Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300340 | G7JT57 | 91.724 | 145 | 9 | 2 | 1 | 142 | 1 | 145 | 1.64e-56 | 182 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1300340 | 0.805407 | 1.354952e-49 | -8.615850e-47 |
| Msa0006110 | Msa1300340 | 0.804292 | 2.317446e-49 | -8.615850e-47 |
| Msa0017510 | Msa1300340 | 0.822914 | 1.835122e-53 | -8.615850e-47 |
| Msa0024210 | Msa1300340 | -0.832420 | 9.548487e-56 | -8.615850e-47 |
| Msa0024550 | Msa1300340 | 0.802658 | 5.054874e-49 | -8.615850e-47 |
| Msa0052680 | Msa1300340 | 0.800187 | 1.621428e-48 | -8.615850e-47 |
| Msa0075470 | Msa1300340 | 0.809995 | 1.436392e-50 | -8.615850e-47 |
| Msa0076250 | Msa1300340 | 0.804867 | 1.757466e-49 | -8.615850e-47 |
| Msa0083280 | Msa1300340 | 0.808192 | 3.494754e-50 | -8.615850e-47 |
| Msa0084080 | Msa1300340 | 0.809556 | 1.784993e-50 | -8.615850e-47 |
| Msa0084380 | Msa1300340 | 0.829336 | 5.450165e-55 | -8.615850e-47 |
| Msa0087800 | Msa1300340 | 0.816517 | 5.310524e-52 | -8.615850e-47 |
| Msa0090360 | Msa1300340 | 0.828831 | 7.224298e-55 | -8.615850e-47 |
| Msa0095560 | Msa1300340 | 0.820242 | 7.605319e-53 | -8.615850e-47 |
| Msa0112750 | Msa1300340 | 0.802128 | 6.496612e-49 | -8.615850e-47 |
| Msa0114060 | Msa1300340 | 0.807200 | 5.676434e-50 | -8.615850e-47 |
| Msa0120010 | Msa1300340 | -0.824351 | 8.458696e-54 | -8.615850e-47 |
| Msa0120020 | Msa1300340 | -0.826344 | 2.856867e-54 | -8.615850e-47 |
| Msa0120040 | Msa1300340 | -0.813952 | 1.972284e-51 | -8.615850e-47 |
| Msa0120400 | Msa1300340 | 0.810072 | 1.382359e-50 | -8.615850e-47 |
| Msa0607580 | Msa1300340 | 0.817318 | 3.508924e-52 | -8.615850e-47 |
| Msa0617640 | Msa1300340 | 0.812190 | 4.803024e-51 | -8.615850e-47 |
| Msa0620910 | Msa1300340 | 0.807186 | 5.715379e-50 | -8.615850e-47 |
| Msa0624470 | Msa1300340 | 0.802756 | 4.824646e-49 | -8.615850e-47 |
| Msa0625720 | Msa1300340 | 0.832505 | 9.098654e-56 | -8.615850e-47 |
| Msa0627450 | Msa1300340 | 0.819998 | 8.651937e-53 | -8.615850e-47 |
| Msa0629450 | Msa1300340 | 0.810051 | 1.396768e-50 | -8.615850e-47 |
| Msa0631360 | Msa1300340 | 0.800438 | 1.440989e-48 | -8.615850e-47 |
| Msa0643080 | Msa1300340 | 0.818209 | 2.208245e-52 | -8.615850e-47 |
| Msa0648880 | Msa1300340 | 0.810955 | 8.911702e-51 | -8.615850e-47 |
| Msa0657970 | Msa1300340 | 0.802508 | 5.426176e-49 | -8.615850e-47 |
| Msa0663390 | Msa1300340 | 0.835948 | 1.246099e-56 | -8.615850e-47 |
| Msa0667050 | Msa1300340 | 0.831056 | 2.072601e-55 | -8.615850e-47 |
| Msa0683510 | Msa1300340 | 0.808430 | 3.109807e-50 | -8.615850e-47 |
| Msa0690860 | Msa1300340 | 0.808002 | 3.836489e-50 | -8.615850e-47 |
| Msa0691380 | Msa1300340 | 0.825162 | 5.446722e-54 | -8.615850e-47 |
| Msa0692040 | Msa1300340 | -0.801399 | 9.170719e-49 | -8.615850e-47 |
| Msa0721280 | Msa1300340 | 0.809430 | 1.899650e-50 | -8.615850e-47 |
| Msa0721970 | Msa1300340 | 0.803141 | 4.017024e-49 | -8.615850e-47 |
| Msa0724210 | Msa1300340 | 0.802028 | 6.813760e-49 | -8.615850e-47 |
| Msa0727710 | Msa1300340 | 0.809837 | 1.553131e-50 | -8.615850e-47 |
| Msa0731940 | Msa1300340 | 0.820118 | 8.122022e-53 | -8.615850e-47 |
| Msa0740510 | Msa1300340 | 0.824722 | 6.918181e-54 | -8.615850e-47 |
| Msa0762970 | Msa1300340 | 0.814746 | 1.316974e-51 | -8.615850e-47 |
| Msa0769920 | Msa1300340 | 0.820488 | 6.680896e-53 | -8.615850e-47 |
| Msa0780270 | Msa1300340 | 0.802537 | 5.353206e-49 | -8.615850e-47 |
| Msa0810220 | Msa1300340 | 0.826061 | 3.336019e-54 | -8.615850e-47 |
| Msa0820770 | Msa1300340 | 0.821082 | 4.876469e-53 | -8.615850e-47 |
| Msa0822870 | Msa1300340 | 0.829655 | 4.559354e-55 | -8.615850e-47 |
| Msa0828560 | Msa1300340 | 0.805783 | 1.130158e-49 | -8.615850e-47 |
| Msa0832340 | Msa1300340 | 0.826385 | 2.793418e-54 | -8.615850e-47 |
| Msa0123300 | Msa1300340 | 0.801096 | 1.057731e-48 | -8.615850e-47 |
| Msa0137840 | Msa1300340 | 0.816198 | 6.257429e-52 | -8.615850e-47 |
| Msa0140780 | Msa1300340 | 0.802442 | 5.600464e-49 | -8.615850e-47 |
| Msa0157290 | Msa1300340 | 0.823825 | 1.124135e-53 | -8.615850e-47 |
| Msa0159930 | Msa1300340 | 0.812864 | 3.420815e-51 | -8.615850e-47 |
| Msa0170570 | Msa1300340 | 0.806979 | 6.323018e-50 | -8.615850e-47 |
| Msa0171120 | Msa1300340 | 0.813596 | 2.362555e-51 | -8.615850e-47 |
| Msa0173390 | Msa1300340 | 0.808311 | 3.296798e-50 | -8.615850e-47 |
| Msa0183050 | Msa1300340 | 0.807481 | 4.948897e-50 | -8.615850e-47 |
| Msa0184040 | Msa1300340 | 0.826488 | 2.640003e-54 | -8.615850e-47 |
| Msa0188150 | Msa1300340 | 0.813390 | 2.623082e-51 | -8.615850e-47 |
| Msa0205230 | Msa1300340 | 0.801938 | 7.110053e-49 | -8.615850e-47 |
| Msa0211150 | Msa1300340 | 0.812367 | 4.393974e-51 | -8.615850e-47 |
| Msa0216240 | Msa1300340 | 0.800173 | 1.631913e-48 | -8.615850e-47 |
| Msa0218810 | Msa1300340 | 0.804469 | 2.128429e-49 | -8.615850e-47 |
| Msa0222620 | Msa1300340 | 0.810297 | 1.236551e-50 | -8.615850e-47 |
| Msa1260480 | Msa1300340 | 0.868121 | 8.260777e-66 | -8.615850e-47 |
| Msa1267900 | Msa1300340 | 0.810547 | 1.091647e-50 | -8.615850e-47 |
| Msa1284550 | Msa1300340 | 0.826147 | 3.181454e-54 | -8.615850e-47 |
| Msa1297290 | Msa1300340 | 0.807923 | 3.988104e-50 | -8.615850e-47 |
| Msa1298370 | Msa1300340 | 0.817140 | 3.849118e-52 | -8.615850e-47 |
| Msa1300340 | Msa1303240 | 0.811443 | 6.984185e-51 | -8.615850e-47 |
| Msa1300340 | Msa1303250 | 0.815984 | 6.987364e-52 | -8.615850e-47 |
| Msa1300340 | Msa1306840 | 0.815070 | 1.116040e-51 | -8.615850e-47 |
| Msa1300340 | Msa1309030 | 0.807136 | 5.856062e-50 | -8.615850e-47 |
| Msa1300340 | Msa1327680 | 0.812736 | 3.649104e-51 | -8.615850e-47 |
| Msa1300340 | Msa1328710 | 0.811635 | 6.344622e-51 | -8.615850e-47 |
| Msa1300340 | Msa1346280 | 0.812496 | 4.117226e-51 | -8.615850e-47 |
| Msa1300340 | Msa1348890 | 0.800947 | 1.134638e-48 | -8.615850e-47 |
| Msa1300340 | Msa1353980 | 0.845793 | 3.254639e-59 | -8.615850e-47 |
| Msa1300340 | Msa1357890 | 0.808704 | 2.716862e-50 | -8.615850e-47 |
| Msa1300340 | Msa1361410 | 0.801312 | 9.556797e-49 | -8.615850e-47 |
| Msa1300340 | Msa1369000 | 0.807691 | 4.465946e-50 | -8.615850e-47 |
| Msa1300340 | Msa1370070 | -0.804496 | 2.100744e-49 | -8.615850e-47 |
| Msa1300340 | Msa1373030 | 0.809252 | 2.073903e-50 | -8.615850e-47 |
| Msa1300340 | Msa1374470 | 0.807605 | 4.657614e-50 | -8.615850e-47 |
| Msa1300340 | Msa1385000 | 0.807772 | 4.293524e-50 | -8.615850e-47 |
| Msa1300340 | Msa1390700 | 0.823422 | 1.397075e-53 | -8.615850e-47 |
| Msa1300340 | Msa1392910 | 0.816075 | 6.666957e-52 | -8.615850e-47 |
| Msa1300340 | Msa1397120 | 0.805325 | 1.409794e-49 | -8.615850e-47 |
| Msa1300340 | Msa1398090 | 0.806204 | 9.216120e-50 | -8.615850e-47 |
| Msa1300340 | Msa1402400 | 0.821689 | 3.532997e-53 | -8.615850e-47 |
| Msa1300340 | Msa1403890 | 0.804875 | 1.750941e-49 | -8.615850e-47 |
| Msa1300340 | Msa1404300 | 0.826760 | 2.273443e-54 | -8.615850e-47 |
| Msa1300340 | Msa1407580 | 0.823367 | 1.439306e-53 | -8.615850e-47 |
| Msa1300340 | Msa1416370 | 0.813439 | 2.557950e-51 | -8.615850e-47 |
| Msa1300340 | Msa1433390 | 0.829587 | 4.734951e-55 | -8.615850e-47 |
| Msa1300340 | Msa1437180 | 0.802390 | 5.740147e-49 | -8.615850e-47 |
| Msa1300340 | Msa1437560 | 0.809562 | 1.779584e-50 | -8.615850e-47 |
| Msa1300340 | Msa1440880 | 0.801448 | 8.960216e-49 | -8.615850e-47 |
| Msa1300340 | Msa1443850 | 0.812608 | 3.891936e-51 | -8.615850e-47 |
| Msa1300340 | Msa1449340 | -0.802523 | 5.388173e-49 | -8.615850e-47 |
| Msa1300340 | Msa1451160 | 0.835728 | 1.416768e-56 | -8.615850e-47 |
| Msa1300340 | Msa1466540 | 0.849055 | 4.134493e-60 | -8.615850e-47 |
| Msa0367870 | Msa1300340 | 0.803194 | 3.916964e-49 | -8.615850e-47 |
| Msa0376350 | Msa1300340 | 0.810460 | 1.139949e-50 | -8.615850e-47 |
| Msa0381610 | Msa1300340 | -0.800761 | 1.238177e-48 | -8.615850e-47 |
| Msa0393080 | Msa1300340 | 0.818290 | 2.117089e-52 | -8.615850e-47 |
| Msa0410650 | Msa1300340 | 0.814639 | 1.390675e-51 | -8.615850e-47 |
| Msa0424790 | Msa1300340 | 0.810704 | 1.009546e-50 | -8.615850e-47 |
| Msa0426900 | Msa1300340 | 0.814111 | 1.819018e-51 | -8.615850e-47 |
| Msa0427040 | Msa1300340 | 0.804738 | 1.870669e-49 | -8.615850e-47 |
| Msa0437560 | Msa1300340 | 0.801302 | 9.600300e-49 | -8.615850e-47 |
| Msa0440750 | Msa1300340 | 0.820914 | 5.332398e-53 | -8.615850e-47 |
| Msa0453350 | Msa1300340 | 0.803564 | 3.281740e-49 | -8.615850e-47 |
| Msa0464680 | Msa1300340 | 0.808426 | 3.115609e-50 | -8.615850e-47 |
| Msa0479170 | Msa1300340 | 0.804862 | 1.761682e-49 | -8.615850e-47 |
| Msa0479970 | Msa1300340 | 0.828875 | 7.048010e-55 | -8.615850e-47 |
| Msa0481530 | Msa1300340 | 0.835318 | 1.799094e-56 | -8.615850e-47 |
| Msa0997970 | Msa1300340 | 0.818374 | 2.026470e-52 | -8.615850e-47 |
| Msa1019000 | Msa1300340 | 0.802419 | 5.661697e-49 | -8.615850e-47 |
| Msa1019430 | Msa1300340 | 0.819593 | 1.070422e-52 | -8.615850e-47 |
| Msa1019470 | Msa1300340 | 0.827475 | 1.532997e-54 | -8.615850e-47 |
| Msa1023920 | Msa1300340 | 0.804084 | 2.559547e-49 | -8.615850e-47 |
| Msa1041670 | Msa1300340 | 0.826912 | 2.090984e-54 | -8.615850e-47 |
| Msa1043370 | Msa1300340 | 0.803334 | 3.663024e-49 | -8.615850e-47 |
| Msa1051770 | Msa1300340 | 0.802275 | 6.060663e-49 | -8.615850e-47 |
| Msa1078170 | Msa1300340 | 0.831113 | 2.006663e-55 | -8.615850e-47 |
| Msa1081330 | Msa1300340 | 0.807015 | 6.211600e-50 | -8.615850e-47 |
| Msa1085200 | Msa1300340 | 0.816006 | 6.908101e-52 | -8.615850e-47 |
| Msa1093840 | Msa1300340 | 0.820715 | 5.924532e-53 | -8.615850e-47 |
| Msa1102770 | Msa1300340 | 0.808942 | 2.416582e-50 | -8.615850e-47 |
| Msa0243100 | Msa1300340 | 0.827845 | 1.249085e-54 | -8.615850e-47 |
| Msa0254790 | Msa1300340 | 0.804632 | 1.968067e-49 | -8.615850e-47 |
| Msa0258310 | Msa1300340 | 0.819210 | 1.308642e-52 | -8.615850e-47 |
| Msa0259210 | Msa1300340 | 0.804836 | 1.784025e-49 | -8.615850e-47 |
| Msa0259430 | Msa1300340 | 0.814109 | 1.821000e-51 | -8.615850e-47 |
| Msa0259500 | Msa1300340 | 0.834759 | 2.488671e-56 | -8.615850e-47 |
| Msa0260780 | Msa1300340 | 0.826610 | 2.468844e-54 | -8.615850e-47 |
| Msa0264150 | Msa1300340 | 0.816530 | 5.273077e-52 | -8.615850e-47 |
| Msa0287650 | Msa1300340 | 0.829809 | 4.181932e-55 | -8.615850e-47 |
| Msa0297790 | Msa1300340 | 0.811270 | 7.614804e-51 | -8.615850e-47 |
| Msa0305610 | Msa1300340 | 0.813252 | 2.812425e-51 | -8.615850e-47 |
| Msa0305700 | Msa1300340 | 0.825492 | 4.550484e-54 | -8.615850e-47 |
| Msa0306210 | Msa1300340 | -0.811689 | 6.175729e-51 | -8.615850e-47 |
| Msa0319170 | Msa1300340 | 0.802107 | 6.563468e-49 | -8.615850e-47 |
| Msa0326110 | Msa1300340 | 0.800155 | 1.645543e-48 | -8.615850e-47 |
| Msa0335800 | Msa1300340 | 0.807089 | 5.994256e-50 | -8.615850e-47 |
| Msa0336290 | Msa1300340 | 0.801279 | 9.704689e-49 | -8.615850e-47 |
| Msa0336320 | Msa1300340 | 0.825490 | 4.555216e-54 | -8.615850e-47 |
| Msa0339250 | Msa1300340 | 0.801909 | 7.209379e-49 | -8.615850e-47 |
| Msa0341540 | Msa1300340 | 0.826812 | 2.209440e-54 | -8.615850e-47 |
| Msa0345970 | Msa1300340 | 0.824482 | 7.879527e-54 | -8.615850e-47 |
| Msa0357340 | Msa1300340 | 0.814953 | 1.184687e-51 | -8.615850e-47 |
| Msa0363790 | Msa1300340 | 0.812497 | 4.114552e-51 | -8.615850e-47 |
| Msa1107900 | Msa1300340 | 0.801540 | 8.579747e-49 | -8.615850e-47 |
| Msa1113170 | Msa1300340 | 0.802977 | 4.342393e-49 | -8.615850e-47 |
| Msa1121440 | Msa1300340 | 0.800211 | 1.603158e-48 | -8.615850e-47 |
| Msa1123380 | Msa1300340 | 0.819212 | 1.307317e-52 | -8.615850e-47 |
| Msa1137570 | Msa1300340 | 0.813024 | 3.155036e-51 | -8.615850e-47 |
| Msa1139890 | Msa1300340 | 0.813608 | 2.347907e-51 | -8.615850e-47 |
| Msa1145810 | Msa1300340 | 0.801107 | 1.052310e-48 | -8.615850e-47 |
| Msa1147970 | Msa1300340 | 0.801011 | 1.101203e-48 | -8.615850e-47 |
| Msa1166560 | Msa1300340 | 0.820452 | 6.809376e-53 | -8.615850e-47 |
| Msa1167340 | Msa1300340 | 0.819867 | 9.271048e-53 | -8.615850e-47 |
| Msa1169550 | Msa1300340 | 0.802023 | 6.827839e-49 | -8.615850e-47 |
| Msa1173100 | Msa1300340 | 0.803731 | 3.030366e-49 | -8.615850e-47 |
| Msa1189070 | Msa1300340 | 0.820456 | 6.794366e-53 | -8.615850e-47 |
| Msa1193170 | Msa1300340 | 0.809932 | 1.481846e-50 | -8.615850e-47 |
| Msa1193290 | Msa1300340 | 0.828889 | 6.994788e-55 | -8.615850e-47 |
| Msa1199570 | Msa1300340 | 0.805607 | 1.230191e-49 | -8.615850e-47 |
| Msa1221050 | Msa1300340 | 0.801384 | 9.234125e-49 | -8.615850e-47 |
| Msa1221060 | Msa1300340 | 0.809002 | 2.346501e-50 | -8.615850e-47 |
| Msa0488560 | Msa1300340 | 0.814431 | 1.545744e-51 | -8.615850e-47 |
| Msa0504610 | Msa1300340 | 0.805666 | 1.195547e-49 | -8.615850e-47 |
| Msa0507680 | Msa1300340 | 0.810404 | 1.172482e-50 | -8.615850e-47 |
| Msa0510930 | Msa1300340 | 0.804849 | 1.773065e-49 | -8.615850e-47 |
| Msa0516170 | Msa1300340 | 0.802452 | 5.572638e-49 | -8.615850e-47 |
| Msa0529890 | Msa1300340 | 0.836300 | 1.014345e-56 | -8.615850e-47 |
| Msa0534910 | Msa1300340 | 0.804859 | 1.764597e-49 | -8.615850e-47 |
| Msa0547230 | Msa1300340 | 0.817697 | 2.882383e-52 | -8.615850e-47 |
| Msa0557320 | Msa1300340 | 0.815469 | 9.098976e-52 | -8.615850e-47 |
| Msa0563840 | Msa1300340 | 0.802058 | 6.716935e-49 | -8.615850e-47 |
| Msa0577500 | Msa1300340 | 0.815836 | 7.536475e-52 | -8.615850e-47 |
| Msa0585300 | Msa1300340 | 0.800730 | 1.256804e-48 | -8.615850e-47 |
| Msa0585560 | Msa1300340 | 0.834636 | 2.673547e-56 | -8.615850e-47 |
| Msa0590990 | Msa1300340 | 0.805754 | 1.145676e-49 | -8.615850e-47 |
| Msa0602460 | Msa1300340 | 0.803919 | 2.769658e-49 | -8.615850e-47 |
| Msa0843780 | Msa1300340 | -0.813992 | 1.932396e-51 | -8.615850e-47 |
| Msa0844570 | Msa1300340 | 0.807682 | 4.486167e-50 | -8.615850e-47 |
| Msa0861090 | Msa1300340 | 0.821876 | 3.197297e-53 | -8.615850e-47 |
| Msa0866410 | Msa1300340 | 0.809410 | 1.918709e-50 | -8.615850e-47 |
| Msa0880140 | Msa1300340 | 0.818453 | 1.944874e-52 | -8.615850e-47 |
| Msa0897330 | Msa1300340 | 0.802283 | 6.038827e-49 | -8.615850e-47 |
| Msa0898750 | Msa1300340 | 0.835995 | 1.212898e-56 | -8.615850e-47 |
| Msa0899980 | Msa1300340 | 0.807202 | 5.672412e-50 | -8.615850e-47 |
| Msa0926890 | Msa1300340 | 0.801025 | 1.093638e-48 | -8.615850e-47 |
| Msa0928130 | Msa1300340 | 0.831756 | 1.394012e-55 | -8.615850e-47 |
| Msa0930860 | Msa1300340 | 0.823186 | 1.586216e-53 | -8.615850e-47 |
| Msa0933100 | Msa1300340 | 0.809947 | 1.470876e-50 | -8.615850e-47 |
| Msa0934140 | Msa1300340 | 0.809166 | 2.163805e-50 | -8.615850e-47 |
| Msa0941190 | Msa1300340 | 0.802945 | 4.408357e-49 | -8.615850e-47 |
| Msa0947660 | Msa1300340 | 0.811100 | 8.289019e-51 | -8.615850e-47 |
| Msa0964310 | Msa1300340 | 0.835087 | 2.057997e-56 | -8.615850e-47 |
| Msa0967380 | Msa1300340 | 0.827970 | 1.165887e-54 | -8.615850e-47 |
| Msa0969450 | Msa1300340 | 0.803671 | 3.119243e-49 | -8.615850e-47 |
| Msa0969520 | Msa1300340 | 0.832863 | 7.415477e-56 | -8.615850e-47 |
| Msa0969810 | Msa1300340 | 0.804467 | 2.130270e-49 | -8.615850e-47 |
| Msa0974070 | Msa1300340 | 0.813009 | 3.179223e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300340 | MtrunA17_Chr4g0061891 | 91.724 | 145 | 9 | 2 | 1 | 142 | 1 | 145 | 3.15e-60 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 46 sgRNAs with CRISPR-Local
Find 175 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGTTTCTGATGCTTCTTC+TGG | 0.144324 | 8_3:-61861598 | Msa1300340:CDS |
| TAACTGCAAAGATCACTTAT+TGG | 0.218669 | 8_3:+61862639 | None:intergenic |
| CGACGAGACAAAAGAATTAA+AGG | 0.244039 | 8_3:-61862543 | Msa1300340:five_prime_UTR |
| TCATCACTTTCATCATCTTC+TGG | 0.273861 | 8_3:+61861625 | None:intergenic |
| ACTTATTCATTACCTTATTT+AGG | 0.287012 | 8_3:+61862511 | None:intergenic |
| TCTTTCCCATGTTGATGAAT+TGG | 0.331949 | 8_3:+61861574 | None:intergenic |
| CATCAACATGGGAAAGACTA+TGG | 0.333345 | 8_3:-61861568 | Msa1300340:CDS |
| TAAAGGCAAGCCTTCAGTTC+AGG | 0.341571 | 8_3:-61861395 | Msa1300340:CDS |
| TCTGGATGGACCATGTATAT+TGG | 0.342364 | 8_3:-61861721 | Msa1300340:CDS |
| TGGTTTCTGATGCTTCTTCT+GGG | 0.357913 | 8_3:-61861597 | Msa1300340:CDS |
| TCAGTTCAGGGTGGTGGCAA+GGG | 0.368073 | 8_3:-61861382 | Msa1300340:CDS |
| GACGAGACAAAAGAATTAAA+GGG | 0.381290 | 8_3:-61862542 | Msa1300340:five_prime_UTR |
| GATCACTTATTGGTTGTTGT+TGG | 0.390044 | 8_3:+61862649 | None:intergenic |
| AGGGGTTTGAGACCTAAATA+AGG | 0.393291 | 8_3:-61862523 | Msa1300340:intron |
| CTGGATGGACCATGTATATT+GGG | 0.393689 | 8_3:-61861720 | Msa1300340:CDS |
| CTTATTGGTTGTTGTTGGAT+TGG | 0.395136 | 8_3:+61862654 | None:intergenic |
| GAATGTGAAAGCAGTGAATC+TGG | 0.408814 | 8_3:-61861739 | Msa1300340:CDS |
| TGATGAAAGTGATGATTCTA+TGG | 0.423100 | 8_3:-61861617 | Msa1300340:CDS |
| GTGGTGGCAAGGGGAGAAAA+AGG | 0.440492 | 8_3:-61861372 | Msa1300340:CDS |
| TTCAGTTCAGGGTGGTGGCA+AGG | 0.451207 | 8_3:-61861383 | Msa1300340:CDS |
| AAAGGCAAGCCTTCAGTTCA+GGG | 0.498524 | 8_3:-61861394 | Msa1300340:CDS |
| CAACCACTTATGCTAGATTC+CGG | 0.504367 | 8_3:-61861276 | Msa1300340:three_prime_UTR |
| GCAAAAGAACGGAAAGAAAG+TGG | 0.505274 | 8_3:-61861452 | Msa1300340:CDS |
| TTGCCACCACCCTGAACTGA+AGG | 0.505883 | 8_3:+61861385 | None:intergenic |
| TGCAAAATCCAACGGGAGAG+TGG | 0.506236 | 8_3:+61862604 | None:intergenic |
| TTTGCAGATGGTAATGCTAA+AGG | 0.517924 | 8_3:-61861412 | Msa1300340:CDS |
| CATCACTATCATCTTCTATG+TGG | 0.530187 | 8_3:+61861695 | None:intergenic |
| TCACCGGAATCTAGCATAAG+TGG | 0.531291 | 8_3:+61861273 | None:intergenic |
| ATTGATAACATGGATGATGA+AGG | 0.534994 | 8_3:-61861667 | Msa1300340:CDS |
| AAGCCTTCAGTTCAGGGTGG+TGG | 0.535858 | 8_3:-61861388 | Msa1300340:CDS |
| CAGTTCAGGGTGGTGGCAAG+GGG | 0.546581 | 8_3:-61861381 | Msa1300340:CDS |
| ATCACTATCATCTTCTATGT+GGG | 0.557807 | 8_3:+61861696 | None:intergenic |
| TCTGGGCCAATTCATCAACA+TGG | 0.567963 | 8_3:-61861580 | Msa1300340:CDS |
| CACATAGAAGATGATAGTGA+TGG | 0.575886 | 8_3:-61861694 | Msa1300340:CDS |
| TGATGGAGATATTGATAACA+TGG | 0.587302 | 8_3:-61861677 | Msa1300340:CDS |
| ACGAGACAAAAGAATTAAAG+GGG | 0.596115 | 8_3:-61862541 | Msa1300340:five_prime_UTR |
| TAGTAACTCCACTCTCCCGT+TGG | 0.596560 | 8_3:-61862612 | Msa1300340:five_prime_UTR |
| AGACTATGGTTTCAAGCAAG+TGG | 0.606860 | 8_3:-61861554 | Msa1300340:CDS |
| AAAGAGAAGAAGTTTGCAGA+TGG | 0.612808 | 8_3:-61861424 | Msa1300340:CDS |
| CGGAATCTAGCATAAGTGGT+TGG | 0.613037 | 8_3:+61861277 | None:intergenic |
| TATGTGGGACCCAATATACA+TGG | 0.618706 | 8_3:+61861711 | None:intergenic |
| GTGAAAGCAGTGAATCTGGA+TGG | 0.629063 | 8_3:-61861735 | Msa1300340:CDS |
| CTGGGCCAATTCATCAACAT+GGG | 0.629727 | 8_3:-61861579 | Msa1300340:CDS |
| CTATGGTTTCAAGCAAGTGG+TGG | 0.638759 | 8_3:-61861551 | Msa1300340:CDS |
| ACTTTGGAAAAGCAAAAGAA+CGG | 0.645171 | 8_3:-61861463 | Msa1300340:CDS |
| GGCAAGCCTTCAGTTCAGGG+TGG | 0.742474 | 8_3:-61861391 | Msa1300340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATATATTTAAATGCATAT+TGG | + | chr8_3:61861524-61861543 | None:intergenic | 15.0% |
| !! | TGTATATTCATAATAACTTA+AGG | + | chr8_3:61861797-61861816 | None:intergenic | 15.0% |
| !! | AGATATATTTAAATGCATAT+TGG | + | chr8_3:61861524-61861543 | None:intergenic | 15.0% |
| !! | TGTATATTCATAATAACTTA+AGG | + | chr8_3:61861797-61861816 | None:intergenic | 15.0% |
| !!! | ACTTATTCATTACCTTATTT+AGG | + | chr8_3:61861432-61861451 | None:intergenic | 20.0% |
| !! | TAAAAAACAATTGTAAATCG+AGG | - | chr8_3:61861919-61861938 | Msa1300340:intron | 20.0% |
| !! | AAAAAACAATTGTAAATCGA+GGG | - | chr8_3:61861920-61861939 | Msa1300340:intron | 20.0% |
| !! | AGTATATATCTCTCTTAAAT+AGG | + | chr8_3:61862094-61862113 | None:intergenic | 20.0% |
| !! | GAAAAAAGCAAATAAAACTT+TGG | - | chr8_3:61862461-61862480 | Msa1300340:intron | 20.0% |
| !!! | ACTTATTCATTACCTTATTT+AGG | + | chr8_3:61861432-61861451 | None:intergenic | 20.0% |
| !! | TAAAAAACAATTGTAAATCG+AGG | - | chr8_3:61861919-61861938 | Msa1300340:intron | 20.0% |
| !! | AAAAAACAATTGTAAATCGA+GGG | - | chr8_3:61861920-61861939 | Msa1300340:intron | 20.0% |
| !! | AGTATATATCTCTCTTAAAT+AGG | + | chr8_3:61862094-61862113 | None:intergenic | 20.0% |
| !! | GAAAAAAGCAAATAAAACTT+TGG | - | chr8_3:61862461-61862480 | Msa1300340:intron | 20.0% |
| ! | AATAAGTCCTCTTAAACTAT+AGG | - | chr8_3:61861445-61861464 | Msa1300340:CDS | 25.0% |
| ! | TATAAGACCTATAGTTTAAG+AGG | + | chr8_3:61861455-61861474 | None:intergenic | 25.0% |
| ! | TGAATTTGAAAGGACAAAAA+GGG | + | chr8_3:61861623-61861642 | None:intergenic | 25.0% |
| ! | TTGAATTTGAAAGGACAAAA+AGG | + | chr8_3:61861624-61861643 | None:intergenic | 25.0% |
| ! | TAATTGGTATTTAGATTTCC+AGG | - | chr8_3:61861734-61861753 | Msa1300340:CDS | 25.0% |
| !! | ATGAAACCATCCAAAAATTT+TGG | - | chr8_3:61862168-61862187 | Msa1300340:intron | 25.0% |
| ! | AATAAGTCCTCTTAAACTAT+AGG | - | chr8_3:61861445-61861464 | Msa1300340:CDS | 25.0% |
| ! | TATAAGACCTATAGTTTAAG+AGG | + | chr8_3:61861455-61861474 | None:intergenic | 25.0% |
| ! | TGAATTTGAAAGGACAAAAA+GGG | + | chr8_3:61861623-61861642 | None:intergenic | 25.0% |
| ! | TTGAATTTGAAAGGACAAAA+AGG | + | chr8_3:61861624-61861643 | None:intergenic | 25.0% |
| ! | TAATTGGTATTTAGATTTCC+AGG | - | chr8_3:61861734-61861753 | Msa1300340:CDS | 25.0% |
| !! | ATGAAACCATCCAAAAATTT+TGG | - | chr8_3:61862168-61862187 | Msa1300340:intron | 25.0% |
| TAACTGCAAAGATCACTTAT+TGG | + | chr8_3:61861304-61861323 | None:intergenic | 30.0% | |
| TGAAAAACTGCAAAATCCAA+CGG | + | chr8_3:61861347-61861366 | None:intergenic | 30.0% | |
| GACGAGACAAAAGAATTAAA+GGG | - | chr8_3:61861398-61861417 | Msa1300340:CDS | 30.0% | |
| ACGAGACAAAAGAATTAAAG+GGG | - | chr8_3:61861399-61861418 | Msa1300340:CDS | 30.0% | |
| CTGTCTTTCTCATTAATAAC+AGG | - | chr8_3:61861542-61861561 | Msa1300340:CDS | 30.0% | |
| GAATTTGAAAGGACAAAAAG+GGG | + | chr8_3:61861622-61861641 | None:intergenic | 30.0% | |
| GGTAAGTCAGAGAATTTAAT+TGG | - | chr8_3:61861718-61861737 | Msa1300340:CDS | 30.0% | |
| GGTTAACAAAAGAAGATAGA+AGG | + | chr8_3:61862124-61862143 | None:intergenic | 30.0% | |
| TTTGGATGGTTTCATCTTAA+AGG | + | chr8_3:61862163-61862182 | None:intergenic | 30.0% | |
| !! | TCACTTCCAAAATTTTTGGA+TGG | + | chr8_3:61862177-61862196 | None:intergenic | 30.0% |
| ! | CTCTTCACTTCCAAAATTTT+TGG | + | chr8_3:61862181-61862200 | None:intergenic | 30.0% |
| !! | CAAAAATTTTGGAAGTGAAG+AGG | - | chr8_3:61862179-61862198 | Msa1300340:intron | 30.0% |
| ATCACTATCATCTTCTATGT+GGG | + | chr8_3:61862247-61862266 | None:intergenic | 30.0% | |
| ! | TGATGGAGATATTGATAACA+TGG | - | chr8_3:61862263-61862282 | Msa1300340:intron | 30.0% |
| ! | ATTGATAACATGGATGATGA+AGG | - | chr8_3:61862273-61862292 | Msa1300340:intron | 30.0% |
| TGATGAAAGTGATGATTCTA+TGG | - | chr8_3:61862323-61862342 | Msa1300340:intron | 30.0% | |
| ! | ACTTTGGAAAAGCAAAAGAA+CGG | - | chr8_3:61862477-61862496 | Msa1300340:intron | 30.0% |
| TAACTGCAAAGATCACTTAT+TGG | + | chr8_3:61861304-61861323 | None:intergenic | 30.0% | |
| TGAAAAACTGCAAAATCCAA+CGG | + | chr8_3:61861347-61861366 | None:intergenic | 30.0% | |
| GACGAGACAAAAGAATTAAA+GGG | - | chr8_3:61861398-61861417 | Msa1300340:CDS | 30.0% | |
| ACGAGACAAAAGAATTAAAG+GGG | - | chr8_3:61861399-61861418 | Msa1300340:CDS | 30.0% | |
| CTGTCTTTCTCATTAATAAC+AGG | - | chr8_3:61861542-61861561 | Msa1300340:CDS | 30.0% | |
| GAATTTGAAAGGACAAAAAG+GGG | + | chr8_3:61861622-61861641 | None:intergenic | 30.0% | |
| GGTAAGTCAGAGAATTTAAT+TGG | - | chr8_3:61861718-61861737 | Msa1300340:CDS | 30.0% | |
| GGTTAACAAAAGAAGATAGA+AGG | + | chr8_3:61862124-61862143 | None:intergenic | 30.0% | |
| TTTGGATGGTTTCATCTTAA+AGG | + | chr8_3:61862163-61862182 | None:intergenic | 30.0% | |
| !! | TCACTTCCAAAATTTTTGGA+TGG | + | chr8_3:61862177-61862196 | None:intergenic | 30.0% |
| ! | CTCTTCACTTCCAAAATTTT+TGG | + | chr8_3:61862181-61862200 | None:intergenic | 30.0% |
| !! | CAAAAATTTTGGAAGTGAAG+AGG | - | chr8_3:61862179-61862198 | Msa1300340:intron | 30.0% |
| ATCACTATCATCTTCTATGT+GGG | + | chr8_3:61862247-61862266 | None:intergenic | 30.0% | |
| ! | TGATGGAGATATTGATAACA+TGG | - | chr8_3:61862263-61862282 | Msa1300340:intron | 30.0% |
| ! | ATTGATAACATGGATGATGA+AGG | - | chr8_3:61862273-61862292 | Msa1300340:intron | 30.0% |
| TGATGAAAGTGATGATTCTA+TGG | - | chr8_3:61862323-61862342 | Msa1300340:intron | 30.0% | |
| ! | ACTTTGGAAAAGCAAAAGAA+CGG | - | chr8_3:61862477-61862496 | Msa1300340:intron | 30.0% |
| ! | CTTATTGGTTGTTGTTGGAT+TGG | + | chr8_3:61861289-61861308 | None:intergenic | 35.0% |
| ! | GATCACTTATTGGTTGTTGT+TGG | + | chr8_3:61861294-61861313 | None:intergenic | 35.0% |
| GAAAAACTGCAAAATCCAAC+GGG | + | chr8_3:61861346-61861365 | None:intergenic | 35.0% | |
| CGACGAGACAAAAGAATTAA+AGG | - | chr8_3:61861397-61861416 | Msa1300340:CDS | 35.0% | |
| CATATTGGTAGATTGCAACA+GGG | + | chr8_3:61861509-61861528 | None:intergenic | 35.0% | |
| !! | GAGTGTTGCTTGAATTTGAA+AGG | + | chr8_3:61861633-61861652 | None:intergenic | 35.0% |
| ! | ATTTAGATTTCCAGGTGTTG+TGG | - | chr8_3:61861742-61861761 | Msa1300340:CDS | 35.0% |
| TCATCTTAAAGGCAACAACA+AGG | + | chr8_3:61862152-61862171 | None:intergenic | 35.0% | |
| CATCACTATCATCTTCTATG+TGG | + | chr8_3:61862248-61862267 | None:intergenic | 35.0% | |
| ! | CACATAGAAGATGATAGTGA+TGG | - | chr8_3:61862246-61862265 | Msa1300340:intron | 35.0% |
| TCATCACTTTCATCATCTTC+TGG | + | chr8_3:61862318-61862337 | None:intergenic | 35.0% | |
| ! | TCTTTCCCATGTTGATGAAT+TGG | + | chr8_3:61862369-61862388 | None:intergenic | 35.0% |
| AAAGAGAAGAAGTTTGCAGA+TGG | - | chr8_3:61862516-61862535 | Msa1300340:intron | 35.0% | |
| ! | TTTGCAGATGGTAATGCTAA+AGG | - | chr8_3:61862528-61862547 | Msa1300340:five_prime_UTR | 35.0% |
| ! | CTTATTGGTTGTTGTTGGAT+TGG | + | chr8_3:61861289-61861308 | None:intergenic | 35.0% |
| ! | GATCACTTATTGGTTGTTGT+TGG | + | chr8_3:61861294-61861313 | None:intergenic | 35.0% |
| GAAAAACTGCAAAATCCAAC+GGG | + | chr8_3:61861346-61861365 | None:intergenic | 35.0% | |
| CGACGAGACAAAAGAATTAA+AGG | - | chr8_3:61861397-61861416 | Msa1300340:CDS | 35.0% | |
| CATATTGGTAGATTGCAACA+GGG | + | chr8_3:61861509-61861528 | None:intergenic | 35.0% | |
| !! | GAGTGTTGCTTGAATTTGAA+AGG | + | chr8_3:61861633-61861652 | None:intergenic | 35.0% |
| ! | ATTTAGATTTCCAGGTGTTG+TGG | - | chr8_3:61861742-61861761 | Msa1300340:CDS | 35.0% |
| TCATCTTAAAGGCAACAACA+AGG | + | chr8_3:61862152-61862171 | None:intergenic | 35.0% | |
| CATCACTATCATCTTCTATG+TGG | + | chr8_3:61862248-61862267 | None:intergenic | 35.0% | |
| ! | CACATAGAAGATGATAGTGA+TGG | - | chr8_3:61862246-61862265 | Msa1300340:intron | 35.0% |
| TCATCACTTTCATCATCTTC+TGG | + | chr8_3:61862318-61862337 | None:intergenic | 35.0% | |
| ! | TCTTTCCCATGTTGATGAAT+TGG | + | chr8_3:61862369-61862388 | None:intergenic | 35.0% |
| AAAGAGAAGAAGTTTGCAGA+TGG | - | chr8_3:61862516-61862535 | Msa1300340:intron | 35.0% | |
| ! | TTTGCAGATGGTAATGCTAA+AGG | - | chr8_3:61862528-61862547 | Msa1300340:five_prime_UTR | 35.0% |
| ! | AGGGGTTTGAGACCTAAATA+AGG | - | chr8_3:61861417-61861436 | Msa1300340:CDS | 40.0% |
| GCATATTGGTAGATTGCAAC+AGG | + | chr8_3:61861510-61861529 | None:intergenic | 40.0% | |
| ! | TCATTGACTGCTTCTATAGC+TGG | - | chr8_3:61861686-61861705 | Msa1300340:CDS | 40.0% |
| TGTTGTGGCATGATATGGTA+TGG | - | chr8_3:61861757-61861776 | Msa1300340:CDS | 40.0% | |
| AACATACCGAAGTTGACAAG+AGG | - | chr8_3:61861983-61862002 | Msa1300340:intron | 40.0% | |
| ACATACCGAAGTTGACAAGA+GGG | - | chr8_3:61861984-61862003 | Msa1300340:intron | 40.0% | |
| GGTTCACATAAGACTCGAAA+CGG | - | chr8_3:61862005-61862024 | Msa1300340:intron | 40.0% | |
| AAAGGCAACAACAAGGAGAA+TGG | + | chr8_3:61862145-61862164 | None:intergenic | 40.0% | |
| GAATGTGAAAGCAGTGAATC+TGG | - | chr8_3:61862201-61862220 | Msa1300340:intron | 40.0% | |
| TCTGGATGGACCATGTATAT+TGG | - | chr8_3:61862219-61862238 | Msa1300340:intron | 40.0% | |
| CTGGATGGACCATGTATATT+GGG | - | chr8_3:61862220-61862239 | Msa1300340:intron | 40.0% | |
| TATGTGGGACCCAATATACA+TGG | + | chr8_3:61862232-61862251 | None:intergenic | 40.0% | |
| ATGGTTTCTGATGCTTCTTC+TGG | - | chr8_3:61862342-61862361 | Msa1300340:intron | 40.0% | |
| TGGTTTCTGATGCTTCTTCT+GGG | - | chr8_3:61862343-61862362 | Msa1300340:intron | 40.0% | |
| CATCAACATGGGAAAGACTA+TGG | - | chr8_3:61862372-61862391 | Msa1300340:intron | 40.0% | |
| AGACTATGGTTTCAAGCAAG+TGG | - | chr8_3:61862386-61862405 | Msa1300340:intron | 40.0% | |
| GCAAAAGAACGGAAAGAAAG+TGG | - | chr8_3:61862488-61862507 | Msa1300340:intron | 40.0% | |
| CAAGGGGAGAAAAAGGAAAT+AGG | - | chr8_3:61862575-61862594 | Msa1300340:five_prime_UTR | 40.0% | |
| CAACCACTTATGCTAGATTC+CGG | - | chr8_3:61862664-61862683 | Msa1300340:five_prime_UTR | 40.0% | |
| ! | AGGGGTTTGAGACCTAAATA+AGG | - | chr8_3:61861417-61861436 | Msa1300340:CDS | 40.0% |
| GCATATTGGTAGATTGCAAC+AGG | + | chr8_3:61861510-61861529 | None:intergenic | 40.0% | |
| ! | TCATTGACTGCTTCTATAGC+TGG | - | chr8_3:61861686-61861705 | Msa1300340:CDS | 40.0% |
| TGTTGTGGCATGATATGGTA+TGG | - | chr8_3:61861757-61861776 | Msa1300340:CDS | 40.0% | |
| AACATACCGAAGTTGACAAG+AGG | - | chr8_3:61861983-61862002 | Msa1300340:intron | 40.0% | |
| ACATACCGAAGTTGACAAGA+GGG | - | chr8_3:61861984-61862003 | Msa1300340:intron | 40.0% | |
| GGTTCACATAAGACTCGAAA+CGG | - | chr8_3:61862005-61862024 | Msa1300340:intron | 40.0% | |
| AAAGGCAACAACAAGGAGAA+TGG | + | chr8_3:61862145-61862164 | None:intergenic | 40.0% | |
| GAATGTGAAAGCAGTGAATC+TGG | - | chr8_3:61862201-61862220 | Msa1300340:intron | 40.0% | |
| TCTGGATGGACCATGTATAT+TGG | - | chr8_3:61862219-61862238 | Msa1300340:intron | 40.0% | |
| CTGGATGGACCATGTATATT+GGG | - | chr8_3:61862220-61862239 | Msa1300340:intron | 40.0% | |
| TATGTGGGACCCAATATACA+TGG | + | chr8_3:61862232-61862251 | None:intergenic | 40.0% | |
| ATGGTTTCTGATGCTTCTTC+TGG | - | chr8_3:61862342-61862361 | Msa1300340:intron | 40.0% | |
| TGGTTTCTGATGCTTCTTCT+GGG | - | chr8_3:61862343-61862362 | Msa1300340:intron | 40.0% | |
| CATCAACATGGGAAAGACTA+TGG | - | chr8_3:61862372-61862391 | Msa1300340:intron | 40.0% | |
| AGACTATGGTTTCAAGCAAG+TGG | - | chr8_3:61862386-61862405 | Msa1300340:intron | 40.0% | |
| GCAAAAGAACGGAAAGAAAG+TGG | - | chr8_3:61862488-61862507 | Msa1300340:intron | 40.0% | |
| CAAGGGGAGAAAAAGGAAAT+AGG | - | chr8_3:61862575-61862594 | Msa1300340:five_prime_UTR | 40.0% | |
| !! | TGATCAAGAAAGTGTCGAGC+TGG | - | chr8_3:61861853-61861872 | Msa1300340:intron | 45.0% |
| GTGAACCCTCTTGTCAACTT+CGG | + | chr8_3:61861992-61862011 | None:intergenic | 45.0% | |
| GTGAAAGCAGTGAATCTGGA+TGG | - | chr8_3:61862205-61862224 | Msa1300340:intron | 45.0% | |
| TCTGGGCCAATTCATCAACA+TGG | - | chr8_3:61862360-61862379 | Msa1300340:intron | 45.0% | |
| CTGGGCCAATTCATCAACAT+GGG | - | chr8_3:61862361-61862380 | Msa1300340:intron | 45.0% | |
| CTATGGTTTCAAGCAAGTGG+TGG | - | chr8_3:61862389-61862408 | Msa1300340:intron | 45.0% | |
| TAAAGGCAAGCCTTCAGTTC+AGG | - | chr8_3:61862545-61862564 | Msa1300340:five_prime_UTR | 45.0% | |
| AAAGGCAAGCCTTCAGTTCA+GGG | - | chr8_3:61862546-61862565 | Msa1300340:five_prime_UTR | 45.0% | |
| CGGAATCTAGCATAAGTGGT+TGG | + | chr8_3:61862666-61862685 | None:intergenic | 45.0% | |
| !! | TGATCAAGAAAGTGTCGAGC+TGG | - | chr8_3:61861853-61861872 | Msa1300340:intron | 45.0% |
| GTGAACCCTCTTGTCAACTT+CGG | + | chr8_3:61861992-61862011 | None:intergenic | 45.0% | |
| GTGAAAGCAGTGAATCTGGA+TGG | - | chr8_3:61862205-61862224 | Msa1300340:intron | 45.0% | |
| TCTGGGCCAATTCATCAACA+TGG | - | chr8_3:61862360-61862379 | Msa1300340:intron | 45.0% | |
| CTGGGCCAATTCATCAACAT+GGG | - | chr8_3:61862361-61862380 | Msa1300340:intron | 45.0% | |
| CTATGGTTTCAAGCAAGTGG+TGG | - | chr8_3:61862389-61862408 | Msa1300340:intron | 45.0% | |
| TAAAGGCAAGCCTTCAGTTC+AGG | - | chr8_3:61862545-61862564 | Msa1300340:five_prime_UTR | 45.0% | |
| AAAGGCAAGCCTTCAGTTCA+GGG | - | chr8_3:61862546-61862565 | Msa1300340:five_prime_UTR | 45.0% | |
| CGGAATCTAGCATAAGTGGT+TGG | + | chr8_3:61862666-61862685 | None:intergenic | 45.0% | |
| !! | AAATATTTATAAAATATTCT+CGG | + | chr8_3:61861954-61861973 | None:intergenic | 5.0% |
| !! | AAATATTTATAAAATATTCT+CGG | + | chr8_3:61861954-61861973 | None:intergenic | 5.0% |
| TAGTAACTCCACTCTCCCGT+TGG | - | chr8_3:61861328-61861347 | Msa1300340:three_prime_UTR | 50.0% | |
| TGCAAAATCCAACGGGAGAG+TGG | + | chr8_3:61861339-61861358 | None:intergenic | 50.0% | |
| TTCTATAGCTGGCTGCTGCT+TGG | - | chr8_3:61861697-61861716 | Msa1300340:CDS | 50.0% | |
| CCATATCATGCCACAACACC+TGG | + | chr8_3:61861755-61861774 | None:intergenic | 50.0% | |
| ! | CCAGGTGTTGTGGCATGATA+TGG | - | chr8_3:61861752-61861771 | Msa1300340:CDS | 50.0% |
| !!! | ACGCTGCTACTGCTTTTTCG+AGG | + | chr8_3:61862037-61862056 | None:intergenic | 50.0% |
| CGAAAAAGCAGTAGCAGCGT+CGG | - | chr8_3:61862037-61862056 | Msa1300340:intron | 50.0% | |
| TAGTAACTCCACTCTCCCGT+TGG | - | chr8_3:61861328-61861347 | Msa1300340:three_prime_UTR | 50.0% | |
| TGCAAAATCCAACGGGAGAG+TGG | + | chr8_3:61861339-61861358 | None:intergenic | 50.0% | |
| TTCTATAGCTGGCTGCTGCT+TGG | - | chr8_3:61861697-61861716 | Msa1300340:CDS | 50.0% | |
| CCATATCATGCCACAACACC+TGG | + | chr8_3:61861755-61861774 | None:intergenic | 50.0% | |
| ! | CCAGGTGTTGTGGCATGATA+TGG | - | chr8_3:61861752-61861771 | Msa1300340:CDS | 50.0% |
| !!! | ACGCTGCTACTGCTTTTTCG+AGG | + | chr8_3:61862037-61862056 | None:intergenic | 50.0% |
| CGAAAAAGCAGTAGCAGCGT+CGG | - | chr8_3:61862037-61862056 | Msa1300340:intron | 50.0% | |
| !! | AAAGCAGTAGCAGCGTCGGT+CGG | - | chr8_3:61862041-61862060 | Msa1300340:intron | 55.0% |
| AAGCCTTCAGTTCAGGGTGG+TGG | - | chr8_3:61862552-61862571 | Msa1300340:five_prime_UTR | 55.0% | |
| TTGCCACCACCCTGAACTGA+AGG | + | chr8_3:61862558-61862577 | None:intergenic | 55.0% | |
| ! | TTCAGTTCAGGGTGGTGGCA+AGG | - | chr8_3:61862557-61862576 | Msa1300340:five_prime_UTR | 55.0% |
| ! | TCAGTTCAGGGTGGTGGCAA+GGG | - | chr8_3:61862558-61862577 | Msa1300340:five_prime_UTR | 55.0% |
| GTGGTGGCAAGGGGAGAAAA+AGG | - | chr8_3:61862568-61862587 | Msa1300340:five_prime_UTR | 55.0% | |
| !! | AAAGCAGTAGCAGCGTCGGT+CGG | - | chr8_3:61862041-61862060 | Msa1300340:intron | 55.0% |
| AAGCCTTCAGTTCAGGGTGG+TGG | - | chr8_3:61862552-61862571 | Msa1300340:five_prime_UTR | 55.0% | |
| TTGCCACCACCCTGAACTGA+AGG | + | chr8_3:61862558-61862577 | None:intergenic | 55.0% | |
| ! | TTCAGTTCAGGGTGGTGGCA+AGG | - | chr8_3:61862557-61862576 | Msa1300340:five_prime_UTR | 55.0% |
| ! | TCAGTTCAGGGTGGTGGCAA+GGG | - | chr8_3:61862558-61862577 | Msa1300340:five_prime_UTR | 55.0% |
| GTGGTGGCAAGGGGAGAAAA+AGG | - | chr8_3:61862568-61862587 | Msa1300340:five_prime_UTR | 55.0% | |
| GGCAAGCCTTCAGTTCAGGG+TGG | - | chr8_3:61862549-61862568 | Msa1300340:five_prime_UTR | 60.0% | |
| ! | CAGTTCAGGGTGGTGGCAAG+GGG | - | chr8_3:61862559-61862578 | Msa1300340:five_prime_UTR | 60.0% |
| GGCAAGCCTTCAGTTCAGGG+TGG | - | chr8_3:61862549-61862568 | Msa1300340:five_prime_UTR | 60.0% | |
| ! | CAGTTCAGGGTGGTGGCAAG+GGG | - | chr8_3:61862559-61862578 | Msa1300340:five_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 61861276 | 61862686 | 61861276 | ID=Msa1300340;Name=Msa1300340 |
| chr8_3 | mRNA | 61861276 | 61862686 | 61861276 | ID=Msa1300340-mRNA-1;Parent=Msa1300340;Name=Msa1300340-mRNA-1;_AED=0.00;_eAED=0.00;_QI=163|1|1|1|0|0.5|2|90|142 |
| chr8_3 | exon | 61861276 | 61861794 | 61861276 | ID=Msa1300340-mRNA-1:exon:18292;Parent=Msa1300340-mRNA-1 |
| chr8_3 | exon | 61862524 | 61862686 | 61862524 | ID=Msa1300340-mRNA-1:exon:18291;Parent=Msa1300340-mRNA-1 |
| chr8_3 | five_prime_UTR | 61862524 | 61862686 | 61862524 | ID=Msa1300340-mRNA-1:five_prime_utr;Parent=Msa1300340-mRNA-1 |
| chr8_3 | CDS | 61861366 | 61861794 | 61861366 | ID=Msa1300340-mRNA-1:cds;Parent=Msa1300340-mRNA-1 |
| chr8_3 | three_prime_UTR | 61861276 | 61861365 | 61861276 | ID=Msa1300340-mRNA-1:three_prime_utr;Parent=Msa1300340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
