Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457470 | XP_013460238.1 | 94.118 | 204 | 3 | 2 | 1 | 196 | 1 | 203 | 2.49e-131 | 377 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457470 | sp|Q8LDP4|CP19D_ARATH | 82.843 | 204 | 24 | 2 | 1 | 196 | 1 | 201 | 1.57e-117 | 334 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457470 | I3S3K3 | 94.118 | 204 | 3 | 2 | 1 | 196 | 1 | 203 | 1.19e-131 | 377 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0457470 | 0.818943 | 1.505284e-52 | -8.615850e-47 |
| Msa0002540 | Msa0457470 | 0.812516 | 4.076374e-51 | -8.615850e-47 |
| Msa0003700 | Msa0457470 | 0.803292 | 3.737902e-49 | -8.615850e-47 |
| Msa0003930 | Msa0457470 | 0.805629 | 1.217083e-49 | -8.615850e-47 |
| Msa0009760 | Msa0457470 | 0.816205 | 6.235313e-52 | -8.615850e-47 |
| Msa0016670 | Msa0457470 | 0.828097 | 1.086550e-54 | -8.615850e-47 |
| Msa0017510 | Msa0457470 | 0.817662 | 2.935323e-52 | -8.615850e-47 |
| Msa0028420 | Msa0457470 | 0.816423 | 5.573437e-52 | -8.615850e-47 |
| Msa0032430 | Msa0457470 | 0.817433 | 3.306225e-52 | -8.615850e-47 |
| Msa0032920 | Msa0457470 | -0.802102 | 6.579327e-49 | -8.615850e-47 |
| Msa0034270 | Msa0457470 | 0.812836 | 3.468829e-51 | -8.615850e-47 |
| Msa0040690 | Msa0457470 | 0.828310 | 9.654943e-55 | -8.615850e-47 |
| Msa0045790 | Msa0457470 | 0.805563 | 1.256977e-49 | -8.615850e-47 |
| Msa0046100 | Msa0457470 | 0.822503 | 2.287258e-53 | -8.615850e-47 |
| Msa0046160 | Msa0457470 | 0.800275 | 1.555433e-48 | -8.615850e-47 |
| Msa0047070 | Msa0457470 | 0.816019 | 6.859831e-52 | -8.615850e-47 |
| Msa0061340 | Msa0457470 | 0.803335 | 3.662351e-49 | -8.615850e-47 |
| Msa0074320 | Msa0457470 | 0.826291 | 2.940675e-54 | -8.615850e-47 |
| Msa0078650 | Msa0457470 | 0.812063 | 5.119775e-51 | -8.615850e-47 |
| Msa0081520 | Msa0457470 | 0.815698 | 8.089905e-52 | -8.615850e-47 |
| Msa0089380 | Msa0457470 | 0.802660 | 5.047753e-49 | -8.615850e-47 |
| Msa0089630 | Msa0457470 | 0.805374 | 1.376694e-49 | -8.615850e-47 |
| Msa0094120 | Msa0457470 | 0.842308 | 2.799055e-58 | -8.615850e-47 |
| Msa0094850 | Msa0457470 | 0.810414 | 1.166766e-50 | -8.615850e-47 |
| Msa0110970 | Msa0457470 | 0.830843 | 2.337429e-55 | -8.615850e-47 |
| Msa0124060 | Msa0457470 | 0.817861 | 2.646804e-52 | -8.615850e-47 |
| Msa0124340 | Msa0457470 | 0.810386 | 1.182690e-50 | -8.615850e-47 |
| Msa0128860 | Msa0457470 | 0.811837 | 5.732036e-51 | -8.615850e-47 |
| Msa0134180 | Msa0457470 | 0.802086 | 6.627990e-49 | -8.615850e-47 |
| Msa0136070 | Msa0457470 | 0.800666 | 1.294709e-48 | -8.615850e-47 |
| Msa0136100 | Msa0457470 | 0.805045 | 1.613477e-49 | -8.615850e-47 |
| Msa0146260 | Msa0457470 | 0.827262 | 1.724315e-54 | -8.615850e-47 |
| Msa0152400 | Msa0457470 | 0.809767 | 1.608305e-50 | -8.615850e-47 |
| Msa0157290 | Msa0457470 | 0.816729 | 4.759921e-52 | -8.615850e-47 |
| Msa0168500 | Msa0457470 | 0.829300 | 5.561240e-55 | -8.615850e-47 |
| Msa0172070 | Msa0457470 | 0.820218 | 7.705033e-53 | -8.615850e-47 |
| Msa0173890 | Msa0457470 | 0.806686 | 7.291328e-50 | -8.615850e-47 |
| Msa0174730 | Msa0457470 | 0.812762 | 3.602045e-51 | -8.615850e-47 |
| Msa0186890 | Msa0457470 | 0.808823 | 2.562460e-50 | -8.615850e-47 |
| Msa0187690 | Msa0457470 | 0.822718 | 2.038882e-53 | -8.615850e-47 |
| Msa0187930 | Msa0457470 | 0.807481 | 4.949081e-50 | -8.615850e-47 |
| Msa0194540 | Msa0457470 | 0.817620 | 3.000724e-52 | -8.615850e-47 |
| Msa0195630 | Msa0457470 | 0.818120 | 2.313308e-52 | -8.615850e-47 |
| Msa0197420 | Msa0457470 | 0.804780 | 1.833267e-49 | -8.615850e-47 |
| Msa0211150 | Msa0457470 | 0.811830 | 5.754312e-51 | -8.615850e-47 |
| Msa0225680 | Msa0457470 | 0.801021 | 1.095928e-48 | -8.615850e-47 |
| Msa0225740 | Msa0457470 | 0.847322 | 1.244291e-59 | -8.615850e-47 |
| Msa0237410 | Msa0457470 | 0.807841 | 4.150794e-50 | -8.615850e-47 |
| Msa0369850 | Msa0457470 | 0.828254 | 9.956629e-55 | -8.615850e-47 |
| Msa0376040 | Msa0457470 | 0.801324 | 9.499270e-49 | -8.615850e-47 |
| Msa0402650 | Msa0457470 | 0.805986 | 1.024316e-49 | -8.615850e-47 |
| Msa0410500 | Msa0457470 | 0.825490 | 4.557321e-54 | -8.615850e-47 |
| Msa0417880 | Msa0457470 | 0.832143 | 1.118147e-55 | -8.615850e-47 |
| Msa0422850 | Msa0457470 | 0.803909 | 2.783643e-49 | -8.615850e-47 |
| Msa0422930 | Msa0457470 | 0.802196 | 6.292194e-49 | -8.615850e-47 |
| Msa0428150 | Msa0457470 | 0.800722 | 1.261068e-48 | -8.615850e-47 |
| Msa0452960 | Msa0457470 | 0.824149 | 9.440267e-54 | -8.615850e-47 |
| Msa0457470 | Msa0467300 | 0.811151 | 8.079715e-51 | -8.615850e-47 |
| Msa0457470 | Msa0467490 | 0.834000 | 3.858542e-56 | -8.615850e-47 |
| Msa0457470 | Msa0469030 | 0.809123 | 2.210529e-50 | -8.615850e-47 |
| Msa0457470 | Msa0474950 | 0.813026 | 3.152122e-51 | -8.615850e-47 |
| Msa0457470 | Msa0475790 | 0.814823 | 1.266024e-51 | -8.615850e-47 |
| Msa0457470 | Msa0479170 | 0.814636 | 1.393035e-51 | -8.615850e-47 |
| Msa0457470 | Msa0490390 | 0.800445 | 1.436333e-48 | -8.615850e-47 |
| Msa0457470 | Msa0498060 | 0.816830 | 4.517552e-52 | -8.615850e-47 |
| Msa0457470 | Msa0507680 | 0.802759 | 4.816961e-49 | -8.615850e-47 |
| Msa0457470 | Msa0516040 | 0.802857 | 4.597143e-49 | -8.615850e-47 |
| Msa0457470 | Msa0541860 | 0.809208 | 2.120021e-50 | -8.615850e-47 |
| Msa0457470 | Msa0546680 | 0.837892 | 3.975734e-57 | -8.615850e-47 |
| Msa0457470 | Msa0547720 | 0.807021 | 6.195570e-50 | -8.615850e-47 |
| Msa0457470 | Msa0563560 | 0.825751 | 3.952290e-54 | -8.615850e-47 |
| Msa0457470 | Msa0569200 | 0.829091 | 6.248459e-55 | -8.615850e-47 |
| Msa0457470 | Msa0608320 | 0.800923 | 1.147771e-48 | -8.615850e-47 |
| Msa0457470 | Msa0616020 | 0.824534 | 7.661227e-54 | -8.615850e-47 |
| Msa0457470 | Msa0616160 | 0.819991 | 8.683762e-53 | -8.615850e-47 |
| Msa0457470 | Msa0620990 | 0.809621 | 1.728856e-50 | -8.615850e-47 |
| Msa0457470 | Msa0623330 | 0.800570 | 1.354650e-48 | -8.615850e-47 |
| Msa0457470 | Msa0626450 | 0.819653 | 1.037176e-52 | -8.615850e-47 |
| Msa0457470 | Msa0626490 | 0.822394 | 2.425338e-53 | -8.615850e-47 |
| Msa0457470 | Msa0650020 | 0.812883 | 3.388829e-51 | -8.615850e-47 |
| Msa0457470 | Msa0655560 | 0.819227 | 1.297612e-52 | -8.615850e-47 |
| Msa0457470 | Msa0664600 | 0.820690 | 6.003915e-53 | -8.615850e-47 |
| Msa0457470 | Msa0669520 | 0.826184 | 3.118765e-54 | -8.615850e-47 |
| Msa0457470 | Msa0677410 | 0.803069 | 4.156790e-49 | -8.615850e-47 |
| Msa0457470 | Msa0682330 | 0.826576 | 2.515163e-54 | -8.615850e-47 |
| Msa0457470 | Msa0683510 | 0.811012 | 8.662225e-51 | -8.615850e-47 |
| Msa0457470 | Msa0696450 | 0.800064 | 1.717163e-48 | -8.615850e-47 |
| Msa0457470 | Msa0701280 | 0.803105 | 4.085695e-49 | -8.615850e-47 |
| Msa0457470 | Msa0702340 | 0.806512 | 7.934880e-50 | -8.615850e-47 |
| Msa0457470 | Msa0702590 | 0.801884 | 7.294825e-49 | -8.615850e-47 |
| Msa0457470 | Msa0702660 | 0.804875 | 1.751110e-49 | -8.615850e-47 |
| Msa0457470 | Msa0703230 | 0.808182 | 3.511145e-50 | -8.615850e-47 |
| Msa0457470 | Msa0708520 | 0.814799 | 1.281869e-51 | -8.615850e-47 |
| Msa0457470 | Msa0722810 | 0.822257 | 2.609314e-53 | -8.615850e-47 |
| Msa0457470 | Msa0722960 | 0.809239 | 2.087606e-50 | -8.615850e-47 |
| Msa0457470 | Msa0725050 | 0.808984 | 2.366841e-50 | -8.615850e-47 |
| Msa0457470 | Msa0730430 | 0.821838 | 3.263700e-53 | -8.615850e-47 |
| Msa0457470 | Msa0738040 | 0.811277 | 7.587549e-51 | -8.615850e-47 |
| Msa0457470 | Msa0750880 | 0.806858 | 6.704987e-50 | -8.615850e-47 |
| Msa0457470 | Msa0754520 | 0.807369 | 5.226629e-50 | -8.615850e-47 |
| Msa0457470 | Msa0760380 | 0.809816 | 1.569159e-50 | -8.615850e-47 |
| Msa0457470 | Msa0763830 | 0.836216 | 1.065933e-56 | -8.615850e-47 |
| Msa0457470 | Msa0767300 | 0.815668 | 8.214661e-52 | -8.615850e-47 |
| Msa0457470 | Msa0777990 | 0.815491 | 8.997730e-52 | -8.615850e-47 |
| Msa0457470 | Msa0797930 | 0.802322 | 5.927579e-49 | -8.615850e-47 |
| Msa0457470 | Msa0803890 | 0.802628 | 5.127138e-49 | -8.615850e-47 |
| Msa0457470 | Msa0828560 | 0.814370 | 1.594974e-51 | -8.615850e-47 |
| Msa0457470 | Msa0833220 | 0.817784 | 2.755545e-52 | -8.615850e-47 |
| Msa0457470 | Msa0850960 | 0.800955 | 1.130694e-48 | -8.615850e-47 |
| Msa0457470 | Msa0861510 | 0.806241 | 9.049436e-50 | -8.615850e-47 |
| Msa0457470 | Msa0861600 | 0.802462 | 5.547266e-49 | -8.615850e-47 |
| Msa0457470 | Msa0861870 | 0.805382 | 1.371558e-49 | -8.615850e-47 |
| Msa0457470 | Msa0866520 | 0.800934 | 1.141863e-48 | -8.615850e-47 |
| Msa0457470 | Msa0880140 | 0.815591 | 8.547728e-52 | -8.615850e-47 |
| Msa0457470 | Msa0944190 | 0.808567 | 2.907204e-50 | -8.615850e-47 |
| Msa0457470 | Msa0945110 | 0.803355 | 3.627321e-49 | -8.615850e-47 |
| Msa0457470 | Msa0954550 | 0.802356 | 5.831739e-49 | -8.615850e-47 |
| Msa0457470 | Msa1003750 | 0.801428 | 9.046286e-49 | -8.615850e-47 |
| Msa0457470 | Msa1020670 | 0.802775 | 4.781258e-49 | -8.615850e-47 |
| Msa0457470 | Msa1029250 | 0.815009 | 1.151219e-51 | -8.615850e-47 |
| Msa0457470 | Msa1031930 | 0.813638 | 2.312529e-51 | -8.615850e-47 |
| Msa0457470 | Msa1051830 | 0.804442 | 2.156525e-49 | -8.615850e-47 |
| Msa0457470 | Msa1059960 | 0.808340 | 3.250390e-50 | -8.615850e-47 |
| Msa0457470 | Msa1066490 | 0.830365 | 3.060442e-55 | -8.615850e-47 |
| Msa0457470 | Msa1071770 | 0.803133 | 4.032365e-49 | -8.615850e-47 |
| Msa0457470 | Msa1079230 | 0.807214 | 5.639646e-50 | -8.615850e-47 |
| Msa0457470 | Msa1082500 | 0.803698 | 3.078593e-49 | -8.615850e-47 |
| Msa0457470 | Msa1105160 | 0.803765 | 2.981516e-49 | -8.615850e-47 |
| Msa0457470 | Msa1106700 | 0.810959 | 8.891542e-51 | -8.615850e-47 |
| Msa0457470 | Msa1108160 | 0.803279 | 3.760414e-49 | -8.615850e-47 |
| Msa0457470 | Msa1111130 | 0.807720 | 4.403183e-50 | -8.615850e-47 |
| Msa0457470 | Msa1113340 | 0.801312 | 9.555839e-49 | -8.615850e-47 |
| Msa0457470 | Msa1124110 | 0.841454 | 4.704695e-58 | -8.615850e-47 |
| Msa0457470 | Msa1127890 | 0.822798 | 1.952980e-53 | -8.615850e-47 |
| Msa0457470 | Msa1143650 | 0.806948 | 6.419332e-50 | -8.615850e-47 |
| Msa0457470 | Msa1154710 | 0.804842 | 1.778900e-49 | -8.615850e-47 |
| Msa0457470 | Msa1168950 | 0.840082 | 1.076932e-57 | -8.615850e-47 |
| Msa0457470 | Msa1169040 | 0.841955 | 3.470351e-58 | -8.615850e-47 |
| Msa0457470 | Msa1179940 | 0.817788 | 2.749608e-52 | -8.615850e-47 |
| Msa0457470 | Msa1179970 | 0.808366 | 3.208450e-50 | -8.615850e-47 |
| Msa0457470 | Msa1183120 | 0.835411 | 1.704500e-56 | -8.615850e-47 |
| Msa0457470 | Msa1200370 | 0.801343 | 9.416713e-49 | -8.615850e-47 |
| Msa0457470 | Msa1203710 | 0.803741 | 3.015819e-49 | -8.615850e-47 |
| Msa0457470 | Msa1209460 | 0.829232 | 5.775976e-55 | -8.615850e-47 |
| Msa0457470 | Msa1224840 | 0.801117 | 1.047642e-48 | -8.615850e-47 |
| Msa0457470 | Msa1225700 | 0.812568 | 3.971775e-51 | -8.615850e-47 |
| Msa0457470 | Msa1229500 | 0.810694 | 1.014913e-50 | -8.615850e-47 |
| Msa0457470 | Msa1236100 | 0.835397 | 1.718981e-56 | -8.615850e-47 |
| Msa0457470 | Msa1252190 | 0.828850 | 7.147019e-55 | -8.615850e-47 |
| Msa0457470 | Msa1269480 | 0.824342 | 8.500986e-54 | -8.615850e-47 |
| Msa0457470 | Msa1270610 | 0.829417 | 5.209470e-55 | -8.615850e-47 |
| Msa0457470 | Msa1271990 | 0.833519 | 5.089586e-56 | -8.615850e-47 |
| Msa0457470 | Msa1272900 | 0.810271 | 1.252550e-50 | -8.615850e-47 |
| Msa0457470 | Msa1276660 | 0.814793 | 1.285552e-51 | -8.615850e-47 |
| Msa0457470 | Msa1283840 | 0.821467 | 3.976493e-53 | -8.615850e-47 |
| Msa0457470 | Msa1292830 | 0.838621 | 2.579353e-57 | -8.615850e-47 |
| Msa0457470 | Msa1307950 | 0.812725 | 3.668969e-51 | -8.615850e-47 |
| Msa0457470 | Msa1320410 | 0.802708 | 4.935886e-49 | -8.615850e-47 |
| Msa0457470 | Msa1324080 | 0.804641 | 1.959106e-49 | -8.615850e-47 |
| Msa0457470 | Msa1328710 | 0.809211 | 2.116464e-50 | -8.615850e-47 |
| Msa0457470 | Msa1343070 | 0.809714 | 1.650350e-50 | -8.615850e-47 |
| Msa0457470 | Msa1346370 | 0.801712 | 7.909760e-49 | -8.615850e-47 |
| Msa0457470 | Msa1353060 | 0.804335 | 2.270093e-49 | -8.615850e-47 |
| Msa0457470 | Msa1366600 | 0.824125 | 9.559948e-54 | -8.615850e-47 |
| Msa0457470 | Msa1369150 | 0.823783 | 1.150054e-53 | -8.615850e-47 |
| Msa0457470 | Msa1373330 | 0.818482 | 1.915616e-52 | -8.615850e-47 |
| Msa0457470 | Msa1374040 | 0.824917 | 6.225694e-54 | -8.615850e-47 |
| Msa0457470 | Msa1374120 | 0.821667 | 3.574100e-53 | -8.615850e-47 |
| Msa0457470 | Msa1375560 | 0.811661 | 6.261462e-51 | -8.615850e-47 |
| Msa0457470 | Msa1379760 | 0.812132 | 4.944778e-51 | -8.615850e-47 |
| Msa0457470 | Msa1418090 | 0.801601 | 8.336236e-49 | -8.615850e-47 |
| Msa0457470 | Msa1422580 | 0.822716 | 2.040862e-53 | -8.615850e-47 |
| Msa0457470 | Msa1423350 | 0.816657 | 4.939686e-52 | -8.615850e-47 |
| Msa0457470 | Msa1430690 | 0.988079 | 1.238579e-172 | -8.615850e-47 |
| Msa0457470 | Msa1437940 | 0.802754 | 4.827366e-49 | -8.615850e-47 |
| Msa0457470 | Msa1440960 | 0.804676 | 1.926961e-49 | -8.615850e-47 |
| Msa0457470 | Msa1446810 | 0.802371 | 5.791087e-49 | -8.615850e-47 |
| Msa0457470 | Msa1448510 | 0.805937 | 1.048971e-49 | -8.615850e-47 |
| Msa0457470 | Msa1448690 | 0.802439 | 5.606918e-49 | -8.615850e-47 |
| Msa0457470 | Msa1452120 | 0.810900 | 9.156177e-51 | -8.615850e-47 |
| Msa0457470 | Msa1459380 | 0.824262 | 8.877615e-54 | -8.615850e-47 |
| Msa0457470 | Msa1464810 | 0.809411 | 1.917184e-50 | -8.615850e-47 |
| Msa0244780 | Msa0457470 | 0.803265 | 3.785025e-49 | -8.615850e-47 |
| Msa0268130 | Msa0457470 | 0.813805 | 2.125628e-51 | -8.615850e-47 |
| Msa0277180 | Msa0457470 | 0.800368 | 1.489632e-48 | -8.615850e-47 |
| Msa0292400 | Msa0457470 | 0.826914 | 2.088501e-54 | -8.615850e-47 |
| Msa0298990 | Msa0457470 | 0.806496 | 7.996923e-50 | -8.615850e-47 |
| Msa0334040 | Msa0457470 | 0.803438 | 3.485997e-49 | -8.615850e-47 |
| Msa0339500 | Msa0457470 | 0.817996 | 2.467812e-52 | -8.615850e-47 |
| Msa0341910 | Msa0457470 | 0.800503 | 1.397738e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457470 | MtrunA17_Chr3g0104751 | 94.118 | 204 | 3 | 2 | 1 | 196 | 1 | 203 | 2.29e-135 | 377 |
| Msa0457470 | MtrunA17_Chr3g0113441 | 78.977 | 176 | 29 | 1 | 27 | 194 | 56 | 231 | 2.17e-98 | 284 |
| Msa0457470 | MtrunA17_Chr4g0038431 | 63.529 | 170 | 54 | 1 | 33 | 194 | 2 | 171 | 2.59e-74 | 221 |
| Msa0457470 | MtrunA17_Chr7g0274841 | 64.671 | 167 | 51 | 1 | 36 | 194 | 5 | 171 | 7.02e-74 | 220 |
| Msa0457470 | MtrunA17_Chr3g0145501 | 64.072 | 167 | 52 | 1 | 36 | 194 | 13 | 179 | 1.04e-70 | 213 |
| Msa0457470 | MtrunA17_Chr4g0037281 | 55.500 | 200 | 78 | 4 | 7 | 195 | 17 | 216 | 9.60e-70 | 211 |
| Msa0457470 | MtrunA17_Chr1g0193711 | 59.259 | 189 | 60 | 3 | 18 | 196 | 68 | 249 | 3.17e-68 | 208 |
| Msa0457470 | MtrunA17_Chr7g0270991 | 56.085 | 189 | 63 | 4 | 21 | 196 | 78 | 259 | 1.05e-65 | 202 |
| Msa0457470 | MtrunA17_Chr1g0213971 | 60.452 | 177 | 51 | 4 | 32 | 196 | 74 | 243 | 1.02e-64 | 199 |
| Msa0457470 | MtrunA17_Chr7g0260441 | 61.078 | 167 | 56 | 2 | 37 | 194 | 9 | 175 | 4.55e-61 | 201 |
| Msa0457470 | MtrunA17_Chr8g0374621 | 56.213 | 169 | 64 | 3 | 36 | 194 | 5 | 173 | 3.53e-55 | 179 |
| Msa0457470 | MtrunA17_Chr4g0045321 | 53.216 | 171 | 68 | 4 | 36 | 195 | 5 | 174 | 1.48e-52 | 172 |
| Msa0457470 | MtrunA17_Chr8g0353571 | 54.217 | 166 | 68 | 4 | 37 | 194 | 20 | 185 | 3.76e-52 | 165 |
| Msa0457470 | MtrunA17_Chr3g0138061 | 46.328 | 177 | 82 | 3 | 30 | 193 | 1 | 177 | 1.02e-40 | 146 |
| Msa0457470 | MtrunA17_Chr1g0149061 | 48.256 | 172 | 79 | 3 | 31 | 193 | 3 | 173 | 1.95e-40 | 145 |
| Msa0457470 | MtrunA17_Chr7g0266721 | 49.600 | 125 | 59 | 3 | 49 | 172 | 19 | 140 | 2.98e-33 | 116 |
| Msa0457470 | MtrunA17_Chr2g0321111 | 49.650 | 143 | 65 | 5 | 49 | 188 | 471 | 609 | 1.71e-32 | 122 |
| Msa0457470 | MtrunA17_Chr8g0351571 | 47.287 | 129 | 62 | 4 | 47 | 173 | 8 | 132 | 4.68e-26 | 98.2 |
| Msa0457470 | MtrunA17_Chr5g0401141 | 54.082 | 98 | 43 | 2 | 77 | 173 | 380 | 476 | 1.46e-24 | 100 |
| Msa0457470 | MtrunA17_Chr3g0122871 | 60.317 | 63 | 25 | 0 | 120 | 182 | 56 | 118 | 8.96e-22 | 85.9 |
| Msa0457470 | MtrunA17_Chr2g0288371 | 44.737 | 114 | 50 | 6 | 77 | 182 | 48 | 156 | 1.22e-18 | 83.2 |
| Msa0457470 | MtrunA17_Chr6g0484281 | 36.000 | 150 | 83 | 5 | 49 | 188 | 10 | 156 | 8.76e-17 | 77.8 |
| Msa0457470 | MtrunA17_Chr8g0357591 | 35.333 | 150 | 84 | 5 | 49 | 188 | 10 | 156 | 1.19e-15 | 74.3 |
| Msa0457470 | MtrunA17_Chr1g0199071 | 32.414 | 145 | 85 | 7 | 49 | 190 | 89 | 223 | 9.79e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0457470 | AT2G29960.1 | 82.843 | 204 | 24 | 2 | 1 | 196 | 1 | 201 | 1.59e-118 | 334 |
| Msa0457470 | AT2G29960.3 | 82.843 | 204 | 24 | 2 | 1 | 196 | 1 | 201 | 1.59e-118 | 334 |
| Msa0457470 | AT5G58710.1 | 86.413 | 184 | 17 | 1 | 21 | 196 | 21 | 204 | 3.13e-114 | 324 |
| Msa0457470 | AT2G29960.2 | 79.412 | 204 | 21 | 3 | 1 | 196 | 1 | 191 | 4.14e-110 | 313 |
| Msa0457470 | AT3G55920.1 | 66.204 | 216 | 46 | 2 | 8 | 196 | 13 | 228 | 3.46e-94 | 274 |
| Msa0457470 | AT4G38740.1 | 65.269 | 167 | 50 | 1 | 36 | 194 | 5 | 171 | 3.76e-75 | 224 |
| Msa0457470 | AT2G21130.1 | 65.868 | 167 | 49 | 1 | 36 | 194 | 6 | 172 | 1.20e-74 | 223 |
| Msa0457470 | AT2G16600.1 | 65.269 | 167 | 50 | 1 | 36 | 194 | 6 | 172 | 4.51e-74 | 221 |
| Msa0457470 | AT3G56070.1 | 64.671 | 167 | 51 | 1 | 36 | 194 | 5 | 171 | 2.23e-73 | 219 |
| Msa0457470 | AT3G56070.2 | 64.671 | 167 | 51 | 1 | 36 | 194 | 5 | 171 | 2.23e-73 | 219 |
| Msa0457470 | AT4G34960.1 | 57.000 | 200 | 73 | 4 | 5 | 195 | 21 | 216 | 9.44e-72 | 217 |
| Msa0457470 | AT3G62030.3 | 59.783 | 184 | 68 | 3 | 19 | 196 | 74 | 257 | 3.39e-70 | 214 |
| Msa0457470 | AT3G62030.1 | 63.158 | 171 | 61 | 2 | 28 | 196 | 88 | 258 | 1.46e-69 | 213 |
| Msa0457470 | AT3G62030.2 | 63.158 | 171 | 61 | 2 | 28 | 196 | 141 | 311 | 5.08e-69 | 213 |
| Msa0457470 | AT5G13120.2 | 58.289 | 187 | 59 | 4 | 22 | 196 | 73 | 252 | 1.09e-68 | 210 |
| Msa0457470 | AT5G13120.1 | 58.289 | 187 | 59 | 4 | 22 | 196 | 77 | 256 | 1.35e-68 | 210 |
| Msa0457470 | AT4G34870.1 | 61.078 | 167 | 57 | 1 | 36 | 194 | 5 | 171 | 2.39e-66 | 201 |
| Msa0457470 | AT3G63400.2 | 59.302 | 172 | 61 | 2 | 31 | 193 | 3 | 174 | 1.89e-59 | 191 |
| Msa0457470 | AT2G15790.1 | 57.310 | 171 | 63 | 3 | 35 | 195 | 4 | 174 | 1.07e-57 | 186 |
| Msa0457470 | AT3G63400.3 | 59.302 | 172 | 61 | 2 | 31 | 193 | 3 | 174 | 1.48e-57 | 190 |
| Msa0457470 | AT3G63400.4 | 59.302 | 172 | 61 | 2 | 31 | 193 | 3 | 174 | 1.48e-57 | 190 |
| Msa0457470 | AT3G63400.1 | 59.302 | 172 | 61 | 2 | 31 | 193 | 3 | 174 | 1.48e-57 | 190 |
| Msa0457470 | AT2G16600.2 | 53.892 | 167 | 47 | 2 | 36 | 194 | 6 | 150 | 3.18e-52 | 165 |
| Msa0457470 | AT4G34960.2 | 55.484 | 155 | 57 | 3 | 5 | 151 | 21 | 171 | 3.64e-52 | 165 |
| Msa0457470 | AT2G38730.1 | 54.217 | 166 | 68 | 4 | 37 | 194 | 34 | 199 | 1.74e-51 | 164 |
| Msa0457470 | AT3G22920.1 | 48.538 | 171 | 68 | 6 | 36 | 194 | 5 | 167 | 6.54e-41 | 139 |
| Msa0457470 | AT4G32420.1 | 46.512 | 172 | 83 | 2 | 31 | 193 | 3 | 174 | 1.02e-37 | 138 |
| Msa0457470 | AT4G32420.5 | 46.512 | 172 | 83 | 2 | 31 | 193 | 3 | 174 | 1.02e-37 | 138 |
| Msa0457470 | AT4G32420.3 | 46.512 | 172 | 83 | 2 | 31 | 193 | 3 | 174 | 1.02e-37 | 138 |
| Msa0457470 | AT4G32420.6 | 46.512 | 172 | 83 | 2 | 31 | 193 | 3 | 174 | 1.02e-37 | 138 |
| Msa0457470 | AT4G32420.4 | 46.626 | 163 | 78 | 2 | 31 | 184 | 3 | 165 | 3.63e-35 | 131 |
| Msa0457470 | AT2G36130.1 | 59.794 | 97 | 37 | 2 | 77 | 172 | 45 | 140 | 1.04e-33 | 118 |
| Msa0457470 | AT3G44600.1 | 53.543 | 127 | 53 | 4 | 49 | 173 | 485 | 607 | 1.62e-32 | 123 |
| Msa0457470 | AT1G01940.1 | 48.062 | 129 | 61 | 4 | 47 | 173 | 8 | 132 | 1.10e-26 | 100 |
| Msa0457470 | AT5G67530.1 | 53.061 | 98 | 44 | 2 | 77 | 173 | 379 | 475 | 3.58e-24 | 99.4 |
| Msa0457470 | AT4G33060.1 | 47.959 | 98 | 46 | 4 | 77 | 172 | 48 | 142 | 5.49e-22 | 93.2 |
| Msa0457470 | AT1G53720.2 | 37.333 | 150 | 81 | 7 | 49 | 188 | 10 | 156 | 1.59e-16 | 76.6 |
| Msa0457470 | AT1G53720.1 | 37.333 | 150 | 81 | 7 | 49 | 188 | 10 | 156 | 4.38e-16 | 76.3 |
Find 65 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCTAATTGGTTGATTAAT+TGG | 0.109855 | 3_3:-52264927 | None:intergenic |
| GTTTGCGTGGTTTGGACTAA+TGG | 0.276869 | 3_3:-52264975 | None:intergenic |
| ACCTAATTGGTTGATTAATT+GGG | 0.345994 | 3_3:-52264926 | None:intergenic |
| TGAAAACCTGGATAAGAGAT+AGG | 0.350745 | 3_3:-52265168 | None:intergenic |
| AATTGTGAACCATTGGTATC+AGG | 0.357115 | 3_3:-52267875 | None:intergenic |
| TATCGAATTATTAGGGGAAA+AGG | 0.357432 | 3_3:+52267541 | Msa0457470:intron |
| GAGATTCTGTTTGCGTGGTT+TGG | 0.370854 | 3_3:-52264983 | None:intergenic |
| GAAAAGGGGACCGGTAAATC+TGG | 0.378050 | 3_3:+52267557 | Msa0457470:CDS |
| GCCCAATTAATCAACCAATT+AGG | 0.378657 | 3_3:+52264925 | Msa0457470:five_prime_UTR |
| CTCTTATCACTGTTCCTCTT+CGG | 0.383660 | 3_3:+52265142 | Msa0457470:CDS |
| GTTAACATGAAATTTGTAGA+AGG | 0.387295 | 3_3:+52269794 | Msa0457470:three_prime_UTR |
| AAGAGGCTTTCCAGATTTAC+CGG | 0.405654 | 3_3:-52267567 | None:intergenic |
| TTTGCGTGGTTTGGACTAAT+GGG | 0.418017 | 3_3:-52264974 | None:intergenic |
| CAGATTGATGGGAAGGATGC+AGG | 0.418145 | 3_3:+52265440 | Msa0457470:CDS |
| ATCGAATTATTAGGGGAAAA+GGG | 0.420476 | 3_3:+52267542 | Msa0457470:intron |
| AGCAATCACAACCTTGCTCT+TGG | 0.426225 | 3_3:-52269569 | None:intergenic |
| CGGAACCCTATCTCTTATCC+AGG | 0.430319 | 3_3:+52265162 | Msa0457470:CDS |
| TTTACACATGGCAATGGAAT+GGG | 0.433694 | 3_3:+52267650 | Msa0457470:CDS |
| TTCATTTCCATTGCACCTGC+AGG | 0.445253 | 3_3:+52269664 | Msa0457470:three_prime_UTR |
| TGGAAAGGTGCTTTCGGGAA+TGG | 0.451229 | 3_3:+52269501 | Msa0457470:CDS |
| TGCCCAGGTCGTATTGTAAT+AGG | 0.454334 | 3_3:+52266996 | Msa0457470:intron |
| TGAATTAATGCAGGCAAAGA+AGG | 0.458033 | 3_3:+52265370 | Msa0457470:intron |
| ATGGGCGGAGAATCAATTTA+CGG | 0.458516 | 3_3:+52267668 | Msa0457470:CDS |
| GAAGGCGAAAGAGGATTTGA+AGG | 0.459280 | 3_3:+52265388 | Msa0457470:CDS |
| GCAATCACAACCTTGCTCTT+GGG | 0.462284 | 3_3:-52269568 | None:intergenic |
| AAGCTAAAGCACACTGGTCC+AGG | 0.474279 | 3_3:+52267716 | Msa0457470:CDS |
| ACTCAACTGCCATGTTCACT+TGG | 0.496107 | 3_3:-52269821 | None:intergenic |
| AGTAAAATTATCTAAGAAGA+GGG | 0.497690 | 3_3:+52264890 | None:intergenic |
| CCTCCTTGGATCATAAAGCT+AGG | 0.503079 | 3_3:-52267623 | None:intergenic |
| ATGAGAGGATGCACTTATAG+AGG | 0.504255 | 3_3:-52269607 | None:intergenic |
| ATCCCTAGCTTTATGATCCA+AGG | 0.510185 | 3_3:+52267620 | Msa0457470:CDS |
| CTATGATCGATCTCAGTGTT+CGG | 0.514823 | 3_3:-52265071 | None:intergenic |
| TAAAGCTAGGGATAATCCTA+TGG | 0.516056 | 3_3:-52267610 | None:intergenic |
| GAGCTACCTTTGTAATGAAG+AGG | 0.529680 | 3_3:-52267584 | None:intergenic |
| GCAGGCAAAGAAGGCGAAAG+AGG | 0.535933 | 3_3:+52265379 | Msa0457470:intron |
| AAGTAGTCCTGCAGGTGCAA+TGG | 0.540665 | 3_3:-52269671 | None:intergenic |
| CTCCTTGGATCATAAAGCTA+GGG | 0.541065 | 3_3:-52267622 | None:intergenic |
| TCACAACTGTGACAACTAGC+TGG | 0.548760 | 3_3:+52267903 | Msa0457470:CDS |
| TGATGTTCAGATTGATGGGA+AGG | 0.552173 | 3_3:+52265433 | Msa0457470:CDS |
| AAGAAGAGGGTTTACGAACA+AGG | 0.553542 | 3_3:+52264903 | Msa0457470:five_prime_UTR |
| TATCTGTTCGATAGGTTGGA+TGG | 0.559737 | 3_3:+52269463 | Msa0457470:intron |
| ACAAAGGTAGCTCATTCCAT+AGG | 0.561949 | 3_3:+52267594 | Msa0457470:CDS |
| GAAAACCTGGATAAGAGATA+GGG | 0.566015 | 3_3:-52265167 | None:intergenic |
| CATGTGTAAAATCACCTCCT+TGG | 0.569371 | 3_3:-52267637 | None:intergenic |
| AAGTAAAATTATCTAAGAAG+AGG | 0.574708 | 3_3:+52264889 | None:intergenic |
| TGTTCGATAGGTTGGATGGA+AGG | 0.578646 | 3_3:+52269467 | Msa0457470:intron |
| GTTTACAAGATTGAAGCTGA+AGG | 0.584212 | 3_3:+52269529 | Msa0457470:CDS |
| TCGAATTATTAGGGGAAAAG+GGG | 0.585482 | 3_3:+52267543 | Msa0457470:intron |
| GAAGGAAATCCAAGTGAACA+TGG | 0.589562 | 3_3:+52269812 | Msa0457470:three_prime_UTR |
| TTATTAGGGGAAAAGGGGAC+CGG | 0.590285 | 3_3:+52267548 | Msa0457470:intron |
| TAACATCTTCAACATATCGT+TGG | 0.596291 | 3_3:-52269636 | None:intergenic |
| AGCGAAGCAAAACAAACCGA+TGG | 0.607720 | 3_3:+52265099 | Msa0457470:exon |
| AAGGTTGTGATTGCTGATAG+TGG | 0.613906 | 3_3:+52269577 | Msa0457470:CDS |
| AAGTGGCACTCCCAAGAGCA+AGG | 0.616632 | 3_3:+52269558 | Msa0457470:CDS |
| GGAAAGCCTCTTCATTACAA+AGG | 0.618832 | 3_3:+52267578 | Msa0457470:CDS |
| ATGCGTCAGTGTATGTATGT+AGG | 0.622192 | 3_3:-52265005 | None:intergenic |
| ACACATGGCAATGGAATGGG+CGG | 0.629266 | 3_3:+52267653 | Msa0457470:CDS |
| TTTGAAGGAAGTGACAAACA+AGG | 0.637543 | 3_3:+52265403 | Msa0457470:CDS |
| AACTTCAAGCTAAAGCACAC+TGG | 0.639521 | 3_3:+52267710 | Msa0457470:CDS |
| AATGCTGGTCCTGATACCAA+TGG | 0.652457 | 3_3:+52267866 | Msa0457470:CDS |
| TATCGTTGGTGAGATATGAG+AGG | 0.669658 | 3_3:-52269622 | None:intergenic |
| TGTAGGAGATTCTGTTTGCG+TGG | 0.671757 | 3_3:-52264988 | None:intergenic |
| GAAGCTGAAGGAAATCAAAG+TGG | 0.680132 | 3_3:+52269541 | Msa0457470:CDS |
| TAAGAGATAGGGTTCCGAAG+AGG | 0.697626 | 3_3:-52265156 | None:intergenic |
| CCTAGCTTTATGATCCAAGG+AGG | 0.704339 | 3_3:+52267623 | Msa0457470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCAAAAAAATTTTAGAAA+TGG | + | chr3_3:52265885-52265904 | Msa0457470:intron | 10.0% |
| !!! | TTTATTTTTTTTCATTTTGA+AGG | + | chr3_3:52266082-52266101 | Msa0457470:intron | 10.0% |
| !!! | CAAAAATATAATGATTTTAA+TGG | - | chr3_3:52266502-52266521 | None:intergenic | 10.0% |
| !! | TAAAATATAAATAAATCTTG+TGG | - | chr3_3:52266623-52266642 | None:intergenic | 10.0% |
| !! | TTTATTATAAAAAAATCTCA+TGG | - | chr3_3:52266665-52266684 | None:intergenic | 10.0% |
| !! | TTACAAATTGAAATATATTA+TGG | + | chr3_3:52267489-52267508 | Msa0457470:intron | 10.0% |
| !! | TTGTAATTATTCTAATATCA+CGG | + | chr3_3:52265221-52265240 | Msa0457470:intron | 15.0% |
| !!! | TTTTTTTATAAAAAGTCTTG+TGG | + | chr3_3:52265730-52265749 | Msa0457470:intron | 15.0% |
| !! | AATTTCTTTGTATCATTAAT+AGG | - | chr3_3:52266167-52266186 | None:intergenic | 15.0% |
| !! | TATTAAATGTTATTAGGAAA+TGG | - | chr3_3:52267426-52267445 | None:intergenic | 15.0% |
| !! | TCAGTATATTAAATGTTATT+AGG | - | chr3_3:52267432-52267451 | None:intergenic | 15.0% |
| !! | ATTATTAAAAACATTACCTT+TGG | - | chr3_3:52268715-52268734 | None:intergenic | 15.0% |
| !! | TCAAAAAAAGAAACTTTATT+TGG | - | chr3_3:52268739-52268758 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAAATTTTTT+TGG | - | chr3_3:52269146-52269165 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr3_3:52269249-52269268 | None:intergenic | 15.0% |
| !!! | AAGTATTAGTTTTACCTAAT+TGG | - | chr3_3:52264942-52264961 | None:intergenic | 20.0% |
| !! | ATAAAGAAAAAATGAAAACC+TGG | - | chr3_3:52265183-52265202 | None:intergenic | 20.0% |
| !! | TATGAATTTGTAATTGTGTT+TGG | + | chr3_3:52265304-52265323 | Msa0457470:intron | 20.0% |
| !!! | TTAAGATCATTATTTTGTGT+TGG | + | chr3_3:52265502-52265521 | Msa0457470:intron | 20.0% |
| !! | ATTTGTAATTTGGATTTCAA+AGG | + | chr3_3:52265810-52265829 | Msa0457470:intron | 20.0% |
| !! | AAGGATTATATCATAAGATT+TGG | + | chr3_3:52265829-52265848 | Msa0457470:intron | 20.0% |
| !! | ATTATATCATAAGATTTGGA+AGG | + | chr3_3:52265833-52265852 | Msa0457470:intron | 20.0% |
| !! | TAAATATCAATTTCCAGTAT+TGG | - | chr3_3:52265982-52266001 | None:intergenic | 20.0% |
| !! | TAAATATCAATTTCCAGTAT+TGG | - | chr3_3:52265982-52266001 | None:intergenic | 20.0% |
| !! | AAAAGTAAAGAAACAAATCT+TGG | + | chr3_3:52266340-52266359 | Msa0457470:intron | 20.0% |
| !!! | TAATGGATTCTTTTGTATAA+TGG | - | chr3_3:52266485-52266504 | None:intergenic | 20.0% |
| !! | ACAACTTAAAAAATGTCTAT+TGG | - | chr3_3:52266529-52266548 | None:intergenic | 20.0% |
| !!! | GAATCAAGACTTTTTATTAA+AGG | - | chr3_3:52266587-52266606 | None:intergenic | 20.0% |
| !! | TAGCTGATAACAAATTTATT+GGG | - | chr3_3:52266770-52266789 | None:intergenic | 20.0% |
| !! | TTAGCTGATAACAAATTTAT+TGG | - | chr3_3:52266771-52266790 | None:intergenic | 20.0% |
| !!! | AAACTATTTTGGTATGTAAT+GGG | + | chr3_3:52266951-52266970 | Msa0457470:intron | 20.0% |
| !! | TTCATTTGTATCGAATTATT+AGG | + | chr3_3:52267533-52267552 | Msa0457470:intron | 20.0% |
| !! | TCATTTGTATCGAATTATTA+GGG | + | chr3_3:52267534-52267553 | Msa0457470:intron | 20.0% |
| !! | AAAAGAAATCATGATAACAT+TGG | - | chr3_3:52268128-52268147 | None:intergenic | 20.0% |
| !!! | TCATAGATTTTGATCAATTA+CGG | - | chr3_3:52268485-52268504 | None:intergenic | 20.0% |
| !! | ATAATCTGAGAAAAAAAATG+TGG | + | chr3_3:52268506-52268525 | Msa0457470:intron | 20.0% |
| !!! | GTTTCTTTTTTTGAAATATC+AGG | + | chr3_3:52268745-52268764 | Msa0457470:intron | 20.0% |
| !! | TTCTTCTCTAATAAAAAATG+AGG | - | chr3_3:52268916-52268935 | None:intergenic | 20.0% |
| !! | AAATTATCCTTGTTAACTAT+TGG | - | chr3_3:52269273-52269292 | None:intergenic | 20.0% |
| !! | AATAGTTAACAAGGATAATT+TGG | + | chr3_3:52269272-52269291 | Msa0457470:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | - | chr3_3:52269306-52269325 | None:intergenic | 20.0% |
| ! | ACCTAATTGGTTGATTAATT+GGG | - | chr3_3:52264929-52264948 | None:intergenic | 25.0% |
| ! | TACCTAATTGGTTGATTAAT+TGG | - | chr3_3:52264930-52264949 | None:intergenic | 25.0% |
| !! | AATTTTGTGTGAATTAATGC+AGG | + | chr3_3:52265361-52265380 | Msa0457470:intron | 25.0% |
| !!! | TATTTTGATGTTCAGATTGA+TGG | + | chr3_3:52265428-52265447 | Msa0457470:CDS | 25.0% |
| !!! | ATTTTGATGTTCAGATTGAT+GGG | + | chr3_3:52265429-52265448 | Msa0457470:CDS | 25.0% |
| ! | ACAATCATAAACTATATTGG+CGG | - | chr3_3:52265572-52265591 | None:intergenic | 25.0% |
| ! | GACACAATCATAAACTATAT+TGG | - | chr3_3:52265575-52265594 | None:intergenic | 25.0% |
| !! | TTCTCTTTAGTTAGTCATTT+TGG | + | chr3_3:52265619-52265638 | Msa0457470:intron | 25.0% |
| !!! | TGTTATTTCGTTAGTCAATT+TGG | + | chr3_3:52265647-52265666 | Msa0457470:intron | 25.0% |
| ! | GACTATCAAGATTTGTAATT+TGG | + | chr3_3:52265800-52265819 | Msa0457470:intron | 25.0% |
| !! | ATGGATTCATGAGATTTTAT+AGG | + | chr3_3:52265862-52265881 | Msa0457470:intron | 25.0% |
| !! | AAGGTTGTAAAATTTTGTAG+AGG | + | chr3_3:52266101-52266120 | Msa0457470:intron | 25.0% |
| ! | AATAGCACAATAGAGAAAAA+TGG | + | chr3_3:52266233-52266252 | Msa0457470:intron | 25.0% |
| !!! | TAGACATTTTTTAAGTTGTG+AGG | + | chr3_3:52266530-52266549 | Msa0457470:intron | 25.0% |
| ! | TTATTAAAGGCAACGAAATT+CGG | - | chr3_3:52266574-52266593 | None:intergenic | 25.0% |
| ! | AAATAGTTTGAATTCTCAGT+TGG | - | chr3_3:52266940-52266959 | None:intergenic | 25.0% |
| !! | ACTGAGAATTCAAACTATTT+TGG | + | chr3_3:52266940-52266959 | Msa0457470:intron | 25.0% |
| !!! | CAAACTATTTTGGTATGTAA+TGG | + | chr3_3:52266950-52266969 | Msa0457470:intron | 25.0% |
| !! | GTATTGTAATAGGTCTTTTT+GGG | + | chr3_3:52267006-52267025 | Msa0457470:CDS | 25.0% |
| ! | TCAAAATCTCTGTATATTGT+TGG | + | chr3_3:52267060-52267079 | Msa0457470:intron | 25.0% |
| ! | AACACATATTTAAGTCTATC+AGG | + | chr3_3:52267345-52267364 | Msa0457470:intron | 25.0% |
| ! | AGTGAAAAGAAGCAAAATAA+CGG | - | chr3_3:52267382-52267401 | None:intergenic | 25.0% |
| ! | CATTTGTATCGAATTATTAG+GGG | + | chr3_3:52267535-52267554 | Msa0457470:intron | 25.0% |
| !! | ATCAACAGGATTTTTATCAA+TGG | + | chr3_3:52267841-52267860 | Msa0457470:intron | 25.0% |
| !! | ATTTGAACATGTGTTTTCTT+TGG | - | chr3_3:52267966-52267985 | None:intergenic | 25.0% |
| ! | GCTTTAGTAAAATGGAAAAA+AGG | - | chr3_3:52268011-52268030 | None:intergenic | 25.0% |
| ! | CAGAATATGCTTTAGTAAAA+TGG | - | chr3_3:52268019-52268038 | None:intergenic | 25.0% |
| ! | ATATTCTGATAGATGTTGAT+AGG | + | chr3_3:52268031-52268050 | Msa0457470:intron | 25.0% |
| ! | ATAGGAGTAGATAACTAATT+AGG | + | chr3_3:52268049-52268068 | Msa0457470:intron | 25.0% |
| !! | AATTGTGGAAAAGTTTTCAT+TGG | - | chr3_3:52268217-52268236 | None:intergenic | 25.0% |
| ! | AAAAGGAAGAAGTCAATAAA+AGG | + | chr3_3:52268254-52268273 | Msa0457470:intron | 25.0% |
| ! | AAAGGAAGAAGTCAATAAAA+GGG | + | chr3_3:52268255-52268274 | Msa0457470:intron | 25.0% |
| ! | TGATACATATGGTTTAAAAG+AGG | - | chr3_3:52268639-52268658 | None:intergenic | 25.0% |
| !! | TAAAAACATTACCTTTGGAA+CGG | - | chr3_3:52268710-52268729 | None:intergenic | 25.0% |
| ! | ATCTTGTTGGTATTATTTGA+TGG | + | chr3_3:52268881-52268900 | Msa0457470:intron | 25.0% |
| ! | TCTTGTTGGTATTATTTGAT+GGG | + | chr3_3:52268882-52268901 | Msa0457470:intron | 25.0% |
| !! | ATACTGGTTAAAGAAAATAC+AGG | - | chr3_3:52269030-52269049 | None:intergenic | 25.0% |
| ! | TAAAGAAAATACATGCATAC+TGG | - | chr3_3:52269046-52269065 | None:intergenic | 25.0% |
| !! | TGTATTTTCTTTAACCAGTA+TGG | + | chr3_3:52269029-52269048 | Msa0457470:intron | 25.0% |
| ! | AAACTAACCAATAGTTAACA+AGG | + | chr3_3:52269263-52269282 | Msa0457470:intron | 25.0% |
| ! | AATGTATATATCTGTTCGAT+AGG | + | chr3_3:52269455-52269474 | Msa0457470:intron | 25.0% |
| ! | GTTCAAGATTAGAGAAAAAA+TGG | + | chr3_3:52269766-52269785 | Msa0457470:three_prime_UTR | 25.0% |
| ! | GTTAACATGAAATTTGTAGA+AGG | + | chr3_3:52269794-52269813 | Msa0457470:three_prime_UTR | 25.0% |
| ! | TTTAACCTCAATGGTCATTT+TGG | + | chr3_3:52265527-52265546 | Msa0457470:intron | 30.0% |
| TGCAAACAAAAGAGACATTT+AGG | + | chr3_3:52265675-52265694 | Msa0457470:intron | 30.0% | |
| GCAAACAAAAGAGACATTTA+GGG | + | chr3_3:52265676-52265695 | Msa0457470:intron | 30.0% | |
| CAAACAAAAGAGACATTTAG+GGG | + | chr3_3:52265677-52265696 | Msa0457470:intron | 30.0% | |
| AAACAAAAGAGACATTTAGG+GGG | + | chr3_3:52265678-52265697 | Msa0457470:intron | 30.0% | |
| ! | AAGATTTGGAAGGACTTTTA+TGG | + | chr3_3:52265843-52265862 | Msa0457470:intron | 30.0% |
| AATGCAATTGAGAAGATATG+TGG | - | chr3_3:52265951-52265970 | None:intergenic | 30.0% | |
| AATGCAATTGAGAAGATATG+TGG | - | chr3_3:52265951-52265970 | None:intergenic | 30.0% | |
| ! | AGAAAGTATGAAAAGTCTCA+AGG | + | chr3_3:52266396-52266415 | Msa0457470:intron | 30.0% |
| CCATTGAATTGAGATTTCAA+AGG | - | chr3_3:52266703-52266722 | None:intergenic | 30.0% | |
| !! | CCTTTGAAATCTCAATTCAA+TGG | + | chr3_3:52266700-52266719 | Msa0457470:intron | 30.0% |
| ! | TGAAAAGTGTGCGTTTATAT+AGG | + | chr3_3:52266793-52266812 | Msa0457470:intron | 30.0% |
| ! | TAGGCTAGTTCTTCTAATTA+AGG | + | chr3_3:52266812-52266831 | Msa0457470:intron | 30.0% |
| GAGTTAGTAATGTGAAATGA+GGG | + | chr3_3:52266899-52266918 | Msa0457470:intron | 30.0% | |
| ! | CGTATTGTAATAGGTCTTTT+TGG | + | chr3_3:52267005-52267024 | Msa0457470:CDS | 30.0% |
| ACATATTTAAGTCTATCAGG+TGG | + | chr3_3:52267348-52267367 | Msa0457470:intron | 30.0% | |
| TAGGAAATGGATGAAATGTT+AGG | - | chr3_3:52267413-52267432 | None:intergenic | 30.0% | |
| TATCGAATTATTAGGGGAAA+AGG | + | chr3_3:52267541-52267560 | Msa0457470:intron | 30.0% | |
| ATCGAATTATTAGGGGAAAA+GGG | + | chr3_3:52267542-52267561 | Msa0457470:intron | 30.0% | |
| AAGTTCAAATGAATCTCTGA+TGG | + | chr3_3:52267784-52267803 | Msa0457470:intron | 30.0% | |
| AGTTCAAATGAATCTCTGAT+GGG | + | chr3_3:52267785-52267804 | Msa0457470:intron | 30.0% | |
| !!! | TTGTCATTTTCTGTATCAAC+AGG | + | chr3_3:52267827-52267846 | Msa0457470:intron | 30.0% |
| ! | TTTTTATCAATGGCAAATGC+TGG | + | chr3_3:52267851-52267870 | Msa0457470:CDS | 30.0% |
| GATGAAAAATTGTGAACCAT+TGG | - | chr3_3:52267885-52267904 | None:intergenic | 30.0% | |
| TTCTCTTTATATAGCAATGC+TGG | - | chr3_3:52268157-52268176 | None:intergenic | 30.0% | |
| ! | GAAAACTTTTCCACAATTCA+TGG | + | chr3_3:52268219-52268238 | Msa0457470:intron | 30.0% |
| ! | AATTGACTTACCATGAATTG+TGG | - | chr3_3:52268232-52268251 | None:intergenic | 30.0% |
| ACAATTCATGGTAAGTCAAT+TGG | + | chr3_3:52268231-52268250 | Msa0457470:intron | 30.0% | |
| AAGGAAGAAGTCAATAAAAG+GGG | + | chr3_3:52268256-52268275 | Msa0457470:intron | 30.0% | |
| GAGAATAAAATAGAAGACGA+AGG | + | chr3_3:52268370-52268389 | Msa0457470:intron | 30.0% | |
| TACGGAAACATGTAAAATGT+TGG | - | chr3_3:52268467-52268486 | None:intergenic | 30.0% | |
| TGCACCACTTATTATAAAAG+AGG | - | chr3_3:52268549-52268568 | None:intergenic | 30.0% | |
| AACCATATGTATCACGTAAT+CGG | + | chr3_3:52268645-52268664 | Msa0457470:intron | 30.0% | |
| !! | AAAAACATTACCTTTGGAAC+GGG | - | chr3_3:52268709-52268728 | None:intergenic | 30.0% |
| !!! | TTTTGAAATATCAGGTGCAT+TGG | + | chr3_3:52268753-52268772 | Msa0457470:intron | 30.0% |
| TTGTTCAGTCTCATATTTAC+CGG | + | chr3_3:52268815-52268834 | Msa0457470:intron | 30.0% | |
| ATCCATGATCATAATCTTGT+TGG | + | chr3_3:52268868-52268887 | Msa0457470:intron | 30.0% | |
| TACCAACAAGATTATGATCA+TGG | - | chr3_3:52268873-52268892 | None:intergenic | 30.0% | |
| TGTATGTCATGTCATGATTA+TGG | - | chr3_3:52268993-52269012 | None:intergenic | 30.0% | |
| !! | AAGCGAAACTCATTTTGAAA+CGG | - | chr3_3:52269120-52269139 | None:intergenic | 30.0% |
| !!! | TTCATAATGAGTGTCGTTTT+AGG | - | chr3_3:52269354-52269373 | None:intergenic | 30.0% |
| AAACGACACTCATTATGAAA+TGG | + | chr3_3:52269355-52269374 | Msa0457470:intron | 30.0% | |
| TATATATCTGTTCGATAGGT+TGG | + | chr3_3:52269459-52269478 | Msa0457470:intron | 30.0% | |
| TAACATCTTCAACATATCGT+TGG | - | chr3_3:52269639-52269658 | None:intergenic | 30.0% | |
| TAAAAAATAAGTAGTCCTGC+AGG | - | chr3_3:52269682-52269701 | None:intergenic | 30.0% | |
| GCCCAATTAATCAACCAATT+AGG | + | chr3_3:52264925-52264944 | Msa0457470:five_prime_UTR | 35.0% | |
| GAAAACCTGGATAAGAGATA+GGG | - | chr3_3:52265170-52265189 | None:intergenic | 35.0% | |
| TGAAAACCTGGATAAGAGAT+AGG | - | chr3_3:52265171-52265190 | None:intergenic | 35.0% | |
| TGAATTAATGCAGGCAAAGA+AGG | + | chr3_3:52265370-52265389 | Msa0457470:intron | 35.0% | |
| TTTGAAGGAAGTGACAAACA+AGG | + | chr3_3:52265403-52265422 | Msa0457470:CDS | 35.0% | |
| !! | GTGTTGGATTTTAACCTCAA+TGG | + | chr3_3:52265518-52265537 | Msa0457470:intron | 35.0% |
| ACTAACTAAAGAGAAACTCG+AGG | - | chr3_3:52265614-52265633 | None:intergenic | 35.0% | |
| AACAAAAGAGACATTTAGGG+GGG | + | chr3_3:52265679-52265698 | Msa0457470:intron | 35.0% | |
| !! | GCATTCTTTAAGACCAATAC+TGG | + | chr3_3:52265966-52265985 | Msa0457470:intron | 35.0% |
| !! | GCATTCTTTAAGACCAATAC+TGG | + | chr3_3:52265966-52265985 | Msa0457470:intron | 35.0% |
| CGAGTTAGTAATGTGAAATG+AGG | + | chr3_3:52266898-52266917 | Msa0457470:intron | 35.0% | |
| !! | GATTTTGAAAACCTTACCTG+CGG | - | chr3_3:52267048-52267067 | None:intergenic | 35.0% |
| ! | CAAAAGGGTACATCAAAACA+AGG | - | chr3_3:52267118-52267137 | None:intergenic | 35.0% |
| TCGAATTATTAGGGGAAAAG+GGG | + | chr3_3:52267543-52267562 | Msa0457470:intron | 35.0% | |
| TAAAGCTAGGGATAATCCTA+TGG | - | chr3_3:52267613-52267632 | None:intergenic | 35.0% | |
| ! | TTTTACACATGGCAATGGAA+TGG | + | chr3_3:52267649-52267668 | Msa0457470:CDS | 35.0% |
| TTTACACATGGCAATGGAAT+GGG | + | chr3_3:52267650-52267669 | Msa0457470:CDS | 35.0% | |
| AGACAGATAGAACATTTACC+TGG | - | chr3_3:52267737-52267756 | None:intergenic | 35.0% | |
| GTTCAAATGAATCTCTGATG+GGG | + | chr3_3:52267786-52267805 | Msa0457470:intron | 35.0% | |
| AATTGTGAACCATTGGTATC+AGG | - | chr3_3:52267878-52267897 | None:intergenic | 35.0% | |
| ! | GAGAGCATAGCGAATTAAAA+AGG | + | chr3_3:52268189-52268208 | Msa0457470:intron | 35.0% |
| CATGGTAAGTCAATTGGAAA+AGG | + | chr3_3:52268237-52268256 | Msa0457470:intron | 35.0% | |
| TGAGAAAAAAAATGTGGCGT+AGG | + | chr3_3:52268512-52268531 | Msa0457470:intron | 35.0% | |
| ! | GAGGCCTCTTTTATAATAAG+TGG | + | chr3_3:52268542-52268561 | Msa0457470:intron | 35.0% |
| GTGTGATATAAGTGAGAAAG+AGG | + | chr3_3:52268613-52268632 | Msa0457470:intron | 35.0% | |
| ACCATATGTATCACGTAATC+GGG | + | chr3_3:52268646-52268665 | Msa0457470:intron | 35.0% | |
| AATTATAACACCCGTTCCAA+AGG | + | chr3_3:52268696-52268715 | Msa0457470:intron | 35.0% | |
| GCGTTAACAAATTTGAGTCA+GGG | - | chr3_3:52268783-52268802 | None:intergenic | 35.0% | |
| TGCGTTAACAAATTTGAGTC+AGG | - | chr3_3:52268784-52268803 | None:intergenic | 35.0% | |
| AGTCTCATATTTACCGGAAA+GGG | + | chr3_3:52268821-52268840 | Msa0457470:intron | 35.0% | |
| !!! | GAAACTCATTTTGAAACGGA+GGG | - | chr3_3:52269116-52269135 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr3_3:52269220-52269239 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr3_3:52269224-52269243 | None:intergenic | 35.0% |
| GACACTCATTATGAAATGGT+GGG | + | chr3_3:52269359-52269378 | Msa0457470:intron | 35.0% | |
| !!! | AAGGCATGTTGTTTTTGGAA+AGG | + | chr3_3:52269486-52269505 | Msa0457470:CDS | 35.0% |
| !!! | TGTTTTTGGAAAGGTGCTTT+CGG | + | chr3_3:52269495-52269514 | Msa0457470:CDS | 35.0% |
| GTTTACAAGATTGAAGCTGA+AGG | + | chr3_3:52269529-52269548 | Msa0457470:CDS | 35.0% | |
| TGTTGAAGCAGTATCAATGT+TGG | - | chr3_3:52269883-52269902 | None:intergenic | 35.0% | |
| !! | TGTATCTTTGCTGTGTTTTG+TGG | + | chr3_3:52269916-52269935 | Msa0457470:three_prime_UTR | 35.0% |
| AAGAAGAGGGTTTACGAACA+AGG | + | chr3_3:52264903-52264922 | Msa0457470:five_prime_UTR | 40.0% | |
| ! | TTTGCGTGGTTTGGACTAAT+GGG | - | chr3_3:52264977-52264996 | None:intergenic | 40.0% |
| ATGCGTCAGTGTATGTATGT+AGG | - | chr3_3:52265008-52265027 | None:intergenic | 40.0% | |
| CTATGATCGATCTCAGTGTT+CGG | - | chr3_3:52265074-52265093 | None:intergenic | 40.0% | |
| CTCTTATCACTGTTCCTCTT+CGG | + | chr3_3:52265142-52265161 | Msa0457470:CDS | 40.0% | |
| TGATGTTCAGATTGATGGGA+AGG | + | chr3_3:52265433-52265452 | Msa0457470:CDS | 40.0% | |
| AGAGACCAAAATGACCATTG+AGG | - | chr3_3:52265535-52265554 | None:intergenic | 40.0% | |
| CTTGGCAATCAATTGTCTGA+AGG | + | chr3_3:52266358-52266377 | Msa0457470:intron | 40.0% | |
| TTAAAGGCAACGAAATTCGG+TGG | - | chr3_3:52266571-52266590 | None:intergenic | 40.0% | |
| GACCTATTACAATACGACCT+GGG | - | chr3_3:52267001-52267020 | None:intergenic | 40.0% | |
| AGACCTATTACAATACGACC+TGG | - | chr3_3:52267002-52267021 | None:intergenic | 40.0% | |
| ! | AAAACCTTACCTGCGGTTTT+TGG | - | chr3_3:52267041-52267060 | None:intergenic | 40.0% |
| ! | CTCGGAAGTTTTCTGCAAAA+GGG | - | chr3_3:52267133-52267152 | None:intergenic | 40.0% |
| AAGAACCGATGACTATCAGT+TGG | + | chr3_3:52267294-52267313 | Msa0457470:intron | 40.0% | |
| ACAAGCCAACTGATAGTCAT+CGG | - | chr3_3:52267302-52267321 | None:intergenic | 40.0% | |
| !! | ACTATCAGTTGGCTTGTAAC+TGG | + | chr3_3:52267305-52267324 | Msa0457470:intron | 40.0% |
| TATCACTGTCTGAGCTTATG+AGG | + | chr3_3:52267452-52267471 | Msa0457470:intron | 40.0% | |
| AAGAGGCTTTCCAGATTTAC+CGG | - | chr3_3:52267570-52267589 | None:intergenic | 40.0% | |
| GGAAAGCCTCTTCATTACAA+AGG | + | chr3_3:52267578-52267597 | Msa0457470:CDS | 40.0% | |
| GAGCTACCTTTGTAATGAAG+AGG | - | chr3_3:52267587-52267606 | None:intergenic | 40.0% | |
| ACAAAGGTAGCTCATTCCAT+AGG | + | chr3_3:52267594-52267613 | Msa0457470:CDS | 40.0% | |
| !! | ATCCCTAGCTTTATGATCCA+AGG | + | chr3_3:52267620-52267639 | Msa0457470:CDS | 40.0% |
| CTCCTTGGATCATAAAGCTA+GGG | - | chr3_3:52267625-52267644 | None:intergenic | 40.0% | |
| CATGTGTAAAATCACCTCCT+TGG | - | chr3_3:52267640-52267659 | None:intergenic | 40.0% | |
| ! | CAAGGAGGTGATTTTACACA+TGG | + | chr3_3:52267638-52267657 | Msa0457470:CDS | 40.0% |
| ! | GGTGATTTTACACATGGCAA+TGG | + | chr3_3:52267644-52267663 | Msa0457470:CDS | 40.0% |
| ATGGGCGGAGAATCAATTTA+CGG | + | chr3_3:52267668-52267687 | Msa0457470:CDS | 40.0% | |
| AACTTCAAGCTAAAGCACAC+TGG | + | chr3_3:52267710-52267729 | Msa0457470:CDS | 40.0% | |
| AAGAAGTCAATAAAAGGGGC+TGG | + | chr3_3:52268260-52268279 | Msa0457470:intron | 40.0% | |
| AGAAGTCAATAAAAGGGGCT+GGG | + | chr3_3:52268261-52268280 | Msa0457470:intron | 40.0% | |
| AGTGGTGCAAGATGATATTG+CGG | + | chr3_3:52268560-52268579 | Msa0457470:intron | 40.0% | |
| CTTATATCACACGTTGTCGT+AGG | - | chr3_3:52268605-52268624 | None:intergenic | 40.0% | |
| TCCCGATTACGTGATACATA+TGG | - | chr3_3:52268650-52268669 | None:intergenic | 40.0% | |
| TCACGTAATCGGGAACAAAA+TGG | + | chr3_3:52268656-52268675 | Msa0457470:intron | 40.0% | |
| ATCGGGAACAAAATGGCAAA+AGG | + | chr3_3:52268663-52268682 | Msa0457470:intron | 40.0% | |
| CAGTCTCATATTTACCGGAA+AGG | + | chr3_3:52268820-52268839 | Msa0457470:intron | 40.0% | |
| TTGCACAACTATTCCCTTTC+CGG | - | chr3_3:52268837-52268856 | None:intergenic | 40.0% | |
| AATGATTCGCATCTCCATAC+TGG | - | chr3_3:52269070-52269089 | None:intergenic | 40.0% | |
| !!! | CGAAACTCATTTTGAAACGG+AGG | - | chr3_3:52269117-52269136 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr3_3:52269221-52269240 | None:intergenic | 40.0% |
| CGACACTCATTATGAAATGG+TGG | + | chr3_3:52269358-52269377 | Msa0457470:intron | 40.0% | |
| ! | TATCTGTTCGATAGGTTGGA+TGG | + | chr3_3:52269463-52269482 | Msa0457470:intron | 40.0% |
| !!! | GATGGAAGGCATGTTGTTTT+TGG | + | chr3_3:52269481-52269500 | Msa0457470:CDS | 40.0% |
| !!! | GTTTTTGGAAAGGTGCTTTC+GGG | + | chr3_3:52269496-52269515 | Msa0457470:CDS | 40.0% |
| GAAGCTGAAGGAAATCAAAG+TGG | + | chr3_3:52269541-52269560 | Msa0457470:CDS | 40.0% | |
| AAGGTTGTGATTGCTGATAG+TGG | + | chr3_3:52269577-52269596 | Msa0457470:CDS | 40.0% | |
| ATGAGAGGATGCACTTATAG+AGG | - | chr3_3:52269610-52269629 | None:intergenic | 40.0% | |
| ! | TATCGTTGGTGAGATATGAG+AGG | - | chr3_3:52269625-52269644 | None:intergenic | 40.0% |
| GAAGGAAATCCAAGTGAACA+TGG | + | chr3_3:52269812-52269831 | Msa0457470:three_prime_UTR | 40.0% | |
| ! | GTTTGCGTGGTTTGGACTAA+TGG | - | chr3_3:52264978-52264997 | None:intergenic | 45.0% |
| GAGATTCTGTTTGCGTGGTT+TGG | - | chr3_3:52264986-52265005 | None:intergenic | 45.0% | |
| TGTAGGAGATTCTGTTTGCG+TGG | - | chr3_3:52264991-52265010 | None:intergenic | 45.0% | |
| AGCGAAGCAAAACAAACCGA+TGG | + | chr3_3:52265099-52265118 | Msa0457470:exon | 45.0% | |
| !!! | AACGACGTCGTTTTTGCCAT+CGG | - | chr3_3:52265118-52265137 | None:intergenic | 45.0% |
| TAAGAGATAGGGTTCCGAAG+AGG | - | chr3_3:52265159-52265178 | None:intergenic | 45.0% | |
| GAAGGCGAAAGAGGATTTGA+AGG | + | chr3_3:52265388-52265407 | Msa0457470:CDS | 45.0% | |
| ! | AGACATTTAGGGGGGTGTAT+TGG | + | chr3_3:52265687-52265706 | Msa0457470:intron | 45.0% |
| ! | TTAGGGGGGTGTATTGGATT+AGG | + | chr3_3:52265693-52265712 | Msa0457470:intron | 45.0% |
| TGCCCAGGTCGTATTGTAAT+AGG | + | chr3_3:52266996-52267015 | Msa0457470:intron | 45.0% | |
| AAGACAGTTCCAAAAACCGC+AGG | + | chr3_3:52267029-52267048 | Msa0457470:CDS | 45.0% | |
| AGTTCCAAAAACCGCAGGTA+AGG | + | chr3_3:52267034-52267053 | Msa0457470:intron | 45.0% | |
| ! | GCTCGGAAGTTTTCTGCAAA+AGG | - | chr3_3:52267134-52267153 | None:intergenic | 45.0% |
| !! | CAGTTGGCTTGTAACTGGAT+AGG | + | chr3_3:52267310-52267329 | Msa0457470:intron | 45.0% |
| TTATTAGGGGAAAAGGGGAC+CGG | + | chr3_3:52267548-52267567 | Msa0457470:intron | 45.0% | |
| CCTCCTTGGATCATAAAGCT+AGG | - | chr3_3:52267626-52267645 | None:intergenic | 45.0% | |
| !! | CCTAGCTTTATGATCCAAGG+AGG | + | chr3_3:52267623-52267642 | Msa0457470:CDS | 45.0% |
| AATGCTGGTCCTGATACCAA+TGG | + | chr3_3:52267866-52267885 | Msa0457470:CDS | 45.0% | |
| TCACAACTGTGACAACTAGC+TGG | + | chr3_3:52267903-52267922 | Msa0457470:CDS | 45.0% | |
| ACTGCATGCAGTGGACATAT+AGG | - | chr3_3:52268076-52268095 | None:intergenic | 45.0% | |
| AATTCGCTATGCTCTCGTGA+TGG | - | chr3_3:52268185-52268204 | None:intergenic | 45.0% | |
| ! | TGTTCGATAGGTTGGATGGA+AGG | + | chr3_3:52269467-52269486 | Msa0457470:intron | 45.0% |
| GCAATCACAACCTTGCTCTT+GGG | - | chr3_3:52269571-52269590 | None:intergenic | 45.0% | |
| AGCAATCACAACCTTGCTCT+TGG | - | chr3_3:52269572-52269591 | None:intergenic | 45.0% | |
| TTCATTTCCATTGCACCTGC+AGG | + | chr3_3:52269664-52269683 | Msa0457470:three_prime_UTR | 45.0% | |
| ACTCAACTGCCATGTTCACT+TGG | - | chr3_3:52269824-52269843 | None:intergenic | 45.0% | |
| CGGAACCCTATCTCTTATCC+AGG | + | chr3_3:52265162-52265181 | Msa0457470:CDS | 50.0% | |
| CAGATTGATGGGAAGGATGC+AGG | + | chr3_3:52265440-52265459 | Msa0457470:CDS | 50.0% | |
| CGAAAAATAGCAGCAGCTCG+TGG | + | chr3_3:52266315-52266334 | Msa0457470:intron | 50.0% | |
| GTTGTGATTCTTGTCTGCCC+AGG | + | chr3_3:52266981-52267000 | Msa0457470:intron | 50.0% | |
| AACTTCCGAGCTCTTTGCAC+AGG | + | chr3_3:52267143-52267162 | Msa0457470:intron | 50.0% | |
| GAAAAGGGGACCGGTAAATC+TGG | + | chr3_3:52267557-52267576 | Msa0457470:CDS | 50.0% | |
| ACACATGGCAATGGAATGGG+CGG | + | chr3_3:52267653-52267672 | Msa0457470:CDS | 50.0% | |
| AAGCTAAAGCACACTGGTCC+AGG | + | chr3_3:52267716-52267735 | Msa0457470:CDS | 50.0% | |
| TGCGTCAAAACTGCATGCAG+TGG | - | chr3_3:52268085-52268104 | None:intergenic | 50.0% | |
| AGTCAATAAAAGGGGCTGGG+TGG | + | chr3_3:52268264-52268283 | Msa0457470:intron | 50.0% | |
| ATGTGGCGTAGGTGAGAAAG+AGG | + | chr3_3:52268523-52268542 | Msa0457470:intron | 50.0% | |
| !! | TGGAAAGGTGCTTTCGGGAA+TGG | + | chr3_3:52269501-52269520 | Msa0457470:CDS | 50.0% |
| AAGTAGTCCTGCAGGTGCAA+TGG | - | chr3_3:52269674-52269693 | None:intergenic | 50.0% | |
| GCAGGCAAAGAAGGCGAAAG+AGG | + | chr3_3:52265379-52265398 | Msa0457470:intron | 55.0% | |
| GCTCACCTGTGCAAAGAGCT+CGG | - | chr3_3:52267151-52267170 | None:intergenic | 55.0% | |
| AAGTGGCACTCCCAAGAGCA+AGG | + | chr3_3:52269558-52269577 | Msa0457470:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 52264894 | 52270006 | 52264894 | ID=Msa0457470;Name=Msa0457470 |
| chr3_3 | mRNA | 52264894 | 52270006 | 52264894 | ID=Msa0457470-mRNA-1;Parent=Msa0457470;Name=Msa0457470-mRNA-1;_AED=0.11;_eAED=0.11;_QI=224|0.83|1|1|0.83|0.71|7|364|196 |
| chr3_3 | exon | 52264894 | 52265183 | 52264894 | ID=Msa0457470-mRNA-1:exon:10028;Parent=Msa0457470-mRNA-1 |
| chr3_3 | exon | 52265383 | 52265461 | 52265383 | ID=Msa0457470-mRNA-1:exon:10029;Parent=Msa0457470-mRNA-1 |
| chr3_3 | exon | 52267003 | 52267050 | 52267003 | ID=Msa0457470-mRNA-1:exon:10030;Parent=Msa0457470-mRNA-1 |
| chr3_3 | exon | 52267555 | 52267737 | 52267555 | ID=Msa0457470-mRNA-1:exon:10031;Parent=Msa0457470-mRNA-1 |
| chr3_3 | exon | 52267849 | 52267924 | 52267849 | ID=Msa0457470-mRNA-1:exon:10032;Parent=Msa0457470-mRNA-1 |
| chr3_3 | exon | 52269477 | 52269874 | 52269477 | ID=Msa0457470-mRNA-1:exon:10033;Parent=Msa0457470-mRNA-1 |
| chr3_3 | exon | 52269902 | 52270006 | 52269902 | ID=Msa0457470-mRNA-1:exon:10034;Parent=Msa0457470-mRNA-1 |
| chr3_3 | five_prime_UTR | 52264894 | 52265117 | 52264894 | ID=Msa0457470-mRNA-1:five_prime_utr;Parent=Msa0457470-mRNA-1 |
| chr3_3 | CDS | 52265118 | 52265183 | 52265118 | ID=Msa0457470-mRNA-1:cds;Parent=Msa0457470-mRNA-1 |
| chr3_3 | CDS | 52265383 | 52265461 | 52265383 | ID=Msa0457470-mRNA-1:cds;Parent=Msa0457470-mRNA-1 |
| chr3_3 | CDS | 52267003 | 52267050 | 52267003 | ID=Msa0457470-mRNA-1:cds;Parent=Msa0457470-mRNA-1 |
| chr3_3 | CDS | 52267555 | 52267737 | 52267555 | ID=Msa0457470-mRNA-1:cds;Parent=Msa0457470-mRNA-1 |
| chr3_3 | CDS | 52267849 | 52267924 | 52267849 | ID=Msa0457470-mRNA-1:cds;Parent=Msa0457470-mRNA-1 |
| chr3_3 | CDS | 52269477 | 52269615 | 52269477 | ID=Msa0457470-mRNA-1:cds;Parent=Msa0457470-mRNA-1 |
| chr3_3 | three_prime_UTR | 52269616 | 52269874 | 52269616 | ID=Msa0457470-mRNA-1:three_prime_utr;Parent=Msa0457470-mRNA-1 |
| chr3_3 | three_prime_UTR | 52269902 | 52270006 | 52269902 | ID=Msa0457470-mRNA-1:three_prime_utr;Parent=Msa0457470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
