Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090060 | XP_003592832.1 | 88.864 | 440 | 38 | 9 | 1 | 435 | 1 | 434 | 0.0 | 755 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090060 | G7IAZ7 | 88.864 | 440 | 38 | 9 | 1 | 435 | 1 | 434 | 0.0 | 755 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016380 | Msa0090060 | 0.810518 | 1.107435e-50 | -8.615850e-47 |
| Msa0022960 | Msa0090060 | 0.813687 | 2.256240e-51 | -8.615850e-47 |
| Msa0027030 | Msa0090060 | 0.811151 | 8.081375e-51 | -8.615850e-47 |
| Msa0037040 | Msa0090060 | 0.816638 | 4.987553e-52 | -8.615850e-47 |
| Msa0039780 | Msa0090060 | 0.820443 | 6.840930e-53 | -8.615850e-47 |
| Msa0042520 | Msa0090060 | 0.802610 | 5.169317e-49 | -8.615850e-47 |
| Msa0053360 | Msa0090060 | 0.804279 | 2.331740e-49 | -8.615850e-47 |
| Msa0056230 | Msa0090060 | 0.803699 | 3.078180e-49 | -8.615850e-47 |
| Msa0067750 | Msa0090060 | 0.809400 | 1.927924e-50 | -8.615850e-47 |
| Msa0079320 | Msa0090060 | 0.813860 | 2.066950e-51 | -8.615850e-47 |
| Msa0087370 | Msa0090060 | 0.820621 | 6.228000e-53 | -8.615850e-47 |
| Msa0089470 | Msa0090060 | 0.812848 | 3.447624e-51 | -8.615850e-47 |
| Msa0089700 | Msa0090060 | 0.817609 | 3.017265e-52 | -8.615850e-47 |
| Msa0090060 | Msa0091300 | 0.804175 | 2.451028e-49 | -8.615850e-47 |
| Msa0090060 | Msa0097470 | 0.820920 | 5.314159e-53 | -8.615850e-47 |
| Msa0090060 | Msa0098800 | 0.813651 | 2.297605e-51 | -8.615850e-47 |
| Msa0090060 | Msa0105500 | 0.805680 | 1.187804e-49 | -8.615850e-47 |
| Msa0090060 | Msa0127910 | 0.827729 | 1.332036e-54 | -8.615850e-47 |
| Msa0090060 | Msa0138340 | 0.815293 | 9.956652e-52 | -8.615850e-47 |
| Msa0090060 | Msa0140870 | 0.808207 | 3.468357e-50 | -8.615850e-47 |
| Msa0090060 | Msa0147960 | 0.811784 | 5.886794e-51 | -8.615850e-47 |
| Msa0090060 | Msa0158890 | 0.812367 | 4.392847e-51 | -8.615850e-47 |
| Msa0090060 | Msa0159240 | 0.830976 | 2.168247e-55 | -8.615850e-47 |
| Msa0090060 | Msa0165820 | 0.813071 | 3.080776e-51 | -8.615850e-47 |
| Msa0090060 | Msa0174060 | 0.811439 | 6.996914e-51 | -8.615850e-47 |
| Msa0090060 | Msa0175240 | 0.824893 | 6.307168e-54 | -8.615850e-47 |
| Msa0090060 | Msa0178440 | 0.811361 | 7.275489e-51 | -8.615850e-47 |
| Msa0090060 | Msa0186400 | 0.834021 | 3.813437e-56 | -8.615850e-47 |
| Msa0090060 | Msa0194750 | 0.825092 | 5.660468e-54 | -8.615850e-47 |
| Msa0090060 | Msa0195810 | 0.815632 | 8.370013e-52 | -8.615850e-47 |
| Msa0090060 | Msa0208040 | 0.802613 | 5.162477e-49 | -8.615850e-47 |
| Msa0090060 | Msa0212950 | 0.806830 | 6.800189e-50 | -8.615850e-47 |
| Msa0090060 | Msa0225070 | 0.803110 | 4.075323e-49 | -8.615850e-47 |
| Msa0090060 | Msa0225080 | 0.811977 | 5.344615e-51 | -8.615850e-47 |
| Msa0090060 | Msa0232660 | 0.822757 | 1.996400e-53 | -8.615850e-47 |
| Msa0090060 | Msa0236690 | 0.813032 | 3.142116e-51 | -8.615850e-47 |
| Msa0090060 | Msa0238140 | -0.800339 | 1.509807e-48 | -8.615850e-47 |
| Msa0090060 | Msa0238530 | 0.806008 | 1.013131e-49 | -8.615850e-47 |
| Msa0090060 | Msa0266150 | 0.815678 | 8.172308e-52 | -8.615850e-47 |
| Msa0090060 | Msa0267320 | 0.800570 | 1.354628e-48 | -8.615850e-47 |
| Msa0090060 | Msa0270730 | 0.802045 | 6.759073e-49 | -8.615850e-47 |
| Msa0090060 | Msa0275250 | 0.826728 | 2.313435e-54 | -8.615850e-47 |
| Msa0090060 | Msa0308300 | 0.815401 | 9.420640e-52 | -8.615850e-47 |
| Msa0090060 | Msa0314680 | 0.821166 | 4.664676e-53 | -8.615850e-47 |
| Msa0090060 | Msa0315720 | 0.838198 | 3.316759e-57 | -8.615850e-47 |
| Msa0090060 | Msa0331070 | 0.805688 | 1.182753e-49 | -8.615850e-47 |
| Msa0090060 | Msa0334450 | 0.810696 | 1.013770e-50 | -8.615850e-47 |
| Msa0090060 | Msa0364030 | 0.810139 | 1.336999e-50 | -8.615850e-47 |
| Msa0090060 | Msa0369080 | 0.800656 | 1.301236e-48 | -8.615850e-47 |
| Msa0090060 | Msa0382060 | 0.814804 | 1.278137e-51 | -8.615850e-47 |
| Msa0090060 | Msa0385850 | 0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa0090060 | Msa0390590 | 0.830131 | 3.490777e-55 | -8.615850e-47 |
| Msa0090060 | Msa0403740 | 0.810007 | 1.427350e-50 | -8.615850e-47 |
| Msa0090060 | Msa0419150 | 0.807440 | 5.048760e-50 | -8.615850e-47 |
| Msa0090060 | Msa0431560 | 0.802080 | 6.647164e-49 | -8.615850e-47 |
| Msa0090060 | Msa0437820 | 0.805105 | 1.567178e-49 | -8.615850e-47 |
| Msa0090060 | Msa0450890 | 0.801130 | 1.041011e-48 | -8.615850e-47 |
| Msa0090060 | Msa0456450 | 0.803942 | 2.739757e-49 | -8.615850e-47 |
| Msa0090060 | Msa0464980 | 0.820481 | 6.705717e-53 | -8.615850e-47 |
| Msa0090060 | Msa0469770 | 0.805135 | 1.544701e-49 | -8.615850e-47 |
| Msa0090060 | Msa0476570 | 0.807595 | 4.680695e-50 | -8.615850e-47 |
| Msa0090060 | Msa0483090 | 0.807512 | 4.874768e-50 | -8.615850e-47 |
| Msa0090060 | Msa0519070 | 0.800190 | 1.619114e-48 | -8.615850e-47 |
| Msa0090060 | Msa0523420 | 0.814554 | 1.452388e-51 | -8.615850e-47 |
| Msa0090060 | Msa0527210 | 0.816725 | 4.768767e-52 | -8.615850e-47 |
| Msa0090060 | Msa0536970 | 0.805079 | 1.587275e-49 | -8.615850e-47 |
| Msa0090060 | Msa0557440 | 0.803162 | 3.976301e-49 | -8.615850e-47 |
| Msa0090060 | Msa0565370 | 0.826125 | 3.221072e-54 | -8.615850e-47 |
| Msa0090060 | Msa0565430 | 0.820375 | 7.091139e-53 | -8.615850e-47 |
| Msa0090060 | Msa0574220 | 0.824209 | 9.137886e-54 | -8.615850e-47 |
| Msa0090060 | Msa0582270 | 0.815375 | 9.549800e-52 | -8.615850e-47 |
| Msa0090060 | Msa0588110 | 0.808945 | 2.412822e-50 | -8.615850e-47 |
| Msa0090060 | Msa0602320 | 0.800950 | 1.132908e-48 | -8.615850e-47 |
| Msa0090060 | Msa0603310 | -0.809432 | 1.897949e-50 | -8.615850e-47 |
| Msa0090060 | Msa0616890 | 0.824356 | 8.437460e-54 | -8.615850e-47 |
| Msa0090060 | Msa0619690 | 0.801785 | 7.641649e-49 | -8.615850e-47 |
| Msa0090060 | Msa0625900 | 0.800967 | 1.124215e-48 | -8.615850e-47 |
| Msa0090060 | Msa0651000 | 0.808035 | 3.774591e-50 | -8.615850e-47 |
| Msa0090060 | Msa0652220 | 0.815035 | 1.136215e-51 | -8.615850e-47 |
| Msa0090060 | Msa0663690 | 0.801282 | 9.692964e-49 | -8.615850e-47 |
| Msa0090060 | Msa0673620 | 0.805557 | 1.260040e-49 | -8.615850e-47 |
| Msa0090060 | Msa0677160 | 0.809398 | 1.930353e-50 | -8.615850e-47 |
| Msa0090060 | Msa0683200 | 0.805973 | 1.030583e-49 | -8.615850e-47 |
| Msa0090060 | Msa0692870 | 0.820880 | 5.428849e-53 | -8.615850e-47 |
| Msa0090060 | Msa0694800 | 0.823830 | 1.121498e-53 | -8.615850e-47 |
| Msa0090060 | Msa0702020 | 0.830257 | 3.252167e-55 | -8.615850e-47 |
| Msa0090060 | Msa0717540 | 0.822312 | 2.533848e-53 | -8.615850e-47 |
| Msa0090060 | Msa0720130 | 0.808707 | 2.712875e-50 | -8.615850e-47 |
| Msa0090060 | Msa0733460 | 0.820446 | 6.831601e-53 | -8.615850e-47 |
| Msa0090060 | Msa0752490 | 0.827791 | 1.287316e-54 | -8.615850e-47 |
| Msa0090060 | Msa0752950 | 0.829719 | 4.398412e-55 | -8.615850e-47 |
| Msa0090060 | Msa0754020 | 0.803963 | 2.713078e-49 | -8.615850e-47 |
| Msa0090060 | Msa0756670 | 0.842447 | 2.571700e-58 | -8.615850e-47 |
| Msa0090060 | Msa0756700 | 0.823398 | 1.415480e-53 | -8.615850e-47 |
| Msa0090060 | Msa0758880 | 0.809657 | 1.697944e-50 | -8.615850e-47 |
| Msa0090060 | Msa0762480 | 0.808279 | 3.348300e-50 | -8.615850e-47 |
| Msa0090060 | Msa0769910 | 0.803062 | 4.169273e-49 | -8.615850e-47 |
| Msa0090060 | Msa0770540 | 0.817759 | 2.791595e-52 | -8.615850e-47 |
| Msa0090060 | Msa0795460 | -0.807540 | 4.808747e-50 | -8.615850e-47 |
| Msa0090060 | Msa0797980 | 0.831763 | 1.388160e-55 | -8.615850e-47 |
| Msa0090060 | Msa0802790 | 0.805255 | 1.458127e-49 | -8.615850e-47 |
| Msa0090060 | Msa0807100 | 0.804447 | 2.150823e-49 | -8.615850e-47 |
| Msa0090060 | Msa0812020 | 0.802958 | 4.381985e-49 | -8.615850e-47 |
| Msa0090060 | Msa0829770 | 0.821449 | 4.013815e-53 | -8.615850e-47 |
| Msa0090060 | Msa0833030 | 0.808589 | 2.875705e-50 | -8.615850e-47 |
| Msa0090060 | Msa0836060 | 0.838375 | 2.985055e-57 | -8.615850e-47 |
| Msa0090060 | Msa0842370 | 0.807581 | 4.712502e-50 | -8.615850e-47 |
| Msa0090060 | Msa0844870 | 0.837515 | 4.967136e-57 | -8.615850e-47 |
| Msa0090060 | Msa0844970 | 0.834864 | 2.342386e-56 | -8.615850e-47 |
| Msa0090060 | Msa0866060 | 0.804367 | 2.234712e-49 | -8.615850e-47 |
| Msa0090060 | Msa0868050 | 0.826971 | 2.024160e-54 | -8.615850e-47 |
| Msa0090060 | Msa0869320 | 0.806670 | 7.350420e-50 | -8.615850e-47 |
| Msa0090060 | Msa0872890 | 0.804489 | 2.107456e-49 | -8.615850e-47 |
| Msa0090060 | Msa0925630 | 0.801274 | 9.727548e-49 | -8.615850e-47 |
| Msa0090060 | Msa0934290 | 0.812112 | 4.995068e-51 | -8.615850e-47 |
| Msa0090060 | Msa0967900 | 0.807215 | 5.635327e-50 | -8.615850e-47 |
| Msa0090060 | Msa0971780 | 0.813593 | 2.366583e-51 | -8.615850e-47 |
| Msa0090060 | Msa1029030 | 0.816760 | 4.682714e-52 | -8.615850e-47 |
| Msa0090060 | Msa1032790 | 0.820954 | 5.219254e-53 | -8.615850e-47 |
| Msa0090060 | Msa1039440 | 0.811802 | 5.835003e-51 | -8.615850e-47 |
| Msa0090060 | Msa1050120 | -0.801526 | 8.637660e-49 | -8.615850e-47 |
| Msa0090060 | Msa1066790 | 0.806793 | 6.920880e-50 | -8.615850e-47 |
| Msa0090060 | Msa1078210 | 0.803654 | 3.143706e-49 | -8.615850e-47 |
| Msa0090060 | Msa1083620 | 0.845188 | 4.746968e-59 | -8.615850e-47 |
| Msa0090060 | Msa1088400 | 0.800845 | 1.190701e-48 | -8.615850e-47 |
| Msa0090060 | Msa1093190 | 0.800796 | 1.217937e-48 | -8.615850e-47 |
| Msa0090060 | Msa1104020 | 0.800594 | 1.339493e-48 | -8.615850e-47 |
| Msa0090060 | Msa1112210 | 0.804478 | 2.118926e-49 | -8.615850e-47 |
| Msa0090060 | Msa1128610 | 0.822366 | 2.461540e-53 | -8.615850e-47 |
| Msa0090060 | Msa1129120 | 0.800684 | 1.284232e-48 | -8.615850e-47 |
| Msa0090060 | Msa1132900 | 0.816687 | 4.862701e-52 | -8.615850e-47 |
| Msa0090060 | Msa1134150 | 0.815016 | 1.147237e-51 | -8.615850e-47 |
| Msa0090060 | Msa1143810 | 0.800681 | 1.285932e-48 | -8.615850e-47 |
| Msa0090060 | Msa1156120 | 0.808859 | 2.518360e-50 | -8.615850e-47 |
| Msa0090060 | Msa1194480 | 0.808294 | 3.323552e-50 | -8.615850e-47 |
| Msa0090060 | Msa1198830 | 0.831448 | 1.659692e-55 | -8.615850e-47 |
| Msa0090060 | Msa1199540 | 0.802440 | 5.603909e-49 | -8.615850e-47 |
| Msa0090060 | Msa1202710 | 0.809881 | 1.519546e-50 | -8.615850e-47 |
| Msa0090060 | Msa1205270 | 0.819386 | 1.193336e-52 | -8.615850e-47 |
| Msa0090060 | Msa1206510 | 0.835457 | 1.659553e-56 | -8.615850e-47 |
| Msa0090060 | Msa1213470 | 0.812639 | 3.830749e-51 | -8.615850e-47 |
| Msa0090060 | Msa1260640 | 0.812895 | 3.367531e-51 | -8.615850e-47 |
| Msa0090060 | Msa1267390 | 0.802282 | 6.041925e-49 | -8.615850e-47 |
| Msa0090060 | Msa1277830 | 0.816103 | 6.571345e-52 | -8.615850e-47 |
| Msa0090060 | Msa1277890 | 0.833022 | 6.768183e-56 | -8.615850e-47 |
| Msa0090060 | Msa1277930 | 0.819309 | 1.242425e-52 | -8.615850e-47 |
| Msa0090060 | Msa1296810 | 0.803259 | 3.796713e-49 | -8.615850e-47 |
| Msa0090060 | Msa1298170 | 0.836681 | 8.113925e-57 | -8.615850e-47 |
| Msa0090060 | Msa1300370 | 0.814110 | 1.819940e-51 | -8.615850e-47 |
| Msa0090060 | Msa1320660 | 0.809649 | 1.704305e-50 | -8.615850e-47 |
| Msa0090060 | Msa1326780 | 0.819466 | 1.144650e-52 | -8.615850e-47 |
| Msa0090060 | Msa1328680 | 0.802880 | 4.547294e-49 | -8.615850e-47 |
| Msa0090060 | Msa1341710 | 0.800852 | 1.186828e-48 | -8.615850e-47 |
| Msa0090060 | Msa1342360 | 0.804345 | 2.258464e-49 | -8.615850e-47 |
| Msa0090060 | Msa1346220 | 0.801040 | 1.086227e-48 | -8.615850e-47 |
| Msa0090060 | Msa1348180 | 0.803850 | 2.863599e-49 | -8.615850e-47 |
| Msa0090060 | Msa1352600 | 0.824721 | 6.921927e-54 | -8.615850e-47 |
| Msa0090060 | Msa1357090 | 0.820762 | 5.780089e-53 | -8.615850e-47 |
| Msa0090060 | Msa1360070 | 0.812539 | 4.030122e-51 | -8.615850e-47 |
| Msa0090060 | Msa1361580 | 0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa0090060 | Msa1361670 | 0.824685 | 7.060483e-54 | -8.615850e-47 |
| Msa0090060 | Msa1367690 | 0.817428 | 3.314526e-52 | -8.615850e-47 |
| Msa0090060 | Msa1371060 | 0.822682 | 2.078388e-53 | -8.615850e-47 |
| Msa0090060 | Msa1371540 | 0.821175 | 4.643477e-53 | -8.615850e-47 |
| Msa0090060 | Msa1373310 | 0.832229 | 1.065136e-55 | -8.615850e-47 |
| Msa0090060 | Msa1375980 | 0.857105 | 2.047843e-62 | -8.615850e-47 |
| Msa0090060 | Msa1377980 | 0.803348 | 3.638232e-49 | -8.615850e-47 |
| Msa0090060 | Msa1381340 | 0.804039 | 2.616052e-49 | -8.615850e-47 |
| Msa0090060 | Msa1381830 | 0.812930 | 3.308146e-51 | -8.615850e-47 |
| Msa0090060 | Msa1384970 | 0.813386 | 2.627468e-51 | -8.615850e-47 |
| Msa0090060 | Msa1386910 | 0.806439 | 8.221440e-50 | -8.615850e-47 |
| Msa0090060 | Msa1388720 | 0.803502 | 3.380955e-49 | -8.615850e-47 |
| Msa0090060 | Msa1392570 | 0.818446 | 1.952479e-52 | -8.615850e-47 |
| Msa0090060 | Msa1398150 | 0.804560 | 2.037248e-49 | -8.615850e-47 |
| Msa0090060 | Msa1400290 | 0.802551 | 5.316750e-49 | -8.615850e-47 |
| Msa0090060 | Msa1401640 | 0.815977 | 7.010966e-52 | -8.615850e-47 |
| Msa0090060 | Msa1403820 | 0.847914 | 8.551505e-60 | -8.615850e-47 |
| Msa0090060 | Msa1408280 | 0.805677 | 1.189251e-49 | -8.615850e-47 |
| Msa0090060 | Msa1408860 | 0.801407 | 9.136713e-49 | -8.615850e-47 |
| Msa0090060 | Msa1424250 | 0.842545 | 2.421919e-58 | -8.615850e-47 |
| Msa0090060 | Msa1431510 | 0.824461 | 7.973016e-54 | -8.615850e-47 |
| Msa0090060 | Msa1432100 | 0.807425 | 5.086466e-50 | -8.615850e-47 |
| Msa0090060 | Msa1451200 | 0.813410 | 2.595845e-51 | -8.615850e-47 |
| Msa0090060 | Msa1452230 | 0.819575 | 1.080628e-52 | -8.615850e-47 |
| Msa0090060 | Msa1457390 | 0.845353 | 4.283369e-59 | -8.615850e-47 |
| Msa0090060 | Msa1464470 | 0.813293 | 2.753823e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090060 | MtrunA17_Chr1g0213531 | 88.864 | 440 | 38 | 9 | 1 | 435 | 1 | 434 | 0.0 | 755 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0090060 | AT2G43235.1 | 50.857 | 350 | 158 | 5 | 76 | 420 | 96 | 436 | 2.24e-113 | 340 |
Find 120 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTACTTCAGTTCATATTAA+TGG | 0.156695 | 1_2:+71890661 | Msa0090060:CDS |
| CGTCAATTATGCAGAAATTC+TGG | 0.263143 | 1_2:+71890434 | Msa0090060:CDS |
| ACTAATAATAATCACTAAAA+AGG | 0.263327 | 1_2:+71893063 | Msa0090060:three_prime_UTR |
| CGACTAACCATCTCCATTTC+AGG | 0.280124 | 1_2:-71892055 | None:intergenic |
| CAGCCAGATATTATCTTTCA+TGG | 0.288533 | 1_2:-71892953 | None:intergenic |
| AGAGGTGGTGGTGCTGTGAA+TGG | 0.296250 | 1_2:-71889280 | None:intergenic |
| TATTGTTTGAATTGGTTTCT+AGG | 0.296767 | 1_2:+71889151 | Msa0090060:CDS |
| TGTATTCATCTTGTTCAGTT+AGG | 0.309416 | 1_2:-71889425 | None:intergenic |
| AAGCACCTTATGTTTCTCTT+TGG | 0.310733 | 1_2:+71892112 | Msa0090060:CDS |
| TGAAACGAATTGACGAATAT+TGG | 0.311467 | 1_2:-71888983 | None:intergenic |
| CTACAATAAGGGTATTATTA+TGG | 0.313025 | 1_2:+71889203 | Msa0090060:CDS |
| AAACGCATCTACCTACAATA+AGG | 0.333004 | 1_2:+71889191 | Msa0090060:CDS |
| GTGATGGTGGTGGTAGTAGT+AGG | 0.342276 | 1_2:-71888898 | None:intergenic |
| CCTTCCACCTTGCACTTCAT+AGG | 0.346159 | 1_2:+71889084 | Msa0090060:CDS |
| CTGTTGAACCTACAACTATT+CGG | 0.355323 | 1_2:+71890468 | Msa0090060:CDS |
| GGCAAACATGTTGATGCTTT+AGG | 0.356797 | 1_2:+71891286 | Msa0090060:CDS |
| GATTCTCAACAATTCCTTGC+TGG | 0.359006 | 1_2:+71890688 | Msa0090060:CDS |
| TGTTATGGTCAAGAGTGAAT+AGG | 0.360148 | 1_2:-71889038 | None:intergenic |
| GTTATGGTCAAGAGTGAATA+GGG | 0.363866 | 1_2:-71889037 | None:intergenic |
| ATTAATAGTTGGCCACCATT+TGG | 0.367825 | 1_2:-71889373 | None:intergenic |
| GAGGTGGTGGTGCTGTGAAT+GGG | 0.368704 | 1_2:-71889279 | None:intergenic |
| TTCAAAGACCGCTTAATTGA+CGG | 0.375232 | 1_2:-71889306 | None:intergenic |
| GTACCATGAAAGATAATATC+TGG | 0.382735 | 1_2:+71892950 | Msa0090060:exon |
| GATAAGCATGGTTGTGGAAA+TGG | 0.383399 | 1_2:-71888796 | None:intergenic |
| TTTGAGGGTATTGTTTGAAT+TGG | 0.385299 | 1_2:+71889143 | Msa0090060:CDS |
| TGTCTCCTTGCAGCCTGAAA+TGG | 0.390978 | 1_2:+71892042 | Msa0090060:intron |
| TTAATAGTTGGCCACCATTT+GGG | 0.399245 | 1_2:-71889372 | None:intergenic |
| CATAATAATACCCTTATTGT+AGG | 0.403671 | 1_2:-71889202 | None:intergenic |
| ATTTCCTCCCGAGGAATCTT+CGG | 0.417407 | 1_2:+71891342 | Msa0090060:CDS |
| GCATTGGGATTATTAATAGT+TGG | 0.418090 | 1_2:-71889384 | None:intergenic |
| CTCAAAGGAAATTGCCCAAA+TGG | 0.421635 | 1_2:+71889358 | Msa0090060:CDS |
| TGCAAGAGAAGCTCTTGGTT+TGG | 0.423356 | 1_2:+71892165 | Msa0090060:CDS |
| ATCGCGGTATGCCTCTTTGC+CGG | 0.429399 | 1_2:-71889007 | None:intergenic |
| TGTTGAACCTACAACTATTC+GGG | 0.435983 | 1_2:+71890469 | Msa0090060:CDS |
| ATTCTCAACAATTCCTTGCT+GGG | 0.439822 | 1_2:+71890689 | Msa0090060:CDS |
| TGAAATGGAGATGGTTAGTC+GGG | 0.443445 | 1_2:+71892057 | Msa0090060:CDS |
| AGGTGGTGGTGCTGTGAATG+GGG | 0.448259 | 1_2:-71889278 | None:intergenic |
| TTTGAGTTTATTGTGGCGTT+TGG | 0.448751 | 1_2:-71888866 | None:intergenic |
| GTAATGGAGGCTTTGTTAGT+TGG | 0.449317 | 1_2:+71888702 | Msa0090060:five_prime_UTR |
| ATATCAAAAGCATTGGCATT+GGG | 0.459121 | 1_2:-71889399 | None:intergenic |
| GGTGGAAAAGAGGTGGTTGT+TGG | 0.463264 | 1_2:+71889246 | Msa0090060:CDS |
| AACGCATCTACCTACAATAA+GGG | 0.465536 | 1_2:+71889192 | Msa0090060:CDS |
| ATTCGTCAATTCGTTTCATC+CGG | 0.474810 | 1_2:+71888988 | Msa0090060:CDS |
| GGTGGTGGTGCTGTGAATGG+GGG | 0.474937 | 1_2:-71889277 | None:intergenic |
| CAAAGATATGCCTTCTTCTA+CGG | 0.476956 | 1_2:+71891317 | Msa0090060:CDS |
| GACTAACTTGAATGATATCA+TGG | 0.480760 | 1_2:-71889946 | None:intergenic |
| TATGTTGTCTTCAAGTTGAC+CGG | 0.481031 | 1_2:-71892927 | None:intergenic |
| TTATTATGGTGCGGAGAGAC+AGG | 0.482055 | 1_2:+71889217 | Msa0090060:CDS |
| CAAAACAGAAAAGGCAATGA+TGG | 0.486059 | 1_2:-71889124 | None:intergenic |
| AAGGAGTCCCGAATAGTTGT+AGG | 0.489624 | 1_2:-71890476 | None:intergenic |
| GCTGGGTTTGCTGAAAACAT+TGG | 0.494387 | 1_2:+71890706 | Msa0090060:CDS |
| AGCAATTATCGACAGTAGAA+TGG | 0.497896 | 1_2:+71889904 | Msa0090060:intron |
| GGAAGAAGCGGAGACGAGGC+GGG | 0.504022 | 1_2:-71888818 | None:intergenic |
| CAGAGAGTTTGAGTTTATTG+TGG | 0.507204 | 1_2:-71888873 | None:intergenic |
| AATTGACGGCGCAGAGGTGG+TGG | 0.508350 | 1_2:-71889292 | None:intergenic |
| TTGACGAATATTGGAATCAA+AGG | 0.510004 | 1_2:-71888974 | None:intergenic |
| TTCGAGCTTGTGTTCAGAGA+AGG | 0.512806 | 1_2:-71888923 | None:intergenic |
| CATATCAAAAGCATTGGCAT+TGG | 0.512854 | 1_2:-71889400 | None:intergenic |
| CAATACCCTCAAAACAGAAA+AGG | 0.514129 | 1_2:-71889133 | None:intergenic |
| GGAACAGACCGAAGATTCCT+CGG | 0.515504 | 1_2:-71891350 | None:intergenic |
| GTGGTGGTGCTGTGAATGGG+GGG | 0.518589 | 1_2:-71889276 | None:intergenic |
| TTCAGAGAAGGTGGTGATGG+TGG | 0.525379 | 1_2:-71888911 | None:intergenic |
| CTGAACAAGATGAATACAAG+AGG | 0.525744 | 1_2:+71889430 | Msa0090060:CDS |
| AGGCGGGATAAGCATGGTTG+TGG | 0.526418 | 1_2:-71888802 | None:intergenic |
| TGATGGTGGTGGTAGTAGTA+GGG | 0.530138 | 1_2:-71888897 | None:intergenic |
| CAGGAGTCTCGGTGGAAAAG+AGG | 0.530256 | 1_2:+71889236 | Msa0090060:CDS |
| CGAATATTGGAATCAAAGGA+AGG | 0.534213 | 1_2:-71888970 | None:intergenic |
| ATTAACTGATGCTCGATACA+AGG | 0.536295 | 1_2:-71890495 | None:intergenic |
| GGGATTGCAAGAGAAGCTCT+TGG | 0.537168 | 1_2:+71892160 | Msa0090060:CDS |
| TGGTTTCTAGGTTTGCGTCA+TGG | 0.542864 | 1_2:+71889163 | Msa0090060:CDS |
| CATTCTCAACATTATTGTAC+CGG | 0.549375 | 1_2:+71892908 | Msa0090060:CDS |
| TATTGTGGCGTTTGGTGCGG+CGG | 0.549812 | 1_2:-71888858 | None:intergenic |
| AGAGAAGGTGGTGATGGTGG+TGG | 0.551976 | 1_2:-71888908 | None:intergenic |
| TTTGCAGTGAGGACAGTCAC+GGG | 0.552218 | 1_2:+71892140 | Msa0090060:CDS |
| ATAAGGAAATTGTGTCTCAA+AGG | 0.558092 | 1_2:+71889343 | Msa0090060:CDS |
| TAGGTCCATATCAAAAGCAT+TGG | 0.559057 | 1_2:-71889406 | None:intergenic |
| GCGGCGACTGCGACGTACAA+AGG | 0.562134 | 1_2:-71888839 | None:intergenic |
| CTGAAATGGAGATGGTTAGT+CGG | 0.564106 | 1_2:+71892056 | Msa0090060:CDS |
| TGAACTGAAGTAGAGTAAGT+TGG | 0.565051 | 1_2:-71890652 | None:intergenic |
| CAAAAGACAAGAGCGTGTGC+GGG | 0.565606 | 1_2:-71890776 | None:intergenic |
| CAAAGGAAGAAGCGGAGACG+AGG | 0.566667 | 1_2:-71888822 | None:intergenic |
| GTGTTCAGAGAAGGTGGTGA+TGG | 0.568282 | 1_2:-71888914 | None:intergenic |
| TTCAGTTCATATTAATGGCG+AGG | 0.571469 | 1_2:+71890666 | Msa0090060:CDS |
| GATGCTTACAGACTCGTTCG+AGG | 0.571898 | 1_2:+71889453 | Msa0090060:CDS |
| GCAAAAGACAAGAGCGTGTG+CGG | 0.572608 | 1_2:-71890777 | None:intergenic |
| CTTAATTGACGGCGCAGAGG+TGG | 0.584478 | 1_2:-71889295 | None:intergenic |
| AACTTGAATGATATCATGGT+CGG | 0.586857 | 1_2:-71889942 | None:intergenic |
| AGGAAGAAGCGGAGACGAGG+CGG | 0.588432 | 1_2:-71888819 | None:intergenic |
| GAGCTTGTGTTCAGAGAAGG+TGG | 0.588582 | 1_2:-71888920 | None:intergenic |
| GAGGAAATATCCGTAGAAGA+AGG | 0.589817 | 1_2:-71891327 | None:intergenic |
| CTTGCAGCCTGAAATGGAGA+TGG | 0.589877 | 1_2:+71892048 | Msa0090060:intron |
| CTTTACCAAAGAGAAACATA+AGG | 0.591688 | 1_2:-71892117 | None:intergenic |
| AGATGCTATGTATGTAATGG+AGG | 0.595630 | 1_2:+71888689 | None:intergenic |
| GTGCGGAGAGACAGGAGTCT+CGG | 0.603273 | 1_2:+71889225 | Msa0090060:CDS |
| TTATAGGCATTGGAAATGCA+AGG | 0.604747 | 1_2:+71891265 | Msa0090060:intron |
| CCTATGAAGTGCAAGGTGGA+AGG | 0.605754 | 1_2:-71889084 | None:intergenic |
| GAACAGACCGAAGATTCCTC+GGG | 0.606284 | 1_2:-71891349 | None:intergenic |
| GAAGATTGTGAGGTCTATGA+CGG | 0.607214 | 1_2:-71888947 | None:intergenic |
| GTTTGCAGTGAGGACAGTCA+CGG | 0.610114 | 1_2:+71892139 | Msa0090060:CDS |
| AGCTGCAGACACAATTGTTG+CGG | 0.612752 | 1_2:-71890746 | None:intergenic |
| ATTCGTTTCATCCGGCAAAG+AGG | 0.619371 | 1_2:+71888996 | Msa0090060:CDS |
| GAATATTGGAATCAAAGGAA+GGG | 0.626660 | 1_2:-71888969 | None:intergenic |
| AAAGGAAATTGCCCAAATGG+TGG | 0.626680 | 1_2:+71889361 | Msa0090060:CDS |
| TCTACGGATATTTCCTCCCG+AGG | 0.628715 | 1_2:+71891333 | Msa0090060:CDS |
| CCGCTTAATTGACGGCGCAG+AGG | 0.630008 | 1_2:-71889298 | None:intergenic |
| CAAAGGAAGGGAAGATTGTG+AGG | 0.632587 | 1_2:-71888957 | None:intergenic |
| GAGACGAGGCGGGATAAGCA+TGG | 0.633362 | 1_2:-71888808 | None:intergenic |
| TGAAGTTCCTATGAAGTGCA+AGG | 0.638935 | 1_2:-71889091 | None:intergenic |
| CCTCTGCGCCGTCAATTAAG+CGG | 0.643562 | 1_2:+71889298 | Msa0090060:CDS |
| TGAACAAGATGAATACAAGA+GGG | 0.644744 | 1_2:+71889431 | Msa0090060:CDS |
| GCGACGTACAAAGGAAGAAG+CGG | 0.648097 | 1_2:-71888830 | None:intergenic |
| GTTTATTGTGGCGTTTGGTG+CGG | 0.654882 | 1_2:-71888861 | None:intergenic |
| GAGTCTCGGTGGAAAAGAGG+TGG | 0.656446 | 1_2:+71889239 | Msa0090060:CDS |
| CTTTGGTAAAGTTTGCAGTG+AGG | 0.666887 | 1_2:+71892129 | Msa0090060:CDS |
| CGGAGAGACAGGAGTCTCGG+TGG | 0.667945 | 1_2:+71889228 | Msa0090060:CDS |
| ATAAGGGTATTATTATGGTG+CGG | 0.682812 | 1_2:+71889208 | Msa0090060:CDS |
| CAGACCGAAGATTCCTCGGG+AGG | 0.694458 | 1_2:-71891346 | None:intergenic |
| TGAATAGGGTCTGTAAATCG+CGG | 0.700229 | 1_2:-71889023 | None:intergenic |
| AGTTCCTATGAAGTGCAAGG+TGG | 0.710148 | 1_2:-71889088 | None:intergenic |
| GAAATGGAGATGGTTAGTCG+GGG | 0.713332 | 1_2:+71892058 | Msa0090060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAGAATAATAATAATAATA+AGG | + | chr1_2:71889326-71889345 | Msa0090060:CDS | 10.0% |
| !! | CAATTAGTATATTTATTAAA+AGG | - | chr1_2:71890196-71890215 | None:intergenic | 10.0% |
| !!! | CTTTTAATAAATATACTAAT+TGG | + | chr1_2:71890194-71890213 | Msa0090060:intron | 10.0% |
| !!! | AAATCATTTTCTATAATAAA+TGG | + | chr1_2:71890356-71890375 | Msa0090060:intron | 10.0% |
| !! | ATCATTAAAAATATCTAAAA+TGG | - | chr1_2:71891582-71891601 | None:intergenic | 10.0% |
| !!! | TATTAAAAGGAATTAAGTTT+TGG | - | chr1_2:71890183-71890202 | None:intergenic | 15.0% |
| !! | TTAAATATGAACAAATTTCA+AGG | + | chr1_2:71891015-71891034 | Msa0090060:intron | 15.0% |
| !!! | TTTTTGGTTTTTTCAATTAT+AGG | + | chr1_2:71891249-71891268 | Msa0090060:intron | 15.0% |
| !! | TATTTGCAAATTATTGTTTA+AGG | - | chr1_2:71891374-71891393 | None:intergenic | 15.0% |
| !! | AATATTCATACAAAAAAAGT+GGG | - | chr1_2:71891415-71891434 | None:intergenic | 15.0% |
| !! | AAATATTCATACAAAAAAAG+TGG | - | chr1_2:71891416-71891435 | None:intergenic | 15.0% |
| !! | TTATCCTTTATTATTAACAA+CGG | + | chr1_2:71891500-71891519 | Msa0090060:intron | 15.0% |
| !! | ACTAATAATAATCACTAAAA+AGG | + | chr1_2:71893063-71893082 | Msa0090060:three_prime_UTR | 15.0% |
| !! | TTCAATAGCTAATTAATCTA+AGG | - | chr1_2:71889996-71890015 | None:intergenic | 20.0% |
| !! | TTACTCTTAATCTTATTATC+TGG | + | chr1_2:71890817-71890836 | Msa0090060:intron | 20.0% |
| !! | ACAACATTTAAGAAAGATTT+AGG | - | chr1_2:71890975-71890994 | None:intergenic | 20.0% |
| !! | AATACTCCATTAAAATTCAT+GGG | + | chr1_2:71891226-71891245 | Msa0090060:intron | 20.0% |
| !! | AATAATAAAGGATAACTATG+AGG | - | chr1_2:71891495-71891514 | None:intergenic | 20.0% |
| !! | TAATTCTTTATGCATAAATG+AGG | + | chr1_2:71891643-71891662 | Msa0090060:intron | 20.0% |
| !!! | AAAGAAAACGTTTGAAATTT+CGG | + | chr1_2:71891780-71891799 | Msa0090060:intron | 20.0% |
| !!! | TACTATTAAGGTTTTTATGA+AGG | + | chr1_2:71892411-71892430 | Msa0090060:intron | 20.0% |
| !!! | ACTATTAAGGTTTTTATGAA+GGG | + | chr1_2:71892412-71892431 | Msa0090060:intron | 20.0% |
| !!! | TGTTATAATTTTGATGTTCA+TGG | + | chr1_2:71892636-71892655 | Msa0090060:intron | 20.0% |
| !!! | GTTATAATTTTGATGTTCAT+GGG | + | chr1_2:71892637-71892656 | Msa0090060:intron | 20.0% |
| !! | TAAATAAAATCATGATCGTT+GGG | - | chr1_2:71892668-71892687 | None:intergenic | 20.0% |
| !! | ATAAATAAAATCATGATCGT+TGG | - | chr1_2:71892669-71892688 | None:intergenic | 20.0% |
| !! | AAAAATTCAAACATCAAAGA+AGG | - | chr1_2:71892848-71892867 | None:intergenic | 20.0% |
| !! | AAATGATGACTCTTTTGTTA+TGG | - | chr1_2:71889056-71889075 | None:intergenic | 25.0% |
| !! | TATTGTTTGAATTGGTTTCT+AGG | + | chr1_2:71889151-71889170 | Msa0090060:CDS | 25.0% |
| ! | CATAATAATACCCTTATTGT+AGG | - | chr1_2:71889205-71889224 | None:intergenic | 25.0% |
| !!! | CTACAATAAGGGTATTATTA+TGG | + | chr1_2:71889203-71889222 | Msa0090060:CDS | 25.0% |
| ! | TGAATGAATGAATGAATGAA+GGG | - | chr1_2:71889498-71889517 | None:intergenic | 25.0% |
| ! | ATGAATGAATGAATGAATGA+AGG | - | chr1_2:71889499-71889518 | None:intergenic | 25.0% |
| ! | TAACATCTAAGAGAGTAAAT+TGG | - | chr1_2:71889625-71889644 | None:intergenic | 25.0% |
| ! | TGAAAATTTCTCATGTTAGT+TGG | - | chr1_2:71889648-71889667 | None:intergenic | 25.0% |
| !! | TAAGTTGCAAGTTGAATTAA+AGG | - | chr1_2:71889870-71889889 | None:intergenic | 25.0% |
| ! | TAAGGATGAAGTAAATGAAT+GGG | - | chr1_2:71889978-71889997 | None:intergenic | 25.0% |
| ! | TCTACTTCAGTTCATATTAA+TGG | + | chr1_2:71890661-71890680 | Msa0090060:CDS | 25.0% |
| !! | CAAGGTTATATTTTCTATGA+TGG | + | chr1_2:71891033-71891052 | Msa0090060:intron | 25.0% |
| ! | ACTCAAATGAAAGAATTAGA+TGG | + | chr1_2:71891058-71891077 | Msa0090060:intron | 25.0% |
| ! | CTCAAATGAAAGAATTAGAT+GGG | + | chr1_2:71891059-71891078 | Msa0090060:intron | 25.0% |
| ! | GAATACTCCATTAAAATTCA+TGG | + | chr1_2:71891225-71891244 | Msa0090060:intron | 25.0% |
| !! | CAAAAACCCATGAATTTTAA+TGG | - | chr1_2:71891235-71891254 | None:intergenic | 25.0% |
| !! | CATTAAAATTCATGGGTTTT+TGG | + | chr1_2:71891233-71891252 | Msa0090060:intron | 25.0% |
| !!! | GTTTTTTCAATTATAGGCAT+TGG | + | chr1_2:71891255-71891274 | Msa0090060:intron | 25.0% |
| ! | AACTCCGTTGTTAATAATAA+AGG | - | chr1_2:71891507-71891526 | None:intergenic | 25.0% |
| ! | AATTGAGAAACTTTAATGAG+TGG | - | chr1_2:71891722-71891741 | None:intergenic | 25.0% |
| !! | AAGAAAACGTTTGAAATTTC+GGG | + | chr1_2:71891781-71891800 | Msa0090060:intron | 25.0% |
| ! | TATAGAGAACAAAACACATT+GGG | + | chr1_2:71891832-71891851 | Msa0090060:intron | 25.0% |
| ! | ATTGCTATACATGTTTGAAA+TGG | + | chr1_2:71891891-71891910 | Msa0090060:intron | 25.0% |
| !!! | ATAAGCATTAGATGTTGTTT+TGG | + | chr1_2:71891927-71891946 | Msa0090060:intron | 25.0% |
| ! | CTCTCTAATTGTACTTATTT+GGG | + | chr1_2:71892018-71892037 | Msa0090060:intron | 25.0% |
| ! | TCTCTAATTGTACTTATTTG+GGG | + | chr1_2:71892019-71892038 | Msa0090060:intron | 25.0% |
| ! | AATTGAAAGATAATTGTAGC+TGG | + | chr1_2:71892254-71892273 | Msa0090060:intron | 25.0% |
| ! | AATTGAAAGATAATTGTAGC+TGG | + | chr1_2:71892254-71892273 | Msa0090060:intron | 25.0% |
| !! | ATGTGGAAATTTTCTTTTTC+AGG | - | chr1_2:71892379-71892398 | None:intergenic | 25.0% |
| ! | TAGATGTGATGATACTATTA+AGG | + | chr1_2:71892399-71892418 | Msa0090060:intron | 25.0% |
| ! | AAACTTGACCATTTAAGTAA+TGG | - | chr1_2:71892554-71892573 | None:intergenic | 25.0% |
| ! | GTAAAAATGCTTTAGTACAA+TGG | + | chr1_2:71892705-71892724 | Msa0090060:intron | 25.0% |
| ! | GAGGATTAGATTAAAGAATT+GGG | - | chr1_2:71892871-71892890 | None:intergenic | 25.0% |
| GAATATTGGAATCAAAGGAA+GGG | - | chr1_2:71888972-71888991 | None:intergenic | 30.0% | |
| TTGACGAATATTGGAATCAA+AGG | - | chr1_2:71888977-71888996 | None:intergenic | 30.0% | |
| TGAAACGAATTGACGAATAT+TGG | - | chr1_2:71888986-71889005 | None:intergenic | 30.0% | |
| !! | TTTGAGGGTATTGTTTGAAT+TGG | + | chr1_2:71889143-71889162 | Msa0090060:CDS | 30.0% |
| !! | ATAAGGGTATTATTATGGTG+CGG | + | chr1_2:71889208-71889227 | Msa0090060:CDS | 30.0% |
| ATAAGGAAATTGTGTCTCAA+AGG | + | chr1_2:71889343-71889362 | Msa0090060:CDS | 30.0% | |
| GCATTGGGATTATTAATAGT+TGG | - | chr1_2:71889387-71889406 | None:intergenic | 30.0% | |
| !! | ATATCAAAAGCATTGGCATT+GGG | - | chr1_2:71889402-71889421 | None:intergenic | 30.0% |
| TGTATTCATCTTGTTCAGTT+AGG | - | chr1_2:71889428-71889447 | None:intergenic | 30.0% | |
| TGAACAAGATGAATACAAGA+GGG | + | chr1_2:71889431-71889450 | Msa0090060:CDS | 30.0% | |
| TCAACATCAAAGTAAACATG+AGG | - | chr1_2:71889560-71889579 | None:intergenic | 30.0% | |
| CTTGTCTTGTCTTGTATTAT+AGG | + | chr1_2:71889798-71889817 | Msa0090060:intron | 30.0% | |
| AACTTGAATGATATCATGGT+CGG | - | chr1_2:71889945-71889964 | None:intergenic | 30.0% | |
| GACTAACTTGAATGATATCA+TGG | - | chr1_2:71889949-71889968 | None:intergenic | 30.0% | |
| AAGGATGAAGTAAATGAATG+GGG | - | chr1_2:71889977-71889996 | None:intergenic | 30.0% | |
| CTAAGGATGAAGTAAATGAA+TGG | - | chr1_2:71889979-71889998 | None:intergenic | 30.0% | |
| TCTATATCTACACAAAACCA+CGG | - | chr1_2:71890237-71890256 | None:intergenic | 30.0% | |
| !!! | TACTGACGTGAAAGTTTTTT+TGG | + | chr1_2:71890392-71890411 | Msa0090060:intron | 30.0% |
| !! | TAATCTTGTCTTTTAGCCTT+TGG | + | chr1_2:71890840-71890859 | Msa0090060:intron | 30.0% |
| !! | AATCTTGTCTTTTAGCCTTT+GGG | + | chr1_2:71890841-71890860 | Msa0090060:intron | 30.0% |
| TGTAACTACTAGCATTCTAA+AGG | + | chr1_2:71890884-71890903 | Msa0090060:intron | 30.0% | |
| ! | AGGCAGTTTATATTTTCACT+CGG | + | chr1_2:71890904-71890923 | Msa0090060:intron | 30.0% |
| CAATTTAGAGAGCTTACAAT+TGG | - | chr1_2:71891102-71891121 | None:intergenic | 30.0% | |
| TAAGCTCTCTAAATTGATCA+GGG | + | chr1_2:71891106-71891125 | Msa0090060:intron | 30.0% | |
| ! | CATTTAAGTTACACACTTTC+AGG | - | chr1_2:71891148-71891167 | None:intergenic | 30.0% |
| CTTCCTAGAAAAAGAGTAAT+CGG | - | chr1_2:71891187-71891206 | None:intergenic | 30.0% | |
| !! | TTTTAATGGAGTATTCACGT+GGG | - | chr1_2:71891221-71891240 | None:intergenic | 30.0% |
| !! | ATTTTAATGGAGTATTCACG+TGG | - | chr1_2:71891222-71891241 | None:intergenic | 30.0% |
| TGTTCTCTTTATTCCTTACT+CGG | + | chr1_2:71891442-71891461 | Msa0090060:intron | 30.0% | |
| GTTCTTGGCTATTAGATATT+TGG | + | chr1_2:71891542-71891561 | Msa0090060:intron | 30.0% | |
| ! | TAATGATTTGTCTTTCACTC+CGG | + | chr1_2:71891595-71891614 | Msa0090060:intron | 30.0% |
| AATGAGGAGTAAATACTTTC+TGG | + | chr1_2:71891659-71891678 | Msa0090060:intron | 30.0% | |
| ATGAGGAGTAAATACTTTCT+GGG | + | chr1_2:71891660-71891679 | Msa0090060:intron | 30.0% | |
| TTAATGAGTGGTTATACAGA+TGG | - | chr1_2:71891710-71891729 | None:intergenic | 30.0% | |
| ! | AGAAAACGTTTGAAATTTCG+GGG | + | chr1_2:71891782-71891801 | Msa0090060:intron | 30.0% |
| ! | TTTTGTTCTCTATACTACAG+AGG | - | chr1_2:71891826-71891845 | None:intergenic | 30.0% |
| GTATAGAGAACAAAACACAT+TGG | + | chr1_2:71891831-71891850 | Msa0090060:intron | 30.0% | |
| ACATCTAATGCTTATCTCTA+TGG | - | chr1_2:71891922-71891941 | None:intergenic | 30.0% | |
| AAATCATAAATCAGCAGACA+AGG | - | chr1_2:71891982-71892001 | None:intergenic | 30.0% | |
| GCTCTCTAATTGTACTTATT+TGG | + | chr1_2:71892017-71892036 | Msa0090060:intron | 30.0% | |
| CTTTACCAAAGAGAAACATA+AGG | - | chr1_2:71892120-71892139 | None:intergenic | 30.0% | |
| !!! | GGAAATTTTCTTTTTCAGGA+GGG | - | chr1_2:71892375-71892394 | None:intergenic | 30.0% |
| !!! | TGGAAATTTTCTTTTTCAGG+AGG | - | chr1_2:71892376-71892395 | None:intergenic | 30.0% |
| TAGTATCATCACATCTAATG+TGG | - | chr1_2:71892396-71892415 | None:intergenic | 30.0% | |
| !! | CTGAAAGAGTATTTGAACAT+TGG | + | chr1_2:71892489-71892508 | Msa0090060:intron | 30.0% |
| !! | ATACTATGAAGTTCTGAATG+AGG | + | chr1_2:71892520-71892539 | Msa0090060:intron | 30.0% |
| !! | TACTATGAAGTTCTGAATGA+GGG | + | chr1_2:71892521-71892540 | Msa0090060:intron | 30.0% |
| GGTTTGAACCATTACTTAAA+TGG | + | chr1_2:71892543-71892562 | Msa0090060:intron | 30.0% | |
| GTAAAGAGCAATTCTTTACA+TGG | + | chr1_2:71892727-71892746 | Msa0090060:intron | 30.0% | |
| !! | AGTTGTCTTGTGTTATTTCT+TGG | + | chr1_2:71892814-71892833 | Msa0090060:intron | 30.0% |
| GGAGGATTAGATTAAAGAAT+TGG | - | chr1_2:71892872-71892891 | None:intergenic | 30.0% | |
| CATTCTCAACATTATTGTAC+CGG | + | chr1_2:71892908-71892927 | Msa0090060:CDS | 30.0% | |
| GTACCATGAAAGATAATATC+TGG | + | chr1_2:71892950-71892969 | Msa0090060:exon | 30.0% | |
| ! | TTTGAGTTTATTGTGGCGTT+TGG | - | chr1_2:71888869-71888888 | None:intergenic | 35.0% |
| ! | CAGAGAGTTTGAGTTTATTG+TGG | - | chr1_2:71888876-71888895 | None:intergenic | 35.0% |
| CGAATATTGGAATCAAAGGA+AGG | - | chr1_2:71888973-71888992 | None:intergenic | 35.0% | |
| ATTCGTCAATTCGTTTCATC+CGG | + | chr1_2:71888988-71889007 | Msa0090060:CDS | 35.0% | |
| GTTATGGTCAAGAGTGAATA+GGG | - | chr1_2:71889040-71889059 | None:intergenic | 35.0% | |
| TGTTATGGTCAAGAGTGAAT+AGG | - | chr1_2:71889041-71889060 | None:intergenic | 35.0% | |
| CAAAACAGAAAAGGCAATGA+TGG | - | chr1_2:71889127-71889146 | None:intergenic | 35.0% | |
| ! | TCATTGCCTTTTCTGTTTTG+AGG | + | chr1_2:71889127-71889146 | Msa0090060:CDS | 35.0% |
| !! | CATTGCCTTTTCTGTTTTGA+GGG | + | chr1_2:71889128-71889147 | Msa0090060:CDS | 35.0% |
| CAATACCCTCAAAACAGAAA+AGG | - | chr1_2:71889136-71889155 | None:intergenic | 35.0% | |
| AAACGCATCTACCTACAATA+AGG | + | chr1_2:71889191-71889210 | Msa0090060:CDS | 35.0% | |
| AACGCATCTACCTACAATAA+GGG | + | chr1_2:71889192-71889211 | Msa0090060:CDS | 35.0% | |
| TTCAAAGACCGCTTAATTGA+CGG | - | chr1_2:71889309-71889328 | None:intergenic | 35.0% | |
| TTAATAGTTGGCCACCATTT+GGG | - | chr1_2:71889375-71889394 | None:intergenic | 35.0% | |
| ATTAATAGTTGGCCACCATT+TGG | - | chr1_2:71889376-71889395 | None:intergenic | 35.0% | |
| !! | CATATCAAAAGCATTGGCAT+TGG | - | chr1_2:71889403-71889422 | None:intergenic | 35.0% |
| ! | CAATGCCAATGCTTTTGATA+TGG | + | chr1_2:71889401-71889420 | Msa0090060:CDS | 35.0% |
| ! | TAGGTCCATATCAAAAGCAT+TGG | - | chr1_2:71889409-71889428 | None:intergenic | 35.0% |
| CTGAACAAGATGAATACAAG+AGG | + | chr1_2:71889430-71889449 | Msa0090060:CDS | 35.0% | |
| ! | CTTTGATGTTGATTGAGTGA+AGG | + | chr1_2:71889568-71889587 | Msa0090060:intron | 35.0% |
| CATCTAAGAGAGTAAATTGG+AGG | - | chr1_2:71889622-71889641 | None:intergenic | 35.0% | |
| ACATGAGAGTTGAAAGTAAG+AGG | - | chr1_2:71889726-71889745 | None:intergenic | 35.0% | |
| ATTCTACTGTCGATAATTGC+TGG | - | chr1_2:71889905-71889924 | None:intergenic | 35.0% | |
| AGCAATTATCGACAGTAGAA+TGG | + | chr1_2:71889904-71889923 | Msa0090060:intron | 35.0% | |
| GAGTATAGTAAAGGACCAAA+GGG | - | chr1_2:71890090-71890109 | None:intergenic | 35.0% | |
| AGAGTATAGTAAAGGACCAA+AGG | - | chr1_2:71890091-71890110 | None:intergenic | 35.0% | |
| CGTCAATTATGCAGAAATTC+TGG | + | chr1_2:71890434-71890453 | Msa0090060:CDS | 35.0% | |
| CTGTTGAACCTACAACTATT+CGG | + | chr1_2:71890468-71890487 | Msa0090060:CDS | 35.0% | |
| TGTTGAACCTACAACTATTC+GGG | + | chr1_2:71890469-71890488 | Msa0090060:CDS | 35.0% | |
| ATTAACTGATGCTCGATACA+AGG | - | chr1_2:71890498-71890517 | None:intergenic | 35.0% | |
| TGAACTGAAGTAGAGTAAGT+TGG | - | chr1_2:71890655-71890674 | None:intergenic | 35.0% | |
| TTCAGTTCATATTAATGGCG+AGG | + | chr1_2:71890666-71890685 | Msa0090060:CDS | 35.0% | |
| ATTCTCAACAATTCCTTGCT+GGG | + | chr1_2:71890689-71890708 | Msa0090060:CDS | 35.0% | |
| ACAATCTAGTAGAAACCCAA+AGG | - | chr1_2:71890859-71890878 | None:intergenic | 35.0% | |
| ! | ATTTTCACTCGGAATACTGT+TGG | + | chr1_2:71890915-71890934 | Msa0090060:intron | 35.0% |
| GTAAGCTCTCTAAATTGATC+AGG | + | chr1_2:71891105-71891124 | Msa0090060:intron | 35.0% | |
| !! | TTATAGGCATTGGAAATGCA+AGG | + | chr1_2:71891265-71891284 | Msa0090060:intron | 35.0% |
| CAAAGATATGCCTTCTTCTA+CGG | + | chr1_2:71891317-71891336 | Msa0090060:CDS | 35.0% | |
| TATTCCTTACTCGGTATGAT+AGG | + | chr1_2:71891451-71891470 | Msa0090060:intron | 35.0% | |
| AAATCCTATCATACCGAGTA+AGG | - | chr1_2:71891458-71891477 | None:intergenic | 35.0% | |
| TTACTCGGTATGATAGGATT+TGG | + | chr1_2:71891457-71891476 | Msa0090060:intron | 35.0% | |
| ACCATTTATGTCAGTGTTCT+TGG | + | chr1_2:71891527-71891546 | Msa0090060:intron | 35.0% | |
| ACGAGTGAATTTACGTTTAC+CGG | - | chr1_2:71891617-71891636 | None:intergenic | 35.0% | |
| TGAGGAGTAAATACTTTCTG+GGG | + | chr1_2:71891661-71891680 | Msa0090060:intron | 35.0% | |
| ! | TTTCTGGGGAAATTTAGATG+AGG | + | chr1_2:71891675-71891694 | Msa0090060:intron | 35.0% |
| TAATGCTTATCTCTATGGAG+TGG | - | chr1_2:71891917-71891936 | None:intergenic | 35.0% | |
| !!! | AGATGTTGTTTTGGATGAGT+AGG | + | chr1_2:71891936-71891955 | Msa0090060:intron | 35.0% |
| AAGCACCTTATGTTTCTCTT+TGG | + | chr1_2:71892112-71892131 | Msa0090060:CDS | 35.0% | |
| AGTGCAAGATCTGCAAAATA+GGG | - | chr1_2:71892205-71892224 | None:intergenic | 35.0% | |
| TAGTGCAAGATCTGCAAAAT+AGG | - | chr1_2:71892206-71892225 | None:intergenic | 35.0% | |
| !!! | TTTTTCAGGAGGGTTAGTTA+CGG | - | chr1_2:71892365-71892384 | None:intergenic | 35.0% |
| CAATCTTGACGATTTAAGCA+TGG | - | chr1_2:71892455-71892474 | None:intergenic | 35.0% | |
| !! | ACTATGAAGTTCTGAATGAG+GGG | + | chr1_2:71892522-71892541 | Msa0090060:intron | 35.0% |
| GAATGCGTCTACACAAATAA+AGG | - | chr1_2:71892893-71892912 | None:intergenic | 35.0% | |
| !! | TATGTTGTCTTCAAGTTGAC+CGG | - | chr1_2:71892930-71892949 | None:intergenic | 35.0% |
| CAGCCAGATATTATCTTTCA+TGG | - | chr1_2:71892956-71892975 | None:intergenic | 35.0% | |
| !! | GTAATGGAGGCTTTGTTAGT+TGG | + | chr1_2:71888702-71888721 | Msa0090060:five_prime_UTR | 40.0% |
| GATAAGCATGGTTGTGGAAA+TGG | - | chr1_2:71888799-71888818 | None:intergenic | 40.0% | |
| GAAGATTGTGAGGTCTATGA+CGG | - | chr1_2:71888950-71888969 | None:intergenic | 40.0% | |
| TGAATAGGGTCTGTAAATCG+CGG | - | chr1_2:71889026-71889045 | None:intergenic | 40.0% | |
| TGAAGTTCCTATGAAGTGCA+AGG | - | chr1_2:71889094-71889113 | None:intergenic | 40.0% | |
| CTCAAAGGAAATTGCCCAAA+TGG | + | chr1_2:71889358-71889377 | Msa0090060:CDS | 40.0% | |
| AAAGGAAATTGCCCAAATGG+TGG | + | chr1_2:71889361-71889380 | Msa0090060:CDS | 40.0% | |
| ! | ATGGTCGGATATGTCTTTTG+CGG | - | chr1_2:71889930-71889949 | None:intergenic | 40.0% |
| GCTGTGGTAGAGTATAGTAA+AGG | - | chr1_2:71890099-71890118 | None:intergenic | 40.0% | |
| TATCTTCTATGCTGTAGCTG+TGG | - | chr1_2:71890115-71890134 | None:intergenic | 40.0% | |
| ! | CATAAAGATACTTGCTACCG+TGG | + | chr1_2:71890217-71890236 | Msa0090060:intron | 40.0% |
| !!! | TTGTTTTAGATGCTTGCAGC+AGG | + | chr1_2:71890519-71890538 | Msa0090060:CDS | 40.0% |
| GCTACCTAGCAGTAAAGAAA+GGG | - | chr1_2:71890573-71890592 | None:intergenic | 40.0% | |
| TGCTACCTAGCAGTAAAGAA+AGG | - | chr1_2:71890574-71890593 | None:intergenic | 40.0% | |
| GATTCTCAACAATTCCTTGC+TGG | + | chr1_2:71890688-71890707 | Msa0090060:CDS | 40.0% | |
| ! | CTCTTGTCTTTTGCAGACTT+GGG | + | chr1_2:71890786-71890805 | Msa0090060:CDS | 40.0% |
| CCTAGAAAAAGAGTAATCGG+AGG | - | chr1_2:71891184-71891203 | None:intergenic | 40.0% | |
| ! | CCTCCGATTACTCTTTTTCT+AGG | + | chr1_2:71891181-71891200 | Msa0090060:intron | 40.0% |
| GGCAAACATGTTGATGCTTT+AGG | + | chr1_2:71891286-71891305 | Msa0090060:CDS | 40.0% | |
| GAGGAAATATCCGTAGAAGA+AGG | - | chr1_2:71891330-71891349 | None:intergenic | 40.0% | |
| GCCAAGAACACTGACATAAA+TGG | - | chr1_2:71891531-71891550 | None:intergenic | 40.0% | |
| TTGAAATTTCGGGGAAGTGA+CGG | + | chr1_2:71891791-71891810 | Msa0090060:intron | 40.0% | |
| !! | TGTTTTGGATGAGTAGGTAG+AGG | + | chr1_2:71891942-71891961 | Msa0090060:intron | 40.0% |
| !! | GTTTTGGATGAGTAGGTAGA+GGG | + | chr1_2:71891943-71891962 | Msa0090060:intron | 40.0% |
| CTGAAATGGAGATGGTTAGT+CGG | + | chr1_2:71892056-71892075 | Msa0090060:CDS | 40.0% | |
| ! | TGAAATGGAGATGGTTAGTC+GGG | + | chr1_2:71892057-71892076 | Msa0090060:CDS | 40.0% |
| CTTTGGTAAAGTTTGCAGTG+AGG | + | chr1_2:71892129-71892148 | Msa0090060:CDS | 40.0% | |
| ! | ATCTGCAAAATAGGGTTAGC+AGG | - | chr1_2:71892197-71892216 | None:intergenic | 40.0% |
| GACAACTCACATGCAATCTT+TGG | - | chr1_2:71892801-71892820 | None:intergenic | 40.0% | |
| TGCGTCTACACAAATAAAGG+AGG | - | chr1_2:71892890-71892909 | None:intergenic | 40.0% | |
| ! | GTTTATTGTGGCGTTTGGTG+CGG | - | chr1_2:71888864-71888883 | None:intergenic | 45.0% |
| !! | TGATGGTGGTGGTAGTAGTA+GGG | - | chr1_2:71888900-71888919 | None:intergenic | 45.0% |
| TTCGAGCTTGTGTTCAGAGA+AGG | - | chr1_2:71888926-71888945 | None:intergenic | 45.0% | |
| CAAAGGAAGGGAAGATTGTG+AGG | - | chr1_2:71888960-71888979 | None:intergenic | 45.0% | |
| ATTCGTTTCATCCGGCAAAG+AGG | + | chr1_2:71888996-71889015 | Msa0090060:CDS | 45.0% | |
| AGTTCCTATGAAGTGCAAGG+TGG | - | chr1_2:71889091-71889110 | None:intergenic | 45.0% | |
| ! | TGGTTTCTAGGTTTGCGTCA+TGG | + | chr1_2:71889163-71889182 | Msa0090060:CDS | 45.0% |
| TTATTATGGTGCGGAGAGAC+AGG | + | chr1_2:71889217-71889236 | Msa0090060:CDS | 45.0% | |
| GAGATATCTTTCACGCCCTT+TGG | + | chr1_2:71890072-71890091 | Msa0090060:intron | 45.0% | |
| CTATGCAGTTGCACTAACTC+AGG | - | chr1_2:71890150-71890169 | None:intergenic | 45.0% | |
| AAGGAGTCCCGAATAGTTGT+AGG | - | chr1_2:71890479-71890498 | None:intergenic | 45.0% | |
| GTGTCCCTTTCTTTACTGCT+AGG | + | chr1_2:71890566-71890585 | Msa0090060:intron | 45.0% | |
| ! | TGTTTTCAGCAAACCCAGCA+AGG | - | chr1_2:71890705-71890724 | None:intergenic | 45.0% |
| !! | GCTGGGTTTGCTGAAAACAT+TGG | + | chr1_2:71890706-71890725 | Msa0090060:CDS | 45.0% |
| ! | TTGCGGCACGAACATTTTCA+AGG | - | chr1_2:71890732-71890751 | None:intergenic | 45.0% |
| AGCTGCAGACACAATTGTTG+CGG | - | chr1_2:71890749-71890768 | None:intergenic | 45.0% | |
| ! | GCTCTTGTCTTTTGCAGACT+TGG | + | chr1_2:71890785-71890804 | Msa0090060:CDS | 45.0% |
| ATTTCCTCCCGAGGAATCTT+CGG | + | chr1_2:71891342-71891361 | Msa0090060:CDS | 45.0% | |
| CGACTAACCATCTCCATTTC+AGG | - | chr1_2:71892058-71892077 | None:intergenic | 45.0% | |
| ! | GAAATGGAGATGGTTAGTCG+GGG | + | chr1_2:71892058-71892077 | Msa0090060:CDS | 45.0% |
| TGCAAGAGAAGCTCTTGGTT+TGG | + | chr1_2:71892165-71892184 | Msa0090060:CDS | 45.0% | |
| GCGACGTACAAAGGAAGAAG+CGG | - | chr1_2:71888833-71888852 | None:intergenic | 50.0% | |
| !! | GTGATGGTGGTGGTAGTAGT+AGG | - | chr1_2:71888901-71888920 | None:intergenic | 50.0% |
| !! | TTCAGAGAAGGTGGTGATGG+TGG | - | chr1_2:71888914-71888933 | None:intergenic | 50.0% |
| GTGTTCAGAGAAGGTGGTGA+TGG | - | chr1_2:71888917-71888936 | None:intergenic | 50.0% | |
| GAGCTTGTGTTCAGAGAAGG+TGG | - | chr1_2:71888923-71888942 | None:intergenic | 50.0% | |
| CCTATGAAGTGCAAGGTGGA+AGG | - | chr1_2:71889087-71889106 | None:intergenic | 50.0% | |
| CCTTCCACCTTGCACTTCAT+AGG | + | chr1_2:71889084-71889103 | Msa0090060:CDS | 50.0% | |
| GGTGGAAAAGAGGTGGTTGT+TGG | + | chr1_2:71889246-71889265 | Msa0090060:CDS | 50.0% | |
| GATGCTTACAGACTCGTTCG+AGG | + | chr1_2:71889453-71889472 | Msa0090060:CDS | 50.0% | |
| AAAGAAAGGGACACAGACGC+AGG | - | chr1_2:71890560-71890579 | None:intergenic | 50.0% | |
| ! | CAAAAGACAAGAGCGTGTGC+GGG | - | chr1_2:71890779-71890798 | None:intergenic | 50.0% |
| ! | GCAAAAGACAAGAGCGTGTG+CGG | - | chr1_2:71890780-71890799 | None:intergenic | 50.0% |
| TCTACGGATATTTCCTCCCG+AGG | + | chr1_2:71891333-71891352 | Msa0090060:CDS | 50.0% | |
| GAACAGACCGAAGATTCCTC+GGG | - | chr1_2:71891352-71891371 | None:intergenic | 50.0% | |
| GGAACAGACCGAAGATTCCT+CGG | - | chr1_2:71891353-71891372 | None:intergenic | 50.0% | |
| TGTCTCCTTGCAGCCTGAAA+TGG | + | chr1_2:71892042-71892061 | Msa0090060:intron | 50.0% | |
| CATCTCCATTTCAGGCTGCA+AGG | - | chr1_2:71892050-71892069 | None:intergenic | 50.0% | |
| CTTGCAGCCTGAAATGGAGA+TGG | + | chr1_2:71892048-71892067 | Msa0090060:intron | 50.0% | |
| GTTTGCAGTGAGGACAGTCA+CGG | + | chr1_2:71892139-71892158 | Msa0090060:CDS | 50.0% | |
| TTTGCAGTGAGGACAGTCAC+GGG | + | chr1_2:71892140-71892159 | Msa0090060:CDS | 50.0% | |
| GGGATTGCAAGAGAAGCTCT+TGG | + | chr1_2:71892160-71892179 | Msa0090060:CDS | 50.0% | |
| AGGCGGGATAAGCATGGTTG+TGG | - | chr1_2:71888805-71888824 | None:intergenic | 55.0% | |
| CAAAGGAAGAAGCGGAGACG+AGG | - | chr1_2:71888825-71888844 | None:intergenic | 55.0% | |
| !! | TATTGTGGCGTTTGGTGCGG+CGG | - | chr1_2:71888861-71888880 | None:intergenic | 55.0% |
| !! | AGAGAAGGTGGTGATGGTGG+TGG | - | chr1_2:71888911-71888930 | None:intergenic | 55.0% |
| ATCGCGGTATGCCTCTTTGC+CGG | - | chr1_2:71889010-71889029 | None:intergenic | 55.0% | |
| CAGGAGTCTCGGTGGAAAAG+AGG | + | chr1_2:71889236-71889255 | Msa0090060:CDS | 55.0% | |
| GAGTCTCGGTGGAAAAGAGG+TGG | + | chr1_2:71889239-71889258 | Msa0090060:CDS | 55.0% | |
| !! | AGGTGGTGGTGCTGTGAATG+GGG | - | chr1_2:71889281-71889300 | None:intergenic | 55.0% |
| !! | GAGGTGGTGGTGCTGTGAAT+GGG | - | chr1_2:71889282-71889301 | None:intergenic | 55.0% |
| !! | AGAGGTGGTGGTGCTGTGAA+TGG | - | chr1_2:71889283-71889302 | None:intergenic | 55.0% |
| CTTAATTGACGGCGCAGAGG+TGG | - | chr1_2:71889298-71889317 | None:intergenic | 55.0% | |
| CCTCTGCGCCGTCAATTAAG+CGG | + | chr1_2:71889298-71889317 | Msa0090060:CDS | 55.0% | |
| GCAGTTGCACTAACTCAGGC+AGG | - | chr1_2:71890146-71890165 | None:intergenic | 55.0% | |
| GAGACGAGGCGGGATAAGCA+TGG | - | chr1_2:71888811-71888830 | None:intergenic | 60.0% | |
| AGGAAGAAGCGGAGACGAGG+CGG | - | chr1_2:71888822-71888841 | None:intergenic | 60.0% | |
| GTGCGGAGAGACAGGAGTCT+CGG | + | chr1_2:71889225-71889244 | Msa0090060:CDS | 60.0% | |
| !! | GTGGTGGTGCTGTGAATGGG+GGG | - | chr1_2:71889279-71889298 | None:intergenic | 60.0% |
| !! | GGTGGTGGTGCTGTGAATGG+GGG | - | chr1_2:71889280-71889299 | None:intergenic | 60.0% |
| AATTGACGGCGCAGAGGTGG+TGG | - | chr1_2:71889295-71889314 | None:intergenic | 60.0% | |
| CCGCTTAATTGACGGCGCAG+AGG | - | chr1_2:71889301-71889320 | None:intergenic | 60.0% | |
| CAGACCGAAGATTCCTCGGG+AGG | - | chr1_2:71891349-71891368 | None:intergenic | 60.0% | |
| GGAAGAAGCGGAGACGAGGC+GGG | - | chr1_2:71888821-71888840 | None:intergenic | 65.0% | |
| GCGGCGACTGCGACGTACAA+AGG | - | chr1_2:71888842-71888861 | None:intergenic | 65.0% | |
| CGGAGAGACAGGAGTCTCGG+TGG | + | chr1_2:71889228-71889247 | Msa0090060:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 71888702 | 71893103 | 71888702 | ID=Msa0090060;Name=Msa0090060 |
| chr1_2 | mRNA | 71888702 | 71893103 | 71888702 | ID=Msa0090060-mRNA-1;Parent=Msa0090060;Name=Msa0090060-mRNA-1;_AED=0.06;_eAED=0.06;_QI=70|1|1|1|1|1|7|145|435 |
| chr1_2 | exon | 71888702 | 71889474 | 71888702 | ID=Msa0090060-mRNA-1:exon:24899;Parent=Msa0090060-mRNA-1 |
| chr1_2 | exon | 71889906 | 71889961 | 71889906 | ID=Msa0090060-mRNA-1:exon:24900;Parent=Msa0090060-mRNA-1 |
| chr1_2 | exon | 71890431 | 71890540 | 71890431 | ID=Msa0090060-mRNA-1:exon:24901;Parent=Msa0090060-mRNA-1 |
| chr1_2 | exon | 71890648 | 71890807 | 71890648 | ID=Msa0090060-mRNA-1:exon:24902;Parent=Msa0090060-mRNA-1 |
| chr1_2 | exon | 71891271 | 71891363 | 71891271 | ID=Msa0090060-mRNA-1:exon:24903;Parent=Msa0090060-mRNA-1 |
| chr1_2 | exon | 71892055 | 71892186 | 71892055 | ID=Msa0090060-mRNA-1:exon:24904;Parent=Msa0090060-mRNA-1 |
| chr1_2 | exon | 71892905 | 71893103 | 71892905 | ID=Msa0090060-mRNA-1:exon:24905;Parent=Msa0090060-mRNA-1 |
| chr1_2 | five_prime_UTR | 71888702 | 71888771 | 71888702 | ID=Msa0090060-mRNA-1:five_prime_utr;Parent=Msa0090060-mRNA-1 |
| chr1_2 | CDS | 71888772 | 71889474 | 71888772 | ID=Msa0090060-mRNA-1:cds;Parent=Msa0090060-mRNA-1 |
| chr1_2 | CDS | 71889906 | 71889961 | 71889906 | ID=Msa0090060-mRNA-1:cds;Parent=Msa0090060-mRNA-1 |
| chr1_2 | CDS | 71890431 | 71890540 | 71890431 | ID=Msa0090060-mRNA-1:cds;Parent=Msa0090060-mRNA-1 |
| chr1_2 | CDS | 71890648 | 71890807 | 71890648 | ID=Msa0090060-mRNA-1:cds;Parent=Msa0090060-mRNA-1 |
| chr1_2 | CDS | 71891271 | 71891363 | 71891271 | ID=Msa0090060-mRNA-1:cds;Parent=Msa0090060-mRNA-1 |
| chr1_2 | CDS | 71892055 | 71892186 | 71892055 | ID=Msa0090060-mRNA-1:cds;Parent=Msa0090060-mRNA-1 |
| chr1_2 | CDS | 71892905 | 71892958 | 71892905 | ID=Msa0090060-mRNA-1:cds;Parent=Msa0090060-mRNA-1 |
| chr1_2 | three_prime_UTR | 71892959 | 71893103 | 71892959 | ID=Msa0090060-mRNA-1:three_prime_utr;Parent=Msa0090060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
