AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0265600

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0265600 MtrunA17_Chr2g0330411 99.647 283 1 0 1 283 1 283 0.0 575
Msa0265600 MtrunA17_Chr2g0308551 36.842 285 138 5 13 255 1 285 7.76e-49 164
Msa0265600 MtrunA17_Chr7g0221311 36.859 312 162 9 1 281 1 308 4.14e-47 162
Msa0265600 MtrunA17_Chr4g0073281 35.065 231 149 1 32 262 1 230 1.15e-40 142
Msa0265600 MtrunA17_Chr5g0431341 31.224 237 152 5 44 270 37 272 1.97e-35 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0265600 AT1G55170.1 51.049 286 132 4 1 282 1 282 1.77e-86 260
Msa0265600 AT3G14750.1 38.696 230 131 3 37 257 63 291 1.73e-46 159
Msa0265600 AT1G67170.2 38.647 207 127 0 33 239 47 253 5.67e-42 148
Msa0265600 AT1G67170.1 38.647 207 127 0 33 239 47 253 5.67e-42 148
Msa0265600 AT2G30120.5 26.957 230 154 1 42 257 37 266 2.59e-21 91.7
Msa0265600 AT2G30120.4 26.754 228 153 1 42 255 37 264 6.04e-21 90.1
Msa0265600 AT2G30120.2 26.638 229 154 1 41 255 36 264 6.70e-21 90.5
Msa0265600 AT5G61920.3 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0265600 AT5G61920.5 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0265600 AT5G61920.2 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0265600 AT5G61920.6 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0265600 AT5G61920.1 28.351 194 139 0 28 221 37 230 1.56e-18 82.8
Msa0265600 AT5G61920.4 28.902 173 123 0 49 221 17 189 1.55e-16 76.6
Msa0265600 AT2G30120.3 27.972 143 103 0 39 181 34 176 1.13e-11 62.8
Msa0265600 AT2G30120.1 27.972 143 103 0 39 181 34 176 1.64e-11 62.0
Msa0265600 AT2G30120.6 27.972 143 103 0 39 181 34 176 1.64e-11 62.0

Find 163 sgRNAs with CRISPR-Local

Find 520 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCTTCAATTTCTAATT+AGG 0.149861 2_2:+65955850 Msa0265600:five_prime_UTR
CTACACTTTGTAATAAATTA+TGG 0.161788 2_2:-65962259 None:intergenic
GCAGAGAAAGGTCCTCTTTA+TGG 0.176094 2_2:+65957970 Msa0265600:CDS
TTGCCTTATGGAACAAATTT+TGG 0.192469 2_2:+65957801 Msa0265600:CDS
CGAAATGTTTCAACGTGTTT+TGG 0.209278 2_2:+65962127 Msa0265600:three_prime_UTR
CGCAAAATCTCGCAGCATTA+TGG 0.232507 2_2:-65961524 None:intergenic
AAACCGGGTGAAATGTATTA+TGG 0.235292 2_2:+65961582 Msa0265600:three_prime_UTR
ATTCATGCAGGTTTGCCTTA+TGG 0.235597 2_2:+65957789 Msa0265600:intron
AAACTATATGCATGATTAAA+TGG 0.243539 2_2:-65962338 None:intergenic
ATGGGGTGGGTACTGCTTCT+AGG 0.246552 2_2:+65957989 Msa0265600:CDS
CACTTACGAAAGATGTTTCT+AGG 0.253529 2_2:+65956727 Msa0265600:CDS
AGTATCAAACAAGAACTTTC+TGG 0.261139 2_2:+65956693 Msa0265600:CDS
AAAATTAAGCCACTAGGATT+TGG 0.264537 2_2:+65962413 Msa0265600:three_prime_UTR
AGTTTCTTGCACGCTCTATT+TGG 0.269956 2_2:+65962093 Msa0265600:three_prime_UTR
CAAAACACGTTGAAACATTT+CGG 0.287707 2_2:-65962126 None:intergenic
CTCTATGAAGTTCGGATTAT+AGG 0.291892 2_2:-65962182 None:intergenic
TAAAAGCTCTTTGAGTTATA+CGG 0.292488 2_2:-65955741 None:intergenic
TTGAGTTATACGGCGTCGTT+TGG 0.293424 2_2:-65955731 None:intergenic
TTGGAAATGAAAGCTTTAAA+AGG 0.310780 2_2:+65961707 Msa0265600:three_prime_UTR
TACACTTTGTAATAAATTAT+GGG 0.316188 2_2:-65962258 None:intergenic
CACGAAGTTTCTCAACTTCT+CGG 0.317894 2_2:-65957024 None:intergenic
ACCTAGCGCGCATCAGTTCT+TGG 0.323755 2_2:-65956806 None:intergenic
GAGATAAAAGACCATTAAAA+TGG 0.326020 2_2:-65958137 None:intergenic
ACCTCATCCAGCATTGTTAG+AGG 0.338446 2_2:+65956398 Msa0265600:CDS
CCTCCATATGCAGATGGATA+TGG 0.340583 2_2:+65957846 Msa0265600:CDS
TCTTCCTACTCGCGTCTAAA+TGG 0.346507 2_2:-65962304 None:intergenic
CAGAGAAAGGTCCTCTTTAT+GGG 0.349670 2_2:+65957971 Msa0265600:CDS
ATTAGTTGAAAATGCAAAAC+CGG 0.350376 2_2:+65961566 Msa0265600:three_prime_UTR
TCAATGAGATCTGAGATTGA+TGG 0.370744 2_2:+65956777 Msa0265600:CDS
CAATCTAAAATTTGGAAATC+AGG 0.374042 2_2:-65961982 None:intergenic
GGAGGCTGGTGGCGGATAAC+AGG 0.382841 2_2:+65956451 Msa0265600:CDS
GCATTTGACATTTGAGTAGA+TGG 0.387169 2_2:+65962049 Msa0265600:three_prime_UTR
CTTCCGATGGATACCCTCTT+CGG 0.387777 2_2:-65956329 None:intergenic
CCCGCACGCTCTATGAAGTT+CGG 0.395759 2_2:-65962190 None:intergenic
GAAGGCAAACATGGAGTTCA+TGG 0.395776 2_2:+65956961 Msa0265600:CDS
AGAGCGTGCAAGAAACTCAT+AGG 0.399746 2_2:-65962087 None:intergenic
TTCAATTGGGTTGTCCTCCT+TGG 0.404053 2_2:+65961857 Msa0265600:three_prime_UTR
ACACTACAAAACTAATTGTA+TGG 0.405882 2_2:+65962480 Msa0265600:three_prime_UTR
TGAGTTATACGGCGTCGTTT+GGG 0.409841 2_2:-65955730 None:intergenic
CTACCAAAATTTGTTCCATA+AGG 0.410355 2_2:-65957804 None:intergenic
AACCGGGTGAAATGTATTAT+GGG 0.424403 2_2:+65961583 Msa0265600:three_prime_UTR
TGAAGTTGGAGTCTGATCTT+AGG 0.426762 2_2:+65956610 Msa0265600:CDS
GGTGGTGGCCCGCGAGCATA+AGG 0.435456 2_2:-65956354 None:intergenic
TAGCATGGATGGAAGACATT+GGG 0.438242 2_2:+65957057 Msa0265600:CDS
TTTCTCAACTTCTCGGGCCA+TGG 0.443621 2_2:-65957017 None:intergenic
TTCCGATGGATACCCTCTTC+GGG 0.447941 2_2:-65956328 None:intergenic
AAACATCTTTCGTAAGTGTC+TGG 0.450505 2_2:-65956722 None:intergenic
CCGATGGTTTAATTGTGCTT+TGG 0.457270 2_2:+65961949 Msa0265600:three_prime_UTR
GTTTAGGCTGCTGCAGAGAA+AGG 0.464656 2_2:+65957958 Msa0265600:intron
GATGGAAGACATTGGGGAGC+TGG 0.465511 2_2:+65957064 Msa0265600:CDS
GTATCAAACAAGAACTTTCT+GGG 0.473347 2_2:+65956694 Msa0265600:CDS
TCAATCTCAGATCTCATTGA+AGG 0.475047 2_2:-65956774 None:intergenic
CTTACTATATGCTTTCAGCT+TGG 0.475286 2_2:+65961883 Msa0265600:three_prime_UTR
AGAGCGTGCGGGAAACTCAT+AGG 0.475766 2_2:+65962201 Msa0265600:three_prime_UTR
AATGAAAGCTTTAAAAGGTA+TGG 0.476327 2_2:+65961712 Msa0265600:three_prime_UTR
GCTGAGGGCAAGTAGGGCAC+AGG 0.477124 2_2:+65961605 Msa0265600:three_prime_UTR
GATAGTATGCATGAGGTCCT+AGG 0.482561 2_2:+65962435 Msa0265600:three_prime_UTR
ACGAAGTTTCTCAACTTCTC+GGG 0.483936 2_2:-65957023 None:intergenic
TACTTCGCTAACACAGCTAA+AGG 0.487483 2_2:-65958090 None:intergenic
AGCTCTTCCTCTAACAATGC+TGG 0.487736 2_2:-65956405 None:intergenic
AATGCACAAGCCCAACTAAA+GGG 0.494054 2_2:-65962031 None:intergenic
ACACCATATCCATCTGCATA+TGG 0.495250 2_2:-65957849 None:intergenic
AGCTTTCATTTCCAATCTCA+CGG 0.498392 2_2:-65961699 None:intergenic
AAATGCACAAGCCCAACTAA+AGG 0.500360 2_2:-65962032 None:intergenic
GCGAGACCTTGCAGCTGCGA+AGG 0.508426 2_2:+65956503 Msa0265600:CDS
TATGGTGGATTATGAAAAGA+AGG 0.509898 2_2:+65956943 Msa0265600:CDS
TACCCTCTTCGGGAACTCAT+TGG 0.513298 2_2:-65956318 None:intergenic
AAGAAGAGGGTCGCGTACGA+TGG 0.513958 2_2:-65955792 None:intergenic
ACTTCGCTAACACAGCTAAA+GGG 0.514081 2_2:-65958089 None:intergenic
TCCTCTAACAATGCTGGATG+AGG 0.514770 2_2:-65956399 None:intergenic
TATAGGGTATGTATGCCGTT+CGG 0.515712 2_2:+65962157 Msa0265600:three_prime_UTR
CTCGCAGCATTATGGTGTGT+GGG 0.516947 2_2:-65961516 None:intergenic
TGCTGTCGTGGCATTGGTGG+TGG 0.516987 2_2:-65956369 None:intergenic
TATCCATCTGCATATGGAGG+TGG 0.517988 2_2:-65957843 None:intergenic
CAAGCTGAAAGCATATAGTA+AGG 0.520368 2_2:-65961882 None:intergenic
GCTGAGCTTGCTAGCATGGA+TGG 0.521001 2_2:+65957046 Msa0265600:CDS
TCGTGCTGAGCTTGCTAGCA+TGG 0.521988 2_2:+65957042 Msa0265600:CDS
CTGAACATGAGATGCATTCG+AGG 0.524074 2_2:+65956568 Msa0265600:CDS
CATCGTATGAATTTAGCGAT+TGG 0.524610 2_2:+65956534 Msa0265600:CDS
GTGTTATCTTGATCCATCAC+AGG 0.526559 2_2:-65961640 None:intergenic
GCAGTACCCACCCCATAAAG+AGG 0.528840 2_2:-65957982 None:intergenic
AGACCTTGCAGCTGCGAAGG+AGG 0.529458 2_2:+65956506 Msa0265600:CDS
CATGGAACAGAGGCAGTCAA+TGG 0.533149 2_2:+65956979 Msa0265600:CDS
GAAAGCTTTAAAAGGTATGG+TGG 0.533811 2_2:+65961715 Msa0265600:three_prime_UTR
TATGGTTGCAGATGGAGAGC+TGG 0.534739 2_2:+65961458 Msa0265600:intron
TGTATAACTTCATTCTTCAA+CGG 0.535567 2_2:-65956642 None:intergenic
GTGAAATGTATTATGGGCTG+AGG 0.545481 2_2:+65961589 Msa0265600:three_prime_UTR
CGTGCGGGAAACTCATAGGT+TGG 0.548592 2_2:+65962205 Msa0265600:three_prime_UTR
GGAATATGCTGTCGTGGCAT+TGG 0.548596 2_2:-65956375 None:intergenic
TCTAACAATGCTGGATGAGG+TGG 0.550555 2_2:-65956396 None:intergenic
CCTCTTCGGGAACTCATTGG+TGG 0.551456 2_2:-65956315 None:intergenic
TTATGGGCTGAGGGCAAGTA+GGG 0.551600 2_2:+65961599 Msa0265600:three_prime_UTR
TGATGAAAGAGTTTATCAGC+AGG 0.553082 2_2:+65961907 Msa0265600:three_prime_UTR
TAGGAAATGTACCTACTGAT+GGG 0.553548 2_2:+65962279 Msa0265600:three_prime_UTR
AACACAGCTAAAGGGATGGC+AGG 0.555700 2_2:-65958081 None:intergenic
TATCAAAACACAACAAAGGC+AGG 0.556096 2_2:-65961670 None:intergenic
CTAGCATGGATGGAAGACAT+TGG 0.560779 2_2:+65957056 Msa0265600:CDS
AGCCCATAATACATTTCACC+CGG 0.563030 2_2:-65961585 None:intergenic
TCGGAAGGTCCTTATGCTCG+CGG 0.566608 2_2:+65956345 Msa0265600:CDS
TCAACTAATGAAGAACATCT+CGG 0.568018 2_2:-65961552 None:intergenic
ACCAAGAACTGATGCGCGCT+AGG 0.570107 2_2:+65956805 Msa0265600:CDS
CTGAGGGCAAGTAGGGCACA+GGG 0.571813 2_2:+65961606 Msa0265600:three_prime_UTR
GGAGGTAACGACTTCAACCT+AGG 0.571856 2_2:-65962452 None:intergenic
TTATGAAAAGAAGGCAAACA+TGG 0.573229 2_2:+65956952 Msa0265600:CDS
GCTCCTCCTTCGCAGCTGCA+AGG 0.574836 2_2:-65956509 None:intergenic
ATTATGGGCTGAGGGCAAGT+AGG 0.575314 2_2:+65961598 Msa0265600:three_prime_UTR
GTAGGAAATGTACCTACTGA+TGG 0.577220 2_2:+65962278 Msa0265600:three_prime_UTR
ATTCAACGACGGTTTGAGCG+AGG 0.579107 2_2:-65958027 None:intergenic
AAAGGTCCTCTTTATGGGGT+GGG 0.581180 2_2:+65957976 Msa0265600:CDS
TGAATCTAAGTGATTGATGT+TGG 0.581375 2_2:+65958045 Msa0265600:exon
TCTCGCAGCATTATGGTGTG+TGG 0.585323 2_2:-65961517 None:intergenic
CGCTAACACAGCTAAAGGGA+TGG 0.585429 2_2:-65958085 None:intergenic
GAAAGGTCCTCTTTATGGGG+TGG 0.586390 2_2:+65957975 Msa0265600:CDS
ATATGCTGTCGTGGCATTGG+TGG 0.591214 2_2:-65956372 None:intergenic
ACAGGAGGTTGATTGATGAT+CGG 0.594043 2_2:+65956469 Msa0265600:CDS
TTCCCACCTCCATATGCAGA+TGG 0.594536 2_2:+65957840 Msa0265600:CDS
ATCCATCTGCATATGGAGGT+GGG 0.596363 2_2:-65957842 None:intergenic
CGGAAGGTCCTTATGCTCGC+GGG 0.597736 2_2:+65956346 Msa0265600:CDS
TCCGAACTTCATAGAGCGTG+CGG 0.599188 2_2:+65962189 Msa0265600:three_prime_UTR
CAAACAAGAACTTTCTGGGA+AGG 0.599275 2_2:+65956698 Msa0265600:CDS
TAGCTGTGTTAGCGAAGTAG+CGG 0.599283 2_2:+65958094 Msa0265600:three_prime_UTR
TTGATGTTGGTGATGAAGAA+AGG 0.600863 2_2:+65958058 Msa0265600:three_prime_UTR
TGAAATGAGGAGGCTGGTGG+CGG 0.604523 2_2:+65956443 Msa0265600:CDS
GCATGCTGAAATGAGGAGGC+TGG 0.605896 2_2:+65956437 Msa0265600:CDS
GGCTGGTGGCGGATAACAGG+AGG 0.608308 2_2:+65956454 Msa0265600:CDS
GAGCGTGCAAGAAACTCATA+GGG 0.610837 2_2:-65962086 None:intergenic
CCAAAGCACAATTAAACCAT+CGG 0.612942 2_2:-65961949 None:intergenic
TTAGTTGAAAATGCAAAACC+GGG 0.613401 2_2:+65961567 Msa0265600:three_prime_UTR
CATAATTTATTACAAAGTGT+AGG 0.614382 2_2:+65962260 Msa0265600:three_prime_UTR
CACCAATGAGTTCCCGAAGA+GGG 0.614590 2_2:+65956316 Msa0265600:CDS
CGTGCAAGAAACTCATAGGG+TGG 0.615760 2_2:-65962083 None:intergenic
CGAGCATAAGGACCTTCCGA+TGG 0.617038 2_2:-65956342 None:intergenic
GGGGCCATTTAGACGCGAGT+AGG 0.619983 2_2:+65962300 Msa0265600:three_prime_UTR
CGAAGAGGGTATCCATCGGA+AGG 0.623087 2_2:+65956330 Msa0265600:CDS
CCGAACTTCATAGAGCGTGC+GGG 0.626111 2_2:+65962190 Msa0265600:three_prime_UTR
AAGTGCAGCATGCTGAAATG+AGG 0.630681 2_2:+65956430 Msa0265600:CDS
GTGCAAGAAACTCATAGGGT+GGG 0.634316 2_2:-65962082 None:intergenic
AGGAAATGTACCTACTGATG+GGG 0.638320 2_2:+65962280 Msa0265600:three_prime_UTR
TGAAATGTATTATGGGCTGA+GGG 0.638805 2_2:+65961590 Msa0265600:three_prime_UTR
TTCCCGAAGAGGGTATCCAT+CGG 0.640372 2_2:+65956326 Msa0265600:CDS
AAAATATCAAAACACAACAA+AGG 0.643607 2_2:-65961674 None:intergenic
TGTTATCTTGATCCATCACA+GGG 0.644177 2_2:-65961639 None:intergenic
TCGCAGCATTATGGTGTGTG+GGG 0.649104 2_2:-65961515 None:intergenic
GGATTTGGATAGTATGCATG+AGG 0.650640 2_2:+65962428 Msa0265600:three_prime_UTR
AGCATGGATGGAAGACATTG+GGG 0.653311 2_2:+65957058 Msa0265600:CDS
TGAGGTGGAATATGCTGTCG+TGG 0.657020 2_2:-65956381 None:intergenic
CCATATCCATCTGCATATGG+AGG 0.657742 2_2:-65957846 None:intergenic
GGAAATGTACCTACTGATGG+GGG 0.669640 2_2:+65962281 Msa0265600:three_prime_UTR
GATGAAAGAGTTTATCAGCA+GGG 0.669777 2_2:+65961908 Msa0265600:three_prime_UTR
GCATACTATCCAAATCCTAG+TGG 0.669807 2_2:-65962422 None:intergenic
TGCTGAAATGAGGAGGCTGG+TGG 0.673111 2_2:+65956440 Msa0265600:CDS
TGAACATGAGATGCATTCGA+GGG 0.676175 2_2:+65956569 Msa0265600:CDS
AGAGAAAGGTCCTCTTTATG+GGG 0.677550 2_2:+65957972 Msa0265600:CDS
TGCAGCATGCTGAAATGAGG+AGG 0.680683 2_2:+65956433 Msa0265600:CDS
CAATCACTTAGATTCAACGA+CGG 0.682596 2_2:-65958038 None:intergenic
TTGGTGGCTCTCTATGAACA+CGG 0.684269 2_2:-65956299 None:intergenic
ACATGGAGTTCATGGAACAG+AGG 0.685058 2_2:+65956969 Msa0265600:CDS
CCACCAATGAGTTCCCGAAG+AGG 0.693852 2_2:+65956315 Msa0265600:CDS
AGATGGATATGGTGTTCACA+TGG 0.705947 2_2:+65957857 Msa0265600:CDS
TTCGGATTATAGGATCCGAA+CGG 0.708886 2_2:-65962172 None:intergenic
AAGCATATAGTAAGGCACCA+AGG 0.723002 2_2:-65961874 None:intergenic
GAAAGAGTTTATCAGCAGGG+CGG 0.743630 2_2:+65961911 Msa0265600:three_prime_UTR
CATATAGTAAGGCACCAAGG+AGG 0.769093 2_2:-65961871 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATACTGTTAATTTTAAAT+TGG + chr2_2:65958176-65958195 Msa0265600:intron 10.0%
!! TTAAAAGCTTAAAAAAAATT+TGG + chr2_2:65959436-65959455 Msa0265600:intron 10.0%
!!! ATTTTTGTTTTATAGAACTA+TGG + chr2_2:65956925-65956944 Msa0265600:intron 15.0%
!! TTAATAAAAGACATGAAAAA+CGG + chr2_2:65957242-65957261 Msa0265600:intron 15.0%
!! AAAACAAGAAATATTATCAA+TGG - chr2_2:65958311-65958330 None:intergenic 15.0%
!!! TGTTTAGTTATTATTTGTTT+TGG + chr2_2:65958352-65958371 Msa0265600:intron 15.0%
!!! GTTTAGTTATTATTTGTTTT+GGG + chr2_2:65958353-65958372 Msa0265600:intron 15.0%
!!! TTTAGTTATTATTTGTTTTG+GGG + chr2_2:65958354-65958373 Msa0265600:intron 15.0%
!!! AAACTTTAAAGCTTAATTTA+TGG + chr2_2:65958682-65958701 Msa0265600:intron 15.0%
!! ATTAAAAGCTTAAAATTGTT+TGG + chr2_2:65959380-65959399 Msa0265600:intron 15.0%
!! TGTATAACAATAGTATTTAA+GGG + chr2_2:65959619-65959638 Msa0265600:intron 15.0%
!! ATAAAAAATGAGAAACTTTA+TGG - chr2_2:65959748-65959767 None:intergenic 15.0%
!! AATCTATTATATTTATGGAT+GGG + chr2_2:65959997-65960016 Msa0265600:intron 15.0%
!!! AATTAGTTTCGTATTAATAT+GGG - chr2_2:65960290-65960309 None:intergenic 15.0%
!!! TAATTAGTTTCGTATTAATA+TGG - chr2_2:65960291-65960310 None:intergenic 15.0%
!! TATAATAATAACAACAGATA+TGG - chr2_2:65960617-65960636 None:intergenic 15.0%
!!! ATATCTGTTGTTATTATTAT+AGG + chr2_2:65960616-65960635 Msa0265600:intron 15.0%
!! ATAATAATAGATACAAAGTT+AGG - chr2_2:65961441-65961460 None:intergenic 15.0%
!! TAACTTTGTATCTATTATTA+TGG + chr2_2:65961440-65961459 Msa0265600:intron 15.0%
!! TACACTTTGTAATAAATTAT+GGG - chr2_2:65962261-65962280 None:intergenic 15.0%
!! ATTCTCTTCAATTTCTAATT+AGG + chr2_2:65955850-65955869 Msa0265600:five_prime_UTR 20.0%
!!! TTTCACGTGTTTATATTTTT+TGG + chr2_2:65955920-65955939 Msa0265600:intron 20.0%
!!! TTCACGTGTTTATATTTTTT+GGG + chr2_2:65955921-65955940 Msa0265600:intron 20.0%
!! TTTGTACTAATGGAAATAAA+AGG - chr2_2:65956073-65956092 None:intergenic 20.0%
!!! TGTTGATAAAAATATGAAGT+TGG + chr2_2:65956596-65956615 Msa0265600:CDS 20.0%
!! AATGAAATGACATGAATAAT+AGG + chr2_2:65957211-65957230 Msa0265600:intron 20.0%
!!! TTTTGTGTATTATGTGATTA+CGG - chr2_2:65957341-65957360 None:intergenic 20.0%
!!! TTTTTAGAATTTAAGGCAAT+TGG + chr2_2:65957369-65957388 Msa0265600:intron 20.0%
!! ATCCTATTATTTGTGTTAAT+TGG + chr2_2:65957634-65957653 Msa0265600:intron 20.0%
!! ATCCAATTAACACAAATAAT+AGG - chr2_2:65957639-65957658 None:intergenic 20.0%
!! GTATATTAAGAATTGCAAAT+AGG - chr2_2:65958162-65958181 None:intergenic 20.0%
!!! AATTTTAAATTGGCATATGT+AGG + chr2_2:65958186-65958205 Msa0265600:intron 20.0%
!!! AAGTTTAAAACTTATTGTGT+TGG + chr2_2:65958263-65958282 Msa0265600:intron 20.0%
!!! TTTTAGAGTATGTTTCTTTT+AGG + chr2_2:65958720-65958739 Msa0265600:intron 20.0%
!! TTATGTTACAAATGGTTATT+TGG + chr2_2:65958908-65958927 Msa0265600:intron 20.0%
!! TATGTTACAAATGGTTATTT+GGG + chr2_2:65958909-65958928 Msa0265600:intron 20.0%
!!! TGCAAAAGATATTTAAGATT+GGG + chr2_2:65959067-65959086 Msa0265600:intron 20.0%
!! AAAAAAATTTGGTTAGACTT+CGG + chr2_2:65959447-65959466 Msa0265600:intron 20.0%
!! TGCAAACTATTTATTTGAAA+TGG + chr2_2:65959539-65959558 Msa0265600:intron 20.0%
!! TCTAATCTTATCTTTAGATT+GGG - chr2_2:65959576-65959595 None:intergenic 20.0%
!! ATCTAATCTTATCTTTAGAT+TGG - chr2_2:65959577-65959596 None:intergenic 20.0%
!! AATACTATTGTTATACAGAT+CGG - chr2_2:65959616-65959635 None:intergenic 20.0%
!! CTGTATAACAATAGTATTTA+AGG + chr2_2:65959618-65959637 Msa0265600:intron 20.0%
!! GTATAACAATAGTATTTAAG+GGG + chr2_2:65959620-65959639 Msa0265600:intron 20.0%
!! TATAACAATAGTATTTAAGG+GGG + chr2_2:65959621-65959640 Msa0265600:intron 20.0%
!!! AAGTTTCTCATTTTTTATAG+TGG + chr2_2:65959750-65959769 Msa0265600:intron 20.0%
!! ACGACAATCTATTATATTTA+TGG + chr2_2:65959992-65960011 Msa0265600:intron 20.0%
!! CAATCTATTATATTTATGGA+TGG + chr2_2:65959996-65960015 Msa0265600:intron 20.0%
!! ATCTATTATATTTATGGATG+GGG + chr2_2:65959998-65960017 Msa0265600:intron 20.0%
!! TAATTCTTGAGATTCATAAT+AGG - chr2_2:65960525-65960544 None:intergenic 20.0%
!! AAAATATCAAAACACAACAA+AGG - chr2_2:65961677-65961696 None:intergenic 20.0%
!!! ATGAACATAAAAAGCTTTTA+AGG + chr2_2:65961750-65961769 Msa0265600:three_prime_UTR 20.0%
!! AAAGGGAAAAGAAAAAAAAA+AGG - chr2_2:65962017-65962036 None:intergenic 20.0%
!!! TAGGTTGGAAAAAAAAAAAA+AGG + chr2_2:65962220-65962239 Msa0265600:three_prime_UTR 20.0%
!! CTACACTTTGTAATAAATTA+TGG - chr2_2:65962262-65962281 None:intergenic 20.0%
!! CATAATTTATTACAAAGTGT+AGG + chr2_2:65962260-65962279 Msa0265600:three_prime_UTR 20.0%
!! AAACTATATGCATGATTAAA+TGG - chr2_2:65962341-65962360 None:intergenic 20.0%
!! TAAAAGCTCTTTGAGTTATA+CGG - chr2_2:65955744-65955763 None:intergenic 25.0%
!! TTTTGTAAGCTAACAATACA+TGG - chr2_2:65955956-65955975 None:intergenic 25.0%
! ATCAAAAACATCAAATCCAT+GGG - chr2_2:65955980-65955999 None:intergenic 25.0%
! AATCAAAAACATCAAATCCA+TGG - chr2_2:65955981-65956000 None:intergenic 25.0%
!!! ATTAGAAGTGTTTGTACTAA+TGG - chr2_2:65956083-65956102 None:intergenic 25.0%
! ATTAGTACAAACACTTCTAA+TGG + chr2_2:65956082-65956101 Msa0265600:intron 25.0%
! CCATTTCAATTTACCTAAAA+GGG - chr2_2:65956269-65956288 None:intergenic 25.0%
!!! CCTTTTAGGTAAATTGAAAT+GGG + chr2_2:65956267-65956286 Msa0265600:intron 25.0%
! TGTATAACTTCATTCTTCAA+CGG - chr2_2:65956645-65956664 None:intergenic 25.0%
!!! TTTGTTTTATAGAACTATGG+TGG + chr2_2:65956928-65956947 Msa0265600:intron 25.0%
! ATCTTTCAGACAATTATGAA+GGG - chr2_2:65957300-65957319 None:intergenic 25.0%
! AATCACATAATACACAAAAG+TGG + chr2_2:65957342-65957361 Msa0265600:intron 25.0%
!!! TGGCAGTTTTTTAGAATTTA+AGG + chr2_2:65957362-65957381 Msa0265600:intron 25.0%
!!! AGAATTTTAGTATTCATCGA+GGG + chr2_2:65957488-65957507 Msa0265600:intron 25.0%
! ATGAAGCAAACGTTAAAAAA+GGG - chr2_2:65957771-65957790 None:intergenic 25.0%
! AATGAAGCAAACGTTAAAAA+AGG - chr2_2:65957772-65957791 None:intergenic 25.0%
!! GGTCTAAAATTATTGTGTTA+AGG - chr2_2:65957893-65957912 None:intergenic 25.0%
! GAGATAAAAGACCATTAAAA+TGG - chr2_2:65958140-65958159 None:intergenic 25.0%
!!! ATTTGTTTTGGGGTAAAATA+TGG + chr2_2:65958364-65958383 Msa0265600:intron 25.0%
!! CAACACAGATTTTTCATTAT+TGG + chr2_2:65958505-65958524 Msa0265600:intron 25.0%
! ATGTTACAAATGGTTATTTG+GGG + chr2_2:65958910-65958929 Msa0265600:intron 25.0%
!! CAATCTTAAATATCTTTTGC+AGG - chr2_2:65959068-65959087 None:intergenic 25.0%
!! CTGCAAAAGATATTTAAGAT+TGG + chr2_2:65959066-65959085 Msa0265600:intron 25.0%
! AAAAACTTTGCACAGAAATA+CGG - chr2_2:65959114-65959133 None:intergenic 25.0%
!! GCATTCTATTATGTTGATTA+GGG + chr2_2:65959282-65959301 Msa0265600:intron 25.0%
! TGATGAAATATCATTGATCA+AGG + chr2_2:65959779-65959798 Msa0265600:intron 25.0%
! AAAGATGACTAATTCTAACT+GGG - chr2_2:65960335-65960354 None:intergenic 25.0%
! TAAAGATGACTAATTCTAAC+TGG - chr2_2:65960336-65960355 None:intergenic 25.0%
! GATTCACTTATTGAAGAATT+TGG + chr2_2:65960827-65960846 Msa0265600:intron 25.0%
! GATTCACTTATTGAAGAATT+TGG + chr2_2:65960827-65960846 Msa0265600:intron 25.0%
!! TAAATCTTGTGAATCTTTTG+AGG + chr2_2:65961176-65961195 Msa0265600:intron 25.0%
! CAAAGTTAGGTAGAAATAAA+TGG - chr2_2:65961428-65961447 None:intergenic 25.0%
! ATTAGTTGAAAATGCAAAAC+CGG + chr2_2:65961566-65961585 Msa0265600:three_prime_UTR 25.0%
!!! TTGGAAATGAAAGCTTTAAA+AGG + chr2_2:65961707-65961726 Msa0265600:three_prime_UTR 25.0%
!!! AATGAAAGCTTTAAAAGGTA+TGG + chr2_2:65961712-65961731 Msa0265600:three_prime_UTR 25.0%
!!! AACATAAAAAGCTTTTAAGG+AGG + chr2_2:65961753-65961772 Msa0265600:three_prime_UTR 25.0%
!!! ACATAAAAAGCTTTTAAGGA+GGG + chr2_2:65961754-65961773 Msa0265600:three_prime_UTR 25.0%
!!! ATAGTCATGTTTTGTTCAAT+TGG + chr2_2:65961843-65961862 Msa0265600:three_prime_UTR 25.0%
!!! TAGTCATGTTTTGTTCAATT+GGG + chr2_2:65961844-65961863 Msa0265600:three_prime_UTR 25.0%
!! CAATCTAAAATTTGGAAATC+AGG - chr2_2:65961985-65962004 None:intergenic 25.0%
! AAAAGAAAAAAAAAAGGAGG+GGG - chr2_2:65962011-65962030 None:intergenic 25.0%
! GAAAAGAAAAAAAAAAGGAG+GGG - chr2_2:65962012-65962031 None:intergenic 25.0%
! GGAAAAGAAAAAAAAAAGGA+GGG - chr2_2:65962013-65962032 None:intergenic 25.0%
!!! TTTTTTCTTTTCCCTTTAGT+TGG + chr2_2:65962020-65962039 Msa0265600:three_prime_UTR 25.0%
!! TTTTTCTTTTCCCTTTAGTT+GGG + chr2_2:65962021-65962040 Msa0265600:three_prime_UTR 25.0%
! GTTGGAAAAAAAAAAAAAGG+CGG + chr2_2:65962223-65962242 Msa0265600:three_prime_UTR 25.0%
!!! ATTAGTTTTGTAGTGTACAA+TGG - chr2_2:65962476-65962495 None:intergenic 25.0%
! ACACTACAAAACTAATTGTA+TGG + chr2_2:65962480-65962499 Msa0265600:three_prime_UTR 25.0%
!! GAGAATTTTGATGAAGAAGA+GGG - chr2_2:65955808-65955827 None:intergenic 30.0%
!! TGAGAATTTTGATGAAGAAG+AGG - chr2_2:65955809-65955828 None:intergenic 30.0%
!! CCCTTTTAGGTAAATTGAAA+TGG + chr2_2:65956266-65956285 Msa0265600:intron 30.0%
CCCATTTCAATTTACCTAAA+AGG - chr2_2:65956270-65956289 None:intergenic 30.0%
AGTATCAAACAAGAACTTTC+TGG + chr2_2:65956693-65956712 Msa0265600:CDS 30.0%
GTATCAAACAAGAACTTTCT+GGG + chr2_2:65956694-65956713 Msa0265600:CDS 30.0%
! TCTATCTTTAAGCATCCTTT+TGG + chr2_2:65956861-65956880 Msa0265600:intron 30.0%
!! TATGGTGGATTATGAAAAGA+AGG + chr2_2:65956943-65956962 Msa0265600:CDS 30.0%
TTATGAAAAGAAGGCAAACA+TGG + chr2_2:65956952-65956971 Msa0265600:CDS 30.0%
AAGGATGATAAATTCTGCAA+AGG - chr2_2:65957112-65957131 None:intergenic 30.0%
GCTATGCTAGTAAATACATA+TGG - chr2_2:65957147-65957166 None:intergenic 30.0%
CATCTTTCAGACAATTATGA+AGG - chr2_2:65957301-65957320 None:intergenic 30.0%
CTTCATAATTGTCTGAAAGA+TGG + chr2_2:65957299-65957318 Msa0265600:intron 30.0%
ATAATTGTCTGAAAGATGGT+TGG + chr2_2:65957303-65957322 Msa0265600:intron 30.0%
TAATTGTCTGAAAGATGGTT+GGG + chr2_2:65957304-65957323 Msa0265600:intron 30.0%
GAGTTAAGGTGATTAAGAAT+AGG - chr2_2:65957424-65957443 None:intergenic 30.0%
!! CTATGTGATGATTTTGAGAA+CGG + chr2_2:65957464-65957483 Msa0265600:intron 30.0%
!! CAGAATTTTAGTATTCATCG+AGG + chr2_2:65957487-65957506 Msa0265600:intron 30.0%
! ATATCTTTCGATCTTTTGAC+TGG + chr2_2:65957541-65957560 Msa0265600:intron 30.0%
TATAGACACATCATGATGTT+TGG + chr2_2:65957669-65957688 Msa0265600:intron 30.0%
TGAAGCAAACGTTAAAAAAG+GGG - chr2_2:65957770-65957789 None:intergenic 30.0%
! TTGCCTTATGGAACAAATTT+TGG + chr2_2:65957801-65957820 Msa0265600:CDS 30.0%
! CTACCAAAATTTGTTCCATA+AGG - chr2_2:65957807-65957826 None:intergenic 30.0%
AAGCAAAGTAAATGAAACCT+TGG - chr2_2:65957930-65957949 None:intergenic 30.0%
TGAATCTAAGTGATTGATGT+TGG + chr2_2:65958045-65958064 Msa0265600:exon 30.0%
TCCTTGACATAAAACACATT+GGG - chr2_2:65958568-65958587 None:intergenic 30.0%
ATCCTTGACATAAAACACAT+TGG - chr2_2:65958569-65958588 None:intergenic 30.0%
! TAGTGGATATTTGTAACTGT+CGG + chr2_2:65958633-65958652 Msa0265600:intron 30.0%
TAAAGTTTAAATTCCTGCAC+CGG - chr2_2:65958670-65958689 None:intergenic 30.0%
! GTCTGATTTTCTGTTTCAAT+TGG + chr2_2:65958813-65958832 Msa0265600:intron 30.0%
TGAGTGACTTATGTTACAAA+TGG + chr2_2:65958900-65958919 Msa0265600:intron 30.0%
AATGCCAATGTTCATTTCAT+GGG + chr2_2:65958948-65958967 Msa0265600:intron 30.0%
!!! TCAATGATGAGTGGATTTTT+TGG + chr2_2:65958988-65959007 Msa0265600:intron 30.0%
!! GTATTTCTGTGCAAAGTTTT+TGG + chr2_2:65959113-65959132 Msa0265600:intron 30.0%
TGTATTACCTTTGATTGAAG+TGG + chr2_2:65959195-65959214 Msa0265600:intron 30.0%
ATTGTAAGTTGTATCAATGC+AGG + chr2_2:65959230-65959249 Msa0265600:intron 30.0%
TTGTAAGTTGTATCAATGCA+GGG + chr2_2:65959231-65959250 Msa0265600:intron 30.0%
! ATTTTCCAGTTCAGTTAAGT+TGG + chr2_2:65959260-65959279 Msa0265600:intron 30.0%
! GGCATTCTATTATGTTGATT+AGG + chr2_2:65959281-65959300 Msa0265600:intron 30.0%
AAAATTGTTTGGTTAGACTC+CGG + chr2_2:65959391-65959410 Msa0265600:intron 30.0%
CAAATACTATTTACAGCATC+CGG - chr2_2:65959413-65959432 None:intergenic 30.0%
!! CTCTCTTTGAAGCTTAAAAA+GGG - chr2_2:65959668-65959687 None:intergenic 30.0%
!! TCTCTCTTTGAAGCTTAAAA+AGG - chr2_2:65959669-65959688 None:intergenic 30.0%
GAAATAAAGAAAAAGCTGTC+TGG + chr2_2:65959687-65959706 Msa0265600:intron 30.0%
GAGAAACTTTATGGACTTTA+TGG - chr2_2:65959739-65959758 None:intergenic 30.0%
!!! CTCATTTTTTATAGTGGTTG+AGG + chr2_2:65959756-65959775 Msa0265600:intron 30.0%
AAAACTTCGCAGAGAAAATA+TGG - chr2_2:65959826-65959845 None:intergenic 30.0%
! TATTTTCTCTGCGAAGTTTT+TGG + chr2_2:65959826-65959845 Msa0265600:intron 30.0%
TCTAAGTTGTAGCAATGTTT+AGG + chr2_2:65959942-65959961 Msa0265600:intron 30.0%
CTAAGTTGTAGCAATGTTTA+GGG + chr2_2:65959943-65959962 Msa0265600:intron 30.0%
GATTGTCGTATTATTGCAAT+TGG - chr2_2:65959981-65960000 None:intergenic 30.0%
! TCTAACCTGGTATCTTATTT+CGG - chr2_2:65960359-65960378 None:intergenic 30.0%
AAAGATGACTAATTCTAACC+TGG - chr2_2:65960372-65960391 None:intergenic 30.0%
! TCTAACCTGGTATCTTATTT+CGG - chr2_2:65960359-65960378 None:intergenic 30.0%
AAAGATGACTAATTCTAACC+TGG - chr2_2:65960372-65960391 None:intergenic 30.0%
GATTTAGTTACTAGTGAAAC+AGG + chr2_2:65960430-65960449 Msa0265600:intron 30.0%
! AAACAGGATTTTCAGCATAA+TGG + chr2_2:65960446-65960465 Msa0265600:intron 30.0%
TCTCAAGAATTAAGATCTTC+TGG + chr2_2:65960533-65960552 Msa0265600:intron 30.0%
! AGACTTAATTTTCCTTTCCT+CGG - chr2_2:65960667-65960686 None:intergenic 30.0%
!! ATATGGGATGATTTGATTTG+CGG - chr2_2:65960715-65960734 None:intergenic 30.0%
AATCATCCCATATTGCTAAT+TGG + chr2_2:65960722-65960741 Msa0265600:intron 30.0%
! TATTGAAGAATTTGGAGTTG+TGG + chr2_2:65960871-65960890 Msa0265600:intron 30.0%
!! GATTTTAATGCCCTTCAAAA+AGG - chr2_2:65960903-65960922 None:intergenic 30.0%
!!! TTTTGAAGGGCATTAAAATC+TGG + chr2_2:65960903-65960922 Msa0265600:intron 30.0%
!! TTTGAAGGGCATTAAAATCT+GGG + chr2_2:65960904-65960923 Msa0265600:intron 30.0%
ATGTTAAGAATTCGAATCAG+TGG + chr2_2:65960991-65961010 Msa0265600:intron 30.0%
!!! GAATCTTTTGAGGTTATTAG+TGG + chr2_2:65961186-65961205 Msa0265600:intron 30.0%
AGATGAACACTAGATAAGTA+GGG - chr2_2:65961246-65961265 None:intergenic 30.0%
AAGATGAACACTAGATAAGT+AGG - chr2_2:65961247-65961266 None:intergenic 30.0%
TCTATTATTATGGTTGCAGA+TGG + chr2_2:65961450-65961469 Msa0265600:intron 30.0%
!! TTACTTTTCAGTCCCAAAAA+TGG - chr2_2:65961487-65961506 None:intergenic 30.0%
!!! ATTTTTGGGACTGAAAAGTA+AGG + chr2_2:65961486-65961505 Msa0265600:three_prime_UTR 30.0%
TCAACTAATGAAGAACATCT+CGG - chr2_2:65961555-65961574 None:intergenic 30.0%
TTAGTTGAAAATGCAAAACC+GGG + chr2_2:65961567-65961586 Msa0265600:three_prime_UTR 30.0%
!! GTTTAGTATTTTTATGCCGA+TGG + chr2_2:65961933-65961952 Msa0265600:three_prime_UTR 30.0%
GGGAAAAGAAAAAAAAAAGG+AGG - chr2_2:65962014-65962033 None:intergenic 30.0%
CAAAACACGTTGAAACATTT+CGG - chr2_2:65962129-65962148 None:intergenic 30.0%
GAAGTAAAAATTAAGCCACT+AGG + chr2_2:65962407-65962426 Msa0265600:three_prime_UTR 30.0%
AAAATTAAGCCACTAGGATT+TGG + chr2_2:65962413-65962432 Msa0265600:three_prime_UTR 30.0%
! TGTTAGCTTACAAAAACCCA+TGG + chr2_2:65955961-65955980 Msa0265600:intron 35.0%
CATCGTATGAATTTAGCGAT+TGG + chr2_2:65956534-65956553 Msa0265600:CDS 35.0%
AAACATCTTTCGTAAGTGTC+TGG - chr2_2:65956725-65956744 None:intergenic 35.0%
CACTTACGAAAGATGTTTCT+AGG + chr2_2:65956727-65956746 Msa0265600:CDS 35.0%
TCAATCTCAGATCTCATTGA+AGG - chr2_2:65956777-65956796 None:intergenic 35.0%
! TCAATGAGATCTGAGATTGA+TGG + chr2_2:65956777-65956796 Msa0265600:CDS 35.0%
! TTGTGGATTGATTGCTAACA+CGG + chr2_2:65956829-65956848 Msa0265600:intron 35.0%
! TCTTTAAGCATCCTTTTGGT+TGG + chr2_2:65956865-65956884 Msa0265600:intron 35.0%
!! CTTTAAGCATCCTTTTGGTT+GGG + chr2_2:65956866-65956885 Msa0265600:intron 35.0%
AATTGTCTGAAAGATGGTTG+GGG + chr2_2:65957305-65957324 Msa0265600:intron 35.0%
GGAGTTCATTAGTGATAACA+GGG + chr2_2:65957509-65957528 Msa0265600:intron 35.0%
! TGCTACAGTATCTGCATTTT+TGG - chr2_2:65957615-65957634 None:intergenic 35.0%
!! AACAAATTTTGGTAGTCCAG+AGG + chr2_2:65957812-65957831 Msa0265600:CDS 35.0%
!! ACAAATTTTGGTAGTCCAGA+GGG + chr2_2:65957813-65957832 Msa0265600:CDS 35.0%
! ACCTCGTATTCAATTTTCCA+AGG + chr2_2:65957910-65957929 Msa0265600:intron 35.0%
ACCTTGGAAAATTGAATACG+AGG - chr2_2:65957914-65957933 None:intergenic 35.0%
CAATCACTTAGATTCAACGA+CGG - chr2_2:65958041-65958060 None:intergenic 35.0%
!! TTGATGTTGGTGATGAAGAA+AGG + chr2_2:65958058-65958077 Msa0265600:three_prime_UTR 35.0%
!!! GTGTATGCATGCCATTTTAA+TGG + chr2_2:65958126-65958145 Msa0265600:three_prime_UTR 35.0%
!!! TGTGCTTTACTGTTTTTACC+TGG + chr2_2:65958216-65958235 Msa0265600:intron 35.0%
GGGTAAAATATGGTTTCTGT+TGG + chr2_2:65958374-65958393 Msa0265600:intron 35.0%
AATATGGTTTCTGTTGGTCA+CGG + chr2_2:65958380-65958399 Msa0265600:intron 35.0%
TTGTTTAACCAGAGCACAAA+CGG - chr2_2:65958536-65958555 None:intergenic 35.0%
!! AAGGATTGAGAGTGTGATTT+TGG + chr2_2:65958583-65958602 Msa0265600:intron 35.0%
ATCTCATATCTCTCATGTAG+TGG + chr2_2:65958616-65958635 Msa0265600:intron 35.0%
TTTGCAACTATGTGTACGAT+TGG + chr2_2:65958762-65958781 Msa0265600:intron 35.0%
CTGTTTCAATTGGCAATATG+TGG + chr2_2:65958823-65958842 Msa0265600:intron 35.0%
! AAATGGTTATTTGGGGTCTA+TGG + chr2_2:65958917-65958936 Msa0265600:intron 35.0%
GAATGCCAATGTTCATTTCA+TGG + chr2_2:65958947-65958966 Msa0265600:intron 35.0%
!! TTTCTGTGCAAAGTTTTTGG+TGG + chr2_2:65959116-65959135 Msa0265600:intron 35.0%
AACTAACAACTGATGTTTGC+TGG + chr2_2:65959150-65959169 Msa0265600:intron 35.0%
TTAATAGCAAGACAACACAG+TGG - chr2_2:65959365-65959384 None:intergenic 35.0%
TAGACTTCGGATGTTGTAAT+TGG + chr2_2:65959460-65959479 Msa0265600:intron 35.0%
TGCTTTACTGAGATTGAAGT+CGG + chr2_2:65959487-65959506 Msa0265600:intron 35.0%
TCTTTAGATTGGGCAATTTC+TGG - chr2_2:65959566-65959585 None:intergenic 35.0%
CTATTGTTATACAGATCGGT+AGG - chr2_2:65959612-65959631 None:intergenic 35.0%
AACAATAGTATTTAAGGGGG+TGG + chr2_2:65959624-65959643 Msa0265600:intron 35.0%
ACAATAGTATTTAAGGGGGT+GGG + chr2_2:65959625-65959644 Msa0265600:intron 35.0%
TGGACAATCTTGAGTCATAA+AGG - chr2_2:65959806-65959825 None:intergenic 35.0%
CTTTGCTCTTCTATGTTAGA+AGG + chr2_2:65960070-65960089 Msa0265600:intron 35.0%
!! ACTGGTCTTCAAATATTCCA+CGG - chr2_2:65960109-65960128 None:intergenic 35.0%
ATAAGATTCAGATCAGCAAC+TGG - chr2_2:65960127-65960146 None:intergenic 35.0%
GTTGCTGATCTGAATCTTAT+AGG + chr2_2:65960127-65960146 Msa0265600:intron 35.0%
GGTAAATAGCAAGTTCTACA+TGG - chr2_2:65960184-65960203 None:intergenic 35.0%
TCTTATGATCGTAATCAGCA+AGG - chr2_2:65960205-65960224 None:intergenic 35.0%
TAATTGTTGCACACCTGAAT+AGG + chr2_2:65960243-65960262 Msa0265600:intron 35.0%
TCTAACCTAGTATCCTATTC+AGG - chr2_2:65960259-65960278 None:intergenic 35.0%
GAAACTAATTATTGCACACC+TGG + chr2_2:65960300-65960319 Msa0265600:intron 35.0%
AATTATTGCACACCTGGAAT+AGG + chr2_2:65960306-65960325 Msa0265600:intron 35.0%
CTTTACCGAAATAAGATACC+AGG + chr2_2:65960351-65960370 Msa0265600:intron 35.0%
CTTTACCGAAATAAGATACC+AGG + chr2_2:65960351-65960370 Msa0265600:intron 35.0%
AAAATGATTCGACGGATACT+TGG + chr2_2:65960560-65960579 Msa0265600:intron 35.0%
TTATAGGTCTCAGTTGTTAC+TGG + chr2_2:65960632-65960651 Msa0265600:intron 35.0%
TATAGGTCTCAGTTGTTACT+GGG + chr2_2:65960633-65960652 Msa0265600:intron 35.0%
ATTTGTGTACGCAACAAAAC+TGG + chr2_2:65960689-65960708 Msa0265600:intron 35.0%
CTGGAACCAATTAGCAATAT+GGG - chr2_2:65960731-65960750 None:intergenic 35.0%
! TCTGGAACCAATTAGCAATA+TGG - chr2_2:65960732-65960751 None:intergenic 35.0%
TGCATCATATTATCCAGTGT+TGG + chr2_2:65960804-65960823 Msa0265600:intron 35.0%
GCATCATATTATCCAGTGTT+GGG + chr2_2:65960805-65960824 Msa0265600:intron 35.0%
! AAGAATTTGGAATCCAGTCT+TGG + chr2_2:65960840-65960859 Msa0265600:intron 35.0%
! AGAATTTGGAATCCAGTCTT+GGG + chr2_2:65960841-65960860 Msa0265600:intron 35.0%
! TGTGGAAACTACCTTTTTGA+AGG + chr2_2:65960889-65960908 Msa0265600:intron 35.0%
! GTGGAAACTACCTTTTTGAA+GGG + chr2_2:65960890-65960909 Msa0265600:intron 35.0%
!! TTGAAGGGCATTAAAATCTG+GGG + chr2_2:65960905-65960924 Msa0265600:intron 35.0%
!! GCTTAGAGGCTAGTTTATTT+AGG + chr2_2:65960928-65960947 Msa0265600:intron 35.0%
TCTTGGAGTAAACTTGGTTA+TGG + chr2_2:65961016-65961035 Msa0265600:intron 35.0%
CTTGGAGTAAACTTGGTTAT+GGG + chr2_2:65961017-65961036 Msa0265600:intron 35.0%
ACTTGGTTATGGGATTATAG+TGG + chr2_2:65961027-65961046 Msa0265600:intron 35.0%
TTTCCAGCTAGATTGGAAAT+TGG + chr2_2:65961114-65961133 Msa0265600:intron 35.0%
TTTCCAATTTCCAATCTAGC+TGG - chr2_2:65961120-65961139 None:intergenic 35.0%
GCTAGATTGGAAATTGGAAA+TGG + chr2_2:65961120-65961139 Msa0265600:intron 35.0%
!! AGGTTATTAGTGGACTTCAT+GGG + chr2_2:65961196-65961215 Msa0265600:intron 35.0%
AATCACTTGAATATGCAGAG+CGG - chr2_2:65961403-65961422 None:intergenic 35.0%
AAACCGGGTGAAATGTATTA+TGG + chr2_2:65961582-65961601 Msa0265600:three_prime_UTR 35.0%
AACCGGGTGAAATGTATTAT+GGG + chr2_2:65961583-65961602 Msa0265600:three_prime_UTR 35.0%
! TGAAATGTATTATGGGCTGA+GGG + chr2_2:65961590-65961609 Msa0265600:three_prime_UTR 35.0%
! GGATATATTTTACCCTGTGA+TGG + chr2_2:65961627-65961646 Msa0265600:three_prime_UTR 35.0%
TGTTATCTTGATCCATCACA+GGG - chr2_2:65961642-65961661 None:intergenic 35.0%
TATCAAAACACAACAAAGGC+AGG - chr2_2:65961673-65961692 None:intergenic 35.0%
!!! TGATATTTTAGCCGTGAGAT+TGG + chr2_2:65961688-65961707 Msa0265600:three_prime_UTR 35.0%
AGCTTTCATTTCCAATCTCA+CGG - chr2_2:65961702-65961721 None:intergenic 35.0%
!! GAAAGCTTTAAAAGGTATGG+TGG + chr2_2:65961715-65961734 Msa0265600:three_prime_UTR 35.0%
! CAAGCTGAAAGCATATAGTA+AGG - chr2_2:65961885-65961904 None:intergenic 35.0%
CTTACTATATGCTTTCAGCT+TGG + chr2_2:65961883-65961902 Msa0265600:three_prime_UTR 35.0%
TGATGAAAGAGTTTATCAGC+AGG + chr2_2:65961907-65961926 Msa0265600:three_prime_UTR 35.0%
GATGAAAGAGTTTATCAGCA+GGG + chr2_2:65961908-65961927 Msa0265600:three_prime_UTR 35.0%
CCAAAGCACAATTAAACCAT+CGG - chr2_2:65961952-65961971 None:intergenic 35.0%
GCATTTGACATTTGAGTAGA+TGG + chr2_2:65962049-65962068 Msa0265600:three_prime_UTR 35.0%
! CGAAATGTTTCAACGTGTTT+TGG + chr2_2:65962127-65962146 Msa0265600:three_prime_UTR 35.0%
!! AATGTTTCAACGTGTTTTGG+AGG + chr2_2:65962130-65962149 Msa0265600:three_prime_UTR 35.0%
!!! GTGTTTTGGAGGTTTCTATA+GGG + chr2_2:65962141-65962160 Msa0265600:three_prime_UTR 35.0%
CTCTATGAAGTTCGGATTAT+AGG - chr2_2:65962185-65962204 None:intergenic 35.0%
TAGGAAATGTACCTACTGAT+GGG + chr2_2:65962279-65962298 Msa0265600:three_prime_UTR 35.0%
!! AGTTTTGTAGTGTACAATGG+AGG - chr2_2:65962473-65962492 None:intergenic 35.0%
! GTGTTTGTGCTTACCCTTTT+AGG + chr2_2:65956253-65956272 Msa0265600:intron 40.0%
! ACAGGAGGTTGATTGATGAT+CGG + chr2_2:65956469-65956488 Msa0265600:CDS 40.0%
TGAACATGAGATGCATTCGA+GGG + chr2_2:65956569-65956588 Msa0265600:CDS 40.0%
TGAAGTTGGAGTCTGATCTT+AGG + chr2_2:65956610-65956629 Msa0265600:CDS 40.0%
! CAAACAAGAACTTTCTGGGA+AGG + chr2_2:65956698-65956717 Msa0265600:CDS 40.0%
ATGCAGAAATCCCAACCAAA+AGG - chr2_2:65956879-65956898 None:intergenic 40.0%
GCAGTCAATGGAGAAAAACA+TGG + chr2_2:65956991-65957010 Msa0265600:CDS 40.0%
GGAGAAAAACATGGTTTCCA+TGG + chr2_2:65957000-65957019 Msa0265600:CDS 40.0%
ACGAAGTTTCTCAACTTCTC+GGG - chr2_2:65957026-65957045 None:intergenic 40.0%
CACGAAGTTTCTCAACTTCT+CGG - chr2_2:65957027-65957046 None:intergenic 40.0%
TAGCATGGATGGAAGACATT+GGG + chr2_2:65957057-65957076 Msa0265600:CDS 40.0%
CATATGGAGTTAACGACTGA+AGG - chr2_2:65957131-65957150 None:intergenic 40.0%
ATTGTCTGAAAGATGGTTGG+GGG + chr2_2:65957306-65957325 Msa0265600:intron 40.0%
! AGACAAGTTAGAGAAAGCGT+GGG - chr2_2:65957446-65957465 None:intergenic 40.0%
TAGACAAGTTAGAGAAAGCG+TGG - chr2_2:65957447-65957466 None:intergenic 40.0%
GGGAGTTCATTAGTGATAAC+AGG + chr2_2:65957508-65957527 Msa0265600:intron 40.0%
AACGTTTGCTTCATTCATGC+AGG + chr2_2:65957777-65957796 Msa0265600:intron 40.0%
ATTCATGCAGGTTTGCCTTA+TGG + chr2_2:65957789-65957808 Msa0265600:intron 40.0%
!! CAAATTTTGGTAGTCCAGAG+GGG + chr2_2:65957814-65957833 Msa0265600:CDS 40.0%
!! AAATTTTGGTAGTCCAGAGG+GGG + chr2_2:65957815-65957834 Msa0265600:CDS 40.0%
ACACCATATCCATCTGCATA+TGG - chr2_2:65957852-65957871 None:intergenic 40.0%
AGATGGATATGGTGTTCACA+TGG + chr2_2:65957857-65957876 Msa0265600:CDS 40.0%
CTTTGCTTGTGCTTCTGTTT+AGG + chr2_2:65957942-65957961 Msa0265600:intron 40.0%
CAGAGAAAGGTCCTCTTTAT+GGG + chr2_2:65957971-65957990 Msa0265600:CDS 40.0%
AGAGAAAGGTCCTCTTTATG+GGG + chr2_2:65957972-65957991 Msa0265600:CDS 40.0%
ACTTCGCTAACACAGCTAAA+GGG - chr2_2:65958092-65958111 None:intergenic 40.0%
TACTTCGCTAACACAGCTAA+AGG - chr2_2:65958093-65958112 None:intergenic 40.0%
ATATGGTTTCTGTTGGTCAC+GGG + chr2_2:65958381-65958400 Msa0265600:intron 40.0%
AATCATGTGAGCTGAAGTTC+AGG + chr2_2:65958452-65958471 Msa0265600:intron 40.0%
TTGTGCTCTGGTTAAACAAG+TGG + chr2_2:65958537-65958556 Msa0265600:intron 40.0%
! GCCCAATGTGTTTTATGTCA+AGG + chr2_2:65958564-65958583 Msa0265600:intron 40.0%
CATGCCCATGAAATGAACAT+TGG - chr2_2:65958955-65958974 None:intergenic 40.0%
!! TTTGGAAGTGCTTGCTGTTA+TGG + chr2_2:65959006-65959025 Msa0265600:intron 40.0%
! GAAGTTTCCGTACTCACTTT+TGG + chr2_2:65959028-65959047 Msa0265600:intron 40.0%
! GTTGACTCCAAAAGTGAGTA+CGG - chr2_2:65959038-65959057 None:intergenic 40.0%
! TGTCATGCCACTTCAATCAA+AGG - chr2_2:65959205-65959224 None:intergenic 40.0%
GAATGCCAACTTAACTGAAC+TGG - chr2_2:65959268-65959287 None:intergenic 40.0%
AACCACAAGTATGTTGCACA+TGG + chr2_2:65959307-65959326 Msa0265600:intron 40.0%
ATCCATGTGCAACATACTTG+TGG - chr2_2:65959312-65959331 None:intergenic 40.0%
TTTACTGAGATTGAAGTCGG+TGG + chr2_2:65959490-65959509 Msa0265600:intron 40.0%
CAATAGTATTTAAGGGGGTG+GGG + chr2_2:65959626-65959645 Msa0265600:intron 40.0%
!! TTTCTCTGCGAAGTTTTTGG+TGG + chr2_2:65959829-65959848 Msa0265600:intron 40.0%
! TAACTACTGCTGTTTGCTAG+AGG + chr2_2:65959859-65959878 Msa0265600:intron 40.0%
! AACTACTGCTGTTTGCTAGA+GGG + chr2_2:65959860-65959879 Msa0265600:intron 40.0%
!!! GGGATGCATTTGTTTTGAAC+TGG + chr2_2:65959897-65959916 Msa0265600:intron 40.0%
ATCTACCATCACCATACTTG+TGG - chr2_2:65960027-65960046 None:intergenic 40.0%
!! ACAAGTATGGTGATGGTAGA+TGG + chr2_2:65960026-65960045 Msa0265600:intron 40.0%
!! CAAGTATGGTGATGGTAGAT+GGG + chr2_2:65960027-65960046 Msa0265600:intron 40.0%
!! AAGTATGGTGATGGTAGATG+GGG + chr2_2:65960028-65960047 Msa0265600:intron 40.0%
! CTGGTCTTCAAATATTCCAC+GGG - chr2_2:65960108-65960127 None:intergenic 40.0%
! GGATTTTCAGCATAATGGTC+AGG + chr2_2:65960451-65960470 Msa0265600:intron 40.0%
CTGGAGCTAAAATGATTCGA+CGG + chr2_2:65960552-65960571 Msa0265600:intron 40.0%
CAATAAGTGAATCCCAACAC+TGG - chr2_2:65960820-65960839 None:intergenic 40.0%
CAATAAGTGAATCCCAAGAC+TGG - chr2_2:65960856-65960875 None:intergenic 40.0%
!! TGAAGGGCATTAAAATCTGG+GGG + chr2_2:65960906-65960925 Msa0265600:intron 40.0%
ATTAAAATCTGGGGGCTTAG+AGG + chr2_2:65960914-65960933 Msa0265600:intron 40.0%
! AATTCGAATCAGTGGACTCT+TGG + chr2_2:65960999-65961018 Msa0265600:intron 40.0%
TAGTGGAATAGATGAACCAC+CGG + chr2_2:65961044-65961063 Msa0265600:intron 40.0%
!! GAGGTTATTAGTGGACTTCA+TGG + chr2_2:65961195-65961214 Msa0265600:intron 40.0%
!! GGTTATTAGTGGACTTCATG+GGG + chr2_2:65961197-65961216 Msa0265600:intron 40.0%
!! GAGAGCTGGAAACCATTTTT+GGG + chr2_2:65961472-65961491 Msa0265600:three_prime_UTR 40.0%
! CATAATGCTGCGAGATTTTG+CGG + chr2_2:65961525-65961544 Msa0265600:three_prime_UTR 40.0%
AGCCCATAATACATTTCACC+CGG - chr2_2:65961588-65961607 None:intergenic 40.0%
! GTGAAATGTATTATGGGCTG+AGG + chr2_2:65961589-65961608 Msa0265600:three_prime_UTR 40.0%
GTGTTATCTTGATCCATCAC+AGG - chr2_2:65961643-65961662 None:intergenic 40.0%
! AAGCATATAGTAAGGCACCA+AGG - chr2_2:65961877-65961896 None:intergenic 40.0%
CCGATGGTTTAATTGTGCTT+TGG + chr2_2:65961949-65961968 Msa0265600:three_prime_UTR 40.0%
! GGGGGTGACAATCTAAAATT+TGG - chr2_2:65961993-65962012 None:intergenic 40.0%
AATGCACAAGCCCAACTAAA+GGG - chr2_2:65962034-65962053 None:intergenic 40.0%
AAATGCACAAGCCCAACTAA+AGG - chr2_2:65962035-65962054 None:intergenic 40.0%
AGTTTCTTGCACGCTCTATT+TGG + chr2_2:65962093-65962112 Msa0265600:three_prime_UTR 40.0%
!!! CGTGTTTTGGAGGTTTCTAT+AGG + chr2_2:65962140-65962159 Msa0265600:three_prime_UTR 40.0%
TATAGGGTATGTATGCCGTT+CGG + chr2_2:65962157-65962176 Msa0265600:three_prime_UTR 40.0%
TTCGGATTATAGGATCCGAA+CGG - chr2_2:65962175-65962194 None:intergenic 40.0%
GTAGGAAATGTACCTACTGA+TGG + chr2_2:65962278-65962297 Msa0265600:three_prime_UTR 40.0%
AGGAAATGTACCTACTGATG+GGG + chr2_2:65962280-65962299 Msa0265600:three_prime_UTR 40.0%
GCATACTATCCAAATCCTAG+TGG - chr2_2:65962425-65962444 None:intergenic 40.0%
GGATTTGGATAGTATGCATG+AGG + chr2_2:65962428-65962447 Msa0265600:three_prime_UTR 40.0%
TGAGTTATACGGCGTCGTTT+GGG - chr2_2:65955733-65955752 None:intergenic 45.0%
TTGAGTTATACGGCGTCGTT+TGG - chr2_2:65955734-65955753 None:intergenic 45.0%
! TTGGTGGCTCTCTATGAACA+CGG - chr2_2:65956302-65956321 None:intergenic 45.0%
TCTAACAATGCTGGATGAGG+TGG - chr2_2:65956399-65956418 None:intergenic 45.0%
ACCTCATCCAGCATTGTTAG+AGG + chr2_2:65956398-65956417 Msa0265600:CDS 45.0%
TCCTCTAACAATGCTGGATG+AGG - chr2_2:65956402-65956421 None:intergenic 45.0%
AGCTCTTCCTCTAACAATGC+TGG - chr2_2:65956408-65956427 None:intergenic 45.0%
AAGTGCAGCATGCTGAAATG+AGG + chr2_2:65956430-65956449 Msa0265600:CDS 45.0%
CTGAACATGAGATGCATTCG+AGG + chr2_2:65956568-65956587 Msa0265600:CDS 45.0%
GAAGGCAAACATGGAGTTCA+TGG + chr2_2:65956961-65956980 Msa0265600:CDS 45.0%
ACATGGAGTTCATGGAACAG+AGG + chr2_2:65956969-65956988 Msa0265600:CDS 45.0%
CTAGCATGGATGGAAGACAT+TGG + chr2_2:65957056-65957075 Msa0265600:CDS 45.0%
AGCATGGATGGAAGACATTG+GGG + chr2_2:65957058-65957077 Msa0265600:CDS 45.0%
! TAGAGAAAGCGTGGGAGTTA+AGG - chr2_2:65957438-65957457 None:intergenic 45.0%
!! TCTTTTGACTGGCAGTGTTG+AGG + chr2_2:65957552-65957571 Msa0265600:intron 45.0%
!! CTTTTGACTGGCAGTGTTGA+GGG + chr2_2:65957553-65957572 Msa0265600:intron 45.0%
ATCCCACAAGGTGTATACGT+AGG + chr2_2:65957583-65957602 Msa0265600:intron 45.0%
TCCCACAAGGTGTATACGTA+GGG + chr2_2:65957584-65957603 Msa0265600:intron 45.0%
TCCCTACGTATACACCTTGT+GGG - chr2_2:65957588-65957607 None:intergenic 45.0%
ATCCCTACGTATACACCTTG+TGG - chr2_2:65957589-65957608 None:intergenic 45.0%
!! AATTTTGGTAGTCCAGAGGG+GGG + chr2_2:65957816-65957835 Msa0265600:CDS 45.0%
ATCCATCTGCATATGGAGGT+GGG - chr2_2:65957845-65957864 None:intergenic 45.0%
TATCCATCTGCATATGGAGG+TGG - chr2_2:65957846-65957865 None:intergenic 45.0%
CCATATCCATCTGCATATGG+AGG - chr2_2:65957849-65957868 None:intergenic 45.0%
CCTCCATATGCAGATGGATA+TGG + chr2_2:65957846-65957865 Msa0265600:CDS 45.0%
GCAGAGAAAGGTCCTCTTTA+TGG + chr2_2:65957970-65957989 Msa0265600:CDS 45.0%
AAAGGTCCTCTTTATGGGGT+GGG + chr2_2:65957976-65957995 Msa0265600:CDS 45.0%
TAGCTGTGTTAGCGAAGTAG+CGG + chr2_2:65958094-65958113 Msa0265600:three_prime_UTR 45.0%
! ACTGCAGCAATGTTTTCTCC+AGG - chr2_2:65958237-65958256 None:intergenic 45.0%
GCTCACATGATTCAACACGT+GGG - chr2_2:65958444-65958463 None:intergenic 45.0%
AGCTCACATGATTCAACACG+TGG - chr2_2:65958445-65958464 None:intergenic 45.0%
AGTTTAAATTCCTGCACCGG+TGG - chr2_2:65958667-65958686 None:intergenic 45.0%
CGATTGGATAACAATCTCCC+AGG + chr2_2:65958778-65958797 Msa0265600:intron 45.0%
TAACAATCTCCCAGGAATGC+TGG + chr2_2:65958786-65958805 Msa0265600:intron 45.0%
! GCAATATGTGGTCTTGCAAC+TGG + chr2_2:65958835-65958854 Msa0265600:intron 45.0%
TGCAAGCTCTCAATGATGAG+TGG + chr2_2:65958979-65958998 Msa0265600:intron 45.0%
! ACAACTGATGTTTGCTGGCA+TGG + chr2_2:65959155-65959174 Msa0265600:intron 45.0%
ATAGCAAGACAACACAGTGG+AGG - chr2_2:65959362-65959381 None:intergenic 45.0%
TGAGATTGAAGTCGGTGGTA+GGG + chr2_2:65959495-65959514 Msa0265600:intron 45.0%
GGAAACCACAAGTATGGTGA+TGG + chr2_2:65960019-65960038 Msa0265600:intron 45.0%
GCTCTTCTATGTTAGAAGGC+CGG + chr2_2:65960074-65960093 Msa0265600:intron 45.0%
GCACACCTGAATAGGATACT+AGG + chr2_2:65960251-65960270 Msa0265600:intron 45.0%
CTAACTGGGTATCCTATTCC+AGG - chr2_2:65960321-65960340 None:intergenic 45.0%
! GCTAATTGGTTCCAGAGTAC+AGG + chr2_2:65960736-65960755 Msa0265600:intron 45.0%
AACTGAGTGATCCTGTACTC+TGG - chr2_2:65960750-65960769 None:intergenic 45.0%
GTGGACTCTTGGAGTAAACT+TGG + chr2_2:65961010-65961029 Msa0265600:intron 45.0%
! TGCCTAGTATGTGGAGGTTT+TGG + chr2_2:65961069-65961088 Msa0265600:intron 45.0%
! GCCTAGTATGTGGAGGTTTT+GGG + chr2_2:65961070-65961089 Msa0265600:intron 45.0%
! CCTAGTATGTGGAGGTTTTG+GGG + chr2_2:65961071-65961090 Msa0265600:intron 45.0%
AACCTGCTTTCCAGCTAGAT+TGG + chr2_2:65961107-65961126 Msa0265600:intron 45.0%
TTCCAATCTAGCTGGAAAGC+AGG - chr2_2:65961112-65961131 None:intergenic 45.0%
!! TATTAGTGGACTTCATGGGG+TGG + chr2_2:65961200-65961219 Msa0265600:intron 45.0%
GGTGGTGAATGCTAGATGTT+TGG + chr2_2:65961218-65961237 Msa0265600:intron 45.0%
! GGAGAGCTGGAAACCATTTT+TGG + chr2_2:65961471-65961490 Msa0265600:three_prime_UTR 45.0%
CGCAAAATCTCGCAGCATTA+TGG - chr2_2:65961527-65961546 None:intergenic 45.0%
! TTCAATTGGGTTGTCCTCCT+TGG + chr2_2:65961857-65961876 Msa0265600:three_prime_UTR 45.0%
! CATATAGTAAGGCACCAAGG+AGG - chr2_2:65961874-65961893 None:intergenic 45.0%
GAAAGAGTTTATCAGCAGGG+CGG + chr2_2:65961911-65961930 Msa0265600:three_prime_UTR 45.0%
GTGCAAGAAACTCATAGGGT+GGG - chr2_2:65962085-65962104 None:intergenic 45.0%
GAGCGTGCAAGAAACTCATA+GGG - chr2_2:65962089-65962108 None:intergenic 45.0%
AGAGCGTGCAAGAAACTCAT+AGG - chr2_2:65962090-65962109 None:intergenic 45.0%
GGAAATGTACCTACTGATGG+GGG + chr2_2:65962281-65962300 Msa0265600:three_prime_UTR 45.0%
TCTTCCTACTCGCGTCTAAA+TGG - chr2_2:65962307-65962326 None:intergenic 45.0%
GATAGTATGCATGAGGTCCT+AGG + chr2_2:65962435-65962454 Msa0265600:three_prime_UTR 45.0%
!!! TTTATTTTTCAAATTATTAT+CGG + chr2_2:65956167-65956186 Msa0265600:intron 5.0%
TGTCGTGTTGGATCCTGACA+CGG - chr2_2:65956117-65956136 None:intergenic 50.0%
TACACGTGTCAGTGTCGTGT+TGG - chr2_2:65956129-65956148 None:intergenic 50.0%
CACCAATGAGTTCCCGAAGA+GGG + chr2_2:65956316-65956335 Msa0265600:CDS 50.0%
TACCCTCTTCGGGAACTCAT+TGG - chr2_2:65956321-65956340 None:intergenic 50.0%
!! TTCCCGAAGAGGGTATCCAT+CGG + chr2_2:65956326-65956345 Msa0265600:CDS 50.0%
TTCCGATGGATACCCTCTTC+GGG - chr2_2:65956331-65956350 None:intergenic 50.0%
CTTCCGATGGATACCCTCTT+CGG - chr2_2:65956332-65956351 None:intergenic 50.0%
! ATATGCTGTCGTGGCATTGG+TGG - chr2_2:65956375-65956394 None:intergenic 50.0%
GGAATATGCTGTCGTGGCAT+TGG - chr2_2:65956378-65956397 None:intergenic 50.0%
TGAGGTGGAATATGCTGTCG+TGG - chr2_2:65956384-65956403 None:intergenic 50.0%
TGCAGCATGCTGAAATGAGG+AGG + chr2_2:65956433-65956452 Msa0265600:CDS 50.0%
CATGGAACAGAGGCAGTCAA+TGG + chr2_2:65956979-65956998 Msa0265600:CDS 50.0%
TTTCTCAACTTCTCGGGCCA+TGG - chr2_2:65957020-65957039 None:intergenic 50.0%
TTCCCACCTCCATATGCAGA+TGG + chr2_2:65957840-65957859 Msa0265600:CDS 50.0%
GTTTAGGCTGCTGCAGAGAA+AGG + chr2_2:65957958-65957977 Msa0265600:intron 50.0%
GAAAGGTCCTCTTTATGGGG+TGG + chr2_2:65957975-65957994 Msa0265600:CDS 50.0%
ATTCAACGACGGTTTGAGCG+AGG - chr2_2:65958030-65958049 None:intergenic 50.0%
AACACAGCTAAAGGGATGGC+AGG - chr2_2:65958084-65958103 None:intergenic 50.0%
CGCTAACACAGCTAAAGGGA+TGG - chr2_2:65958088-65958107 None:intergenic 50.0%
AACTCAGCATTGCAGCCATG+AGG + chr2_2:65958408-65958427 Msa0265600:intron 50.0%
GTGGGAGCTACAAAACCTCA+TGG - chr2_2:65958426-65958445 None:intergenic 50.0%
CAGACATCACCAGCATTCCT+GGG - chr2_2:65958798-65958817 None:intergenic 50.0%
TCAGACATCACCAGCATTCC+TGG - chr2_2:65958799-65958818 None:intergenic 50.0%
! TGTGGTCTTGCAACTGGTGA+AGG + chr2_2:65958841-65958860 Msa0265600:intron 50.0%
! ACTGATGTTTGCTGGCATGG+AGG + chr2_2:65959158-65959177 Msa0265600:intron 50.0%
! CTGATGTTTGCTGGCATGGA+GGG + chr2_2:65959159-65959178 Msa0265600:intron 50.0%
CTGAGATTGAAGTCGGTGGT+AGG + chr2_2:65959494-65959513 Msa0265600:intron 50.0%
GAAGTCGGTGGTAGGGATAT+AGG + chr2_2:65959502-65959521 Msa0265600:intron 50.0%
! TACTGCTGTTTGCTAGAGGG+TGG + chr2_2:65959863-65959882 Msa0265600:intron 50.0%
TAGAGGGTGGCTGTTGTTAG+TGG + chr2_2:65959876-65959895 Msa0265600:intron 50.0%
AGAGGGTGGCTGTTGTTAGT+GGG + chr2_2:65959877-65959896 Msa0265600:intron 50.0%
GGATGGGGAAACCACAAGTA+TGG + chr2_2:65960013-65960032 Msa0265600:intron 50.0%
TTCAAATATTCCACGGGCCC+AGG - chr2_2:65960102-65960121 None:intergenic 50.0%
ATTCGACGGATACTTGGAGC+TGG + chr2_2:65960566-65960585 Msa0265600:intron 50.0%
TGGAGCTGGCTGAAGTTGTA+TGG + chr2_2:65960580-65960599 Msa0265600:intron 50.0%
AGCTGGCTGAAGTTGTATGG+TGG + chr2_2:65960583-65960602 Msa0265600:intron 50.0%
GTTACTGGGCTTCTAATCCG+AGG + chr2_2:65960647-65960666 Msa0265600:intron 50.0%
TGGGCTTCTAATCCGAGGAA+AGG + chr2_2:65960652-65960671 Msa0265600:intron 50.0%
CCTCCACATACTAGGCAAAC+CGG - chr2_2:65961066-65961085 None:intergenic 50.0%
CCCCAAAACCTCCACATACT+AGG - chr2_2:65961074-65961093 None:intergenic 50.0%
TATGGTTGCAGATGGAGAGC+TGG + chr2_2:65961458-65961477 Msa0265600:intron 50.0%
TCGCAGCATTATGGTGTGTG+GGG - chr2_2:65961518-65961537 None:intergenic 50.0%
CTCGCAGCATTATGGTGTGT+GGG - chr2_2:65961519-65961538 None:intergenic 50.0%
TCTCGCAGCATTATGGTGTG+TGG - chr2_2:65961520-65961539 None:intergenic 50.0%
! ATTATGGGCTGAGGGCAAGT+AGG + chr2_2:65961598-65961617 Msa0265600:three_prime_UTR 50.0%
! TTATGGGCTGAGGGCAAGTA+GGG + chr2_2:65961599-65961618 Msa0265600:three_prime_UTR 50.0%
CGTGCAAGAAACTCATAGGG+TGG - chr2_2:65962086-65962105 None:intergenic 50.0%
TCCGAACTTCATAGAGCGTG+CGG + chr2_2:65962189-65962208 Msa0265600:three_prime_UTR 50.0%
TCTAAATGGCCCCCATCAGT+AGG - chr2_2:65962293-65962312 None:intergenic 50.0%
GGAGGTAACGACTTCAACCT+AGG - chr2_2:65962455-65962474 None:intergenic 50.0%
AAGAAGAGGGTCGCGTACGA+TGG - chr2_2:65955795-65955814 None:intergenic 55.0%
ATGGAAGACGTGTCCGTGTC+AGG + chr2_2:65956101-65956120 Msa0265600:intron 55.0%
CCTCTTCGGGAACTCATTGG+TGG - chr2_2:65956318-65956337 None:intergenic 55.0%
CCACCAATGAGTTCCCGAAG+AGG + chr2_2:65956315-65956334 Msa0265600:CDS 55.0%
!! CGAAGAGGGTATCCATCGGA+AGG + chr2_2:65956330-65956349 Msa0265600:CDS 55.0%
CGAGCATAAGGACCTTCCGA+TGG - chr2_2:65956345-65956364 None:intergenic 55.0%
TCGGAAGGTCCTTATGCTCG+CGG + chr2_2:65956345-65956364 Msa0265600:CDS 55.0%
GCATGCTGAAATGAGGAGGC+TGG + chr2_2:65956437-65956456 Msa0265600:CDS 55.0%
TGCTGAAATGAGGAGGCTGG+TGG + chr2_2:65956440-65956459 Msa0265600:CDS 55.0%
TGAAATGAGGAGGCTGGTGG+CGG + chr2_2:65956443-65956462 Msa0265600:CDS 55.0%
ACCAAGAACTGATGCGCGCT+AGG + chr2_2:65956805-65956824 Msa0265600:CDS 55.0%
ACCTAGCGCGCATCAGTTCT+TGG - chr2_2:65956809-65956828 None:intergenic 55.0%
ACTGATGCGCGCTAGGTTTG+TGG + chr2_2:65956812-65956831 Msa0265600:intron 55.0%
!! TCGTGCTGAGCTTGCTAGCA+TGG + chr2_2:65957042-65957061 Msa0265600:CDS 55.0%
!! GCTGAGCTTGCTAGCATGGA+TGG + chr2_2:65957046-65957065 Msa0265600:CDS 55.0%
GATGGAAGACATTGGGGAGC+TGG + chr2_2:65957064-65957083 Msa0265600:CDS 55.0%
! TTGACTGGCAGTGTTGAGGG+TGG + chr2_2:65957556-65957575 Msa0265600:intron 55.0%
GCAGTACCCACCCCATAAAG+AGG - chr2_2:65957985-65958004 None:intergenic 55.0%
! ATGGGGTGGGTACTGCTTCT+AGG + chr2_2:65957989-65958008 Msa0265600:CDS 55.0%
!! TGGTGTTGCCGTTTGTGCTC+TGG + chr2_2:65958525-65958544 Msa0265600:intron 55.0%
ACTGTCGGAGAAGTCACCAC+CGG + chr2_2:65958648-65958667 Msa0265600:intron 55.0%
! ATGTTTGCTGGCATGGAGGG+TGG + chr2_2:65959162-65959181 Msa0265600:intron 55.0%
TATGTTAGAAGGCCGGTGCC+TGG + chr2_2:65960081-65960100 Msa0265600:intron 55.0%
ATGTTAGAAGGCCGGTGCCT+GGG + chr2_2:65960082-65960101 Msa0265600:intron 55.0%
CCACATACTAGGCAAACCGG+TGG - chr2_2:65961063-65961082 None:intergenic 55.0%
!! CCACCGGTTTGCCTAGTATG+TGG + chr2_2:65961060-65961079 Msa0265600:intron 55.0%
! CCGGTTTGCCTAGTATGTGG+AGG + chr2_2:65961063-65961082 Msa0265600:intron 55.0%
CCCGCACGCTCTATGAAGTT+CGG - chr2_2:65962193-65962212 None:intergenic 55.0%
CCGAACTTCATAGAGCGTGC+GGG + chr2_2:65962190-65962209 Msa0265600:three_prime_UTR 55.0%
AGAGCGTGCGGGAAACTCAT+AGG + chr2_2:65962201-65962220 Msa0265600:three_prime_UTR 55.0%
CGTGCGGGAAACTCATAGGT+TGG + chr2_2:65962205-65962224 Msa0265600:three_prime_UTR 55.0%
CGGAAGGTCCTTATGCTCGC+GGG + chr2_2:65956346-65956365 Msa0265600:CDS 60.0%
!! TGCTGTCGTGGCATTGGTGG+TGG - chr2_2:65956372-65956391 None:intergenic 60.0%
AGACCTTGCAGCTGCGAAGG+AGG + chr2_2:65956506-65956525 Msa0265600:CDS 60.0%
! ACTGGCAGTGTTGAGGGTGG+TGG + chr2_2:65957559-65957578 Msa0265600:intron 60.0%
! GAGGGTGGTGGTATCCCACA+AGG + chr2_2:65957571-65957590 Msa0265600:intron 60.0%
CTGAGGGCAAGTAGGGCACA+GGG + chr2_2:65961606-65961625 Msa0265600:three_prime_UTR 60.0%
GGGGCCATTTAGACGCGAGT+AGG + chr2_2:65962300-65962319 Msa0265600:three_prime_UTR 60.0%
!! GGAGGCTGGTGGCGGATAAC+AGG + chr2_2:65956451-65956470 Msa0265600:CDS 65.0%
!! GGCTGGTGGCGGATAACAGG+AGG + chr2_2:65956454-65956473 Msa0265600:CDS 65.0%
GCGAGACCTTGCAGCTGCGA+AGG + chr2_2:65956503-65956522 Msa0265600:CDS 65.0%
GCTCCTCCTTCGCAGCTGCA+AGG - chr2_2:65956512-65956531 None:intergenic 65.0%
GGAGAAGTCACCACCGGTGC+AGG + chr2_2:65958654-65958673 Msa0265600:intron 65.0%
TTGCTGGCATGGAGGGTGGC+TGG + chr2_2:65959166-65959185 Msa0265600:intron 65.0%
TATTCCACGGGCCCAGGCAC+CGG - chr2_2:65960096-65960115 None:intergenic 65.0%
GCTGAGGGCAAGTAGGGCAC+AGG + chr2_2:65961605-65961624 Msa0265600:three_prime_UTR 65.0%
! GGTGGTGGCCCGCGAGCATA+AGG - chr2_2:65956357-65956376 None:intergenic 70.0%
GGAGGTGGGAAACCCCCCTC+TGG - chr2_2:65957831-65957850 None:intergenic 70.0%
! AAGGCCGGTGCCTGGGCCCG+TGG + chr2_2:65960089-65960108 Msa0265600:intron 80.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 65955712 65962522 65955712 ID=Msa0265600;Name=Msa0265600
chr2_2 mRNA 65955712 65962522 65955712 ID=Msa0265600-mRNA-1;Parent=Msa0265600;Name=Msa0265600-mRNA-1;_AED=0.04;_eAED=0.04;_QI=170|1|1|1|0.6|0.5|6|1154|283
chr2_2 exon 65955712 65955871 65955712 ID=Msa0265600-mRNA-1:exon:20788;Parent=Msa0265600-mRNA-1
chr2_2 exon 65956275 65956826 65956275 ID=Msa0265600-mRNA-1:exon:20789;Parent=Msa0265600-mRNA-1
chr2_2 exon 65956940 65957085 65956940 ID=Msa0265600-mRNA-1:exon:20790;Parent=Msa0265600-mRNA-1
chr2_2 exon 65957799 65957878 65957799 ID=Msa0265600-mRNA-1:exon:20791;Parent=Msa0265600-mRNA-1
chr2_2 exon 65957964 65958147 65957964 ID=Msa0265600-mRNA-1:exon:20792;Parent=Msa0265600-mRNA-1
chr2_2 exon 65961469 65962522 65961469 ID=Msa0265600-mRNA-1:exon:20793;Parent=Msa0265600-mRNA-1
chr2_2 five_prime_UTR 65955712 65955871 65955712 ID=Msa0265600-mRNA-1:five_prime_utr;Parent=Msa0265600-mRNA-1
chr2_2 five_prime_UTR 65956275 65956284 65956275 ID=Msa0265600-mRNA-1:five_prime_utr;Parent=Msa0265600-mRNA-1
chr2_2 CDS 65956285 65956826 65956285 ID=Msa0265600-mRNA-1:cds;Parent=Msa0265600-mRNA-1
chr2_2 CDS 65956940 65957085 65956940 ID=Msa0265600-mRNA-1:cds;Parent=Msa0265600-mRNA-1
chr2_2 CDS 65957799 65957878 65957799 ID=Msa0265600-mRNA-1:cds;Parent=Msa0265600-mRNA-1
chr2_2 CDS 65957964 65958047 65957964 ID=Msa0265600-mRNA-1:cds;Parent=Msa0265600-mRNA-1
chr2_2 three_prime_UTR 65958048 65958147 65958048 ID=Msa0265600-mRNA-1:three_prime_utr;Parent=Msa0265600-mRNA-1
chr2_2 three_prime_UTR 65961469 65962522 65961469 ID=Msa0265600-mRNA-1:three_prime_utr;Parent=Msa0265600-mRNA-1
Gene Sequence

>Msa0265600

ATGGGATCAAGACACCGTGTTCATAGAGAGCCACCAATGAGTTCCCGAAGAGGGTATCCATCGGAAGGTCCTTATGCTCGCGGGCCACCACCAATGCCACGACAGCATATTCCACCTCATCCAGCATTGTTAGAGGAAGAGCTTGAAGTGCAGCATGCTGAAATGAGGAGGCTGGTGGCGGATAACAGGAGGTTGATTGATGATCGGATGACGTTGCAGCGAGACCTTGCAGCTGCGAAGGAGGAGCTTCATCGTATGAATTTAGCGATTGGCGATATTCGTGCTGAACATGAGATGCATTCGAGGGAGCTTGTTGATAAAAATATGAAGTTGGAGTCTGATCTTAGGTCGACTGAGCCGTTGAAGAATGAAGTTATACAACTGCGAGCTGAAGTTCAAAAACTTAGTAGTATCAAACAAGAACTTTCTGGGAAGGTCCAGACACTTACGAAAGATGTTTCTAGGTTACAGTCTGATAATCAACAAATTCCTTCAATGAGATCTGAGATTGATGGTTTGCACCAAGAACTGATGCGCGCTAGAACTATGGTGGATTATGAAAAGAAGGCAAACATGGAGTTCATGGAACAGAGGCAGTCAATGGAGAAAAACATGGTTTCCATGGCCCGAGAAGTTGAGAAACTTCGTGCTGAGCTTGCTAGCATGGATGGAAGACATTGGGGAGCTGGTTTGCCTTATGGAACAAATTTTGGTAGTCCAGAGGGGGGTTTCCCACCTCCATATGCAGATGGATATGGTGTTCACATGGCTGCTGCAGAGAAAGGTCCTCTTTATGGGGTGGGTACTGCTTCTAGGAAAGCACACGAGAAGCCTCGCTCAAACCGTCGTTGA
Protein sequence

>Msa0265600

MGSRHRVHREPPMSSRRGYPSEGPYARGPPPMPRQHIPPHPALLEEELEVQHAEMRRLVADNRRLIDDRMTLQRDLAAAKEELHRMNLAIGDIRAEHEMHSRELVDKNMKLESDLRSTEPLKNEVIQLRAEVQKLSSIKQELSGKVQTLTKDVSRLQSDNQQIPSMRSEIDGLHQELMRARTMVDYEKKANMEFMEQRQSMEKNMVSMAREVEKLRAELASMDGRHWGAGLPYGTNFGSPEGGFPPPYADGYGVHMAAAEKGPLYGVGTASRKAHEKPRSNRR*