40 147
Msa1267340 AT3G12910.1 44.571 175 78 4 49 205 13 186 2.76e-40 146
Msa1267340 AT1G56010.2 44.079 152 78 3 59 204 21 171 5.87e-40 146
Msa1267340 AT2G33480.2 50.000 144 68 2 59 202 17 156 5.03e-39 142
Msa1267340 AT5G13180.1 51.316 152 67 4 59 206 16 164 9.10e-39 140
Msa1267340 AT2G33480.1 50.685 146 66 3 59 202 17 158 1.40e-38 140
Msa1267340 AT4G28530.1 44.242 165 71 4 59 205 12 173 3.96e-38 142
Msa1267340 AT5G64060.1 34.855 241 135 6 57 293 6 228 6.61e-38 141
Msa1267340 AT5G09330.5 42.208 154 84 3 57 206 6 158 1.50e-37 143
Msa1267340 AT5G09330.2 42.208 154 84 3 57 206 6 158 1.50e-37 143
Msa1267340 AT5G09330.4 42.208 154 84 3 57 206 6 158 1.50e-37 143
Msa1267340 AT5G09330.3 42.208 154 84 3 57 206 6 158 1.50e-37 143
Msa1267340 AT5G09330.1 42.208 154 84 3 57 206 6 158 1.50e-37 143
Msa1267340 AT5G22380.1 45.679 162 78 4 55 206 3 164 1.82e-36 134
Msa1267340 AT2G27300.1 41.830 153 76 4 57 205 14 157 2.28e-36 136
Msa1267340 AT3G44350.2 40.099 202 96 7 60 238 8 207 6.84e-36 132
Msa1267340 AT5G22290.1 44.366 142 77 2 41 181 5 145 1.26e-35 135
Msa1267340 AT1G32870.1 46.875 160 76 4 53 206 6 162 2.44e-35 137
Msa1267340 AT1G32870.2 46.875 160 76 4 53 206 6 162 2.65e-35 137
Msa1267340 AT1G32870.3 46.875 160 76 4 53 206 42 198 6.20e-35 137
Msa1267340 AT3G44290.2 44.800 125 67 2 58 181 15 138 4.38e-34 127
Msa1267340 AT3G44290.1 44.800 125 67 2 58 181 15 138 2.97e-33 128
Msa1267340 AT3G44350.1 47.692 130 59 3 60 182 8 135 3.00e-32 120
Msa1267340 AT5G04395.1 39.583 144 72 2 59 187 30 173 1.15e-31 119
Msa1267340 AT4G01550.1 41.104 163 82 6 58 212 5 161 5.85e-30 121
Msa1267340 AT5G61430.2 50.467 107 46 3 105 206 1 105 1.06e-28 114
Msa1267340 AT3G12977.2 50.000 102 47 2 106 204 14 114 4.87e-27 108
Msa1267340 AT1G56010.1 47.619 105 49 2 105 204 1 104 4.87e-27 109
Msa1267340 AT4G01520.1 40.881 159 78 7 60 208 7 159 8.63e-26 107
Msa1267340 AT4G01540.3 41.509 159 77 7 60 208 7 159 2.36e-25 107
Msa1267340 AT4G01540.4 41.509 159 77 7 60 208 7 159 3.54e-25 107
Msa1267340 AT5G64530.2 44.531 128 56 5 59 184 5 119 4.77e-25 100
Msa1267340 AT4G01540.1 41.509 159 77 7 60 208 7 159 5.34e-25 107
Msa1267340 AT5G64530.1 44.531 128 56 5 59 184 5 119 5.50e-25 101
Msa1267340 AT4G01540.2 41.509 159 77 7 60 208 7 159 5.50e-25 106
Msa1267340 AT4G10350.2 43.119 109 59 2 101 207 9 116 4.69e-24 102
Msa1267340 AT4G28530.2 42.636 129 51 4 59 167 12 137 1.49e-23 100
Msa1267340 AT2G43000.2 41.803 122 65 3 119 235 2 122 2.99e-23 97.1
Msa1267340 AT2G33480.3 50.526 95 44 2 110 202 8 101 1.39e-22 95.9
Msa1267340 AT1G02250.1 41.406 128 66 5 60 181 6 130 9.65e-22 96.7
Msa1267340 AT1G02230.1 36.667 150 80 7 60 201 6 148 1.85e-21 95.9
Msa1267340 AT3G04420.2 40.476 126 70 3 60 181 6 130 3.30e-21 94.0
Msa1267340 AT3G04420.1 40.476 126 70 3 60 181 6 130 3.61e-21 94.7
Msa1267340 AT3G10490.4 50.617 81 36 2 130 207 2 81 2.13e-19 89.7
Msa1267340 AT3G10490.3 50.617 81 36 2 130 207 2 81 2.13e-19 89.7
Msa1267340 AT1G02220.1 36.076 158 82 6 60 209 6 152 3.39e-18 86.7
Msa1267340 AT1G01010.1 36.620 142 74 7 60 187 6 145 4.01e-18 86.7
Msa1267340 AT5G50820.1 35.000 160 74 7 59 203 19 163 1.28e-14 72.8
Msa1267340 AT3G56530.1 30.405 148 97 4 59 202 54 199 1.97e-14 74.3
Msa1267340 AT3G04430.1 39.252 107 62 3 63 167 6 111 3.09e-14 71.6
Msa1267340 AT2G18060.2 44.286 70 38 1 135 204 2 70 1.83e-13 70.9
Msa1267340 AT5G14000.1 31.544 149 96 4 60 206 18 162 6.97e-13 67.8
Msa1267340 AT5G14000.2 32.540 126 80 3 60 183 18 140 9.58e-12 63.5

Find 128 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTAACAACTTCTGGTTAT+TGG 0.211019 8_2:+72524300 Msa1267340:CDS
GATGATGATGGTCGTGTAAT+TGG 0.239615 8_2:-72525341 None:intergenic
TTCTAATTGCTCTGATTATT+CGG 0.257989 8_2:+72526145 Msa1267340:three_prime_UTR
TAAGCAGCAAAATGAAATAT+TGG 0.264868 8_2:+72525400 Msa1267340:CDS
ACTGAAAACTTTCGTTCAAT+TGG 0.296485 8_2:+72524353 Msa1267340:CDS
CCTAATCGTGTAACAACTTC+TGG 0.308486 8_2:+72524293 Msa1267340:CDS
CCAGAAGTTGTTACACGATT+AGG 0.317297 8_2:-72524293 None:intergenic
ATATCGTTCGGTTTCATGTT+GGG 0.335622 8_2:-72524459 None:intergenic
AAGGAGGTTGGAAATTGATT+TGG 0.344511 8_2:-72525908 None:intergenic
TGAAGCTGAGACTGGGAAAA+TGG 0.347823 8_2:-72525711 None:intergenic
GCTGCCGCTGAAGCTGAGAC+TGG 0.355613 8_2:-72525719 None:intergenic
TGCATTATATAGTAGGTAGT+AGG 0.357995 8_2:-72526062 None:intergenic
TATGACCCTTGGGAACTTCC+TGG 0.368869 8_2:+72523867 Msa1267340:CDS
GTAGACAAATGATTGGGATT+TGG 0.373594 8_2:-72525863 None:intergenic
CAACTGGTTCGGATGCCTTT+GGG 0.374805 8_2:-72524413 None:intergenic
CCAACTGGTTCGGATGCCTT+TGG 0.377419 8_2:-72524414 None:intergenic
AAGCAGCAAAATGAAATATT+GGG 0.379687 8_2:+72525401 Msa1267340:CDS
TATATATGTTATTGAAATCA+TGG 0.380572 8_2:-72526176 None:intergenic
ATCTTTATCGCTATGACCCT+TGG 0.382909 8_2:+72523856 Msa1267340:CDS
ATGTATTTGCATTATATAGT+AGG 0.386019 8_2:-72526069 None:intergenic
TGATCACATAGTTAACAAAA+TGG 0.392091 8_2:+72525463 Msa1267340:CDS
GTATAAAAGAGGAGAGAAAA+GGG 0.392745 8_2:+72523527 None:intergenic
TGTTAGTTAGTTAGAGAGAG+TGG 0.399180 8_2:+72523556 Msa1267340:five_prime_UTR
AAGCTCATGCTGCTCATGTT+AGG 0.402422 8_2:-72523618 None:intergenic
TCTTCTGAACGGTAATTAGT+AGG 0.410368 8_2:-72525563 None:intergenic
GATCATGTCACAACCACTCT+TGG 0.411521 8_2:+72525512 Msa1267340:CDS
ATGTGATCATCAATTGTCTT+TGG 0.414276 8_2:-72525449 None:intergenic
ATGATGATGGTCGTGTAATT+GGG 0.415001 8_2:-72525340 None:intergenic
GAGGTGTTGTTACTACTGTT+GGG 0.428986 8_2:-72525980 None:intergenic
TGCAGCACTGGTAGCAGTAT+TGG 0.434071 8_2:-72525756 None:intergenic
TTGGGGTGATTATGATCCTC+AGG 0.436862 8_2:-72525962 None:intergenic
CAGCAATGTAGACAAATGAT+TGG 0.439526 8_2:-72525870 None:intergenic
TCTGGTTATTGGAAAGCAAC+AGG 0.440994 8_2:+72524311 Msa1267340:CDS
GATATCGTTCGGTTTCATGT+TGG 0.441960 8_2:-72524460 None:intergenic
AGTTGATAACTGAAATCAAC+TGG 0.445321 8_2:-72526107 None:intergenic
TTGGGAATGGGATTTGTTGT+TGG 0.446359 8_2:+72525419 Msa1267340:CDS
TGATGATGGATGATCTCAAT+AGG 0.454191 8_2:+72525780 Msa1267340:CDS
GCAAAATGAAATATTGGGAA+TGG 0.458597 8_2:+72525406 Msa1267340:CDS
GGAGGTGTTGTTACTACTGT+TGG 0.465590 8_2:-72525981 None:intergenic
CTACCTTCGCCGTAAGGTCG+AGG 0.466198 8_2:+72523797 Msa1267340:CDS
GCATTATATAGTAGGTAGTA+GGG 0.467242 8_2:-72526061 None:intergenic
CAAAATGAAATATTGGGAAT+GGG 0.469377 8_2:+72525407 Msa1267340:CDS
GAGCATGACGTGGTTATGCC+AGG 0.470442 8_2:+72523735 Msa1267340:CDS
TCTCTGACCGACTGTGGGAC+TGG 0.472209 8_2:+72525930 Msa1267340:CDS
TGATTATGATCCTCAGGGAT+TGG 0.472665 8_2:-72525956 None:intergenic
ATACTCATTCATAATCCAAC+TGG 0.474720 8_2:-72524429 None:intergenic
TTATTGAAATCATGGGATAC+AGG 0.479933 8_2:-72526168 None:intergenic
CATTCATAATCCAACTGGTT+CGG 0.480582 8_2:-72524424 None:intergenic
TCTTTATCGCTATGACCCTT+GGG 0.483331 8_2:+72523857 Msa1267340:CDS
TTCAGTTATCAACTTTATGT+AGG 0.484690 8_2:+72526116 Msa1267340:three_prime_UTR
AGGAGGAGTATTGCTGTACT+TGG 0.484755 8_2:-72525540 None:intergenic
CAAGCTCTTCTTCAGTTGGA+TGG 0.486659 8_2:-72523767 None:intergenic
AGTAATTAGTGATTACTTGA+AGG 0.490931 8_2:-72526002 None:intergenic
ATCATGTCACAACCACTCTT+GGG 0.491534 8_2:+72525513 Msa1267340:CDS
GGCGCTGCCGCCACCACAAG+CGG 0.493139 8_2:-72525690 None:intergenic
AGAGTTCTACCTTCGCCGTA+AGG 0.493247 8_2:+72523791 Msa1267340:CDS
GATTTGGATGATTGAGATGT+GGG 0.497103 8_2:-72525847 None:intergenic
TTCCCTCGACCTTACGGCGA+AGG 0.497938 8_2:-72523800 None:intergenic
CTGCCGCTGAAGCTGAGACT+GGG 0.499254 8_2:-72525718 None:intergenic
GGAAATTGATTTGGTAACAT+TGG 0.503521 8_2:-72525899 None:intergenic
TATCGTTCGGTTTCATGTTG+GGG 0.505358 8_2:-72524458 None:intergenic
TTAGTCTCCGCTTGTGGTGG+CGG 0.506486 8_2:+72525683 Msa1267340:CDS
TCTACAAGCTCTTCTTCAGT+TGG 0.506937 8_2:-72523771 None:intergenic
AGTTAGTTAGAGAGAGTGGA+TGG 0.509005 8_2:+72523560 Msa1267340:exon
TGAAACCGAACGATATCAAA+AGG 0.509230 8_2:+72524466 Msa1267340:CDS
ATCCATCATCATTGCAGCAC+TGG 0.512112 8_2:-72525768 None:intergenic
TTTGGCAGCAATCGGAGAGA+AGG 0.516877 8_2:+72524220 Msa1267340:CDS
GGAAAGCAACAGGAGCAGAT+AGG 0.517048 8_2:+72524321 Msa1267340:CDS
AGCAATGTAGACAAATGATT+GGG 0.519527 8_2:-72525869 None:intergenic
TGAGCAGCTTTGGCAGCAAT+CGG 0.520334 8_2:+72524212 Msa1267340:intron
GGGTGAGATATCCCTATGTC+GGG 0.523444 8_2:+72525268 Msa1267340:intron
TACCGTTCAGAAGATGAAGA+AGG 0.528026 8_2:+72525572 Msa1267340:CDS
CCTCCTTCTCTGACCGACTG+TGG 0.530397 8_2:+72525924 Msa1267340:CDS
AGCTACAGCTACAGTAGTAG+TGG 0.543646 8_2:+72523692 Msa1267340:CDS
CCACAGTCGGTCAGAGAAGG+AGG 0.546229 8_2:-72525924 None:intergenic
TGGGAGACAACGAGGGAGGG+AGG 0.546963 8_2:-72525321 None:intergenic
GCATATTGTACTAGTTGCCT+AGG 0.547334 8_2:-72525641 None:intergenic
TGGATGGCAATAGCAGCAGC+AGG 0.551609 8_2:+72523576 Msa1267340:exon
GTCCCACAGTCGGTCAGAGA+AGG 0.552251 8_2:-72525927 None:intergenic
TACCTTCGCCGTAAGGTCGA+GGG 0.555355 8_2:+72523798 Msa1267340:CDS
ATATATGTTATTGAAATCAT+GGG 0.557506 8_2:-72526175 None:intergenic
GGGAGACAACGAGGGAGGGA+GGG 0.560158 8_2:-72525320 None:intergenic
AGTCGGTCAGAGAAGGAGGT+TGG 0.561135 8_2:-72525920 None:intergenic
TACCAGTGCTGCAATGATGA+TGG 0.562350 8_2:+72525766 Msa1267340:CDS
CTCCTTCTCTGACCGACTGT+GGG 0.564074 8_2:+72525925 Msa1267340:CDS
CTAGTACAATATGCAGCTGC+GGG 0.565924 8_2:+72525650 Msa1267340:CDS
ATCCTTCTTCATCTTCTGAA+CGG 0.566170 8_2:-72525574 None:intergenic
TGGGGTGATTATGATCCTCA+GGG 0.566445 8_2:-72525961 None:intergenic
CACATAGTTAACAAAATGGA+AGG 0.567229 8_2:+72525467 Msa1267340:CDS
GAACGGTAATTAGTAGGAGG+AGG 0.572179 8_2:-72525557 None:intergenic
AGGGTGAGATATCCCTATGT+CGG 0.573960 8_2:+72525267 Msa1267340:intron
TATATACCAGGAAGTTCCCA+AGG 0.575847 8_2:-72523873 None:intergenic
GGATTTGGATGATTGAGATG+TGG 0.580035 8_2:-72525848 None:intergenic
AATTAGTGATTACTTGAAGG+AGG 0.582479 8_2:-72525999 None:intergenic
ATGAGCTTGAGTCACGAAGA+TGG 0.587554 8_2:+72523633 Msa1267340:CDS
CTGTTAGTCTCCGCTTGTGG+TGG 0.588546 8_2:+72525680 Msa1267340:CDS
TCTCTTGTATACCCGACATA+GGG 0.588580 8_2:-72525279 None:intergenic
CTCTCTTGTATACCCGACAT+AGG 0.590093 8_2:-72525280 None:intergenic
CCAAAGGCATCCGAACCAGT+TGG 0.592737 8_2:+72524414 Msa1267340:CDS
CGAGATAGAAAGTATCGAAA+CGG 0.593685 8_2:+72524263 Msa1267340:CDS
AGCATGACGTGGTTATGCCA+GGG 0.596795 8_2:+72523736 Msa1267340:CDS
TATAAAAGAGGAGAGAAAAG+GGG 0.597062 8_2:+72523528 None:intergenic
TGTCGGGTATACAAGAGAGC+AGG 0.602519 8_2:+72525284 Msa1267340:CDS
AATTGGGAGACAACGAGGGA+GGG 0.605068 8_2:-72525324 None:intergenic
TTTCGATACTTTCTATCTCG+AGG 0.612931 8_2:-72524260 None:intergenic
CGACCATCATCATCATCAAG+AGG 0.614625 8_2:+72525350 Msa1267340:CDS
TCTCTGTTAGTCTCCGCTTG+TGG 0.618457 8_2:+72525677 Msa1267340:CDS
TTTCCCAGTCTCAGCTTCAG+CGG 0.622682 8_2:+72525715 Msa1267340:CDS
TCTGAACGGTAATTAGTAGG+AGG 0.623921 8_2:-72525560 None:intergenic
ACTAGTACAATATGCAGCTG+CGG 0.627166 8_2:+72525649 Msa1267340:CDS
GTACCTCTTGATGATGATGA+TGG 0.633918 8_2:-72525353 None:intergenic
AGGTGTTGTTACTACTGTTG+GGG 0.635388 8_2:-72525979 None:intergenic
TCTAACGATAATAATAACAA+AGG 0.638749 8_2:+72523669 Msa1267340:CDS
CAGCAATCGGAGAGAAGGAG+TGG 0.646393 8_2:+72524225 Msa1267340:CDS
AGCAGCAGCAACATCAACCT+AGG 0.647554 8_2:+72525624 Msa1267340:CDS
TATTCTGGAAAAGCTCCCAA+AGG 0.650827 8_2:+72524398 Msa1267340:CDS
AAAATGGAAGGAAGCAGTAG+CGG 0.650928 8_2:+72525479 Msa1267340:CDS
ATGGCAATAGCAGCAGCAGG+AGG 0.651608 8_2:+72523579 Msa1267340:CDS
GTTGGATGGAAACGAAACCC+TGG 0.652572 8_2:-72523753 None:intergenic
TAATTGGGAGACAACGAGGG+AGG 0.654012 8_2:-72525325 None:intergenic
CGTGTAATTGGGAGACAACG+AGG 0.654137 8_2:-72525329 None:intergenic
TTGGATTCCAGTCCCACAGT+CGG 0.664258 8_2:-72525937 None:intergenic
ATGGAAGGAAGCAGTAGCGG+CGG 0.686399 8_2:+72525482 Msa1267340:CDS
GTACTTGGAAAGCCCAAGAG+TGG 0.699274 8_2:-72525525 None:intergenic
GTGTAATTGGGAGACAACGA+GGG 0.701719 8_2:-72525328 None:intergenic
ATATACCAGGAAGTTCCCAA+GGG 0.721658 8_2:-72523872 None:intergenic
TGATGATCACGAGCATGACG+TGG 0.732266 8_2:+72523725 Msa1267340:CDS
GGACTGGAATCCAATCCCTG+AGG 0.753349 8_2:+72525946 Msa1267340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAAATAAATATATACC+AGG - chr8_2:72523888-72523907 None:intergenic 10.0%
!!! TTTTTGATAAATAAATATCT+TGG + chr8_2:72524041-72524060 Msa1267340:intron 10.0%
!! ATATATATATATATGCTATA+TGG - chr8_2:72524836-72524855 None:intergenic 10.0%
!! AAGTATTATTAAATCAAAGA+GGG - chr8_2:72524019-72524038 None:intergenic 15.0%
!!! GTTGTATATGAATATATTTT+AGG - chr8_2:72524959-72524978 None:intergenic 15.0%
!! TCAAATTCAAAATTATTGTA+AGG - chr8_2:72525238-72525257 None:intergenic 15.0%
!! TTTGAATTTGAATTTGAATT+AGG + chr8_2:72525247-72525266 Msa1267340:intron 15.0%
!! TTGAATTTGAATTTGAATTA+GGG + chr8_2:72525248-72525267 Msa1267340:intron 15.0%
!! ATATATGTTATTGAAATCAT+GGG - chr8_2:72526178-72526197 None:intergenic 15.0%
!! TATATATGTTATTGAAATCA+TGG - chr8_2:72526179-72526198 None:intergenic 15.0%
!! TCTAACGATAATAATAACAA+AGG + chr8_2:72523669-72523688 Msa1267340:CDS 20.0%
!!! GAAGTATTATTAAATCAAAG+AGG - chr8_2:72524020-72524039 None:intergenic 20.0%
!! AATATGAAGCAAATAAGTAA+GGG - chr8_2:72524069-72524088 None:intergenic 20.0%
!! AAATATGAAGCAAATAAGTA+AGG - chr8_2:72524070-72524089 None:intergenic 20.0%
!!! AATTATGTGATTGAATTTTG+AGG + chr8_2:72524158-72524177 Msa1267340:intron 20.0%
!!! AATATAGCTCTTTAAAACTA+GGG - chr8_2:72524661-72524680 None:intergenic 20.0%
!!! TAATATAGCTCTTTAAAACT+AGG - chr8_2:72524662-72524681 None:intergenic 20.0%
!!! TATATTATGCATCTTGATTT+TGG + chr8_2:72524682-72524701 Msa1267340:intron 20.0%
!!! ATATTATGCATCTTGATTTT+GGG + chr8_2:72524683-72524702 Msa1267340:intron 20.0%
!! GTGTGTATACTATATATTTA+TGG - chr8_2:72524725-72524744 None:intergenic 20.0%
!!! GAAAGGAATTAATTAATTTG+TGG - chr8_2:72525088-72525107 None:intergenic 20.0%
!! ATGTATTTGCATTATATAGT+AGG - chr8_2:72526072-72526091 None:intergenic 20.0%
! TTATTAAATCAAAGAGGGAT+GGG - chr8_2:72524014-72524033 None:intergenic 25.0%
! ATTATTAAATCAAAGAGGGA+TGG - chr8_2:72524015-72524034 None:intergenic 25.0%
!! TTTTCCAGAATAGAAAACTA+GGG - chr8_2:72524390-72524409 None:intergenic 25.0%
!! ATATACCTTTTGATATCGTT+CGG - chr8_2:72524474-72524493 None:intergenic 25.0%
!! GCAGTTATATTTGGTAATTA+AGG - chr8_2:72524544-72524563 None:intergenic 25.0%
!!! CATTACTGATTTTTCTTTCA+TGG + chr8_2:72524581-72524600 Msa1267340:intron 25.0%
!!! TTTTAAAACCAACAAAGACA+CGG - chr8_2:72524631-72524650 None:intergenic 25.0%
! ATATATATATGCTATATGGC+TGG - chr8_2:72524832-72524851 None:intergenic 25.0%
!! ATGAAATGTATGCCAAATTT+TGG + chr8_2:72525210-72525229 Msa1267340:intron 25.0%
! TATTGTAAGGATCCAAAATT+TGG - chr8_2:72525225-72525244 None:intergenic 25.0%
! TAAGCAGCAAAATGAAATAT+TGG + chr8_2:72525400-72525419 Msa1267340:CDS 25.0%
! AAGCAGCAAAATGAAATATT+GGG + chr8_2:72525401-72525420 Msa1267340:CDS 25.0%
! CAAAATGAAATATTGGGAAT+GGG + chr8_2:72525407-72525426 Msa1267340:CDS 25.0%
! TGATCACATAGTTAACAAAA+TGG + chr8_2:72525463-72525482 Msa1267340:CDS 25.0%
! AGTAATTAGTGATTACTTGA+AGG - chr8_2:72526005-72526024 None:intergenic 25.0%
! TTCAGTTATCAACTTTATGT+AGG + chr8_2:72526116-72526135 Msa1267340:three_prime_UTR 25.0%
! TTCTAATTGCTCTGATTATT+CGG + chr8_2:72526145-72526164 Msa1267340:three_prime_UTR 25.0%
!! TATGTGATTGAATTTTGAGG+TGG + chr8_2:72524161-72524180 Msa1267340:intron 30.0%
ACTGAAAACTTTCGTTCAAT+TGG + chr8_2:72524353-72524372 Msa1267340:CDS 30.0%
!! AAAACCCTAGTTTTCTATTC+TGG + chr8_2:72524383-72524402 Msa1267340:CDS 30.0%
! CTTTTCCAGAATAGAAAACT+AGG - chr8_2:72524391-72524410 None:intergenic 30.0%
ATACTCATTCATAATCCAAC+TGG - chr8_2:72524432-72524451 None:intergenic 30.0%
GCAAAATGAAATATTGGGAA+TGG + chr8_2:72525406-72525425 Msa1267340:CDS 30.0%
ATGTGATCATCAATTGTCTT+TGG - chr8_2:72525452-72525471 None:intergenic 30.0%
CACATAGTTAACAAAATGGA+AGG + chr8_2:72525467-72525486 Msa1267340:CDS 30.0%
AGCAATGTAGACAAATGATT+GGG - chr8_2:72525872-72525891 None:intergenic 30.0%
!! GGAAATTGATTTGGTAACAT+TGG - chr8_2:72525902-72525921 None:intergenic 30.0%
AATTAGTGATTACTTGAAGG+AGG - chr8_2:72526002-72526021 None:intergenic 30.0%
GCATTATATAGTAGGTAGTA+GGG - chr8_2:72526064-72526083 None:intergenic 30.0%
TGCATTATATAGTAGGTAGT+AGG - chr8_2:72526065-72526084 None:intergenic 30.0%
!! AGTTGATAACTGAAATCAAC+TGG - chr8_2:72526110-72526129 None:intergenic 30.0%
TTATTGAAATCATGGGATAC+AGG - chr8_2:72526171-72526190 None:intergenic 30.0%
TGTTAGTTAGTTAGAGAGAG+TGG + chr8_2:72523556-72523575 Msa1267340:five_prime_UTR 35.0%
!! TCCAGAATTGCTTTAGGAAA+GGG - chr8_2:72523975-72523994 None:intergenic 35.0%
!! TTCCAGAATTGCTTTAGGAA+AGG - chr8_2:72523976-72523995 None:intergenic 35.0%
AGGGATGGGAACAAAAAAAA+GGG - chr8_2:72524000-72524019 None:intergenic 35.0%
! TATATGATGATGAGCAGCTT+TGG + chr8_2:72524202-72524221 Msa1267340:intron 35.0%
TTTCGATACTTTCTATCTCG+AGG - chr8_2:72524263-72524282 None:intergenic 35.0%
!! CGAGATAGAAAGTATCGAAA+CGG + chr8_2:72524263-72524282 Msa1267340:CDS 35.0%
! GTGTAACAACTTCTGGTTAT+TGG + chr8_2:72524300-72524319 Msa1267340:CDS 35.0%
CATTCATAATCCAACTGGTT+CGG - chr8_2:72524427-72524446 None:intergenic 35.0%
ATATCGTTCGGTTTCATGTT+GGG - chr8_2:72524462-72524481 None:intergenic 35.0%
TGAAACCGAACGATATCAAA+AGG + chr8_2:72524466-72524485 Msa1267340:CDS 35.0%
CCATCAAGAGCAGTTATATT+TGG - chr8_2:72524553-72524572 None:intergenic 35.0%
CCAAATATAACTGCTCTTGA+TGG + chr8_2:72524550-72524569 Msa1267340:intron 35.0%
TATTGAAACCGTGTCTTTGT+TGG + chr8_2:72524620-72524639 Msa1267340:intron 35.0%
! CTAGCTAGCTACTATTGTTT+TGG - chr8_2:72524789-72524808 None:intergenic 35.0%
TATATATGCTATATGGCTGG+TGG - chr8_2:72524829-72524848 None:intergenic 35.0%
GAGAGGGAATTAATCACAAA+CGG - chr8_2:72524990-72525009 None:intergenic 35.0%
AAATGATCACGAGAGATGAA+AGG - chr8_2:72525105-72525124 None:intergenic 35.0%
!! ATGATGATGGTCGTGTAATT+GGG - chr8_2:72525343-72525362 None:intergenic 35.0%
TCTTCTGAACGGTAATTAGT+AGG - chr8_2:72525566-72525585 None:intergenic 35.0%
ATCCTTCTTCATCTTCTGAA+CGG - chr8_2:72525577-72525596 None:intergenic 35.0%
!! TGATGATGGATGATCTCAAT+AGG + chr8_2:72525780-72525799 Msa1267340:CDS 35.0%
GATTTGGATGATTGAGATGT+GGG - chr8_2:72525850-72525869 None:intergenic 35.0%
GTAGACAAATGATTGGGATT+TGG - chr8_2:72525866-72525885 None:intergenic 35.0%
CAGCAATGTAGACAAATGAT+TGG - chr8_2:72525873-72525892 None:intergenic 35.0%
AAGGAGGTTGGAAATTGATT+TGG - chr8_2:72525911-72525930 None:intergenic 35.0%
AGTTAGTTAGAGAGAGTGGA+TGG + chr8_2:72523560-72523579 Msa1267340:exon 40.0%
TCTACAAGCTCTTCTTCAGT+TGG - chr8_2:72523774-72523793 None:intergenic 40.0%
ATCTTTATCGCTATGACCCT+TGG + chr8_2:72523856-72523875 Msa1267340:CDS 40.0%
TCTTTATCGCTATGACCCTT+GGG + chr8_2:72523857-72523876 Msa1267340:CDS 40.0%
ATATACCAGGAAGTTCCCAA+GGG - chr8_2:72523875-72523894 None:intergenic 40.0%
TATATACCAGGAAGTTCCCA+AGG - chr8_2:72523876-72523895 None:intergenic 40.0%
!! CCAGAATTGCTTTAGGAAAG+GGG - chr8_2:72523974-72523993 None:intergenic 40.0%
AGGGTTTCCAGAATTGCTTT+AGG - chr8_2:72523981-72524000 None:intergenic 40.0%
GAGGGATGGGAACAAAAAAA+AGG - chr8_2:72524001-72524020 None:intergenic 40.0%
CCAGAAGTTGTTACACGATT+AGG - chr8_2:72524296-72524315 None:intergenic 40.0%
CCTAATCGTGTAACAACTTC+TGG + chr8_2:72524293-72524312 Msa1267340:CDS 40.0%
TCTGGTTATTGGAAAGCAAC+AGG + chr8_2:72524311-72524330 Msa1267340:CDS 40.0%
! TATTCTGGAAAAGCTCCCAA+AGG + chr8_2:72524398-72524417 Msa1267340:CDS 40.0%
TATCGTTCGGTTTCATGTTG+GGG - chr8_2:72524461-72524480 None:intergenic 40.0%
GATATCGTTCGGTTTCATGT+TGG - chr8_2:72524463-72524482 None:intergenic 40.0%
!! GTTTTGGTGTGCTATAGCTT+TGG - chr8_2:72524773-72524792 None:intergenic 40.0%
TTAGAAGCCAAGAATGCAAG+AGG + chr8_2:72524869-72524888 Msa1267340:intron 40.0%
TAGAAGCCAAGAATGCAAGA+GGG + chr8_2:72524870-72524889 Msa1267340:intron 40.0%
!! TCATTTTGATAGTCCAGTGC+AGG + chr8_2:72525119-72525138 Msa1267340:intron 40.0%
TCTCTTGTATACCCGACATA+GGG - chr8_2:72525282-72525301 None:intergenic 40.0%
!! GATGATGATGGTCGTGTAAT+TGG - chr8_2:72525344-72525363 None:intergenic 40.0%
!! GTACCTCTTGATGATGATGA+TGG - chr8_2:72525356-72525375 None:intergenic 40.0%
!! TTGGGAATGGGATTTGTTGT+TGG + chr8_2:72525419-72525438 Msa1267340:CDS 40.0%
AAAATGGAAGGAAGCAGTAG+CGG + chr8_2:72525479-72525498 Msa1267340:CDS 40.0%
ATCATGTCACAACCACTCTT+GGG + chr8_2:72525513-72525532 Msa1267340:CDS 40.0%
TCTGAACGGTAATTAGTAGG+AGG - chr8_2:72525563-72525582 None:intergenic 40.0%
TACCGTTCAGAAGATGAAGA+AGG + chr8_2:72525572-72525591 Msa1267340:CDS 40.0%
GCATATTGTACTAGTTGCCT+AGG - chr8_2:72525644-72525663 None:intergenic 40.0%
ACTAGTACAATATGCAGCTG+CGG + chr8_2:72525649-72525668 Msa1267340:CDS 40.0%
GGATTTGGATGATTGAGATG+TGG - chr8_2:72525851-72525870 None:intergenic 40.0%
TGATTATGATCCTCAGGGAT+TGG - chr8_2:72525959-72525978 None:intergenic 40.0%
!! AGGTGTTGTTACTACTGTTG+GGG - chr8_2:72525982-72526001 None:intergenic 40.0%
!! GAGGTGTTGTTACTACTGTT+GGG - chr8_2:72525983-72526002 None:intergenic 40.0%
AAGCTCATGCTGCTCATGTT+AGG - chr8_2:72523621-72523640 None:intergenic 45.0%
ATGAGCTTGAGTCACGAAGA+TGG + chr8_2:72523633-72523652 Msa1267340:CDS 45.0%
AGCTACAGCTACAGTAGTAG+TGG + chr8_2:72523692-72523711 Msa1267340:CDS 45.0%
CAAGCTCTTCTTCAGTTGGA+TGG - chr8_2:72523770-72523789 None:intergenic 45.0%
! AACGTTTTCCCTCGACCTTA+CGG - chr8_2:72523809-72523828 None:intergenic 45.0%
CCCCTTTCCTAAAGCAATTC+TGG + chr8_2:72523971-72523990 Msa1267340:intron 45.0%
AGGGTGAGATATCCCTATGT+CGG + chr8_2:72525267-72525286 Msa1267340:intron 45.0%
CTCTCTTGTATACCCGACAT+AGG - chr8_2:72525283-72525302 None:intergenic 45.0%
GTGTAATTGGGAGACAACGA+GGG - chr8_2:72525331-72525350 None:intergenic 45.0%
CGACCATCATCATCATCAAG+AGG + chr8_2:72525350-72525369 Msa1267340:CDS 45.0%
GATCATGTCACAACCACTCT+TGG + chr8_2:72525512-72525531 Msa1267340:CDS 45.0%
!! AGGAGGAGTATTGCTGTACT+TGG - chr8_2:72525543-72525562 None:intergenic 45.0%
GAACGGTAATTAGTAGGAGG+AGG - chr8_2:72525560-72525579 None:intergenic 45.0%
CTAGTACAATATGCAGCTGC+GGG + chr8_2:72525650-72525669 Msa1267340:CDS 45.0%
TGAAGCTGAGACTGGGAAAA+TGG - chr8_2:72525714-72525733 None:intergenic 45.0%
TACCAGTGCTGCAATGATGA+TGG + chr8_2:72525766-72525785 Msa1267340:CDS 45.0%
ATCCATCATCATTGCAGCAC+TGG - chr8_2:72525771-72525790 None:intergenic 45.0%
TGGGGTGATTATGATCCTCA+GGG - chr8_2:72525964-72525983 None:intergenic 45.0%
TTGGGGTGATTATGATCCTC+AGG - chr8_2:72525965-72525984 None:intergenic 45.0%
!! GGAGGTGTTGTTACTACTGT+TGG - chr8_2:72525984-72526003 None:intergenic 45.0%
TGATGATCACGAGCATGACG+TGG + chr8_2:72523725-72523744 Msa1267340:CDS 50.0%
AGCATGACGTGGTTATGCCA+GGG + chr8_2:72523736-72523755 Msa1267340:CDS 50.0%
GTTGGATGGAAACGAAACCC+TGG - chr8_2:72523756-72523775 None:intergenic 50.0%
AGAGTTCTACCTTCGCCGTA+AGG + chr8_2:72523791-72523810 Msa1267340:CDS 50.0%
TATGACCCTTGGGAACTTCC+TGG + chr8_2:72523867-72523886 Msa1267340:CDS 50.0%
! TGAGCAGCTTTGGCAGCAAT+CGG + chr8_2:72524212-72524231 Msa1267340:intron 50.0%
TTTGGCAGCAATCGGAGAGA+AGG + chr8_2:72524220-72524239 Msa1267340:CDS 50.0%
GGAAAGCAACAGGAGCAGAT+AGG + chr8_2:72524321-72524340 Msa1267340:CDS 50.0%
!! CAACTGGTTCGGATGCCTTT+GGG - chr8_2:72524416-72524435 None:intergenic 50.0%
AGCTAGCTGCGTGAAACTTG+CGG + chr8_2:72524803-72524822 Msa1267340:intron 50.0%
CTCTCTCCCTCTTGCATTCT+TGG - chr8_2:72524879-72524898 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+GGG - chr8_2:72525006-72525025 None:intergenic 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr8_2:72525005-72525024 None:intergenic 50.0%
GTACAGTAGTCTACCTGCAC+TGG - chr8_2:72525135-72525154 None:intergenic 50.0%
GGGTGAGATATCCCTATGTC+GGG + chr8_2:72525268-72525287 Msa1267340:intron 50.0%
TGTCGGGTATACAAGAGAGC+AGG + chr8_2:72525284-72525303 Msa1267340:CDS 50.0%
AATTGGGAGACAACGAGGGA+GGG - chr8_2:72525327-72525346 None:intergenic 50.0%
TAATTGGGAGACAACGAGGG+AGG - chr8_2:72525328-72525347 None:intergenic 50.0%
CGTGTAATTGGGAGACAACG+AGG - chr8_2:72525332-72525351 None:intergenic 50.0%
GTACTTGGAAAGCCCAAGAG+TGG - chr8_2:72525528-72525547 None:intergenic 50.0%
AGCAGCAGCAACATCAACCT+AGG + chr8_2:72525624-72525643 Msa1267340:CDS 50.0%
! TCTCTGTTAGTCTCCGCTTG+TGG + chr8_2:72525677-72525696 Msa1267340:CDS 50.0%
TTTCCCAGTCTCAGCTTCAG+CGG + chr8_2:72525715-72525734 Msa1267340:CDS 50.0%
!! TGCAGCACTGGTAGCAGTAT+TGG - chr8_2:72525759-72525778 None:intergenic 50.0%
TTGGATTCCAGTCCCACAGT+CGG - chr8_2:72525940-72525959 None:intergenic 50.0%
TGGATGGCAATAGCAGCAGC+AGG + chr8_2:72523576-72523595 Msa1267340:exon 55.0%
ATGGCAATAGCAGCAGCAGG+AGG + chr8_2:72523579-72523598 Msa1267340:CDS 55.0%
GAGCATGACGTGGTTATGCC+AGG + chr8_2:72523735-72523754 Msa1267340:CDS 55.0%
TACCTTCGCCGTAAGGTCGA+GGG + chr8_2:72523798-72523817 Msa1267340:CDS 55.0%
CAGCAATCGGAGAGAAGGAG+TGG + chr8_2:72524225-72524244 Msa1267340:CDS 55.0%
!! CCAACTGGTTCGGATGCCTT+TGG - chr8_2:72524417-72524436 None:intergenic 55.0%
!! CCAAAGGCATCCGAACCAGT+TGG + chr8_2:72524414-72524433 Msa1267340:CDS 55.0%
ATGGAAGGAAGCAGTAGCGG+CGG + chr8_2:72525482-72525501 Msa1267340:CDS 55.0%
! CTGTTAGTCTCCGCTTGTGG+TGG + chr8_2:72525680-72525699 Msa1267340:CDS 55.0%
TTAGTCTCCGCTTGTGGTGG+CGG + chr8_2:72525683-72525702 Msa1267340:CDS 55.0%
AGTCGGTCAGAGAAGGAGGT+TGG - chr8_2:72525923-72525942 None:intergenic 55.0%
CTCCTTCTCTGACCGACTGT+GGG + chr8_2:72525925-72525944 Msa1267340:CDS 55.0%
GGACTGGAATCCAATCCCTG+AGG + chr8_2:72525946-72525965 Msa1267340:CDS 55.0%
CTACCTTCGCCGTAAGGTCG+AGG + chr8_2:72523797-72523816 Msa1267340:CDS 60.0%
TTCCCTCGACCTTACGGCGA+AGG - chr8_2:72523803-72523822 None:intergenic 60.0%
CTGCCGCTGAAGCTGAGACT+GGG - chr8_2:72525721-72525740 None:intergenic 60.0%
CCACAGTCGGTCAGAGAAGG+AGG - chr8_2:72525927-72525946 None:intergenic 60.0%
CCTCCTTCTCTGACCGACTG+TGG + chr8_2:72525924-72525943 Msa1267340:CDS 60.0%
GTCCCACAGTCGGTCAGAGA+AGG - chr8_2:72525930-72525949 None:intergenic 60.0%
TCTCTGACCGACTGTGGGAC+TGG + chr8_2:72525930-72525949 Msa1267340:CDS 60.0%
GGGAGACAACGAGGGAGGGA+GGG - chr8_2:72525323-72525342 None:intergenic 65.0%
TGGGAGACAACGAGGGAGGG+AGG - chr8_2:72525324-72525343 None:intergenic 65.0%
GCTGCCGCTGAAGCTGAGAC+TGG - chr8_2:72525722-72525741 None:intergenic 65.0%
GGCGCTGCCGCCACCACAAG+CGG - chr8_2:72525693-72525712 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 72523542 72526252 72523542 ID=Msa1267340;Name=Msa1267340
chr8_2 mRNA 72523542 72526252 72523542 ID=Msa1267340-mRNA-1;Parent=Msa1267340;Name=Msa1267340-mRNA-1;_AED=0.02;_eAED=0.02;_QI=37|1|1|1|1|1|3|240|440
chr8_2 exon 72523542 72523888 72523542 ID=Msa1267340-mRNA-1:exon:24559;Parent=Msa1267340-mRNA-1
chr8_2 exon 72524219 72524487 72524219 ID=Msa1267340-mRNA-1:exon:24560;Parent=Msa1267340-mRNA-1
chr8_2 exon 72525269 72526252 72525269 ID=Msa1267340-mRNA-1:exon:24561;Parent=Msa1267340-mRNA-1
chr8_2 five_prime_UTR 72523542 72523578 72523542 ID=Msa1267340-mRNA-1:five_prime_utr;Parent=Msa1267340-mRNA-1
chr8_2 CDS 72523579 72523888 72523579 ID=Msa1267340-mRNA-1:cds;Parent=Msa1267340-mRNA-1
chr8_2 CDS 72524219 72524487 72524219 ID=Msa1267340-mRNA-1:cds;Parent=Msa1267340-mRNA-1
chr8_2 CDS 72525269 72526012 72525269 ID=Msa1267340-mRNA-1:cds;Parent=Msa1267340-mRNA-1
chr8_2 three_prime_UTR 72526013 72526252 72526013 ID=Msa1267340-mRNA-1:three_prime_utr;Parent=Msa1267340-mRNA-1
Gene Sequence

>Msa1267340

ATGGCAATAGCAGCAGCAGGAGGAGCAGCAACATCATCACCTAACATGAGCAGCATGAGCTTGAGTCACGAAGATGGAACTGCTACTACTTCTAACGATAATAATAACAAAGGAGCTACAGCTACAGTAGTAGTGGATGATGATGATGATGATCACGAGCATGACGTGGTTATGCCAGGGTTTCGTTTCCATCCAACTGAAGAAGAGCTTGTAGAGTTCTACCTTCGCCGTAAGGTCGAGGGAAAACGTTTCAACGTTGAGCTTATTACTTTTCTCGATCTTTATCGCTATGACCCTTGGGAACTTCCTGCTTTGGCAGCAATCGGAGAGAAGGAGTGGTACTTTTATGTGCCTCGAGATAGAAAGTATCGAAACGGTGATCGTCCTAATCGTGTAACAACTTCTGGTTATTGGAAAGCAACAGGAGCAGATAGGATGATTCGAACTGAAAACTTTCGTTCAATTGGACTCAAGAAAACCCTAGTTTTCTATTCTGGAAAAGCTCCCAAAGGCATCCGAACCAGTTGGATTATGAATGAGTATAGATTACCCCAACATGAAACCGAACGATATCAAAAGGGTGAGATATCCCTATGTCGGGTATACAAGAGAGCAGGAGTAGAAGATCATCCCTCCCTCCCTCGTTGTCTCCCAATTACACGACCATCATCATCATCAAGAGGTACTACTGCTTCACATTCAGACAAGAATAAGCAGCAAAATGAAATATTGGGAATGGGATTTGTTGTTGGACAATCACCAAAGACAATTGATGATCACATAGTTAACAAAATGGAAGGAAGCAGTAGCGGCGGTAATTCAGATCATGTCACAACCACTCTTGGGCTTTCCAAGTACAGCAATACTCCTCCTCCTACTAATTACCGTTCAGAAGATGAAGAAGGATTGATGATGATGCAGCAGCAGCAGCAGCAGCAGCAGCAACATCAACCTAGGCAACTAGTACAATATGCAGCTGCGGGAAACTCTCTGTTAGTCTCCGCTTGTGGTGGCGGCAGCGCCATTTTCCCAGTCTCAGCTTCAGCGGCAGCAGCAGTGAGCTGTTCCAATACTGCTACCAGTGCTGCAATGATGATGGATGATCTCAATAGGCTTGTAAGTTATCAACAACAGCAATATTGTTACAATGTTCAAAACCCACATCTCAATCATCCAAATCCCAATCATTTGTCTACATTGCTGATGCAACCAATGTTACCAAATCAATTTCCAACCTCCTTCTCTGACCGACTGTGGGACTGGAATCCAATCCCTGAGGATCATAATCACCCCAACAGTAGTAACAACACCTCCTTCAAGTAA
Protein sequence

>Msa1267340

MAIAAAGGAATSSPNMSSMSLSHEDGTATTSNDNNNKGATATVVVDDDDDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKGEISLCRVYKRAGVEDHPSLPRCLPITRPSSSSRGTTASHSDKNKQQNEILGMGFVVGQSPKTIDDHIVNKMEGSSSGGNSDHVTTTLGLSKYSNTPPPTNYRSEDEEGLMMMQQQQQQQQQHQPRQLVQYAAAGNSLLVSACGGGSAIFPVSASAAAAVSCSNTATSAAMMMDDLNRLVSYQQQQYCYNVQNPHLNHPNPNHLSTLLMQPMLPNQFPTSFSDRLWDWNPIPEDHNHPNSSNNTSFK*