AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0458830


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0458830 MtrunA17_Chr3g0106231 88.260 477 54 2 1 477 1 475 0.0 876
Msa0458830 MtrunA17_Chr3g0106251 95.268 317 11 1 161 477 5 317 0.0 621
Msa0458830 MtrunA17_Chr5g0431441 55.120 459 174 8 18 454 18 466 5.78e-178 507
Msa0458830 MtrunA17_Chr5g0431361 50.328 457 197 10 15 453 9 453 4.05e-149 433
Msa0458830 MtrunA17_Chr5g0431421 48.775 449 211 8 16 453 8 448 1.13e-142 416
Msa0458830 MtrunA17_Chr5g0431401 48.330 449 213 8 16 453 8 448 3.43e-142 415
Msa0458830 MtrunA17_Chr5g0431371 47.661 449 216 7 16 453 8 448 3.32e-141 412
Msa0458830 MtrunA17_Chr5g0431431 48.293 410 133 9 9 407 2 343 2.88e-118 351
Msa0458830 MtrunA17_Chr5g0432731 55.705 298 125 3 161 454 3 297 7.66e-113 335
Msa0458830 MtrunA17_Chr3g0106241 82.412 199 24 3 1 199 1 188 7.72e-109 320
Msa0458830 MtrunA17_Chr7g0250001 32.450 453 280 12 18 454 6 448 9.24e-60 203
Msa0458830 MtrunA17_Chr6g0464861 32.473 465 285 13 9 455 2 455 2.48e-59 201
Msa0458830 MtrunA17_Chr6g0464871 31.304 460 284 14 16 455 21 468 6.13e-59 201
Msa0458830 MtrunA17_Chr6g0464841 30.870 460 286 13 16 455 9 456 1.34e-58 199
Msa0458830 MtrunA17_Chr6g0464921 31.868 455 281 14 18 453 11 455 3.20e-58 199
Msa0458830 MtrunA17_Chr6g0464881 32.166 457 278 13 18 454 11 455 4.59e-58 198
Msa0458830 MtrunA17_Chr8g0377921 28.838 482 282 13 16 454 1 464 1.01e-57 197
Msa0458830 MtrunA17_Chr8g0380531 32.104 461 281 14 18 456 10 460 4.01e-54 188
Msa0458830 MtrunA17_Chr5g0414331 29.412 459 293 13 18 458 13 458 7.05e-53 184
Msa0458830 MtrunA17_Chr6g0454341 29.814 483 279 16 18 454 10 478 1.24e-52 184
Msa0458830 MtrunA17_Chr5g0414321 30.435 460 283 15 18 456 11 454 1.40e-52 184
Msa0458830 MtrunA17_Chr8g0377941 29.019 479 303 13 16 464 1 472 2.42e-52 183
Msa0458830 MtrunA17_Chr3g0078841 28.512 484 290 14 15 454 7 478 2.48e-52 184
Msa0458830 MtrunA17_Chr5g0426431 28.893 488 285 14 13 454 7 478 7.35e-52 182
Msa0458830 MtrunA17_Chr7g0249981 30.417 480 288 15 18 471 25 484 8.78e-52 182
Msa0458830 MtrunA17_Chr3g0092641 29.098 488 284 15 13 454 7 478 1.07e-51 182
Msa0458830 MtrunA17_Chr3g0121991 29.485 485 294 15 10 453 68 545 2.71e-51 182
Msa0458830 MtrunA17_Chr3g0122001 29.387 473 292 14 18 453 6 473 6.80e-51 186
Msa0458830 MtrunA17_Chr3g0122001 29.448 489 299 15 5 453 470 952 4.40e-49 181
Msa0458830 MtrunA17_Chr8g0336331 28.274 481 290 14 17 454 9 477 1.49e-50 179
Msa0458830 MtrunA17_Chr3g0118671 30.083 482 279 17 18 454 6 474 2.28e-50 178
Msa0458830 MtrunA17_Chr4g0053501 29.314 481 270 16 18 454 11 465 3.52e-50 178
Msa0458830 MtrunA17_Chr6g0454141 27.950 483 290 14 18 454 10 480 6.54e-50 177
Msa0458830 MtrunA17_Chr6g0454151 27.310 487 286 14 18 454 10 478 2.52e-49 176
Msa0458830 MtrunA17_Chr5g0401721 27.607 489 279 17 19 456 9 473 5.81e-49 174
Msa0458830 MtrunA17_Chr6g0454191 27.893 484 290 15 18 454 10 481 1.45e-48 173
Msa0458830 MtrunA17_Chr8g0359821 27.423 485 288 14 18 454 10 478 3.16e-48 172
Msa0458830 MtrunA17_Chr6g0454331 26.804 485 295 13 18 454 7 479 6.27e-48 172
Msa0458830 MtrunA17_Chr7g0249931 30.349 458 287 15 18 455 40 485 1.13e-47 171
Msa0458830 MtrunA17_Chr3g0118771 29.668 482 281 18 18 454 21 489 2.60e-47 170
Msa0458830 MtrunA17_Chr6g0454291 26.380 489 290 13 18 454 7 477 2.83e-47 170
Msa0458830 MtrunA17_Chr2g0278711 26.087 483 295 14 18 454 11 477 2.90e-47 170
Msa0458830 MtrunA17_Chr6g0454121 28.395 486 289 15 15 454 7 479 4.01e-47 169
Msa0458830 MtrunA17_Chr6g0454401 27.010 485 293 16 18 454 10 481 2.56e-46 167
Msa0458830 MtrunA17_Chr3g0118701 28.138 494 297 18 7 454 2 483 2.56e-46 167
Msa0458830 MtrunA17_Chr3g0118661 29.638 442 248 17 18 411 13 439 3.47e-46 167
Msa0458830 MtrunA17_Chr3g0118691 29.352 494 291 19 7 454 2 483 4.40e-46 167
Msa0458830 MtrunA17_Chr6g0454361 27.386 482 294 15 18 454 11 481 1.10e-45 166
Msa0458830 MtrunA17_Chr6g0454201 27.593 482 293 15 18 454 11 481 1.19e-45 166
Msa0458830 MtrunA17_Chr6g0453961 27.893 484 290 16 18 454 19 490 1.78e-45 165
Msa0458830 MtrunA17_Chr6g0454321 28.059 474 283 14 18 446 10 470 2.05e-45 167
Msa0458830 MtrunA17_Chr6g0454261 26.446 484 296 13 18 454 10 480 3.22e-45 164
Msa0458830 MtrunA17_Chr3g0118711 28.067 481 290 16 18 454 13 481 5.25e-45 164
Msa0458830 MtrunA17_Chr6g0454301 27.917 480 292 13 18 454 263 731 6.21e-45 167
Msa0458830 MtrunA17_Chr6g0454301 29.915 234 145 4 232 454 5 230 2.03e-29 122
Msa0458830 MtrunA17_Chr6g0454131 28.866 485 288 15 15 454 7 479 7.28e-45 163
Msa0458830 MtrunA17_Chr6g0454181 27.216 485 291 15 18 454 10 480 7.68e-45 163
Msa0458830 MtrunA17_Chr7g0232411 27.389 471 274 15 18 442 6 454 1.85e-44 162
Msa0458830 MtrunA17_Chr4g0053321 26.962 497 300 17 19 474 27 501 3.27e-44 162
Msa0458830 MtrunA17_Chr4g0050341 27.629 485 283 18 18 450 19 487 3.48e-44 162
Msa0458830 MtrunA17_Chr7g0217881 28.571 469 287 12 18 454 10 462 1.62e-43 159
Msa0458830 MtrunA17_Chr1g0207971 28.694 467 281 16 18 453 8 453 9.53e-43 157
Msa0458830 MtrunA17_Chr7g0265101 27.734 512 281 19 6 455 4 488 1.13e-42 158
Msa0458830 MtrunA17_Chr6g0452771 25.767 489 293 13 18 454 10 480 1.52e-42 157
Msa0458830 MtrunA17_Chr7g0275511 28.803 493 271 16 1 442 1 464 2.61e-42 156
Msa0458830 MtrunA17_Chr1g0207951 29.498 478 278 19 18 457 656 1112 3.08e-42 160
Msa0458830 MtrunA17_Chr1g0207951 28.541 466 292 14 18 457 124 574 8.52e-42 159
Msa0458830 MtrunA17_Chr5g0440421 26.044 503 290 18 18 455 10 495 1.34e-41 155
Msa0458830 MtrunA17_Chr5g0432741 52.632 152 62 3 15 159 7 155 1.36e-41 146
Msa0458830 MtrunA17_Chr8g0347281 27.386 482 289 14 1 442 1 461 1.89e-41 154
Msa0458830 MtrunA17_Chr7g0243771 27.789 475 285 16 18 446 6 468 2.46e-41 154
Msa0458830 MtrunA17_Chr6g0453951 26.141 482 300 16 18 454 57 527 2.99e-41 154
Msa0458830 MtrunA17_Chr5g0423981 26.752 471 276 14 18 454 10 445 3.32e-41 152
Msa0458830 MtrunA17_Chr3g0098111 26.543 486 290 14 18 457 9 473 5.70e-41 152
Msa0458830 MtrunA17_Chr4g0011051 26.962 497 288 16 18 455 9 489 5.81e-41 153
Msa0458830 MtrunA17_Chr7g0243871 27.629 485 297 14 18 461 9 480 5.81e-41 153
Msa0458830 MtrunA17_Chr7g0265151 26.283 487 300 15 18 455 9 485 6.12e-41 153
Msa0458830 MtrunA17_Chr7g0265051 27.146 501 296 16 6 455 4 486 6.85e-41 153
Msa0458830 MtrunA17_Chr8g0365811 28.059 474 290 14 19 453 496 957 1.72e-40 155
Msa0458830 MtrunA17_Chr8g0365811 28.873 426 256 15 18 403 9 427 1.14e-34 138
Msa0458830 MtrunA17_Chr6g0454211 25.558 493 289 14 18 454 297 767 2.49e-40 154
Msa0458830 MtrunA17_Chr6g0454211 29.703 202 114 5 167 363 58 236 6.03e-19 90.1
Msa0458830 MtrunA17_Chr6g0454351 26.195 481 284 16 18 454 12 465 2.95e-40 150
Msa0458830 MtrunA17_Chr7g0232391 27.350 468 278 14 18 442 6 454 3.61e-40 150
Msa0458830 MtrunA17_Chr7g0275681 26.694 487 292 15 18 455 12 482 3.68e-40 150
Msa0458830 MtrunA17_Chr1g0207861 28.112 498 261 16 17 453 7 468 5.12e-40 150
Msa0458830 MtrunA17_Chr7g0243951 26.931 479 287 16 18 446 11 476 8.28e-40 150
Msa0458830 MtrunA17_Chr7g0243931 27.235 481 284 18 18 446 17 483 1.70e-39 149
Msa0458830 MtrunA17_Chr8g0335161 26.923 468 283 14 17 442 5 455 5.63e-39 147
Msa0458830 MtrunA17_Chr8g0335141 27.115 461 288 12 19 443 10 458 6.04e-39 147
Msa0458830 MtrunA17_Chr7g0249961 36.820 239 135 7 235 463 38 270 7.19e-39 142
Msa0458830 MtrunA17_Chr1g0207931 26.360 478 246 11 18 457 92 501 7.99e-39 147
Msa0458830 MtrunA17_Chr3g0118751 27.966 472 273 19 18 454 6 445 1.05e-38 146
Msa0458830 MtrunA17_Chr7g0243631 27.406 478 287 17 18 446 13 479 1.30e-38 146
Msa0458830 MtrunA17_Chr3g0112761 25.880 483 303 17 12 463 2 460 1.79e-38 145
Msa0458830 MtrunA17_Chr3g0112771 26.652 469 297 16 12 454 5 452 2.22e-38 145
Msa0458830 MtrunA17_Chr7g0232341 25.773 485 294 14 17 456 5 468 2.32e-38 145
Msa0458830 MtrunA17_Chr5g0442561 25.150 501 287 14 14 454 1 473 2.75e-38 145
Msa0458830 MtrunA17_Chr7g0243681 26.294 483 295 16 18 453 11 479 5.15e-38 145
Msa0458830 MtrunA17_Chr8g0336691 26.793 474 286 13 12 442 913 1368 5.40e-38 148
Msa0458830 MtrunA17_Chr8g0336691 25.316 474 281 13 18 442 13 462 7.60e-36 142
Msa0458830 MtrunA17_Chr8g0336691 26.770 452 286 12 12 442 474 901 3.25e-34 137
Msa0458830 MtrunA17_Chr7g0243801 27.254 477 285 16 18 446 7 469 5.64e-38 144
Msa0458830 MtrunA17_Chr7g0218831 27.195 467 274 15 16 450 4 436 6.17e-38 144
Msa0458830 MtrunA17_Chr8g0347271 27.536 483 283 16 3 442 4 462 9.63e-38 144
Msa0458830 MtrunA17_Chr1g0179901 25.097 514 309 19 6 460 4 500 1.03e-37 144
Msa0458830 MtrunA17_Chr7g0243861 27.689 502 281 19 5 446 1 480 1.08e-37 144
Msa0458830 MtrunA17_Chr7g0232331 26.096 479 298 15 17 455 5 467 2.10e-37 142
Msa0458830 MtrunA17_Chr7g0218811 27.155 464 283 14 14 450 11 446 4.03e-37 141
Msa0458830 MtrunA17_Chr8g0361411 25.586 469 309 12 12 455 2 455 5.65e-37 141
Msa0458830 MtrunA17_Chr5g0429711 26.294 483 285 16 17 456 10 464 6.97e-37 141
Msa0458830 MtrunA17_Chr8g0336651 27.292 480 278 16 12 442 775 1232 8.80e-37 144
Msa0458830 MtrunA17_Chr8g0336651 26.427 473 275 16 18 442 6 453 9.05e-33 132
Msa0458830 MtrunA17_Chr8g0336651 32.394 213 119 6 232 442 574 763 1.07e-25 111
Msa0458830 MtrunA17_Chr4g0044521 27.706 462 290 11 23 451 14 464 9.65e-37 141
Msa0458830 MtrunA17_Chr6g0459311 26.068 468 281 15 19 442 14 460 9.87e-37 141
Msa0458830 MtrunA17_Chr1g0153451 25.478 471 289 12 18 446 6 456 1.09e-36 140
Msa0458830 MtrunA17_Chr7g0218841 27.312 465 277 17 16 450 4 437 1.19e-36 140
Msa0458830 MtrunA17_Chr4g0014061 25.862 464 294 13 19 443 10 462 1.32e-36 140
Msa0458830 MtrunA17_Chr7g0265041 24.644 491 314 11 14 455 7 490 1.34e-36 141
Msa0458830 MtrunA17_Chr1g0161351 28.421 475 287 16 18 453 37 497 1.46e-36 141
Msa0458830 MtrunA17_Chr5g0448521 25.767 489 286 16 18 454 5 468 1.67e-36 140
Msa0458830 MtrunA17_Chr4g0032331 26.013 469 287 15 19 454 9 450 2.82e-36 139
Msa0458830 MtrunA17_Chr5g0419761 25.355 493 299 13 18 455 9 487 4.56e-36 139
Msa0458830 MtrunA17_Chr5g0419771 26.465 495 299 17 13 454 31 513 5.06e-36 139
Msa0458830 MtrunA17_Chr7g0218821 25.208 480 283 14 14 450 1 447 6.33e-36 138
Msa0458830 MtrunA17_Chr1g0207831 27.061 473 289 16 19 453 9 463 7.12e-36 138
Msa0458830 MtrunA17_Chr5g0412111 26.514 479 295 15 18 457 5 465 9.42e-36 138
Msa0458830 MtrunA17_Chr6g0462551 25.532 470 304 12 16 449 1 460 1.11e-35 138
Msa0458830 MtrunA17_Chr3g0079731 25.103 486 279 16 19 442 7 469 1.27e-35 138
Msa0458830 MtrunA17_Chr8g0336741 28.602 465 273 18 18 441 13 459 1.29e-35 138
Msa0458830 MtrunA17_Chr5g0426401 29.595 321 197 9 153 454 1 311 1.53e-35 134
Msa0458830 MtrunA17_Chr6g0454171 31.650 297 164 8 173 454 38 310 2.52e-35 134
Msa0458830 MtrunA17_Chr6g0486251 25.957 470 279 16 19 442 7 453 3.07e-35 136
Msa0458830 MtrunA17_Chr6g0486201 25.957 470 279 16 19 442 7 453 3.07e-35 136
Msa0458830 MtrunA17_Chr8g0370941 25.462 487 286 15 17 442 7 477 3.58e-35 137
Msa0458830 MtrunA17_Chr7g0218791 28.166 458 270 17 18 442 5 436 3.61e-35 136
Msa0458830 MtrunA17_Chr6g0449931 26.371 474 291 14 15 446 3 460 1.49e-34 135
Msa0458830 MtrunA17_Chr5g0393591 25.000 488 259 15 16 458 15 440 2.66e-34 134
Msa0458830 MtrunA17_Chr4g0066281 25.376 465 300 11 22 453 16 466 2.67e-34 134
Msa0458830 MtrunA17_Chr7g0243781 25.887 479 300 13 18 453 9 475 3.03e-34 134
Msa0458830 MtrunA17_Chr8g0361371 27.426 474 272 18 19 442 8 459 3.67e-34 134
Msa0458830 MtrunA17_Chr5g0412101 25.720 486 306 14 11 457 5 474 5.28e-34 133
Msa0458830 MtrunA17_Chr8g0366391 25.720 486 294 13 18 453 9 477 6.60e-34 133
Msa0458830 MtrunA17_Chr8g0373301 26.749 486 268 19 12 442 3 455 9.39e-34 132
Msa0458830 MtrunA17_Chr4g0060511 26.471 476 297 18 18 446 11 480 9.89e-34 133
Msa0458830 MtrunA17_Chr5g0442601 23.800 500 305 14 11 454 397 876 1.02e-33 135
Msa0458830 MtrunA17_Chr5g0442601 23.677 359 197 11 69 388 16 336 1.32e-20 95.5
Msa0458830 MtrunA17_Chr7g0235051 25.793 473 270 16 18 446 11 446 1.13e-33 132
Msa0458830 MtrunA17_Chr5g0401851 27.108 498 299 17 5 453 1 483 1.24e-33 132
Msa0458830 MtrunA17_Chr7g0265141 25.673 483 302 13 18 451 9 483 1.61e-33 132
Msa0458830 MtrunA17_Chr7g0243761 27.540 443 263 17 9 403 2 434 1.90e-33 131
Msa0458830 MtrunA17_Chr5g0442581 23.952 501 314 12 14 462 1 486 2.55e-33 132
Msa0458830 MtrunA17_Chr6g0454221 31.466 232 139 4 232 451 5 228 3.02e-33 127
Msa0458830 MtrunA17_Chr6g0462571 23.950 476 288 14 21 447 5 455 4.55e-33 130
Msa0458830 MtrunA17_Chr6g0454271 27.698 278 181 5 188 454 19 287 5.27e-33 127
Msa0458830 MtrunA17_Chr7g0232401 26.598 485 297 17 18 460 6 473 8.07e-33 130
Msa0458830 MtrunA17_Chr5g0442541 23.517 472 300 10 14 442 1 454 1.83e-32 129
Msa0458830 MtrunA17_Chr8g0336731 25.902 471 276 14 20 442 34 479 2.74e-32 129
Msa0458830 MtrunA17_Chr1g0159551 23.899 477 281 17 23 453 19 459 3.34e-32 128
Msa0458830 MtrunA17_Chr3g0118721 29.699 266 164 6 203 454 34 290 3.74e-32 124
Msa0458830 MtrunA17_Chr2g0302961 24.082 490 301 17 14 455 1 467 4.01e-32 128
Msa0458830 MtrunA17_Chr5g0412131 26.042 480 303 14 11 453 5 469 6.69e-32 127
Msa0458830 MtrunA17_Chr5g0442521 23.077 481 295 13 17 442 4 464 1.02e-31 127
Msa0458830 MtrunA17_Chr4g0066221 24.843 479 304 14 22 455 15 482 1.28e-31 127
Msa0458830 MtrunA17_Chr6g0462531 26.151 478 268 15 21 442 5 453 1.37e-31 126
Msa0458830 MtrunA17_Chr5g0442491 23.152 514 283 14 14 454 1 475 1.42e-31 126
Msa0458830 MtrunA17_Chr5g0428081 24.736 473 307 12 22 453 15 479 1.95e-31 126
Msa0458830 MtrunA17_Chr7g0243711 36.019 211 111 6 257 446 102 309 2.04e-31 123
Msa0458830 MtrunA17_Chr2g0302991 23.431 478 316 14 14 455 1 464 2.04e-31 125
Msa0458830 MtrunA17_Chr4g0044501 25.373 469 314 13 18 453 10 475 3.03e-31 125
Msa0458830 MtrunA17_Chr4g0044511 24.894 470 292 13 18 442 40 493 4.22e-31 125
Msa0458830 MtrunA17_Chr8g0355221 25.309 486 305 15 15 453 12 486 6.07e-31 125
Msa0458830 MtrunA17_Chr5g0420801 24.638 483 310 16 15 462 4 467 7.46e-31 124
Msa0458830 MtrunA17_Chr8g0334861 28.272 382 226 12 101 450 95 460 9.96e-31 124
Msa0458830 MtrunA17_Chr6g0462541 26.536 358 220 9 115 447 118 457 2.94e-30 122
Msa0458830 MtrunA17_Chr7g0243851 31.835 267 145 8 209 446 177 435 3.03e-30 122
Msa0458830 MtrunA17_Chr5g0429681 25.979 485 284 19 17 454 43 499 3.65e-30 122
Msa0458830 MtrunA17_Chr8g0334831 26.496 468 268 17 19 430 7 454 3.75e-30 122
Msa0458830 MtrunA17_Chr4g0066201 26.371 474 286 15 22 453 22 474 4.38e-30 122
Msa0458830 MtrunA17_Chr8g0374941 23.126 467 308 14 18 456 977 1420 4.57e-30 124
Msa0458830 MtrunA17_Chr8g0374941 22.757 457 310 12 21 439 14 465 1.15e-26 114
Msa0458830 MtrunA17_Chr8g0374941 24.000 450 291 12 21 428 479 919 2.04e-24 107
Msa0458830 MtrunA17_Chr6g0462521 26.190 462 274 15 21 442 5 439 4.68e-30 122
Msa0458830 MtrunA17_Chr8g0339461 27.926 376 203 13 111 442 109 460 5.26e-30 122
Msa0458830 MtrunA17_Chr6g0463861 24.788 472 302 15 22 453 15 473 9.70e-30 121
Msa0458830 MtrunA17_Chr8g0355011 24.185 368 205 9 111 454 45 362 1.18e-29 119
Msa0458830 MtrunA17_Chr4g0066261 33.636 220 121 5 258 453 263 481 1.23e-29 121
Msa0458830 MtrunA17_Chr4g0042931 26.569 478 284 17 18 451 7 461 1.37e-29 120
Msa0458830 MtrunA17_Chr2g0329111 23.469 490 315 15 19 459 7 485 1.90e-29 120
Msa0458830 MtrunA17_Chr6g0454251 24.810 395 241 11 18 363 7 394 1.95e-29 119
Msa0458830 MtrunA17_Chr4g0042891 32.296 257 139 10 216 451 221 463 2.16e-29 120
Msa0458830 MtrunA17_Chr8g0374901 23.567 471 315 12 21 453 15 478 2.87e-29 120
Msa0458830 MtrunA17_Chr8g0369341 23.494 498 299 14 15 458 4 473 4.79e-29 119
Msa0458830 MtrunA17_Chr4g0066171 24.145 468 307 13 22 455 25 478 4.80e-29 119
Msa0458830 MtrunA17_Chr1g0173121 33.173 208 120 4 263 453 257 462 6.27e-29 119
Msa0458830 MtrunA17_Chr4g0066131 23.355 471 309 11 19 450 14 471 6.71e-29 119
Msa0458830 MtrunA17_Chr7g0232351 25.575 391 228 10 18 363 6 378 6.90e-29 117
Msa0458830 MtrunA17_Chr8g0339601 30.970 268 139 8 205 441 66 318 1.37e-28 115
Msa0458830 MtrunA17_Chr5g0403641 29.433 282 158 6 202 452 230 501 5.04e-28 116
Msa0458830 MtrunA17_Chr8g0339451 31.227 269 139 9 205 442 199 452 6.08e-28 115
Msa0458830 MtrunA17_Chr2g0307961 23.529 476 306 15 18 454 13 469 6.31e-28 115
Msa0458830 MtrunA17_Chr8g0374971 23.140 484 303 17 21 453 15 480 1.34e-27 115
Msa0458830 MtrunA17_Chr5g0442511 23.605 466 285 14 17 442 48 482 1.42e-27 115
Msa0458830 MtrunA17_Chr4g0066151 23.093 472 315 13 19 453 19 479 1.47e-27 115
Msa0458830 MtrunA17_Chr6g0463891 25.755 497 304 18 19 465 13 494 2.97e-27 114
Msa0458830 MtrunA17_Chr6g0454371 34.286 175 98 3 289 454 5 171 4.13e-27 107
Msa0458830 MtrunA17_Chr5g0431391 39.623 159 53 5 9 160 33 155 6.59e-27 108
Msa0458830 MtrunA17_Chr7g0232311 30.980 255 138 8 212 442 212 452 6.87e-27 112
Msa0458830 MtrunA17_Chr7g0241781 23.326 433 279 14 18 431 9 407 7.35e-27 112
Msa0458830 MtrunA17_Chr6g0463851 22.037 481 313 11 22 453 15 482 7.66e-27 113
Msa0458830 MtrunA17_Chr1g0165701 23.577 492 331 14 15 467 12 497 9.53e-27 112
Msa0458830 MtrunA17_Chr7g0218311 33.333 228 125 5 252 453 257 483 1.34e-26 112
Msa0458830 MtrunA17_Chr8g0350881 26.855 283 180 5 200 456 202 483 2.32e-26 111
Msa0458830 MtrunA17_Chr8g0334851 29.730 296 176 10 170 442 172 458 3.18e-26 111
Msa0458830 MtrunA17_Chr6g0482061 26.298 289 176 7 182 447 199 473 3.70e-26 110
Msa0458830 MtrunA17_Chr7g0243911 33.824 204 111 7 255 437 14 214 4.79e-26 105
Msa0458830 MtrunA17_Chr5g0410941 30.667 225 129 5 255 453 266 489 6.51e-26 110
Msa0458830 MtrunA17_Chr7g0243611 32.642 193 112 4 209 385 80 270 6.52e-26 107
Msa0458830 MtrunA17_Chr8g0339631 24.950 501 291 20 17 461 5 476 6.65e-26 110
Msa0458830 MtrunA17_Chr8g0382021 30.137 219 131 4 255 453 272 488 1.29e-25 109
Msa0458830 MtrunA17_Chr1g0153461 30.736 231 119 6 263 468 4 218 1.69e-25 103
Msa0458830 MtrunA17_Chr2g0294931 24.116 481 314 14 19 456 12 484 1.87e-25 108
Msa0458830 MtrunA17_Chr5g0409591 23.385 449 281 13 19 411 5 446 3.58e-25 108
Msa0458830 MtrunA17_Chr7g0241801 25.057 439 275 17 11 431 5 407 4.73e-25 107
Msa0458830 MtrunA17_Chr4g0044481 25.500 400 238 11 17 385 26 396 5.70e-25 107
Msa0458830 MtrunA17_Chr4g0069611 23.649 444 290 13 18 431 15 439 8.52e-25 106
Msa0458830 MtrunA17_Chr7g0265111 22.470 494 330 14 10 456 31 518 1.03e-24 107
Msa0458830 MtrunA17_Chr7g0243811 32.110 218 124 5 204 407 187 394 1.13e-24 105
Msa0458830 MtrunA17_Chr1g0207881 24.169 451 263 12 18 458 8 389 7.70e-24 103
Msa0458830 MtrunA17_Chr2g0294921 23.729 472 315 13 22 453 164 630 7.80e-24 105
Msa0458830 MtrunA17_Chr8g0339441 30.769 208 109 5 263 442 218 418 1.06e-23 103
Msa0458830 MtrunA17_Chr5g0448551 22.601 469 317 14 19 462 8 455 6.88e-23 101
Msa0458830 MtrunA17_Chr8g0374931 26.165 279 180 5 200 453 204 481 6.95e-23 101
Msa0458830 MtrunA17_Chr8g0336261 38.346 133 65 3 289 411 5 130 9.24e-23 94.0
Msa0458830 MtrunA17_Chr2g0278741 24.263 441 290 13 18 428 97 523 9.52e-23 101
Msa0458830 MtrunA17_Chr8g0367221 23.841 453 284 15 18 429 1288 1720 2.25e-22 101
Msa0458830 MtrunA17_Chr8g0367221 24.171 422 252 16 18 393 798 1197 4.12e-21 97.4
Msa0458830 MtrunA17_Chr8g0367221 28.986 207 121 7 202 393 215 410 2.17e-20 95.1
Msa0458830 MtrunA17_Chr4g0072771 21.351 459 316 13 18 451 25 463 2.39e-22 99.8
Msa0458830 MtrunA17_Chr8g0336251 24.115 452 282 15 18 427 7 439 3.84e-22 99.0
Msa0458830 MtrunA17_Chr8g0336321 24.115 452 282 15 18 427 7 439 4.45e-22 99.0
Msa0458830 MtrunA17_Chr5g0416741 23.909 481 295 17 19 446 14 476 4.50e-22 99.0
Msa0458830 MtrunA17_Chr2g0278721 25.223 448 277 15 18 428 15 441 6.23e-22 99.8
Msa0458830 MtrunA17_Chr2g0278721 22.757 457 286 15 18 428 517 952 4.47e-19 90.9
Msa0458830 MtrunA17_Chr2g0294941 26.148 283 183 5 181 438 83 364 1.98e-21 95.9
Msa0458830 MtrunA17_Chr4g0072761 21.444 457 315 15 18 451 15 450 4.52e-21 95.5
Msa0458830 MtrunA17_Chr7g0250021 27.922 308 197 10 18 309 12 310 4.79e-21 94.0
Msa0458830 MtrunA17_Chr6g0466831 22.500 440 306 13 12 428 12 439 6.59e-21 95.1
Msa0458830 MtrunA17_Chr3g0079711 31.285 179 96 5 288 442 2 177 7.86e-21 90.1
Msa0458830 MtrunA17_Chr6g0466841 22.565 421 291 12 12 408 12 421 3.18e-20 93.2
Msa0458830 MtrunA17_Chr5g0427571 27.848 237 152 6 205 427 42 273 3.47e-20 90.9
Msa0458830 MtrunA17_Chr6g0454231 27.273 253 147 7 204 455 4 220 4.12e-20 92.8
Msa0458830 MtrunA17_Chr2g0302851 22.222 441 300 12 18 431 16 440 1.76e-19 90.9
Msa0458830 MtrunA17_Chr4g0039881 23.041 434 285 13 28 431 2 416 2.54e-19 90.1
Msa0458830 MtrunA17_Chr6g0464091 23.438 448 293 14 18 431 18 449 6.11e-18 86.3
Msa0458830 MtrunA17_Chr5g0416821 22.984 496 308 19 19 466 15 484 3.47e-17 84.0
Msa0458830 MtrunA17_Chr7g0231631 26.190 252 162 8 209 446 11 252 4.07e-17 81.6
Msa0458830 MtrunA17_Chr3g0092031 30.233 172 108 4 265 428 6 173 6.76e-17 79.3
Msa0458830 MtrunA17_Chr8g0337381 35.897 117 67 3 327 442 5 114 1.61e-16 76.3
Msa0458830 MtrunA17_Chr4g0066141 28.846 156 100 4 306 453 199 351 2.06e-15 77.8
Msa0458830 MtrunA17_Chr4g0029151 23.043 447 274 14 18 423 20 437 2.16e-15 78.2
Msa0458830 MtrunA17_Chr2g0319791 25.217 230 142 5 215 429 220 434 4.59e-15 77.4
Msa0458830 MtrunA17_Chr4g0029131 26.033 242 152 5 197 423 200 429 1.40e-14 76.3
Msa0458830 MtrunA17_Chr8g0357361 26.042 192 133 3 202 385 58 248 2.29e-13 70.5
Msa0458830 MtrunA17_Chr2g0283041 23.266 447 273 18 18 422 7 425 2.68e-13 71.6
Msa0458830 MtrunA17_Chr1g0196851 24.686 239 153 6 200 423 243 469 1.14e-12 70.1
Msa0458830 MtrunA17_Chr7g0243731 43.421 76 41 2 321 394 5 80 1.17e-12 63.5
Msa0458830 MtrunA17_Chr2g0319731 22.440 459 292 17 9 429 19 451 2.61e-12 68.9
Msa0458830 MtrunA17_Chr8g0334841 33.566 143 83 5 170 309 1 134 3.02e-12 65.1
Msa0458830 MtrunA17_Chr2g0319801 21.616 458 297 17 9 429 2 434 6.97e-12 67.4
Msa0458830 MtrunA17_Chr2g0319751 23.789 227 149 5 215 429 697 911 2.87e-11 66.2
Msa0458830 MtrunA17_Chr6g0454391 33.654 104 50 3 338 429 11 107 5.36e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0458830 AT2G30150.2 45.690 464 226 7 7 455 2 454 5.71e-142 415
Msa0458830 AT2G30140.2 45.455 462 230 7 7 456 2 453 2.46e-139 408
Msa0458830 AT2G30150.1 46.102 449 216 7 22 455 1 438 5.64e-138 404
Msa0458830 AT2G30140.1 45.140 463 231 7 7 456 2 454 8.39e-138 404
Msa0458830 AT1G05675.1 29.935 461 280 11 17 450 5 449 9.29e-58 197
Msa0458830 AT1G22400.1 29.774 487 275 17 18 454 13 482 1.07e-57 198
Msa0458830 AT1G05680.1 29.783 460 282 11 17 450 5 449 1.93e-57 197
Msa0458830 AT1G22360.1 28.454 485 283 15 18 454 10 478 3.91e-57 197
Msa0458830 AT2G36970.1 27.879 495 291 15 18 466 10 484 3.97e-55 192
Msa0458830 AT2G31750.2 31.533 463 282 16 17 456 7 457 2.78e-54 189
Msa0458830 AT2G28080.1 30.353 481 263 16 22 466 22 466 2.84e-54 189
Msa0458830 AT2G31750.1 31.453 461 281 16 17 454 7 455 3.45e-54 188
Msa0458830 AT1G22360.2 28.041 485 273 15 18 454 10 466 2.89e-52 183
Msa0458830 AT1G22340.1 28.834 489 280 15 18 453 13 486 3.75e-52 184
Msa0458830 AT1G78270.1 29.583 480 284 15 18 454 13 481 2.32e-51 181
Msa0458830 AT1G22380.1 27.950 483 288 18 18 454 13 481 7.53e-51 180
Msa0458830 AT1G05560.2 26.392 485 296 12 10 458 47 506 1.43e-50 180
Msa0458830 AT1G05560.1 26.415 477 290 12 18 458 5 456 1.95e-50 179
Msa0458830 AT1G05530.1 26.216 473 299 11 14 454 1 455 2.04e-49 176
Msa0458830 AT2G43840.2 29.362 470 268 15 18 453 7 446 2.98e-48 172
Msa0458830 AT4G15550.1 28.189 486 282 12 15 454 10 474 3.10e-48 173
Msa0458830 AT2G43840.1 29.149 470 269 15 18 453 7 446 1.82e-47 170
Msa0458830 AT4G15490.1 28.986 483 301 16 17 467 7 479 1.87e-47 171
Msa0458830 AT2G23260.1 27.253 455 303 13 17 453 9 453 2.34e-47 170
Msa0458830 AT4G15480.1 28.600 500 276 18 18 465 19 489 8.11e-47 169
Msa0458830 AT2G23250.1 29.083 447 279 18 27 453 7 435 9.34e-46 165
Msa0458830 AT3G21560.1 25.926 513 306 16 1 467 1 485 1.37e-45 166
Msa0458830 AT2G43820.1 28.696 460 284 16 18 453 7 446 1.51e-45 165
Msa0458830 AT4G01070.1 27.601 471 273 15 18 442 8 456 2.13e-45 165
Msa0458830 AT2G31790.1 28.387 465 284 17 17 450 7 453 8.07e-45 163
Msa0458830 AT1G22370.2 27.521 476 294 15 18 454 13 476 1.46e-44 163
Msa0458830 AT1G24100.1 26.496 468 292 12 18 453 11 458 6.10e-44 160
Msa0458830 AT1G10400.1 26.033 484 298 16 14 457 3 466 3.30e-42 156
Msa0458830 AT4G15500.1 26.778 478 294 15 15 455 6 464 2.82e-41 154
Msa0458830 AT2G16890.2 27.755 490 291 19 18 464 9 478 3.58e-41 154
Msa0458830 AT3G21800.1 24.375 480 312 11 19 455 6 477 3.74e-41 154
Msa0458830 AT3G21790.1 26.069 491 292 15 18 453 4 478 1.71e-40 152
Msa0458830 AT2G36750.1 27.143 490 291 15 18 455 10 485 2.04e-40 152
Msa0458830 AT3G02100.1 28.425 489 271 19 7 450 2 456 3.86e-40 150
Msa0458830 AT5G14860.1 26.707 498 279 20 18 456 8 478 3.94e-40 151
Msa0458830 AT5G59590.1 25.210 476 292 12 12 453 4 449 5.28e-40 150
Msa0458830 AT3G53150.1 28.261 506 279 18 18 455 22 511 3.70e-39 149
Msa0458830 AT5G59580.1 25.107 466 292 10 18 453 9 447 4.02e-39 147
Msa0458830 AT3G46700.1 27.313 454 284 11 12 442 3 433 4.68e-39 147
Msa0458830 AT3G53160.1 25.259 483 310 13 18 455 8 484 1.03e-38 147
Msa0458830 AT5G03490.1 27.564 468 279 17 18 451 19 460 1.78e-38 146
Msa0458830 AT3G46660.1 27.174 460 285 12 19 450 15 452 2.33e-38 145
Msa0458830 AT2G36780.1 26.626 492 292 19 18 455 14 490 3.54e-38 145
Msa0458830 AT2G36800.1 24.303 502 292 15 18 455 12 489 5.57e-38 145
Msa0458830 AT3G46670.1 26.190 462 287 12 18 450 9 445 1.26e-37 143
Msa0458830 AT3G46680.1 26.039 457 279 14 18 442 9 438 1.51e-37 143
Msa0458830 AT5G38040.1 27.193 456 280 14 26 453 18 449 3.67e-37 142
Msa0458830 AT3G21780.1 25.934 482 300 14 18 456 4 471 6.96e-37 142
Msa0458830 AT3G46650.1 26.211 454 278 13 18 449 10 428 1.07e-36 140
Msa0458830 AT3G46720.1 27.313 454 280 12 12 442 3 429 1.30e-36 140
Msa0458830 AT2G36770.1 24.852 507 308 17 5 455 1 490 4.71e-36 140
Msa0458830 AT3G11340.1 25.918 463 289 15 19 454 10 445 1.01e-35 138
Msa0458830 AT3G21760.1 24.652 503 292 17 18 456 4 483 2.36e-35 137
Msa0458830 AT4G14090.1 24.459 462 298 13 18 450 13 452 4.55e-35 136
Msa0458830 AT3G21750.1 24.385 488 300 11 18 456 4 471 8.91e-35 135
Msa0458830 AT3G46690.1 26.739 460 284 13 12 442 3 438 9.57e-35 135
Msa0458830 AT4G15280.1 24.230 487 307 14 18 456 4 476 1.00e-34 135
Msa0458830 AT5G26310.1 25.873 487 270 16 14 442 3 456 1.18e-34 135
Msa0458830 AT4G15280.2 24.230 487 307 14 18 456 36 508 1.28e-34 136
Msa0458830 AT2G16890.3 27.294 436 253 18 18 409 9 424 1.54e-34 134
Msa0458830 AT1G01420.2 26.154 455 273 15 18 429 11 445 2.72e-34 134
Msa0458830 AT1G01420.1 26.154 455 273 15 18 429 8 442 2.89e-34 134
Msa0458830 AT2G29730.1 24.059 478 303 14 18 454 5 463 4.38e-34 134
Msa0458830 AT5G38010.1 25.541 462 300 9 18 453 10 453 9.31e-34 132
Msa0458830 AT2G36760.1 25.761 493 295 19 18 455 14 490 1.24e-33 133
Msa0458830 AT2G29740.1 25.361 485 297 16 17 453 7 474 1.27e-33 132
Msa0458830 AT2G36790.1 25.051 491 301 16 18 455 13 489 3.22e-33 132
Msa0458830 AT1G73880.1 25.205 488 294 17 15 458 11 471 4.39e-33 131
Msa0458830 AT5G05900.1 27.212 452 279 15 18 442 8 436 1.43e-32 129
Msa0458830 AT4G34138.1 25.200 500 294 16 10 453 3 478 2.48e-32 129
Msa0458830 AT2G29710.1 23.431 478 308 14 17 454 4 463 1.10e-31 127
Msa0458830 AT1G07260.1 26.283 487 291 19 17 454 5 472 1.14e-31 127
Msa0458830 AT3G50740.1 26.327 471 267 18 14 429 3 448 1.59e-31 127
Msa0458830 AT4G34131.1 25.367 477 304 14 18 451 10 477 1.97e-31 126
Msa0458830 AT2G15480.2 25.613 367 246 8 112 453 126 490 2.95e-31 126
Msa0458830 AT4G36770.1 25.745 470 271 19 18 436 4 446 3.05e-31 125
Msa0458830 AT5G17050.1 24.678 466 304 14 17 454 11 457 3.23e-31 125
Msa0458830 AT5G17040.1 25.708 459 300 15 17 455 4 441 5.66e-31 124
Msa0458830 AT1G07250.1 25.301 498 289 17 17 457 5 476 2.60e-30 123
Msa0458830 AT4G15260.1 25.135 370 230 8 120 456 2 357 5.72e-30 120
Msa0458830 AT2G15480.1 25.627 359 246 8 112 453 126 480 6.71e-30 122
Msa0458830 AT3G55700.1 27.491 291 183 5 176 454 177 451 6.97e-30 122
Msa0458830 AT1G51210.1 25.221 452 294 16 1 428 1 432 9.17e-30 121
Msa0458830 AT2G26480.1 25.272 459 301 13 18 454 8 446 1.15e-29 121
Msa0458830 AT1G01390.1 26.593 455 272 15 18 429 8 443 1.20e-29 121
Msa0458830 AT1G01390.2 26.593 455 272 15 18 429 25 460 1.82e-29 121
Msa0458830 AT2G29750.1 25.000 492 295 18 17 456 7 476 1.94e-29 120
Msa0458830 AT2G15490.1 25.275 364 244 9 112 453 123 480 2.43e-29 120
Msa0458830 AT2G15490.3 25.485 361 244 9 112 453 123 477 2.57e-29 120
Msa0458830 AT5G66690.1 25.536 466 294 14 14 440 3 454 8.74e-29 119
Msa0458830 AT1G30530.1 24.945 457 310 13 17 455 11 452 1.67e-28 117
Msa0458830 AT3G16520.3 27.624 362 219 12 115 452 116 458 2.30e-28 117
Msa0458830 AT3G55710.1 29.134 254 153 7 215 454 215 455 1.15e-27 115
Msa0458830 AT1G07240.1 25.798 376 220 11 115 454 124 476 1.54e-27 115
Msa0458830 AT5G05890.1 25.821 457 284 14 18 442 8 441 1.74e-27 115
Msa0458830 AT5G05870.1 23.932 468 303 11 18 453 8 454 3.30e-27 114
Msa0458830 AT5G05880.1 24.729 461 280 14 18 442 8 437 6.59e-27 113
Msa0458830 AT3G16520.2 28.667 300 182 9 115 392 116 405 8.66e-27 112
Msa0458830 AT2G18570.1 23.667 469 296 16 18 442 5 455 1.05e-26 112
Msa0458830 AT1G22370.1 27.273 308 192 9 167 454 11 306 1.08e-26 110
Msa0458830 AT4G34135.1 25.285 439 275 15 18 411 11 441 1.09e-26 112
Msa0458830 AT3G16520.1 28.667 300 182 9 115 392 116 405 1.25e-26 112
Msa0458830 AT5G05860.1 23.932 468 297 14 18 454 9 448 2.27e-26 111
Msa0458830 AT3G22250.1 26.829 492 274 20 12 452 2 458 1.01e-25 109
Msa0458830 AT5G37950.2 25.882 340 226 7 50 371 14 345 1.02e-25 108
Msa0458830 AT5G37950.1 25.507 345 227 7 50 371 14 351 8.93e-25 105
Msa0458830 AT2G18560.1 28.720 289 160 9 183 442 94 365 2.48e-24 104
Msa0458830 AT5G65550.1 22.494 409 272 11 18 393 9 405 6.10e-24 104
Msa0458830 AT5G17030.1 23.579 475 303 14 17 457 11 459 1.34e-23 103
Msa0458830 AT5G12890.1 22.336 488 313 16 18 454 10 482 1.96e-23 103
Msa0458830 AT5G17040.2 27.969 261 162 7 204 455 96 339 1.99e-21 95.5
Msa0458830 AT1G06000.1 24.324 481 272 18 13 453 5 433 3.08e-21 96.3
Msa0458830 AT5G49690.1 26.545 437 281 19 18 429 10 431 4.88e-21 95.9
Msa0458830 AT4G01070.2 25.316 316 194 10 18 309 8 305 6.15e-19 88.6
Msa0458830 AT5G53990.1 24.797 246 156 6 195 429 190 417 1.03e-14 76.6
Msa0458830 AT2G22590.1 32.143 140 82 3 265 392 274 412 1.54e-14 76.3
Msa0458830 AT1G64910.1 21.330 436 295 14 18 429 6 417 3.77e-14 74.7
Msa0458830 AT1G50580.1 21.281 437 295 14 18 429 6 418 5.60e-14 74.3
Msa0458830 AT5G54010.1 20.495 444 283 15 18 423 6 417 1.77e-12 69.7
Msa0458830 AT3G29630.2 24.859 177 121 3 264 429 219 394 3.89e-12 68.6
Msa0458830 AT3G29630.1 24.859 177 121 3 264 429 245 420 4.32e-12 68.6
Msa0458830 AT1G64920.1 20.988 243 165 6 202 429 191 421 4.29e-11 65.5

Find 126 sgRNAs with CRISPR-Local

Find 320 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTTGTTGGTGAGAAATTTA+TGG 0.164939 3_3:+54906709 Msa0458830:CDS
ATAGTTCATATTATAAATTT+AGG 0.181823 3_3:+54912072 Msa0458830:three_prime_UTR
GTTTGGACCAATTGAGTAAA+TGG 0.196898 3_3:-54911166 None:intergenic
ATCCTTCTATAGGTGGTTAT+TGG 0.200123 3_3:+54911484 Msa0458830:CDS
GAAACATATGTGTGGGAAAA+TGG 0.209304 3_3:+54911419 Msa0458830:CDS
TTTAACATTTCCACTTGTTT+TGG 0.212969 3_3:+54911560 Msa0458830:CDS
ATAGTTGAGGATTGGAAAAT+TGG 0.213823 3_3:+54911606 Msa0458830:CDS
ATGGCTCATGGTTAAGGTTT+TGG 0.215432 3_3:-54906510 None:intergenic
ATTATATTCCATCAAATTCT+TGG 0.221396 3_3:+54910977 Msa0458830:CDS
GCTTGCGTTGTAGGAAAATA+TGG 0.263003 3_3:-54906931 None:intergenic
AAACTCCATGGTAATGAAAT+TGG 0.268839 3_3:-54906465 None:intergenic
AATCTTATGTTGTCGGGTTT+TGG 0.270941 3_3:-54906671 None:intergenic
GATAAAGAAATTCATGGATT+TGG 0.273650 3_3:+54911692 Msa0458830:CDS
AACATACCTTACTTTAATCT+TGG 0.291719 3_3:+54911186 Msa0458830:CDS
TCTCTAAATGCTACTAATAA+TGG 0.298126 3_3:+54911222 Msa0458830:CDS
TTTGCAATCATCAAACTCTA+TGG 0.302150 3_3:+54912008 Msa0458830:three_prime_UTR
TACCTAAATGCTTGCGTTGT+AGG 0.320470 3_3:-54906940 None:intergenic
ATATTCCGGTGGCTGCGTTC+TGG 0.321377 3_3:+54906873 Msa0458830:CDS
TAGTTCATATTATAAATTTA+GGG 0.323588 3_3:+54912073 Msa0458830:three_prime_UTR
TTCCTACAACGCAAGCATTT+AGG 0.330420 3_3:+54906938 Msa0458830:CDS
GCAATTCCCATTTACTCAAT+TGG 0.343896 3_3:+54911159 Msa0458830:CDS
AATTGGGTGGAGAGTGAAAA+AGG 0.345078 3_3:+54911623 Msa0458830:CDS
TGTGTTGATAAAGAAATTCA+TGG 0.355843 3_3:+54911686 Msa0458830:CDS
GGATGATAAGTTTGATACTT+TGG 0.358191 3_3:+54911644 Msa0458830:CDS
ATGAATGGTGATGGTAGTTT+TGG 0.362235 3_3:-54906432 None:intergenic
ACTATAATCTTACTAATTAG+TGG 0.365916 3_3:-54911588 None:intergenic
AACCATGAGCCATGTGTTAG+TGG 0.369118 3_3:+54906520 Msa0458830:CDS
TAGCCAATCTATGTAACTTT+GGG 0.380094 3_3:-54911250 None:intergenic
TTCAACCTTTAGATGTTGAT+AGG 0.382743 3_3:+54912049 Msa0458830:three_prime_UTR
TTAGCCAATCTATGTAACTT+TGG 0.384177 3_3:-54911251 None:intergenic
TAACACATGGCTCATGGTTA+AGG 0.385122 3_3:-54906516 None:intergenic
AGATTAAAGTAAGGTATGTT+TGG 0.391403 3_3:-54911183 None:intergenic
AATTTCTCACCAACAACGTT+AGG 0.393861 3_3:-54906704 None:intergenic
AAACATATGTGTGGGAAAAT+GGG 0.397297 3_3:+54911420 Msa0458830:CDS
AACTTGCTGAAGTTCATCAT+AGG 0.402877 3_3:-54906572 None:intergenic
GTTTCAAATCTTATGTTGTC+GGG 0.421152 3_3:-54906677 None:intergenic
TAGTTGAGGATTGGAAAATT+GGG 0.428547 3_3:+54911607 Msa0458830:CDS
GGGCAGTTCGTGTTGGAAAC+CGG 0.432940 3_3:+54906846 Msa0458830:CDS
CTGCCCAAAGTTACATAGAT+TGG 0.433234 3_3:+54911247 Msa0458830:CDS
ATGATAAATGTTGGCGGCCA+CGG 0.435721 3_3:-54906803 None:intergenic
GAGACCATTGCAAAATTTGT+TGG 0.438810 3_3:-54911038 None:intergenic
GTAAGATTATAGTTGAGGAT+TGG 0.440487 3_3:+54911598 Msa0458830:CDS
GAAACCATCCCTAACGTTGT+TGG 0.440966 3_3:+54906695 Msa0458830:CDS
GTATTGTTACATCCTTCTAT+AGG 0.443856 3_3:+54911474 Msa0458830:CDS
AGATGAATCCAAGAATTTGA+TGG 0.446840 3_3:-54910985 None:intergenic
GGGTTGATGTGTCCTCTTGA+TGG 0.448302 3_3:-54906551 None:intergenic
ATCGGTTTCAAGAACACAAA+TGG 0.451220 3_3:+54911323 Msa0458830:CDS
GATGTAACAATACCCTCAAT+TGG 0.455788 3_3:-54911464 None:intergenic
TTTGGACCAATTGAGTAAAT+GGG 0.456999 3_3:-54911165 None:intergenic
TGGAAACCGGAGGAATATTC+CGG 0.460893 3_3:+54906859 Msa0458830:CDS
GGTTTCAAATCTTATGTTGT+CGG 0.462618 3_3:-54906678 None:intergenic
ATGTGTCCTCTTGATGGGTA+TGG 0.463316 3_3:-54906545 None:intergenic
GTCCAATAACCACCTATAGA+AGG 0.466360 3_3:-54911486 None:intergenic
TCATCAAACTCTATGGTTGT+TGG 0.467261 3_3:+54912015 Msa0458830:three_prime_UTR
AGACAAGACATTCATTGTAC+TGG 0.477926 3_3:+54906337 None:intergenic
TAGCGGTGTTCGGTTCTTGT+GGG 0.478986 3_3:+54911371 Msa0458830:CDS
TGAAGCTGTTATGACTGAAA+TGG 0.482629 3_3:+54906739 Msa0458830:CDS
CATTGCACGATAGCGGTGTT+CGG 0.485783 3_3:+54911361 Msa0458830:CDS
ATAGCGGTGTTCGGTTCTTG+TGG 0.489491 3_3:+54911370 Msa0458830:CDS
CCTTCGTTGTTACACAAGAA+TGG 0.489979 3_3:+54906627 Msa0458830:CDS
GGTCTCTCAAAAGTTGTCAA+TGG 0.491098 3_3:+54911055 Msa0458830:CDS
GCCATATGAAATGTACAAAA+CGG 0.493029 3_3:-54911292 None:intergenic
AACGAAGGTGACAAGGATGT+TGG 0.494487 3_3:-54906612 None:intergenic
TTCATATGGCAGTTATCTAT+CGG 0.502988 3_3:+54911305 Msa0458830:CDS
ATTTCTCACCAACAACGTTA+GGG 0.503117 3_3:-54906703 None:intergenic
TTGACACATGAAGCATCAAA+TGG 0.506314 3_3:+54911846 Msa0458830:CDS
CGTTCGAGCGGTTACTCGAT+CGG 0.506470 3_3:+54906768 Msa0458830:CDS
CATCGTCCACGTCGAAGCTG+TGG 0.507494 3_3:+54906897 Msa0458830:CDS
TCCTTCCAATTTCATTACCA+TGG 0.516430 3_3:+54906460 Msa0458830:exon
ACTATCCTATCAACATCTAA+AGG 0.517230 3_3:-54912054 None:intergenic
ACGAAGGTGACAAGGATGTT+GGG 0.517655 3_3:-54906611 None:intergenic
AATTAGTAAGATTATAGTTG+AGG 0.523664 3_3:+54911593 Msa0458830:CDS
CAGCCACCGGAATATTCCTC+CGG 0.528894 3_3:-54906865 None:intergenic
ACTTGCTGAAGTTCATCATA+GGG 0.531644 3_3:-54906571 None:intergenic
TTGAAGAATATAATGGAGAG+TGG 0.537157 3_3:+54911822 Msa0458830:CDS
AAAATAAGAGGGTACACCGT+TGG 0.542121 3_3:-54912115 None:intergenic
TGACATGGTGTGACCAATTG+AGG 0.544676 3_3:+54911451 Msa0458830:CDS
AATGTACAAAACGGAACCAT+GGG 0.545806 3_3:-54911283 None:intergenic
TGTCAACTAGCAATAAAGAA+AGG 0.546800 3_3:+54911768 Msa0458830:CDS
TTGTTACATCCTTCTATAGG+TGG 0.549356 3_3:+54911477 Msa0458830:CDS
GTTATTGGACACATTGTGGT+TGG 0.552161 3_3:+54911499 Msa0458830:CDS
TTGAGGATTGGAAAATTGGG+TGG 0.553176 3_3:+54911610 Msa0458830:CDS
TTTAAGGCATCAATTACTTG+AGG 0.558300 3_3:-54911126 None:intergenic
GTCTAATAGACCTGGTCCAA+CGG 0.558894 3_3:+54912099 Msa0458830:three_prime_UTR
TTATCGCAGATGATAAATGT+TGG 0.559937 3_3:-54906812 None:intergenic
GGTTGGAATTCCGTTATTGA+AGG 0.560659 3_3:+54911516 Msa0458830:CDS
TTGTGTCCAAGATTAAAGTA+AGG 0.561566 3_3:-54911192 None:intergenic
CTCACCAACAACGTTAGGGA+TGG 0.561831 3_3:-54906699 None:intergenic
ATCTTGAAGTTGAAACTCCA+TGG 0.565499 3_3:-54906477 None:intergenic
GGTTGATGTGTCCTCTTGAT+GGG 0.566460 3_3:-54906550 None:intergenic
GGTTCAAGCTCATAAATTGA+AGG 0.569825 3_3:-54911105 None:intergenic
GATGTCCAGAACGCAGCCAC+CGG 0.571674 3_3:-54906878 None:intergenic
ATTGGAAGGAAACAAATGAA+TGG 0.571995 3_3:-54906447 None:intergenic
AAATGGGGTTTGTTGTGACA+TGG 0.574943 3_3:+54911436 Msa0458830:CDS
AACCACTAACACATGGCTCA+TGG 0.577092 3_3:-54906522 None:intergenic
AGAGGGTACACCGTTGGACC+AGG 0.577410 3_3:-54912109 None:intergenic
TGAATTTGTGTATGAATGTG+TGG 0.582541 3_3:-54906388 None:intergenic
TGGTTGTTCTTATCAAGAAG+AGG 0.583294 3_3:-54911018 None:intergenic
AAATGGAAGCACCGTTCGAG+CGG 0.585082 3_3:+54906756 Msa0458830:CDS
CGATCGAGTAACCGCTCGAA+CGG 0.585619 3_3:-54906767 None:intergenic
AAATGTACAAAACGGAACCA+TGG 0.586510 3_3:-54911284 None:intergenic
AACATATGTGTGGGAAAATG+GGG 0.586799 3_3:+54911421 Msa0458830:CDS
ATAGATTGAAACATATGTGT+GGG 0.591805 3_3:+54911412 Msa0458830:CDS
TCCATGGTAATGAAATTGGA+AGG 0.601716 3_3:-54906461 None:intergenic
ATCGTCCACGTCGAAGCTGT+GGG 0.601891 3_3:+54906898 Msa0458830:CDS
ACAAAACGGAACCATGGGGT+TGG 0.607579 3_3:-54911278 None:intergenic
TCGCAGATGATAAATGTTGG+CGG 0.611598 3_3:-54906809 None:intergenic
ATCGGCTTGTACTTCAGCCG+TGG 0.611671 3_3:+54906786 Msa0458830:CDS
AGTGGTTGATCCAAAACAAG+TGG 0.615823 3_3:-54911570 None:intergenic
CAACTAGCAATAAAGAAAGG+TGG 0.616518 3_3:+54911771 Msa0458830:CDS
GACATGGTGTGACCAATTGA+GGG 0.622606 3_3:+54911452 Msa0458830:CDS
CATAGATTGAAACATATGTG+TGG 0.625499 3_3:+54911411 Msa0458830:CDS
TTTCTAGTACAATGAATGTG+TGG 0.631751 3_3:-54906364 None:intergenic
TAGGGATCGTCTAATAGACC+TGG 0.637642 3_3:+54912091 Msa0458830:three_prime_UTR
GTGTAACAACGAAGGTGACA+AGG 0.638110 3_3:-54906619 None:intergenic
GGTGGTTATTGGACACATTG+TGG 0.638646 3_3:+54911495 Msa0458830:CDS
GCATCTGCATTGCACGATAG+CGG 0.641386 3_3:+54911354 Msa0458830:CDS
GTGGTTCCATACCCATCAAG+AGG 0.641548 3_3:+54906539 Msa0458830:CDS
TGGCTAAATCTCCAACCCCA+TGG 0.645076 3_3:+54911267 Msa0458830:CDS
AGGAAACAAATGAATGGTGA+TGG 0.645302 3_3:-54906441 None:intergenic
CCATTCTTGTGTAACAACGA+AGG 0.663289 3_3:-54906627 None:intergenic
CAGTTCGTGTTGGAAACCGG+AGG 0.682058 3_3:+54906849 Msa0458830:CDS
TTGCACCCACAGCTTCGACG+TGG 0.688212 3_3:-54906903 None:intergenic
GGTATGGAACCACTAACACA+TGG 0.690619 3_3:-54906529 None:intergenic
AAACCGGAGGAATATTCCGG+TGG 0.703022 3_3:+54906862 Msa0458830:CDS
ATGTACAAAACGGAACCATG+GGG 0.736762 3_3:-54911282 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAATTAATTTATAATT+AGG - chr3_3:54910041-54910060 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTTTTTA+AGG - chr3_3:54910389-54910408 None:intergenic 0.0%
!! TGTAAGAAAAAAAATATTTA+AGG - chr3_3:54908155-54908174 None:intergenic 10.0%
!! AGTATATACATTTATATTTA+AGG - chr3_3:54908781-54908800 None:intergenic 10.0%
!!! CTTTTTTTATTGATAAAAAA+AGG - chr3_3:54909591-54909610 None:intergenic 10.0%
!! TATAATGTTTGTAAAAAAAA+AGG + chr3_3:54910242-54910261 Msa0458830:intron 10.0%
!! ATAGTTCATATTATAAATTT+AGG + chr3_3:54912072-54912091 Msa0458830:three_prime_UTR 10.0%
!! TAGTTCATATTATAAATTTA+GGG + chr3_3:54912073-54912092 Msa0458830:three_prime_UTR 10.0%
!! TAAAAATGTCAAAACTAATT+TGG - chr3_3:54907203-54907222 None:intergenic 15.0%
!! ACTAATATCAAATATTTATG+AGG + chr3_3:54907382-54907401 Msa0458830:intron 15.0%
!!! TCGATTAATTAATATCATTT+TGG - chr3_3:54907422-54907441 None:intergenic 15.0%
!!! ACTTATCATGTTTAATTTAA+TGG - chr3_3:54907616-54907635 None:intergenic 15.0%
!!! ATATCACTAATTATTTTTGT+TGG - chr3_3:54908004-54908023 None:intergenic 15.0%
!!! TGCTTTTTTTTTTTAAGAAA+GGG - chr3_3:54908115-54908134 None:intergenic 15.0%
!!! AATTTTATCATATTATTCGT+AGG - chr3_3:54908360-54908379 None:intergenic 15.0%
!! ATAAATTCAATCAATGATTT+GGG - chr3_3:54908427-54908446 None:intergenic 15.0%
!! TATAAATTCAATCAATGATT+TGG - chr3_3:54908428-54908447 None:intergenic 15.0%
!!! AAAAAATGTGATTTTAAGTA+AGG + chr3_3:54908929-54908948 Msa0458830:intron 15.0%
!! AAATATACATGATATTTGTT+AGG - chr3_3:54909682-54909701 None:intergenic 15.0%
!! AAGATCTTAACAAAATTTAT+AGG - chr3_3:54909856-54909875 None:intergenic 15.0%
!!! AATTTTGTTAAGATCTTTTA+AGG + chr3_3:54909859-54909878 Msa0458830:intron 15.0%
!!! ATTTTGTTAAGATCTTTTAA+GGG + chr3_3:54909860-54909879 Msa0458830:intron 15.0%
!! TTACAAAAGTAAATAGTAAA+CGG + chr3_3:54910219-54910238 Msa0458830:intron 15.0%
!! TTAGAAATAACATTCTAATT+AGG - chr3_3:54910801-54910820 None:intergenic 15.0%
!! TCTGACTTATAAAAATTAAG+AGG + chr3_3:54907238-54907257 Msa0458830:intron 20.0%
!! TATTAATTAATCGAAAACCA+AGG + chr3_3:54907428-54907447 Msa0458830:intron 20.0%
!!! TGTAGTTTTCAAAAACTTTT+GGG - chr3_3:54908055-54908074 None:intergenic 20.0%
!!! GTGCTTTTTTTTTTTAAGAA+AGG - chr3_3:54908116-54908135 None:intergenic 20.0%
!! AATATTTAAGGAAATTTCCA+TGG - chr3_3:54908143-54908162 None:intergenic 20.0%
!! TCAATTTGAATGAATGAATA+TGG - chr3_3:54908187-54908206 None:intergenic 20.0%
!!! AACATGTGTCATATTTTTAT+TGG - chr3_3:54908898-54908917 None:intergenic 20.0%
!! TAAGGAAATTGAAACATAAA+TGG + chr3_3:54908947-54908966 Msa0458830:intron 20.0%
!!! ATGAGATGTTTGATTTTAAT+TGG + chr3_3:54909069-54909088 Msa0458830:intron 20.0%
!!! ATGTTTGATTTTAATTGGTT+GGG + chr3_3:54909074-54909093 Msa0458830:intron 20.0%
!!! TTGCAATATCTATTTTGAAA+CGG - chr3_3:54909306-54909325 None:intergenic 20.0%
!!! GATATCTATTTTGAAATAGA+GGG + chr3_3:54909532-54909551 Msa0458830:intron 20.0%
!!! TTTTTTTGTCTGTGTATTTA+TGG + chr3_3:54909710-54909729 Msa0458830:intron 20.0%
!! TGTGTATTTATGGTAAAAAA+GGG + chr3_3:54909720-54909739 Msa0458830:intron 20.0%
!! TTGTTATCTCCTTTAATATT+TGG + chr3_3:54909796-54909815 Msa0458830:intron 20.0%
!! TGTTATCTCCTTTAATATTT+GGG + chr3_3:54909797-54909816 Msa0458830:intron 20.0%
!! TCTTAACAAAATTTATAGGA+AGG - chr3_3:54909852-54909871 None:intergenic 20.0%
!! TTGAAAACTAAAGGTTTAAT+TGG - chr3_3:54909956-54909975 None:intergenic 20.0%
!!! CTATTTTAGATCTATATACA+TGG + chr3_3:54909982-54910001 Msa0458830:intron 20.0%
!!! TTTGCATTTTTTAATTTGTG+TGG - chr3_3:54910095-54910114 None:intergenic 20.0%
!! AAAAAAAAACAAGACACTTA+AGG + chr3_3:54910403-54910422 Msa0458830:intron 20.0%
!! TAATTAGGAATAATATTCCA+AGG - chr3_3:54910786-54910805 None:intergenic 20.0%
!! ATTATATTCCATCAAATTCT+TGG + chr3_3:54910977-54910996 Msa0458830:CDS 20.0%
!! ACTATAATCTTACTAATTAG+TGG - chr3_3:54911591-54911610 None:intergenic 20.0%
!! AATTAGTAAGATTATAGTTG+AGG + chr3_3:54911593-54911612 Msa0458830:CDS 20.0%
!!! AGCATTTTTGAAGAATATAA+TGG + chr3_3:54911815-54911834 Msa0458830:CDS 20.0%
!!! TTTTGATTGTTTCTTGACAA+AGG - chr3_3:54906995-54907014 None:intergenic 25.0%
!!! TTTGAGTATTAGTTTTTGTC+TGG + chr3_3:54907297-54907316 Msa0458830:intron 25.0%
! AAACTTTGTCTATGTATTTC+TGG - chr3_3:54907473-54907492 None:intergenic 25.0%
!! TAGTTTTCAAAAACTTTTGG+GGG - chr3_3:54908053-54908072 None:intergenic 25.0%
!! GTAGTTTTCAAAAACTTTTG+GGG - chr3_3:54908054-54908073 None:intergenic 25.0%
!! GTGTAGTTTTCAAAAACTTT+TGG - chr3_3:54908056-54908075 None:intergenic 25.0%
! AAACATCACTAAAAACGTAA+AGG + chr3_3:54908281-54908300 Msa0458830:intron 25.0%
! ATTAATGTCGATCTTTCAAT+AGG + chr3_3:54908452-54908471 Msa0458830:intron 25.0%
!!! AGGTAAGATTTTTATTGGTT+GGG - chr3_3:54908853-54908872 None:intergenic 25.0%
!! TAGGTAAGATTTTTATTGGT+TGG - chr3_3:54908854-54908873 None:intergenic 25.0%
!! CTCTTAGGTAAGATTTTTAT+TGG - chr3_3:54908858-54908877 None:intergenic 25.0%
!!! GTGTCATATTTTTATTGGTT+GGG - chr3_3:54908893-54908912 None:intergenic 25.0%
!!! TGTGTCATATTTTTATTGGT+TGG - chr3_3:54908894-54908913 None:intergenic 25.0%
!!! TTTTTGTTGGTTAAAGAAAG+TGG + chr3_3:54908980-54908999 Msa0458830:intron 25.0%
!!! GATGTTTGATTTTAATTGGT+TGG + chr3_3:54909073-54909092 Msa0458830:intron 25.0%
!!! TCTACTTTTAATCAATCAGA+TGG + chr3_3:54909137-54909156 Msa0458830:intron 25.0%
! TATTGTCTCTTCGAAAAAAT+AGG + chr3_3:54909228-54909247 Msa0458830:intron 25.0%
! ATTGTCTCTTCGAAAAAATA+GGG + chr3_3:54909229-54909248 Msa0458830:intron 25.0%
!!! AATATCTATTTTGAAACGGA+TGG - chr3_3:54909302-54909321 None:intergenic 25.0%
!!! CGATATCTATTTTGAAATAG+AGG + chr3_3:54909531-54909550 Msa0458830:intron 25.0%
! CTGTGTATTTATGGTAAAAA+AGG + chr3_3:54909719-54909738 Msa0458830:intron 25.0%
! TAAGTCATCCCAAATATTAA+AGG - chr3_3:54909808-54909827 None:intergenic 25.0%
!!! TAGTCTTGTTTGAAAACTAA+AGG - chr3_3:54909965-54909984 None:intergenic 25.0%
! TCACTATCATATTTAAGTCT+AGG + chr3_3:54910010-54910029 Msa0458830:intron 25.0%
! TATCATATTTAAGTCTAGGA+GGG + chr3_3:54910014-54910033 Msa0458830:intron 25.0%
! AAGGTTTGTAATATGATTCA+TGG + chr3_3:54910438-54910457 Msa0458830:intron 25.0%
! AGGTTTGTAATATGATTCAT+GGG + chr3_3:54910439-54910458 Msa0458830:intron 25.0%
! CATGTGTAAATAACATTTCT+GGG - chr3_3:54910539-54910558 None:intergenic 25.0%
! ACATGTGTAAATAACATTTC+TGG - chr3_3:54910540-54910559 None:intergenic 25.0%
!!! GTAATTTCTAAAACATTCTC+TGG + chr3_3:54910684-54910703 Msa0458830:intron 25.0%
!! AAATTTTTACCAAACACACA+TGG + chr3_3:54910713-54910732 Msa0458830:intron 25.0%
!! AATTTTTACCAAACACACAT+GGG + chr3_3:54910714-54910733 Msa0458830:intron 25.0%
! AGATTAAAGTAAGGTATGTT+TGG - chr3_3:54911186-54911205 None:intergenic 25.0%
! AACATACCTTACTTTAATCT+TGG + chr3_3:54911186-54911205 Msa0458830:CDS 25.0%
! TCTCTAAATGCTACTAATAA+TGG + chr3_3:54911222-54911241 Msa0458830:CDS 25.0%
! ATAGATTGAAACATATGTGT+GGG + chr3_3:54911412-54911431 Msa0458830:CDS 25.0%
! AGAAAAAACACCTTCAATAA+CGG - chr3_3:54911529-54911548 None:intergenic 25.0%
!!! TTATTGAAGGTGTTTTTTCT+GGG + chr3_3:54911529-54911548 Msa0458830:CDS 25.0%
! ACAAGTGGAAATGTTAAAAA+AGG - chr3_3:54911558-54911577 None:intergenic 25.0%
!! TTTAACATTTCCACTTGTTT+TGG + chr3_3:54911560-54911579 Msa0458830:CDS 25.0%
!! TGTGTTGATAAAGAAATTCA+TGG + chr3_3:54911686-54911705 Msa0458830:CDS 25.0%
! GATAAAGAAATTCATGGATT+TGG + chr3_3:54911692-54911711 Msa0458830:CDS 25.0%
!!! ATGGATTTGGATTTTGATTT+AGG + chr3_3:54911705-54911724 Msa0458830:CDS 25.0%
!!! ATTTGGATTTTGATTTAGGA+AGG + chr3_3:54911709-54911728 Msa0458830:CDS 25.0%
!!! TTTGGATTTTGATTTAGGAA+GGG + chr3_3:54911710-54911729 Msa0458830:CDS 25.0%
! TTTCTAGTACAATGAATGTG+TGG - chr3_3:54906367-54906386 None:intergenic 30.0%
TGAATTTGTGTATGAATGTG+TGG - chr3_3:54906391-54906410 None:intergenic 30.0%
!!! AGTTTTGGTTTTGTGTAGTA+AGG - chr3_3:54906420-54906439 None:intergenic 30.0%
ATTGGAAGGAAACAAATGAA+TGG - chr3_3:54906450-54906469 None:intergenic 30.0%
! AAACTCCATGGTAATGAAAT+TGG - chr3_3:54906468-54906487 None:intergenic 30.0%
!!! TTTTGGTTCGGAGTTAATTA+GGG - chr3_3:54906657-54906676 None:intergenic 30.0%
GTTTCAAATCTTATGTTGTC+GGG - chr3_3:54906680-54906699 None:intergenic 30.0%
GGTTTCAAATCTTATGTTGT+CGG - chr3_3:54906681-54906700 None:intergenic 30.0%
TTATCGCAGATGATAAATGT+TGG - chr3_3:54906815-54906834 None:intergenic 30.0%
! TCTGCGATAATTTTCTCTTT+TGG + chr3_3:54906825-54906844 Msa0458830:CDS 30.0%
! CTGCGATAATTTTCTCTTTT+GGG + chr3_3:54906826-54906845 Msa0458830:CDS 30.0%
TAAATTCTCTTGATGTGCTT+GGG - chr3_3:54907592-54907611 None:intergenic 30.0%
!! AAAAAAAAAGCACTAAGCCA+TGG + chr3_3:54908123-54908142 Msa0458830:intron 30.0%
AGAGAGAGAAACAAATATAG+AGG + chr3_3:54908624-54908643 Msa0458830:intron 30.0%
GAGAGAGAAACAAATATAGA+GGG + chr3_3:54908625-54908644 Msa0458830:intron 30.0%
AGAGAGAAACAAATATAGAG+GGG + chr3_3:54908626-54908645 Msa0458830:intron 30.0%
TTTCTCCCACTAAAAAATCA+AGG + chr3_3:54908728-54908747 Msa0458830:intron 30.0%
GGAAATTGAAACATAAATGG+TGG + chr3_3:54908950-54908969 Msa0458830:intron 30.0%
AATTGAAACATAAATGGTGG+TGG + chr3_3:54908953-54908972 Msa0458830:intron 30.0%
ATTGAAACATAAATGGTGGT+GGG + chr3_3:54908954-54908973 Msa0458830:intron 30.0%
TTGGTTAAAGAAAGTGGAAA+AGG + chr3_3:54908986-54909005 Msa0458830:intron 30.0%
CAGATGGTGATACAAATAAT+CGG + chr3_3:54909153-54909172 Msa0458830:intron 30.0%
! ATTTTTGTCCCAGATATCAA+CGG + chr3_3:54909195-54909214 Msa0458830:intron 30.0%
!! GTTAAGATCTTTTAAGGGTT+TGG + chr3_3:54909865-54909884 Msa0458830:intron 30.0%
AAAAGATAGCAACAAATGAG+GGG - chr3_3:54909904-54909923 None:intergenic 30.0%
CAAAAGATAGCAACAAATGA+GGG - chr3_3:54909905-54909924 None:intergenic 30.0%
GTTGACAAGTACCTAAATTT+GGG - chr3_3:54909934-54909953 None:intergenic 30.0%
CTATCATATTTAAGTCTAGG+AGG + chr3_3:54910013-54910032 Msa0458830:intron 30.0%
! ATTGTTATTCGCATGCTTAA+AGG + chr3_3:54910567-54910586 Msa0458830:intron 30.0%
AAAAAGGAAACAAATGTGAG+TGG - chr3_3:54910649-54910668 None:intergenic 30.0%
!! AAACAAACACACCCTTATTT+TGG + chr3_3:54910841-54910860 Msa0458830:intron 30.0%
! ATTCTTTGTTATGCAGAAGA+TGG + chr3_3:54910940-54910959 Msa0458830:intron 30.0%
AGATGAATCCAAGAATTTGA+TGG - chr3_3:54910988-54911007 None:intergenic 30.0%
! ACAACCAACAAATTTTGCAA+TGG + chr3_3:54911034-54911053 Msa0458830:CDS 30.0%
! TTTAAGGCATCAATTACTTG+AGG - chr3_3:54911129-54911148 None:intergenic 30.0%
!! AATTGCGAGCTTTGATTTTA+AGG - chr3_3:54911145-54911164 None:intergenic 30.0%
TTTGGACCAATTGAGTAAAT+GGG - chr3_3:54911168-54911187 None:intergenic 30.0%
TTGTGTCCAAGATTAAAGTA+AGG - chr3_3:54911195-54911214 None:intergenic 30.0%
TAGCCAATCTATGTAACTTT+GGG - chr3_3:54911253-54911272 None:intergenic 30.0%
TTAGCCAATCTATGTAACTT+TGG - chr3_3:54911254-54911273 None:intergenic 30.0%
! TCCGTTTTGTACATTTCATA+TGG + chr3_3:54911291-54911310 Msa0458830:CDS 30.0%
GCCATATGAAATGTACAAAA+CGG - chr3_3:54911295-54911314 None:intergenic 30.0%
TTCATATGGCAGTTATCTAT+CGG + chr3_3:54911305-54911324 Msa0458830:CDS 30.0%
CATAGATTGAAACATATGTG+TGG + chr3_3:54911411-54911430 Msa0458830:CDS 30.0%
AAACATATGTGTGGGAAAAT+GGG + chr3_3:54911420-54911439 Msa0458830:CDS 30.0%
GTATTGTTACATCCTTCTAT+AGG + chr3_3:54911474-54911493 Msa0458830:CDS 30.0%
!!! GTTATTGAAGGTGTTTTTTC+TGG + chr3_3:54911528-54911547 Msa0458830:CDS 30.0%
!!! TATTGAAGGTGTTTTTTCTG+GGG + chr3_3:54911530-54911549 Msa0458830:CDS 30.0%
GTAAGATTATAGTTGAGGAT+TGG + chr3_3:54911598-54911617 Msa0458830:CDS 30.0%
ATAGTTGAGGATTGGAAAAT+TGG + chr3_3:54911606-54911625 Msa0458830:CDS 30.0%
TAGTTGAGGATTGGAAAATT+GGG + chr3_3:54911607-54911626 Msa0458830:CDS 30.0%
GGATGATAAGTTTGATACTT+TGG + chr3_3:54911644-54911663 Msa0458830:CDS 30.0%
TGTCAACTAGCAATAAAGAA+AGG + chr3_3:54911768-54911787 Msa0458830:CDS 30.0%
! TTGAAGAATATAATGGAGAG+TGG + chr3_3:54911822-54911841 Msa0458830:CDS 30.0%
! TTTTGTCATGCTTAGTTGTT+TGG + chr3_3:54911926-54911945 Msa0458830:three_prime_UTR 30.0%
TTTGCAATCATCAAACTCTA+TGG + chr3_3:54912008-54912027 Msa0458830:three_prime_UTR 30.0%
TTCAACCTTTAGATGTTGAT+AGG + chr3_3:54912049-54912068 Msa0458830:three_prime_UTR 30.0%
ACTATCCTATCAACATCTAA+AGG - chr3_3:54912057-54912076 None:intergenic 30.0%
!!! ATGAATGGTGATGGTAGTTT+TGG - chr3_3:54906435-54906454 None:intergenic 35.0%
AGGAAACAAATGAATGGTGA+TGG - chr3_3:54906444-54906463 None:intergenic 35.0%
TCCTTCCAATTTCATTACCA+TGG + chr3_3:54906460-54906479 Msa0458830:exon 35.0%
! TCCATGGTAATGAAATTGGA+AGG - chr3_3:54906464-54906483 None:intergenic 35.0%
ATCTTGAAGTTGAAACTCCA+TGG - chr3_3:54906480-54906499 None:intergenic 35.0%
!!! GTTAAGGTTTTGGGTGATTT+TGG - chr3_3:54906503-54906522 None:intergenic 35.0%
! ACTTGCTGAAGTTCATCATA+GGG - chr3_3:54906574-54906593 None:intergenic 35.0%
!! AACTTGCTGAAGTTCATCAT+AGG - chr3_3:54906575-54906594 None:intergenic 35.0%
!!! GTTTTGGTTCGGAGTTAATT+AGG - chr3_3:54906658-54906677 None:intergenic 35.0%
! AATCTTATGTTGTCGGGTTT+TGG - chr3_3:54906674-54906693 None:intergenic 35.0%
ATTTCTCACCAACAACGTTA+GGG - chr3_3:54906706-54906725 None:intergenic 35.0%
AATTTCTCACCAACAACGTT+AGG - chr3_3:54906707-54906726 None:intergenic 35.0%
! CGTTGTTGGTGAGAAATTTA+TGG + chr3_3:54906709-54906728 Msa0458830:CDS 35.0%
TGAAGCTGTTATGACTGAAA+TGG + chr3_3:54906739-54906758 Msa0458830:CDS 35.0%
CTAAATTCTCTTGATGTGCT+TGG - chr3_3:54907593-54907612 None:intergenic 35.0%
TCAAGCTTTCAATGTTTCAG+TGG - chr3_3:54907671-54907690 None:intergenic 35.0%
ATAAAGGATCGTCAAACGAT+TGG + chr3_3:54907812-54907831 Msa0458830:intron 35.0%
TAAAGGATCGTCAAACGATT+GGG + chr3_3:54907813-54907832 Msa0458830:intron 35.0%
ACACCCAAGTTTATAGCATA+CGG + chr3_3:54908327-54908346 Msa0458830:intron 35.0%
TTGCCGTATGCTATAAACTT+GGG - chr3_3:54908333-54908352 None:intergenic 35.0%
TTTGCCGTATGCTATAAACT+TGG - chr3_3:54908334-54908353 None:intergenic 35.0%
! TTTGATATCGCGTCTTATTG+CGG - chr3_3:54908491-54908510 None:intergenic 35.0%
TAATTACAGCGTTGTGTTGT+TGG - chr3_3:54908529-54908548 None:intergenic 35.0%
! TTTTTCTCCTTCATTCATCG+AGG - chr3_3:54908688-54908707 None:intergenic 35.0%
AGTGAAAACTACGATATAGC+TGG - chr3_3:54908754-54908773 None:intergenic 35.0%
GGGTGTAAGAATAATCTCTT+AGG - chr3_3:54909094-54909113 None:intergenic 35.0%
GGGTGTAAGAATAATCTCTT+AGG - chr3_3:54909094-54909113 None:intergenic 35.0%
! TTTTTGTCCCAGATATCAAC+GGG + chr3_3:54909196-54909215 Msa0458830:intron 35.0%
!!! TTTTGAAACGGATGGAGTAT+CGG - chr3_3:54909294-54909313 None:intergenic 35.0%
TGTTGTACTTCTTGTGACAA+AGG - chr3_3:54909621-54909640 None:intergenic 35.0%
ACAACACGATGATATATGCA+TGG + chr3_3:54909635-54909654 Msa0458830:intron 35.0%
GGGATGACTTACCTAAAATT+AGG + chr3_3:54909817-54909836 Msa0458830:intron 35.0%
TGACTTACCTAAAATTAGGC+AGG + chr3_3:54909821-54909840 Msa0458830:intron 35.0%
GACTTACCTAAAATTAGGCA+GGG + chr3_3:54909822-54909841 Msa0458830:intron 35.0%
!! GATCTTTTAAGGGTTTGGTT+TGG + chr3_3:54909870-54909889 Msa0458830:intron 35.0%
AAAGATAGCAACAAATGAGG+GGG - chr3_3:54909903-54909922 None:intergenic 35.0%
CCAAAAGATAGCAACAAATG+AGG - chr3_3:54909906-54909925 None:intergenic 35.0%
!! CCTCATTTGTTGCTATCTTT+TGG + chr3_3:54909903-54909922 Msa0458830:intron 35.0%
! TTTTGGCACATCCCAAATTT+AGG + chr3_3:54909920-54909939 Msa0458830:intron 35.0%
GGTTGACAAGTACCTAAATT+TGG - chr3_3:54909935-54909954 None:intergenic 35.0%
CTTAAGGTGTGTTTGTTTCA+AGG + chr3_3:54910419-54910438 Msa0458830:intron 35.0%
TTATTCGCATGCTTAAAGGA+TGG + chr3_3:54910571-54910590 Msa0458830:intron 35.0%
TATTCGCATGCTTAAAGGAT+GGG + chr3_3:54910572-54910591 Msa0458830:intron 35.0%
! TTTTACCAAACACACATGTC+TGG + chr3_3:54910717-54910736 Msa0458830:intron 35.0%
TGGGTATGAATGTTATTCCT+TGG + chr3_3:54910766-54910785 Msa0458830:intron 35.0%
! ATAAGGGTGTGTTTGTTTCA+AGG - chr3_3:54910839-54910858 None:intergenic 35.0%
AGCCATTCTAGCCAAAATAA+GGG - chr3_3:54910855-54910874 None:intergenic 35.0%
AAGCCATTCTAGCCAAAATA+AGG - chr3_3:54910856-54910875 None:intergenic 35.0%
TGGTTGTTCTTATCAAGAAG+AGG - chr3_3:54911021-54911040 None:intergenic 35.0%
GAGACCATTGCAAAATTTGT+TGG - chr3_3:54911041-54911060 None:intergenic 35.0%
GGTTCAAGCTCATAAATTGA+AGG - chr3_3:54911108-54911127 None:intergenic 35.0%
GCAATTCCCATTTACTCAAT+TGG + chr3_3:54911159-54911178 Msa0458830:CDS 35.0%
GTTTGGACCAATTGAGTAAA+TGG - chr3_3:54911169-54911188 None:intergenic 35.0%
AATGTACAAAACGGAACCAT+GGG - chr3_3:54911286-54911305 None:intergenic 35.0%
AAATGTACAAAACGGAACCA+TGG - chr3_3:54911287-54911306 None:intergenic 35.0%
GAAACATATGTGTGGGAAAA+TGG + chr3_3:54911419-54911438 Msa0458830:CDS 35.0%
AACATATGTGTGGGAAAATG+GGG + chr3_3:54911421-54911440 Msa0458830:CDS 35.0%
GATGTAACAATACCCTCAAT+TGG - chr3_3:54911467-54911486 None:intergenic 35.0%
TTGTTACATCCTTCTATAGG+TGG + chr3_3:54911477-54911496 Msa0458830:CDS 35.0%
ATCCTTCTATAGGTGGTTAT+TGG + chr3_3:54911484-54911503 Msa0458830:CDS 35.0%
GGATTTGAGAAAAAGAGCAA+AGG + chr3_3:54911731-54911750 Msa0458830:CDS 35.0%
CAACTAGCAATAAAGAAAGG+TGG + chr3_3:54911771-54911790 Msa0458830:CDS 35.0%
! TTGACACATGAAGCATCAAA+TGG + chr3_3:54911846-54911865 Msa0458830:CDS 35.0%
TCATCAAACTCTATGGTTGT+TGG + chr3_3:54912015-54912034 Msa0458830:three_prime_UTR 35.0%
! TGGCTCATGGTTAAGGTTTT+GGG - chr3_3:54906512-54906531 None:intergenic 40.0%
! ATGGCTCATGGTTAAGGTTT+TGG - chr3_3:54906513-54906532 None:intergenic 40.0%
TAACACATGGCTCATGGTTA+AGG - chr3_3:54906519-54906538 None:intergenic 40.0%
CCATTCTTGTGTAACAACGA+AGG - chr3_3:54906630-54906649 None:intergenic 40.0%
CCTTCGTTGTTACACAAGAA+TGG + chr3_3:54906627-54906646 Msa0458830:CDS 40.0%
!!! TATGTTGTCGGGTTTTGGTT+CGG - chr3_3:54906669-54906688 None:intergenic 40.0%
TCGCAGATGATAAATGTTGG+CGG - chr3_3:54906812-54906831 None:intergenic 40.0%
GCTTGCGTTGTAGGAAAATA+TGG - chr3_3:54906934-54906953 None:intergenic 40.0%
TTCCTACAACGCAAGCATTT+AGG + chr3_3:54906938-54906957 Msa0458830:CDS 40.0%
TACCTAAATGCTTGCGTTGT+AGG - chr3_3:54906943-54906962 None:intergenic 40.0%
ACAACGCAAGCATTTAGGTA+TGG + chr3_3:54906943-54906962 Msa0458830:intron 40.0%
!! CTTTTGGGGGAAGATAAGTA+AGG - chr3_3:54908040-54908059 None:intergenic 40.0%
TTAAGAAAGGGTTCAGTACG+TGG - chr3_3:54908103-54908122 None:intergenic 40.0%
! GCTATAAACTTGGGTGTTGT+GGG - chr3_3:54908324-54908343 None:intergenic 40.0%
! TGCTATAAACTTGGGTGTTG+TGG - chr3_3:54908325-54908344 None:intergenic 40.0%
! ATCCGGAAGCATGTGTATTT+CGG - chr3_3:54908390-54908409 None:intergenic 40.0%
!!! GCTGGCCTTGATTTTTTAGT+GGG - chr3_3:54908736-54908755 None:intergenic 40.0%
!!! AGCTGGCCTTGATTTTTTAG+TGG - chr3_3:54908737-54908756 None:intergenic 40.0%
! TTTTGTCCCAGATATCAACG+GGG + chr3_3:54909197-54909216 Msa0458830:intron 40.0%
! TTTGAAACGGATGGAGTATC+GGG - chr3_3:54909293-54909312 None:intergenic 40.0%
!! GGAACATGTTTTAGACGTAC+TGG - chr3_3:54909661-54909680 None:intergenic 40.0%
AAGATAGCAACAAATGAGGG+GGG - chr3_3:54909902-54909921 None:intergenic 40.0%
GATTTCCAGACATGTGTGTT+TGG - chr3_3:54910725-54910744 None:intergenic 40.0%
CATTCATACCCATGTGTGTT+TGG - chr3_3:54910758-54910777 None:intergenic 40.0%
!!! CACCCTTATTTTGGCTAGAA+TGG + chr3_3:54910850-54910869 Msa0458830:intron 40.0%
GCTAGAATGGCTTACGTTAT+AGG + chr3_3:54910863-54910882 Msa0458830:intron 40.0%
TGGCTTACGTTATAGGACAA+AGG + chr3_3:54910870-54910889 Msa0458830:intron 40.0%
GGCTTACGTTATAGGACAAA+GGG + chr3_3:54910871-54910890 Msa0458830:intron 40.0%
GGTCTCTCAAAAGTTGTCAA+TGG + chr3_3:54911055-54911074 Msa0458830:CDS 40.0%
CTGCCCAAAGTTACATAGAT+TGG + chr3_3:54911247-54911266 Msa0458830:CDS 40.0%
ATGTACAAAACGGAACCATG+GGG - chr3_3:54911285-54911304 None:intergenic 40.0%
!! AAATGGGGTTTGTTGTGACA+TGG + chr3_3:54911436-54911455 Msa0458830:CDS 40.0%
GTCCAATAACCACCTATAGA+AGG - chr3_3:54911489-54911508 None:intergenic 40.0%
GTTATTGGACACATTGTGGT+TGG + chr3_3:54911499-54911518 Msa0458830:CDS 40.0%
GGTTGGAATTCCGTTATTGA+AGG + chr3_3:54911516-54911535 Msa0458830:CDS 40.0%
AGTGGTTGATCCAAAACAAG+TGG - chr3_3:54911573-54911592 None:intergenic 40.0%
TTGAGGATTGGAAAATTGGG+TGG + chr3_3:54911610-54911629 Msa0458830:CDS 40.0%
AATTGGGTGGAGAGTGAAAA+AGG + chr3_3:54911623-54911642 Msa0458830:CDS 40.0%
AACCATGAGCCATGTGTTAG+TGG + chr3_3:54906520-54906539 Msa0458830:CDS 45.0%
AACCACTAACACATGGCTCA+TGG - chr3_3:54906525-54906544 None:intergenic 45.0%
GGTATGGAACCACTAACACA+TGG - chr3_3:54906532-54906551 None:intergenic 45.0%
! ATGTGTCCTCTTGATGGGTA+TGG - chr3_3:54906548-54906567 None:intergenic 45.0%
! GGTTGATGTGTCCTCTTGAT+GGG - chr3_3:54906553-54906572 None:intergenic 45.0%
ACGAAGGTGACAAGGATGTT+GGG - chr3_3:54906614-54906633 None:intergenic 45.0%
AACGAAGGTGACAAGGATGT+TGG - chr3_3:54906615-54906634 None:intergenic 45.0%
GTGTAACAACGAAGGTGACA+AGG - chr3_3:54906622-54906641 None:intergenic 45.0%
GAAACCATCCCTAACGTTGT+TGG + chr3_3:54906695-54906714 Msa0458830:CDS 45.0%
ATGATAAATGTTGGCGGCCA+CGG - chr3_3:54906806-54906825 None:intergenic 45.0%
TGGAAACCGGAGGAATATTC+CGG + chr3_3:54906859-54906878 Msa0458830:CDS 45.0%
!! TTTCTGGCTCACTTCGTGTT+GGG - chr3_3:54907457-54907476 None:intergenic 45.0%
!! ATTTCTGGCTCACTTCGTGT+TGG - chr3_3:54907458-54907477 None:intergenic 45.0%
CACCGAAATACACATGCTTC+CGG + chr3_3:54908385-54908404 Msa0458830:intron 45.0%
TCTCCTTCATTCATCGAGGA+GGG - chr3_3:54908684-54908703 None:intergenic 45.0%
TTCTCCTTCATTCATCGAGG+AGG - chr3_3:54908685-54908704 None:intergenic 45.0%
!! GAAACATAAATGGTGGTGGG+TGG + chr3_3:54908957-54908976 Msa0458830:intron 45.0%
TTTGTCCCAGATATCAACGG+GGG + chr3_3:54909198-54909217 Msa0458830:intron 45.0%
AATCTCCCCCGTTGATATCT+GGG - chr3_3:54909206-54909225 None:intergenic 45.0%
TAATCTCCCCCGTTGATATC+TGG - chr3_3:54909207-54909226 None:intergenic 45.0%
! GGAAGACCCTGCCTAATTTT+AGG - chr3_3:54909831-54909850 None:intergenic 45.0%
TGACATGGTGTGACCAATTG+AGG + chr3_3:54911451-54911470 Msa0458830:CDS 45.0%
GACATGGTGTGACCAATTGA+GGG + chr3_3:54911452-54911471 Msa0458830:CDS 45.0%
GGTGGTTATTGGACACATTG+TGG + chr3_3:54911495-54911514 Msa0458830:CDS 45.0%
TAGGGATCGTCTAATAGACC+TGG + chr3_3:54912091-54912110 Msa0458830:three_prime_UTR 45.0%
GTCTAATAGACCTGGTCCAA+CGG + chr3_3:54912099-54912118 Msa0458830:three_prime_UTR 45.0%
!!! TTTAAAATCTTATAAATATT+TGG - chr3_3:54907793-54907812 None:intergenic 5.0%
!!! ATTTATAAGATTTTAAATAA+AGG + chr3_3:54907796-54907815 Msa0458830:intron 5.0%
!! TATTTATTAGTTAAAAAATA+TGG - chr3_3:54909365-54909384 None:intergenic 5.0%
!!! TTTTTTTATTGATAAAAAAA+GGG - chr3_3:54909590-54909609 None:intergenic 5.0%
!! ATTAATGATTTATTAAAAAA+AGG + chr3_3:54910292-54910311 Msa0458830:intron 5.0%
!! CTTAATTAAAAAAATAAAAA+AGG - chr3_3:54910665-54910684 None:intergenic 5.0%
GTGGTTCCATACCCATCAAG+AGG + chr3_3:54906539-54906558 Msa0458830:CDS 50.0%
!! GGGTTGATGTGTCCTCTTGA+TGG - chr3_3:54906554-54906573 None:intergenic 50.0%
CTCACCAACAACGTTAGGGA+TGG - chr3_3:54906702-54906721 None:intergenic 50.0%
!! AAATGGAAGCACCGTTCGAG+CGG + chr3_3:54906756-54906775 Msa0458830:CDS 50.0%
! CTCTTTTGGGCAGTTCGTGT+TGG + chr3_3:54906839-54906858 Msa0458830:CDS 50.0%
AAACCGGAGGAATATTCCGG+TGG + chr3_3:54906862-54906881 Msa0458830:CDS 50.0%
! GTGTTGTTGGTCGTCTTGTG+CGG - chr3_3:54908516-54908535 None:intergenic 50.0%
! CATCGAGGAGGGGTGATTTT+AGG - chr3_3:54908673-54908692 None:intergenic 50.0%
CTCCTTCATTCATCGAGGAG+GGG - chr3_3:54908683-54908702 None:intergenic 50.0%
!!! TGGTGGTGGGTGGTTTTTGT+TGG + chr3_3:54908967-54908986 Msa0458830:intron 50.0%
TAGCAACAAATGAGGGGGGA+GGG - chr3_3:54909898-54909917 None:intergenic 50.0%
ATAGCAACAAATGAGGGGGG+AGG - chr3_3:54909899-54909918 None:intergenic 50.0%
TGGCTAAATCTCCAACCCCA+TGG + chr3_3:54911267-54911286 Msa0458830:CDS 50.0%
ACAAAACGGAACCATGGGGT+TGG - chr3_3:54911281-54911300 None:intergenic 50.0%
GCATCTGCATTGCACGATAG+CGG + chr3_3:54911354-54911373 Msa0458830:CDS 50.0%
! CATTGCACGATAGCGGTGTT+CGG + chr3_3:54911361-54911380 Msa0458830:CDS 50.0%
ATAGCGGTGTTCGGTTCTTG+TGG + chr3_3:54911370-54911389 Msa0458830:CDS 50.0%
TAGCGGTGTTCGGTTCTTGT+GGG + chr3_3:54911371-54911390 Msa0458830:CDS 50.0%
CGATCGAGTAACCGCTCGAA+CGG - chr3_3:54906770-54906789 None:intergenic 55.0%
CGTTCGAGCGGTTACTCGAT+CGG + chr3_3:54906768-54906787 Msa0458830:CDS 55.0%
!! ATCGGCTTGTACTTCAGCCG+TGG + chr3_3:54906786-54906805 Msa0458830:CDS 55.0%
GGGCAGTTCGTGTTGGAAAC+CGG + chr3_3:54906846-54906865 Msa0458830:CDS 55.0%
CAGTTCGTGTTGGAAACCGG+AGG + chr3_3:54906849-54906868 Msa0458830:CDS 55.0%
CAGCCACCGGAATATTCCTC+CGG - chr3_3:54906868-54906887 None:intergenic 55.0%
ATATTCCGGTGGCTGCGTTC+TGG + chr3_3:54906873-54906892 Msa0458830:CDS 55.0%
ATCGTCCACGTCGAAGCTGT+GGG + chr3_3:54906898-54906917 Msa0458830:CDS 55.0%
CACTTCGTGTTGGGAAGCCT+TGG - chr3_3:54907448-54907467 None:intergenic 55.0%
CACCCCTCCTCGATGAATGA+AGG + chr3_3:54908678-54908697 Msa0458830:intron 55.0%
AGCAACAAATGAGGGGGGAG+GGG - chr3_3:54909897-54909916 None:intergenic 55.0%
GATGTCCAGAACGCAGCCAC+CGG - chr3_3:54906881-54906900 None:intergenic 60.0%
CATCGTCCACGTCGAAGCTG+TGG + chr3_3:54906897-54906916 Msa0458830:CDS 60.0%
TTGCACCCACAGCTTCGACG+TGG - chr3_3:54906906-54906925 None:intergenic 60.0%
GGGCGTCAACGTTGCAGATC+CGG - chr3_3:54908407-54908426 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 54906341 54912128 54906341 ID=Msa0458830;Name=Msa0458830
chr3_3 mRNA 54906341 54912128 54906341 ID=Msa0458830-mRNA-1;Parent=Msa0458830;Name=Msa0458830-mRNA-1;_AED=0.02;_eAED=0.02;_QI=138|1|1|1|1|1|2|220|477
chr3_3 exon 54906341 54906959 54906341 ID=Msa0458830-mRNA-1:exon:10862;Parent=Msa0458830-mRNA-1
chr3_3 exon 54910956 54912128 54910956 ID=Msa0458830-mRNA-1:exon:10863;Parent=Msa0458830-mRNA-1
chr3_3 five_prime_UTR 54906341 54906478 54906341 ID=Msa0458830-mRNA-1:five_prime_utr;Parent=Msa0458830-mRNA-1
chr3_3 CDS 54906479 54906959 54906479 ID=Msa0458830-mRNA-1:cds;Parent=Msa0458830-mRNA-1
chr3_3 CDS 54910956 54911908 54910956 ID=Msa0458830-mRNA-1:cds;Parent=Msa0458830-mRNA-1
chr3_3 three_prime_UTR 54911909 54912128 54911909 ID=Msa0458830-mRNA-1:three_prime_utr;Parent=Msa0458830-mRNA-1
Gene Sequence

>Msa0458830

ATGGAGTTTCAACTTCAAGATCCAAAATCACCCAAAACCTTAACCATGAGCCATGTGTTAGTGGTTCCATACCCATCAAGAGGACACATCAACCCTATGATGAACTTCAGCAAGTTACTTGTCTCTAACAATCCCAACATCCTTGTCACCTTCGTTGTTACACAAGAATGGCTAACCCTAATTAACTCCGAACCAAAACCCGACAACATAAGATTTGAAACCATCCCTAACGTTGTTGGTGAGAAATTTATGGATGTTGTTGAAGCTGTTATGACTGAAATGGAAGCACCGTTCGAGCGGTTACTCGATCGGCTTGTACTTCAGCCGTGGCCGCCAACATTTATCATCTGCGATAATTTTCTCTTTTGGGCAGTTCGTGTTGGAAACCGGAGGAATATTCCGGTGGCTGCGTTCTGGACATCGTCCACGTCGAAGCTGTGGGTGCAATTTTTCCATATTTTCCTACAACGCAAGCATTTAGAAGATGGTGAAAATTTTATAGATTATATTCCATCAAATTCTTGGATTCATCTAGCAGATATTCCTCTTCTTGATAAGAACAACCAACAAATTTTGCAATGGTCTCTCAAAAGTTGTCAATGGATTCTCAAAGCACAATATCTATTACTACCTTCAATTTATGAGCTTGAACCTCAAGTAATTGATGCCTTAAAATCAAAGCTCGCAATTCCCATTTACTCAATTGGTCCAAACATACCTTACTTTAATCTTGGACACAACTCAAATTCTCTAAATGCTACTAATAATGGTGCTGCCCAAAGTTACATAGATTGGCTAAATCTCCAACCCCATGGTTCCGTTTTGTACATTTCATATGGCAGTTATCTATCGGTTTCAAGAACACAAATGGATGAAATTGCATCTGCATTGCACGATAGCGGTGTTCGGTTCTTGTGGGTAGCGCGCGACGAGACTCATAGATTGAAACATATGTGTGGGAAAATGGGGTTTGTTGTGACATGGTGTGACCAATTGAGGGTATTGTTACATCCTTCTATAGGTGGTTATTGGACACATTGTGGTTGGAATTCCGTTATTGAAGGTGTTTTTTCTGGGGTTCCTTTTTTAACATTTCCACTTGTTTTGGATCAACCACTAATTAGTAAGATTATAGTTGAGGATTGGAAAATTGGGTGGAGAGTGAAAAAGGATGATAAGTTTGATACTTTGGTGAGAAGAGAGAAAATTGTTGTGTTGATAAAGAAATTCATGGATTTGGATTTTGATTTAGGAAGGGATTTGAGAAAAAGAGCAAAGGAGCTTCAGCTTATATGTCAACTAGCAATAAAGAAAGGTGGATCATCAGAAATCAATGTCAAAGCATTTTTGAAGAATATAATGGAGAGTGGTTTGACACATGAAGCATCAAATGGACTACATGAAGTTCAAGTTGCTATTGAGAATTTCAATTAA

Protein sequence

>Msa0458830

MEFQLQDPKSPKTLTMSHVLVVPYPSRGHINPMMNFSKLLVSNNPNILVTFVVTQEWLTLINSEPKPDNIRFETIPNVVGEKFMDVVEAVMTEMEAPFERLLDRLVLQPWPPTFIICDNFLFWAVRVGNRRNIPVAAFWTSSTSKLWVQFFHIFLQRKHLEDGENFIDYIPSNSWIHLADIPLLDKNNQQILQWSLKSCQWILKAQYLLLPSIYELEPQVIDALKSKLAIPIYSIGPNIPYFNLGHNSNSLNATNNGAAQSYIDWLNLQPHGSVLYISYGSYLSVSRTQMDEIASALHDSGVRFLWVARDETHRLKHMCGKMGFVVTWCDQLRVLLHPSIGGYWTHCGWNSVIEGVFSGVPFLTFPLVLDQPLISKIIVEDWKIGWRVKKDDKFDTLVRREKIVVLIKKFMDLDFDLGRDLRKRAKELQLICQLAIKKGGSSEINVKAFLKNIMESGLTHEASNGLHEVQVAIENFN*