Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300500 | XP_013458057.1 | 98.680 | 303 | 4 | 0 | 1 | 303 | 1 | 303 | 0.0 | 621 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300500 | sp|Q9FNN6|SRM1_ARATH | 51.027 | 292 | 95 | 9 | 3 | 283 | 7 | 261 | 5.11e-80 | 247 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300500 | A0A072USM0 | 98.680 | 303 | 4 | 0 | 1 | 303 | 1 | 303 | 0.0 | 621 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1300500 | TF | MYB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017120 | Msa1300500 | 0.813864 | 2.062893e-51 | -8.615850e-47 |
| Msa0030740 | Msa1300500 | 0.839251 | 1.772381e-57 | -8.615850e-47 |
| Msa0033600 | Msa1300500 | 0.812886 | 3.383384e-51 | -8.615850e-47 |
| Msa0033650 | Msa1300500 | 0.801195 | 1.009860e-48 | -8.615850e-47 |
| Msa0035090 | Msa1300500 | 0.859820 | 3.175108e-63 | -8.615850e-47 |
| Msa0065390 | Msa1300500 | 0.813460 | 2.531720e-51 | -8.615850e-47 |
| Msa0075850 | Msa1300500 | 0.801584 | 8.403554e-49 | -8.615850e-47 |
| Msa0083570 | Msa1300500 | 0.843398 | 1.436368e-58 | -8.615850e-47 |
| Msa0089410 | Msa1300500 | 0.827958 | 1.173338e-54 | -8.615850e-47 |
| Msa0092750 | Msa1300500 | 0.816108 | 6.553351e-52 | -8.615850e-47 |
| Msa0094420 | Msa1300500 | 0.822006 | 2.984453e-53 | -8.615850e-47 |
| Msa0103780 | Msa1300500 | 0.801780 | 7.660655e-49 | -8.615850e-47 |
| Msa0110710 | Msa1300500 | 0.812501 | 4.107289e-51 | -8.615850e-47 |
| Msa0606060 | Msa1300500 | 0.808976 | 2.376428e-50 | -8.615850e-47 |
| Msa0606250 | Msa1300500 | 0.846374 | 2.261224e-59 | -8.615850e-47 |
| Msa0615850 | Msa1300500 | 0.801524 | 8.644580e-49 | -8.615850e-47 |
| Msa0619060 | Msa1300500 | 0.823522 | 1.323813e-53 | -8.615850e-47 |
| Msa0619170 | Msa1300500 | 0.806006 | 1.014191e-49 | -8.615850e-47 |
| Msa0619480 | Msa1300500 | 0.817342 | 3.465619e-52 | -8.615850e-47 |
| Msa0622390 | Msa1300500 | 0.836932 | 7.003530e-57 | -8.615850e-47 |
| Msa0622400 | Msa1300500 | 0.813527 | 2.447016e-51 | -8.615850e-47 |
| Msa0623270 | Msa1300500 | 0.800770 | 1.233379e-48 | -8.615850e-47 |
| Msa0624220 | Msa1300500 | 0.808177 | 3.520655e-50 | -8.615850e-47 |
| Msa0624240 | Msa1300500 | 0.821229 | 4.512758e-53 | -8.615850e-47 |
| Msa0624890 | Msa1300500 | 0.826687 | 2.365588e-54 | -8.615850e-47 |
| Msa0626890 | Msa1300500 | 0.835586 | 1.539419e-56 | -8.615850e-47 |
| Msa0647110 | Msa1300500 | 0.811410 | 7.100304e-51 | -8.615850e-47 |
| Msa0659130 | Msa1300500 | 0.821716 | 3.482346e-53 | -8.615850e-47 |
| Msa0659640 | Msa1300500 | 0.815796 | 7.692417e-52 | -8.615850e-47 |
| Msa0663650 | Msa1300500 | 0.801456 | 8.926601e-49 | -8.615850e-47 |
| Msa0665010 | Msa1300500 | 0.818718 | 1.693484e-52 | -8.615850e-47 |
| Msa0667710 | Msa1300500 | 0.834385 | 3.089767e-56 | -8.615850e-47 |
| Msa0686610 | Msa1300500 | 0.807662 | 4.530646e-50 | -8.615850e-47 |
| Msa0698900 | Msa1300500 | 0.806841 | 6.762832e-50 | -8.615850e-47 |
| Msa0702070 | Msa1300500 | 0.803836 | 2.881841e-49 | -8.615850e-47 |
| Msa0702120 | Msa1300500 | 0.810698 | 1.012902e-50 | -8.615850e-47 |
| Msa0704570 | Msa1300500 | 0.838026 | 3.671033e-57 | -8.615850e-47 |
| Msa0705610 | Msa1300500 | 0.830940 | 2.213168e-55 | -8.615850e-47 |
| Msa0714020 | Msa1300500 | 0.828970 | 6.687038e-55 | -8.615850e-47 |
| Msa0714160 | Msa1300500 | 0.828948 | 6.766432e-55 | -8.615850e-47 |
| Msa0716670 | Msa1300500 | 0.803607 | 3.216016e-49 | -8.615850e-47 |
| Msa0719340 | Msa1300500 | 0.801410 | 9.125103e-49 | -8.615850e-47 |
| Msa0724300 | Msa1300500 | 0.811416 | 7.078729e-51 | -8.615850e-47 |
| Msa0734430 | Msa1300500 | 0.828126 | 1.069154e-54 | -8.615850e-47 |
| Msa0740420 | Msa1300500 | 0.818775 | 1.643831e-52 | -8.615850e-47 |
| Msa0757110 | Msa1300500 | 0.820067 | 8.343964e-53 | -8.615850e-47 |
| Msa0771940 | Msa1300500 | 0.807990 | 3.859378e-50 | -8.615850e-47 |
| Msa0772150 | Msa1300500 | 0.810152 | 1.328773e-50 | -8.615850e-47 |
| Msa0804930 | Msa1300500 | 0.813909 | 2.016440e-51 | -8.615850e-47 |
| Msa0814760 | Msa1300500 | 0.814986 | 1.165122e-51 | -8.615850e-47 |
| Msa0821490 | Msa1300500 | 0.804184 | 2.439813e-49 | -8.615850e-47 |
| Msa0830410 | Msa1300500 | 0.809252 | 2.074686e-50 | -8.615850e-47 |
| Msa0836190 | Msa1300500 | 0.820835 | 5.559401e-53 | -8.615850e-47 |
| Msa0841980 | Msa1300500 | 0.819377 | 1.199248e-52 | -8.615850e-47 |
| Msa0122180 | Msa1300500 | 0.804281 | 2.329322e-49 | -8.615850e-47 |
| Msa0123900 | Msa1300500 | 0.801429 | 9.043142e-49 | -8.615850e-47 |
| Msa0123940 | Msa1300500 | 0.801743 | 7.795312e-49 | -8.615850e-47 |
| Msa0130120 | Msa1300500 | 0.857650 | 1.412943e-62 | -8.615850e-47 |
| Msa0133450 | Msa1300500 | 0.804358 | 2.244691e-49 | -8.615850e-47 |
| Msa0135400 | Msa1300500 | 0.806235 | 9.077102e-50 | -8.615850e-47 |
| Msa0136520 | Msa1300500 | 0.801011 | 1.100924e-48 | -8.615850e-47 |
| Msa0141670 | Msa1300500 | 0.804161 | 2.466549e-49 | -8.615850e-47 |
| Msa0143360 | Msa1300500 | 0.818599 | 1.802173e-52 | -8.615850e-47 |
| Msa0143490 | Msa1300500 | 0.817039 | 4.053740e-52 | -8.615850e-47 |
| Msa0149070 | Msa1300500 | 0.817716 | 2.854084e-52 | -8.615850e-47 |
| Msa0157020 | Msa1300500 | 0.827554 | 1.467567e-54 | -8.615850e-47 |
| Msa0168390 | Msa1300500 | 0.810815 | 9.556295e-51 | -8.615850e-47 |
| Msa0175900 | Msa1300500 | 0.863059 | 3.260369e-64 | -8.615850e-47 |
| Msa0180980 | Msa1300500 | 0.818993 | 1.466417e-52 | -8.615850e-47 |
| Msa0190000 | Msa1300500 | 0.804198 | 2.424036e-49 | -8.615850e-47 |
| Msa0202630 | Msa1300500 | 0.800842 | 1.192022e-48 | -8.615850e-47 |
| Msa0207180 | Msa1300500 | 0.808482 | 3.031572e-50 | -8.615850e-47 |
| Msa0227960 | Msa1300500 | 0.803637 | 3.169966e-49 | -8.615850e-47 |
| Msa0230400 | Msa1300500 | 0.811131 | 8.162654e-51 | -8.615850e-47 |
| Msa0236350 | Msa1300500 | 0.801107 | 1.052364e-48 | -8.615850e-47 |
| Msa1232860 | Msa1300500 | 0.804772 | 1.839847e-49 | -8.615850e-47 |
| Msa1248400 | Msa1300500 | 0.835468 | 1.649322e-56 | -8.615850e-47 |
| Msa1254210 | Msa1300500 | 0.815771 | 7.794065e-52 | -8.615850e-47 |
| Msa1261000 | Msa1300500 | 0.942793 | 3.823340e-102 | -8.615850e-47 |
| Msa1264230 | Msa1300500 | 0.807804 | 4.226239e-50 | -8.615850e-47 |
| Msa1289340 | Msa1300500 | 0.813112 | 3.018045e-51 | -8.615850e-47 |
| Msa1300500 | Msa1300880 | 0.801242 | 9.875517e-49 | -8.615850e-47 |
| Msa1300500 | Msa1302150 | 0.817096 | 3.936446e-52 | -8.615850e-47 |
| Msa1300500 | Msa1302920 | 0.840871 | 6.697992e-58 | -8.615850e-47 |
| Msa1300500 | Msa1309100 | 0.820348 | 7.192876e-53 | -8.615850e-47 |
| Msa1300500 | Msa1325980 | 0.808914 | 2.450675e-50 | -8.615850e-47 |
| Msa1300500 | Msa1327820 | 0.840218 | 9.927948e-58 | -8.615850e-47 |
| Msa1300500 | Msa1331900 | 0.824125 | 9.563325e-54 | -8.615850e-47 |
| Msa1300500 | Msa1334650 | 0.822850 | 1.899289e-53 | -8.615850e-47 |
| Msa1300500 | Msa1339250 | 0.810962 | 8.881693e-51 | -8.615850e-47 |
| Msa1300500 | Msa1345470 | 0.826373 | 2.811552e-54 | -8.615850e-47 |
| Msa1300500 | Msa1348770 | 0.802207 | 6.260867e-49 | -8.615850e-47 |
| Msa1300500 | Msa1351560 | 0.834210 | 3.418212e-56 | -8.615850e-47 |
| Msa1300500 | Msa1352820 | 0.840914 | 6.524373e-58 | -8.615850e-47 |
| Msa1300500 | Msa1365210 | 0.829747 | 4.329731e-55 | -8.615850e-47 |
| Msa1300500 | Msa1373500 | 0.802082 | 6.641373e-49 | -8.615850e-47 |
| Msa1300500 | Msa1379070 | 0.845882 | 3.077621e-59 | -8.615850e-47 |
| Msa1300500 | Msa1379090 | 0.841729 | 3.981602e-58 | -8.615850e-47 |
| Msa1300500 | Msa1385940 | 0.809798 | 1.583715e-50 | -8.615850e-47 |
| Msa1300500 | Msa1388230 | 0.830205 | 3.348158e-55 | -8.615850e-47 |
| Msa1300500 | Msa1389500 | 0.820868 | 5.463784e-53 | -8.615850e-47 |
| Msa1300500 | Msa1391400 | 0.830228 | 3.305904e-55 | -8.615850e-47 |
| Msa1300500 | Msa1392680 | 0.805943 | 1.045605e-49 | -8.615850e-47 |
| Msa1300500 | Msa1397110 | 0.800717 | 1.264428e-48 | -8.615850e-47 |
| Msa1300500 | Msa1397540 | 0.843367 | 1.463600e-58 | -8.615850e-47 |
| Msa1300500 | Msa1403900 | 0.803570 | 3.273610e-49 | -8.615850e-47 |
| Msa1300500 | Msa1413600 | 0.848824 | 4.789809e-60 | -8.615850e-47 |
| Msa1300500 | Msa1419040 | 0.811371 | 7.238552e-51 | -8.615850e-47 |
| Msa1300500 | Msa1420630 | 0.838106 | 3.501080e-57 | -8.615850e-47 |
| Msa1300500 | Msa1425110 | 0.815211 | 1.038114e-51 | -8.615850e-47 |
| Msa1300500 | Msa1425570 | 0.839494 | 1.532294e-57 | -8.615850e-47 |
| Msa1300500 | Msa1437690 | 0.808373 | 3.197929e-50 | -8.615850e-47 |
| Msa1300500 | Msa1439800 | 0.836926 | 7.025105e-57 | -8.615850e-47 |
| Msa1300500 | Msa1441590 | 0.825385 | 4.824653e-54 | -8.615850e-47 |
| Msa1300500 | Msa1444750 | 0.813888 | 2.037934e-51 | -8.615850e-47 |
| Msa1300500 | Msa1456650 | 0.800465 | 1.422786e-48 | -8.615850e-47 |
| Msa0371610 | Msa1300500 | 0.817314 | 3.516778e-52 | -8.615850e-47 |
| Msa0372550 | Msa1300500 | 0.801004 | 1.104804e-48 | -8.615850e-47 |
| Msa0375430 | Msa1300500 | 0.807002 | 6.252422e-50 | -8.615850e-47 |
| Msa0376900 | Msa1300500 | 0.815928 | 7.189309e-52 | -8.615850e-47 |
| Msa0377460 | Msa1300500 | 0.819027 | 1.440951e-52 | -8.615850e-47 |
| Msa0379900 | Msa1300500 | 0.809465 | 1.867351e-50 | -8.615850e-47 |
| Msa0392410 | Msa1300500 | 0.831208 | 1.901142e-55 | -8.615850e-47 |
| Msa0392450 | Msa1300500 | 0.840095 | 1.068919e-57 | -8.615850e-47 |
| Msa0392480 | Msa1300500 | 0.849265 | 3.613597e-60 | -8.615850e-47 |
| Msa0393540 | Msa1300500 | 0.809031 | 2.313080e-50 | -8.615850e-47 |
| Msa0401370 | Msa1300500 | 0.823482 | 1.352801e-53 | -8.615850e-47 |
| Msa0420070 | Msa1300500 | 0.824220 | 9.083676e-54 | -8.615850e-47 |
| Msa0423110 | Msa1300500 | 0.817211 | 3.709997e-52 | -8.615850e-47 |
| Msa0427050 | Msa1300500 | 0.820064 | 8.357576e-53 | -8.615850e-47 |
| Msa0434630 | Msa1300500 | 0.835462 | 1.654789e-56 | -8.615850e-47 |
| Msa0440450 | Msa1300500 | 0.850502 | 1.629301e-60 | -8.615850e-47 |
| Msa0462120 | Msa1300500 | 0.811831 | 5.751816e-51 | -8.615850e-47 |
| Msa0466100 | Msa1300500 | 0.828051 | 1.114576e-54 | -8.615850e-47 |
| Msa0473320 | Msa1300500 | 0.808559 | 2.917875e-50 | -8.615850e-47 |
| Msa0473450 | Msa1300500 | 0.801863 | 7.367832e-49 | -8.615850e-47 |
| Msa0474640 | Msa1300500 | 0.802641 | 5.094614e-49 | -8.615850e-47 |
| Msa0982810 | Msa1300500 | 0.803600 | 3.226677e-49 | -8.615850e-47 |
| Msa0983030 | Msa1300500 | 0.816576 | 5.151463e-52 | -8.615850e-47 |
| Msa1022310 | Msa1300500 | 0.802704 | 4.943375e-49 | -8.615850e-47 |
| Msa1028210 | Msa1300500 | 0.803452 | 3.462507e-49 | -8.615850e-47 |
| Msa1040770 | Msa1300500 | 0.819351 | 1.215361e-52 | -8.615850e-47 |
| Msa1042380 | Msa1300500 | 0.820249 | 7.577412e-53 | -8.615850e-47 |
| Msa1044040 | Msa1300500 | 0.811867 | 5.648425e-51 | -8.615850e-47 |
| Msa1061180 | Msa1300500 | 0.801238 | 9.893698e-49 | -8.615850e-47 |
| Msa1070900 | Msa1300500 | 0.817650 | 2.953426e-52 | -8.615850e-47 |
| Msa1070930 | Msa1300500 | 0.803006 | 4.283574e-49 | -8.615850e-47 |
| Msa1090230 | Msa1300500 | 0.817621 | 2.998850e-52 | -8.615850e-47 |
| Msa0244320 | Msa1300500 | 0.802567 | 5.276055e-49 | -8.615850e-47 |
| Msa0244750 | Msa1300500 | 0.818363 | 2.038208e-52 | -8.615850e-47 |
| Msa0253410 | Msa1300500 | 0.844931 | 5.566953e-59 | -8.615850e-47 |
| Msa0263520 | Msa1300500 | 0.807301 | 5.405053e-50 | -8.615850e-47 |
| Msa0268160 | Msa1300500 | 0.805997 | 1.018533e-49 | -8.615850e-47 |
| Msa0270610 | Msa1300500 | 0.802074 | 6.665692e-49 | -8.615850e-47 |
| Msa0274780 | Msa1300500 | 0.820050 | 8.416473e-53 | -8.615850e-47 |
| Msa0274870 | Msa1300500 | 0.804959 | 1.682000e-49 | -8.615850e-47 |
| Msa0299020 | Msa1300500 | 0.805226 | 1.478375e-49 | -8.615850e-47 |
| Msa0301800 | Msa1300500 | 0.804525 | 2.071539e-49 | -8.615850e-47 |
| Msa0304870 | Msa1300500 | 0.805732 | 1.158362e-49 | -8.615850e-47 |
| Msa0315480 | Msa1300500 | 0.819832 | 9.441537e-53 | -8.615850e-47 |
| Msa0338670 | Msa1300500 | 0.803518 | 3.355352e-49 | -8.615850e-47 |
| Msa0341260 | Msa1300500 | 0.805640 | 1.211026e-49 | -8.615850e-47 |
| Msa0349000 | Msa1300500 | 0.814721 | 1.333664e-51 | -8.615850e-47 |
| Msa1125100 | Msa1300500 | 0.832652 | 8.366450e-56 | -8.615850e-47 |
| Msa1125150 | Msa1300500 | 0.835366 | 1.749983e-56 | -8.615850e-47 |
| Msa1147200 | Msa1300500 | 0.806961 | 6.379937e-50 | -8.615850e-47 |
| Msa1149760 | Msa1300500 | 0.815191 | 1.049204e-51 | -8.615850e-47 |
| Msa1173410 | Msa1300500 | 0.804521 | 2.075302e-49 | -8.615850e-47 |
| Msa1181380 | Msa1300500 | 0.817857 | 2.652961e-52 | -8.615850e-47 |
| Msa1195860 | Msa1300500 | 0.842592 | 2.353162e-58 | -8.615850e-47 |
| Msa1200920 | Msa1300500 | 0.815310 | 9.872246e-52 | -8.615850e-47 |
| Msa1214400 | Msa1300500 | 0.987907 | 5.559592e-172 | -8.615850e-47 |
| Msa1215770 | Msa1300500 | 0.801453 | 8.940908e-49 | -8.615850e-47 |
| Msa1218720 | Msa1300500 | 0.847097 | 1.434336e-59 | -8.615850e-47 |
| Msa1220740 | Msa1300500 | 0.824982 | 6.007970e-54 | -8.615850e-47 |
| Msa0487560 | Msa1300500 | 0.845200 | 4.709387e-59 | -8.615850e-47 |
| Msa0487620 | Msa1300500 | 0.855699 | 5.295864e-62 | -8.615850e-47 |
| Msa0488830 | Msa1300500 | 0.812157 | 4.882662e-51 | -8.615850e-47 |
| Msa0511890 | Msa1300500 | 0.821821 | 3.292409e-53 | -8.615850e-47 |
| Msa0517400 | Msa1300500 | 0.817846 | 2.668646e-52 | -8.615850e-47 |
| Msa0532910 | Msa1300500 | 0.837463 | 5.121189e-57 | -8.615850e-47 |
| Msa0534890 | Msa1300500 | 0.800256 | 1.569431e-48 | -8.615850e-47 |
| Msa0539900 | Msa1300500 | 0.807072 | 6.043392e-50 | -8.615850e-47 |
| Msa0545910 | Msa1300500 | 0.833697 | 4.594496e-56 | -8.615850e-47 |
| Msa0550720 | Msa1300500 | 0.806539 | 7.832117e-50 | -8.615850e-47 |
| Msa0550840 | Msa1300500 | 0.839371 | 1.649259e-57 | -8.615850e-47 |
| Msa0550870 | Msa1300500 | 0.811092 | 8.319985e-51 | -8.615850e-47 |
| Msa0587060 | Msa1300500 | 0.836503 | 9.006875e-57 | -8.615850e-47 |
| Msa0594180 | Msa1300500 | 0.813922 | 2.003079e-51 | -8.615850e-47 |
| Msa0595780 | Msa1300500 | 0.811108 | 8.254862e-51 | -8.615850e-47 |
| Msa0601710 | Msa1300500 | 0.808881 | 2.491198e-50 | -8.615850e-47 |
| Msa0855490 | Msa1300500 | 0.815464 | 9.122997e-52 | -8.615850e-47 |
| Msa0910650 | Msa1300500 | 0.804345 | 2.258291e-49 | -8.615850e-47 |
| Msa0955310 | Msa1300500 | 0.846794 | 1.736082e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300500 | MtrunA17_Chr4g0062741 | 98.680 | 303 | 4 | 0 | 1 | 303 | 1 | 303 | 0.0 | 621 |
| Msa1300500 | MtrunA17_Chr1g0162081 | 52.131 | 305 | 103 | 9 | 8 | 296 | 12 | 289 | 1.20e-89 | 269 |
| Msa1300500 | MtrunA17_Chr3g0104071 | 48.804 | 209 | 71 | 5 | 8 | 211 | 43 | 220 | 4.21e-56 | 184 |
| Msa1300500 | MtrunA17_Chr5g0429521 | 48.039 | 204 | 69 | 4 | 8 | 206 | 29 | 200 | 1.48e-55 | 182 |
| Msa1300500 | MtrunA17_Chr7g0241761 | 37.171 | 304 | 141 | 9 | 3 | 288 | 30 | 301 | 2.52e-54 | 179 |
| Msa1300500 | MtrunA17_Chr1g0210471 | 45.500 | 200 | 79 | 3 | 8 | 207 | 24 | 193 | 2.87e-53 | 174 |
| Msa1300500 | MtrunA17_Chr5g0436501 | 40.952 | 210 | 84 | 5 | 8 | 212 | 27 | 201 | 5.07e-47 | 159 |
| Msa1300500 | MtrunA17_Chr8g0365011 | 34.557 | 327 | 134 | 12 | 1 | 296 | 1 | 278 | 2.99e-45 | 155 |
| Msa1300500 | MtrunA17_Chr4g0055931 | 67.059 | 85 | 28 | 0 | 127 | 211 | 84 | 168 | 6.43e-35 | 129 |
| Msa1300500 | MtrunA17_Chr6g0488471 | 72.222 | 72 | 20 | 0 | 132 | 203 | 91 | 162 | 7.18e-34 | 125 |
| Msa1300500 | MtrunA17_Chr8g0389241 | 73.239 | 71 | 18 | 1 | 132 | 202 | 99 | 168 | 2.83e-33 | 123 |
| Msa1300500 | MtrunA17_Chr2g0331031 | 60.638 | 94 | 30 | 1 | 109 | 202 | 87 | 173 | 1.70e-32 | 123 |
| Msa1300500 | MtrunA17_Chr8g0364731 | 50.000 | 146 | 50 | 7 | 147 | 278 | 10 | 146 | 1.00e-29 | 111 |
| Msa1300500 | MtrunA17_Chr5g0415191 | 59.184 | 98 | 30 | 1 | 107 | 204 | 81 | 168 | 1.30e-27 | 109 |
| Msa1300500 | MtrunA17_Chr3g0092621 | 51.456 | 103 | 39 | 1 | 113 | 204 | 48 | 150 | 1.29e-26 | 102 |
| Msa1300500 | MtrunA17_Chr4g0059701 | 68.354 | 79 | 25 | 0 | 126 | 204 | 72 | 150 | 1.33e-25 | 103 |
| Msa1300500 | MtrunA17_Chr8g0364741 | 38.776 | 147 | 50 | 5 | 4 | 147 | 6 | 115 | 1.16e-24 | 96.3 |
| Msa1300500 | MtrunA17_Chr5g0409841 | 50.617 | 81 | 38 | 1 | 134 | 212 | 88 | 168 | 6.37e-23 | 94.7 |
| Msa1300500 | MtrunA17_Chr5g0440731 | 54.430 | 79 | 32 | 2 | 134 | 209 | 101 | 178 | 8.54e-23 | 95.9 |
| Msa1300500 | MtrunA17_Chr3g0135671 | 56.410 | 78 | 31 | 2 | 128 | 202 | 81 | 158 | 1.20e-22 | 94.0 |
| Msa1300500 | MtrunA17_Chr5g0440741 | 56.410 | 78 | 29 | 3 | 135 | 209 | 98 | 173 | 5.07e-22 | 93.6 |
| Msa1300500 | MtrunA17_Chr6g0452791 | 57.746 | 71 | 20 | 1 | 138 | 208 | 80 | 140 | 6.64e-20 | 85.1 |
| Msa1300500 | MtrunA17_Chr5g0409831 | 46.067 | 89 | 45 | 1 | 127 | 212 | 66 | 154 | 3.24e-18 | 82.0 |
| Msa1300500 | MtrunA17_Chr5g0432921 | 32.338 | 201 | 93 | 10 | 8 | 205 | 21 | 181 | 3.92e-18 | 81.6 |
| Msa1300500 | MtrunA17_Chr5g0432941 | 32.836 | 201 | 91 | 10 | 8 | 205 | 22 | 181 | 4.92e-17 | 78.6 |
| Msa1300500 | MtrunA17_Chr1g0155181 | 46.667 | 75 | 36 | 2 | 1 | 75 | 1 | 71 | 1.52e-16 | 73.6 |
| Msa1300500 | MtrunA17_Chr3g0141601 | 46.667 | 75 | 37 | 2 | 3 | 77 | 2 | 73 | 3.37e-16 | 72.8 |
| Msa1300500 | MtrunA17_Chr6g0449111 | 45.946 | 74 | 37 | 1 | 2 | 75 | 4 | 74 | 2.54e-14 | 67.0 |
| Msa1300500 | MtrunA17_Chr1g0192061 | 48.611 | 72 | 33 | 2 | 140 | 208 | 63 | 133 | 4.42e-14 | 69.3 |
| Msa1300500 | MtrunA17_Chr3g0144631 | 40.000 | 70 | 39 | 1 | 4 | 73 | 12 | 78 | 8.00e-13 | 63.2 |
| Msa1300500 | MtrunA17_Chr8g0370121 | 47.170 | 53 | 28 | 0 | 135 | 187 | 97 | 149 | 7.08e-12 | 64.3 |
| Msa1300500 | MtrunA17_Chr3g0113121 | 45.946 | 74 | 33 | 2 | 140 | 206 | 97 | 170 | 7.93e-11 | 60.8 |
| Msa1300500 | MtrunA17_Chr3g0081631 | 43.421 | 76 | 38 | 3 | 1 | 75 | 4 | 75 | 8.45e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300500 | AT1G49010.1 | 54.328 | 335 | 99 | 11 | 1 | 302 | 1 | 314 | 7.01e-95 | 283 |
| Msa1300500 | AT5G08520.1 | 51.027 | 292 | 95 | 9 | 3 | 283 | 7 | 261 | 5.19e-81 | 247 |
| Msa1300500 | AT2G38090.1 | 45.050 | 202 | 93 | 2 | 5 | 206 | 26 | 209 | 9.02e-57 | 185 |
| Msa1300500 | AT5G58900.1 | 46.512 | 215 | 84 | 6 | 2 | 212 | 28 | 215 | 2.39e-54 | 179 |
| Msa1300500 | AT5G23650.1 | 44.643 | 224 | 96 | 5 | 3 | 224 | 8 | 205 | 5.15e-51 | 171 |
| Msa1300500 | AT5G01200.1 | 45.098 | 204 | 92 | 3 | 6 | 206 | 28 | 214 | 6.42e-51 | 169 |
| Msa1300500 | AT5G04760.1 | 41.553 | 219 | 91 | 4 | 8 | 226 | 6 | 187 | 1.23e-47 | 159 |
| Msa1300500 | AT5G05790.2 | 37.778 | 270 | 122 | 8 | 1 | 254 | 24 | 263 | 1.80e-47 | 160 |
| Msa1300500 | AT5G05790.1 | 37.778 | 270 | 122 | 8 | 1 | 254 | 24 | 263 | 1.80e-47 | 160 |
| Msa1300500 | AT3G11280.2 | 44.724 | 199 | 74 | 3 | 8 | 206 | 33 | 195 | 1.99e-47 | 160 |
| Msa1300500 | AT3G11280.1 | 44.724 | 199 | 74 | 3 | 8 | 206 | 33 | 195 | 1.99e-47 | 160 |
| Msa1300500 | AT5G47390.1 | 57.798 | 109 | 43 | 1 | 112 | 217 | 67 | 175 | 9.51e-35 | 129 |
| Msa1300500 | AT3G10580.2 | 38.356 | 219 | 86 | 9 | 1 | 219 | 1 | 170 | 2.00e-33 | 123 |
| Msa1300500 | AT3G10580.1 | 38.356 | 219 | 86 | 9 | 1 | 219 | 1 | 170 | 3.51e-33 | 124 |
| Msa1300500 | AT5G61620.1 | 38.265 | 196 | 89 | 7 | 112 | 298 | 84 | 256 | 7.03e-31 | 118 |
| Msa1300500 | AT5G56840.1 | 56.818 | 88 | 37 | 1 | 121 | 207 | 74 | 161 | 4.15e-29 | 111 |
| Msa1300500 | AT4G09450.1 | 35.683 | 227 | 92 | 7 | 8 | 229 | 7 | 184 | 3.35e-28 | 108 |
| Msa1300500 | AT1G70000.1 | 61.458 | 96 | 27 | 1 | 108 | 203 | 78 | 163 | 2.62e-27 | 107 |
| Msa1300500 | AT1G70000.2 | 61.458 | 96 | 27 | 1 | 108 | 203 | 78 | 163 | 2.62e-27 | 107 |
| Msa1300500 | AT1G74840.2 | 48.611 | 144 | 67 | 4 | 116 | 254 | 74 | 215 | 2.83e-26 | 104 |
| Msa1300500 | AT1G74840.1 | 48.611 | 144 | 67 | 4 | 116 | 254 | 74 | 215 | 3.17e-26 | 104 |
| Msa1300500 | AT3G16350.1 | 83.019 | 53 | 9 | 0 | 133 | 185 | 132 | 184 | 9.16e-26 | 105 |
| Msa1300500 | AT1G19000.2 | 55.556 | 108 | 45 | 2 | 128 | 235 | 92 | 196 | 1.17e-23 | 98.2 |
| Msa1300500 | AT1G19000.1 | 55.556 | 108 | 45 | 2 | 128 | 235 | 92 | 196 | 1.17e-23 | 98.2 |
| Msa1300500 | AT3G10590.1 | 47.917 | 96 | 48 | 2 | 123 | 217 | 96 | 190 | 4.60e-18 | 81.3 |
| Msa1300500 | AT4G39250.1 | 40.909 | 66 | 36 | 1 | 8 | 73 | 14 | 76 | 1.43e-12 | 63.2 |
| Msa1300500 | AT1G75250.2 | 39.437 | 71 | 40 | 1 | 3 | 73 | 7 | 74 | 1.91e-12 | 62.8 |
| Msa1300500 | AT1G75250.1 | 39.437 | 71 | 40 | 1 | 3 | 73 | 7 | 74 | 5.54e-12 | 62.4 |
Find 115 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGGATTTCTTTGGAATTA+TGG | 0.155681 | 8_3:+62087286 | None:intergenic |
| AAAAGATCAAGTTGTAATTT+TGG | 0.168041 | 8_3:-62086967 | Msa1300500:CDS |
| TCTAATTCATTAGCATAATT+TGG | 0.179151 | 8_3:+62087042 | None:intergenic |
| AGTTTAGGAGAGTTGGATTT+TGG | 0.179396 | 8_3:-62086015 | Msa1300500:three_prime_UTR |
| TTACTTGGTTTAGACAAATT+TGG | 0.202969 | 8_3:-62086525 | Msa1300500:CDS |
| CATCATCCTCCTGGTGGTTT+AGG | 0.251182 | 8_3:-62086240 | Msa1300500:CDS |
| CCAAGACCCACCACCTAATA+TGG | 0.252497 | 8_3:+62085636 | None:intergenic |
| GGCCCTTGGTTGGATTTCTT+TGG | 0.265789 | 8_3:+62087278 | None:intergenic |
| TTACCATGTTGACCTGTTAT+TGG | 0.282124 | 8_3:+62086321 | None:intergenic |
| TTCAAACAAAGATTCTTCTA+AGG | 0.298166 | 8_3:-62087007 | Msa1300500:CDS |
| CCATATTAGGTGGTGGGTCT+TGG | 0.302524 | 8_3:-62085636 | Msa1300500:three_prime_UTR |
| ACAAATTTGGAAAAGGAGAT+TGG | 0.304845 | 8_3:-62086512 | Msa1300500:CDS |
| CCTTCAAATACAATGGGTTT+AGG | 0.313838 | 8_3:-62086291 | Msa1300500:CDS |
| ATTTAGTAGATTTCCATATT+AGG | 0.323106 | 8_3:-62085649 | Msa1300500:three_prime_UTR |
| ATCTGTCCCCAACAAAAGTA+TGG | 0.337048 | 8_3:-62087136 | Msa1300500:CDS |
| AAAATAAAGTTTAGGAGAGT+TGG | 0.358256 | 8_3:-62086022 | Msa1300500:three_prime_UTR |
| CAAGGAACTTTGTGATATCT+AGG | 0.372284 | 8_3:-62086479 | Msa1300500:CDS |
| TGTTGCTCCTCCTGCTCATA+TGG | 0.385813 | 8_3:-62086187 | Msa1300500:CDS |
| TATAGAGGGTGCGCAGGATA+AGG | 0.387858 | 8_3:+62087415 | None:intergenic |
| ATAGAGGGTGCGCAGGATAA+GGG | 0.391973 | 8_3:+62087416 | None:intergenic |
| AATCATCAAGCACCAATAAC+AGG | 0.394644 | 8_3:-62086333 | Msa1300500:CDS |
| CCTAAACCCATTGTATTTGA+AGG | 0.400664 | 8_3:+62086291 | None:intergenic |
| ATCCACCTTTACCACTACTA+TGG | 0.406819 | 8_3:+62086908 | None:intergenic |
| GAATTTGAGGAATTCAATAA+TGG | 0.408130 | 8_3:-62085705 | Msa1300500:three_prime_UTR |
| GGATGATGGGGAAGCATAAC+AGG | 0.408632 | 8_3:+62086147 | None:intergenic |
| TTTGGAGGCTCATCAGGGTC+GGG | 0.408890 | 8_3:-62085997 | Msa1300500:three_prime_UTR |
| TTCTTCTTCATAGCTCCAAA+TGG | 0.430907 | 8_3:+62087236 | None:intergenic |
| CTTGATGACATGTTGGCCCT+TGG | 0.437686 | 8_3:+62087264 | None:intergenic |
| CCTGGTGGTTTAGGAATGTA+TGG | 0.438589 | 8_3:-62086231 | Msa1300500:CDS |
| CTTAACTTTCCACATAAAAG+AGG | 0.441939 | 8_3:+62085775 | None:intergenic |
| TGTCATCAAGTGGAGCCATT+TGG | 0.441940 | 8_3:-62087251 | Msa1300500:CDS |
| GCTCATATGGCATCTGCAGT+TGG | 0.444181 | 8_3:-62086174 | Msa1300500:CDS |
| AGTTGTCATTGGTGCATTGT+TGG | 0.444498 | 8_3:+62086075 | None:intergenic |
| ACATGACATGATCATAATCT+TGG | 0.445405 | 8_3:+62085550 | None:intergenic |
| ATGCACAAAAGTATTTCATA+AGG | 0.449793 | 8_3:-62086434 | Msa1300500:CDS |
| AGAAGATTCAAAAGAACAAT+GGG | 0.451020 | 8_3:-62087172 | Msa1300500:CDS |
| CTATGCTCTTCTTCTGTCCA+TGG | 0.458260 | 8_3:+62086838 | None:intergenic |
| CTCATATGGCATCTGCAGTT+GGG | 0.466530 | 8_3:-62086173 | Msa1300500:CDS |
| GCATGACTTGCTACTTGTGT+TGG | 0.467928 | 8_3:+62086453 | None:intergenic |
| ATTCAAAGTTAGATTCTTGT+GGG | 0.467971 | 8_3:-62085895 | Msa1300500:three_prime_UTR |
| CCAACATTGGTTGGTTCAGT+TGG | 0.475875 | 8_3:+62085854 | None:intergenic |
| TAGATTTCCATATTAGGTGG+TGG | 0.480073 | 8_3:-62085643 | Msa1300500:three_prime_UTR |
| ACAATCCCTTCAAATACAAT+GGG | 0.480739 | 8_3:-62086297 | Msa1300500:CDS |
| CACAATCCCTTCAAATACAA+TGG | 0.482952 | 8_3:-62086298 | Msa1300500:CDS |
| CAAAGTTTAGAGAATGAGAA+TGG | 0.483834 | 8_3:+62087311 | None:intergenic |
| GGTTTAGACAAATTTGGAAA+AGG | 0.486380 | 8_3:-62086519 | Msa1300500:CDS |
| TCAGAACAAGAAAGGAGAAA+AGG | 0.492641 | 8_3:-62086865 | Msa1300500:CDS |
| GCAACAACAGGATGTCCAAC+TGG | 0.493168 | 8_3:+62086204 | None:intergenic |
| TGTTAACACTAGTAATATCA+TGG | 0.493710 | 8_3:+62086373 | None:intergenic |
| ATGACATGTTGGCCCTTGGT+TGG | 0.495450 | 8_3:+62087268 | None:intergenic |
| TGAGCAGGAGGAGCAACAAC+AGG | 0.495632 | 8_3:+62086192 | None:intergenic |
| TATGATTATATTAAATTCGA+AGG | 0.499746 | 8_3:-62085597 | Msa1300500:three_prime_UTR |
| CTAAACCCATTGTATTTGAA+GGG | 0.499951 | 8_3:+62086292 | None:intergenic |
| ATGGTGAAATTAATTGAAGA+TGG | 0.500024 | 8_3:+62087330 | None:intergenic |
| GTGGATGATGATGAGGATGA+TGG | 0.500151 | 8_3:+62086133 | None:intergenic |
| TACATGACATGGTAGTATAG+AGG | 0.500647 | 8_3:+62087400 | None:intergenic |
| CATCATCATCAGAACAAGAA+AGG | 0.501232 | 8_3:-62086873 | Msa1300500:CDS |
| GTTCAGCCTCATCATCCTCC+TGG | 0.503699 | 8_3:-62086249 | Msa1300500:CDS |
| TGGATGATGATGAGGATGAT+GGG | 0.504027 | 8_3:+62086134 | None:intergenic |
| TGTACCTCTTGCTTACCCTA+TGG | 0.504295 | 8_3:-62086103 | Msa1300500:CDS |
| TAAGCAAGAGGTACAACATA+AGG | 0.508613 | 8_3:+62086111 | None:intergenic |
| TGCATTGTTGGAGGTGCCAT+AGG | 0.508759 | 8_3:+62086087 | None:intergenic |
| TGTCATTGGTGCATTGTTGG+AGG | 0.512443 | 8_3:+62086078 | None:intergenic |
| AGAATGCTATAGCCATGCAT+TGG | 0.517213 | 8_3:-62087203 | Msa1300500:CDS |
| CACCTTTACCACTACTATGG+TGG | 0.519881 | 8_3:+62086911 | None:intergenic |
| TTGGAGGCTCATCAGGGTCG+GGG | 0.520313 | 8_3:-62085996 | Msa1300500:three_prime_UTR |
| TAACAACAAATAAAAGAAAG+AGG | 0.520903 | 8_3:+62085824 | None:intergenic |
| AATTCAAAGTTAGATTCTTG+TGG | 0.528667 | 8_3:-62085896 | Msa1300500:three_prime_UTR |
| CCAACTGAACCAACCAATGT+TGG | 0.532207 | 8_3:-62085854 | Msa1300500:three_prime_UTR |
| GGAGTTGAGCCAACATTGGT+TGG | 0.541325 | 8_3:+62085845 | None:intergenic |
| ACCCACCATAGTAGTGGTAA+AGG | 0.542637 | 8_3:-62086913 | Msa1300500:CDS |
| AAGAAGATTCAAAAGAACAA+TGG | 0.544714 | 8_3:-62087173 | Msa1300500:CDS |
| GAGATTGGAGAAGTATATCA+AGG | 0.547704 | 8_3:-62086497 | Msa1300500:CDS |
| AAAGGAGAAAAGGAATTCCA+TGG | 0.553013 | 8_3:-62086855 | Msa1300500:CDS |
| ACTGCAGATGCCATATGAGC+AGG | 0.554621 | 8_3:+62086177 | None:intergenic |
| GGAATGTATGGAGCACCAGT+TGG | 0.557234 | 8_3:-62086219 | Msa1300500:CDS |
| TAGAGGGTGCGCAGGATAAG+GGG | 0.559815 | 8_3:+62087417 | None:intergenic |
| AGATTTCCATATTAGGTGGT+GGG | 0.563407 | 8_3:-62085642 | Msa1300500:three_prime_UTR |
| TAACATCATCTGCCAACACT+TGG | 0.564260 | 8_3:+62087094 | None:intergenic |
| CACCGATGAGATTCTCACAT+TGG | 0.569973 | 8_3:-62085925 | Msa1300500:three_prime_UTR |
| CAATGAATAGAGATAGAAGA+AGG | 0.573297 | 8_3:-62086404 | Msa1300500:CDS |
| AAGAGGAGTTGAGCCAACAT+TGG | 0.577251 | 8_3:+62085841 | None:intergenic |
| TGGTAGTATAGAGGGTGCGC+AGG | 0.586308 | 8_3:+62087409 | None:intergenic |
| ACCTTTACCACTACTATGGT+GGG | 0.587562 | 8_3:+62086912 | None:intergenic |
| AACTATTTATTAGCATCTCT+AGG | 0.588023 | 8_3:+62085525 | None:intergenic |
| TGAGATTCTCACATTGGCTG+CGG | 0.588089 | 8_3:-62085919 | Msa1300500:three_prime_UTR |
| TAGTAGATTTCCATATTAGG+TGG | 0.590632 | 8_3:-62085646 | Msa1300500:three_prime_UTR |
| CAGCCTCATCATCCTCCTGG+TGG | 0.590947 | 8_3:-62086246 | Msa1300500:CDS |
| TGGTGAAATTAATTGAAGAT+GGG | 0.591913 | 8_3:+62087331 | None:intergenic |
| CACCATAGTAGTGGTAAAGG+TGG | 0.591929 | 8_3:-62086910 | Msa1300500:CDS |
| ACATGACATGGTAGTATAGA+GGG | 0.592564 | 8_3:+62087401 | None:intergenic |
| AGATGATGTTAGTGCAATTG+AGG | 0.593055 | 8_3:-62087082 | Msa1300500:CDS |
| GAAACAACATTACCAAGTGT+TGG | 0.597849 | 8_3:-62087106 | Msa1300500:CDS |
| GGATGATGATGAGGATGATG+GGG | 0.600297 | 8_3:+62086135 | None:intergenic |
| GCAAGAGGTACAACATAAGG+TGG | 0.601447 | 8_3:+62086114 | None:intergenic |
| GATGTTAGTGCAATTGAGGA+AGG | 0.604039 | 8_3:-62087078 | Msa1300500:CDS |
| GGCTCCACTTGATGACATGT+TGG | 0.607903 | 8_3:+62087257 | None:intergenic |
| TTCCAAAGAAATCCAACCAA+GGG | 0.612163 | 8_3:-62087280 | Msa1300500:five_prime_UTR |
| AGGGCCAACATGTCATCAAG+TGG | 0.623051 | 8_3:-62087261 | Msa1300500:exon |
| CCATACATTCCTAAACCACC+AGG | 0.623664 | 8_3:+62086231 | None:intergenic |
| GACTCTACCCACCATAGTAG+TGG | 0.624946 | 8_3:-62086919 | Msa1300500:CDS |
| AAACCACCAGGAGGATGATG+AGG | 0.627717 | 8_3:+62086243 | None:intergenic |
| GTGGTAAAGGTGGATTGTCA+AGG | 0.632578 | 8_3:-62086900 | Msa1300500:CDS |
| GCATTGTTGGAGGTGCCATA+GGG | 0.632899 | 8_3:+62086088 | None:intergenic |
| CATGGACAGAAGAAGAGCAT+AGG | 0.635255 | 8_3:-62086837 | Msa1300500:intron |
| GATATTACTAGTGTTAACAA+TGG | 0.637555 | 8_3:-62086369 | Msa1300500:CDS |
| GACTCAGAGTGTAGTGACAG+AGG | 0.638042 | 8_3:-62085963 | Msa1300500:three_prime_UTR |
| GCACCAATAACAGGTCAACA+TGG | 0.640651 | 8_3:-62086324 | Msa1300500:CDS |
| AGCCAATGTGAGAATCTCAT+CGG | 0.643639 | 8_3:+62085923 | None:intergenic |
| GCAGATGCCATATGAGCAGG+AGG | 0.646062 | 8_3:+62086180 | None:intergenic |
| ACATAAGGTGGATGATGATG+AGG | 0.659765 | 8_3:+62086126 | None:intergenic |
| GAATTTGTCTCTACATGACA+TGG | 0.661482 | 8_3:+62087389 | None:intergenic |
| ATTCCAAAGAAATCCAACCA+AGG | 0.673272 | 8_3:-62087281 | Msa1300500:five_prime_UTR |
| GGTGCCATAGGGTAAGCAAG+AGG | 0.704654 | 8_3:+62086099 | None:intergenic |
| TACATTCCTAAACCACCAGG+AGG | 0.734599 | 8_3:+62086234 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTTCTTTTTTTTTTTC+AGG | - | chr8_3:62086392-62086411 | Msa1300500:CDS | 15.0% |
| !! | TATGATTATATTAAATTCGA+AGG | - | chr8_3:62087349-62087368 | Msa1300500:five_prime_UTR | 15.0% |
| !!! | TTTGTTTCTTTTTTTTTTTC+AGG | - | chr8_3:62086392-62086411 | Msa1300500:CDS | 15.0% |
| !! | TATGATTATATTAAATTCGA+AGG | - | chr8_3:62087349-62087368 | Msa1300500:five_prime_UTR | 15.0% |
| !! | TCTAATTCATTAGCATAATT+TGG | + | chr8_3:62085907-62085926 | None:intergenic | 20.0% |
| !!! | AAAAGATCAAGTTGTAATTT+TGG | - | chr8_3:62085979-62085998 | Msa1300500:three_prime_UTR | 20.0% |
| !! | TTCAAGGTAATTAATTAACA+TGG | - | chr8_3:62086345-62086364 | Msa1300500:CDS | 20.0% |
| !!! | TTTTTCAGGTTATTTTTACT+TGG | - | chr8_3:62086406-62086425 | Msa1300500:CDS | 20.0% |
| !! | AAAAAAAAAAGAGTTGTCAT+TGG | + | chr8_3:62086885-62086904 | None:intergenic | 20.0% |
| !!! | TTTTGTCGAAAATAAAGTTT+AGG | - | chr8_3:62086916-62086935 | Msa1300500:CDS | 20.0% |
| !! | TAACAACAAATAAAAGAAAG+AGG | + | chr8_3:62087125-62087144 | None:intergenic | 20.0% |
| !!! | ATTTGTTGTTAGTTTTTATG+AGG | - | chr8_3:62087134-62087153 | Msa1300500:CDS | 20.0% |
| !! | ATTTACTCAAAAAGAATTTG+AGG | - | chr8_3:62087228-62087247 | Msa1300500:CDS | 20.0% |
| !! | ATTTAGTAGATTTCCATATT+AGG | - | chr8_3:62087297-62087316 | Msa1300500:five_prime_UTR | 20.0% |
| !! | TCTAATTCATTAGCATAATT+TGG | + | chr8_3:62085907-62085926 | None:intergenic | 20.0% |
| !!! | AAAAGATCAAGTTGTAATTT+TGG | - | chr8_3:62085979-62085998 | Msa1300500:three_prime_UTR | 20.0% |
| !! | TTCAAGGTAATTAATTAACA+TGG | - | chr8_3:62086345-62086364 | Msa1300500:CDS | 20.0% |
| !!! | TTTTTCAGGTTATTTTTACT+TGG | - | chr8_3:62086406-62086425 | Msa1300500:CDS | 20.0% |
| !! | AAAAAAAAAAGAGTTGTCAT+TGG | + | chr8_3:62086885-62086904 | None:intergenic | 20.0% |
| !!! | TTTTGTCGAAAATAAAGTTT+AGG | - | chr8_3:62086916-62086935 | Msa1300500:CDS | 20.0% |
| !! | TAACAACAAATAAAAGAAAG+AGG | + | chr8_3:62087125-62087144 | None:intergenic | 20.0% |
| !!! | ATTTGTTGTTAGTTTTTATG+AGG | - | chr8_3:62087134-62087153 | Msa1300500:CDS | 20.0% |
| !! | ATTTACTCAAAAAGAATTTG+AGG | - | chr8_3:62087228-62087247 | Msa1300500:CDS | 20.0% |
| !! | ATTTAGTAGATTTCCATATT+AGG | - | chr8_3:62087297-62087316 | Msa1300500:five_prime_UTR | 20.0% |
| ! | TGGTGAAATTAATTGAAGAT+GGG | + | chr8_3:62085618-62085637 | None:intergenic | 25.0% |
| ! | ATGGTGAAATTAATTGAAGA+TGG | + | chr8_3:62085619-62085638 | None:intergenic | 25.0% |
| ! | AAGAAGATTCAAAAGAACAA+TGG | - | chr8_3:62085773-62085792 | Msa1300500:three_prime_UTR | 25.0% |
| ! | AGAAGATTCAAAAGAACAAT+GGG | - | chr8_3:62085774-62085793 | Msa1300500:three_prime_UTR | 25.0% |
| ! | TTCAAACAAAGATTCTTCTA+AGG | - | chr8_3:62085939-62085958 | Msa1300500:three_prime_UTR | 25.0% |
| ! | TCGATGAACAATTATATGAA+GGG | + | chr8_3:62086170-62086189 | None:intergenic | 25.0% |
| ! | ATCGATGAACAATTATATGA+AGG | + | chr8_3:62086171-62086190 | None:intergenic | 25.0% |
| ! | ATGAAATATATTTGTGCACA+CGG | + | chr8_3:62086277-62086296 | None:intergenic | 25.0% |
| ! | AGATGTACAAAATTTCAACA+AGG | - | chr8_3:62086311-62086330 | Msa1300500:CDS | 25.0% |
| ! | TTACTTGGTTTAGACAAATT+TGG | - | chr8_3:62086421-62086440 | Msa1300500:CDS | 25.0% |
| !!! | ATGCACAAAAGTATTTCATA+AGG | - | chr8_3:62086512-62086531 | Msa1300500:CDS | 25.0% |
| ! | TGTTAACACTAGTAATATCA+TGG | + | chr8_3:62086576-62086595 | None:intergenic | 25.0% |
| ! | GATATTACTAGTGTTAACAA+TGG | - | chr8_3:62086577-62086596 | Msa1300500:intron | 25.0% |
| ! | AAAATAAAGTTTAGGAGAGT+TGG | - | chr8_3:62086924-62086943 | Msa1300500:CDS | 25.0% |
| ! | AATTCAAAGTTAGATTCTTG+TGG | - | chr8_3:62087050-62087069 | Msa1300500:CDS | 25.0% |
| ! | ATTCAAAGTTAGATTCTTGT+GGG | - | chr8_3:62087051-62087070 | Msa1300500:CDS | 25.0% |
| !! | AAGAAAAATCCTCTTTTATG+TGG | - | chr8_3:62087162-62087181 | Msa1300500:CDS | 25.0% |
| ! | GAATTTGAGGAATTCAATAA+TGG | - | chr8_3:62087241-62087260 | Msa1300500:CDS | 25.0% |
| ! | AACTATTTATTAGCATCTCT+AGG | + | chr8_3:62087424-62087443 | None:intergenic | 25.0% |
| ! | TGGTGAAATTAATTGAAGAT+GGG | + | chr8_3:62085618-62085637 | None:intergenic | 25.0% |
| ! | ATGGTGAAATTAATTGAAGA+TGG | + | chr8_3:62085619-62085638 | None:intergenic | 25.0% |
| ! | AAGAAGATTCAAAAGAACAA+TGG | - | chr8_3:62085773-62085792 | Msa1300500:three_prime_UTR | 25.0% |
| ! | AGAAGATTCAAAAGAACAAT+GGG | - | chr8_3:62085774-62085793 | Msa1300500:three_prime_UTR | 25.0% |
| ! | TTCAAACAAAGATTCTTCTA+AGG | - | chr8_3:62085939-62085958 | Msa1300500:three_prime_UTR | 25.0% |
| ! | TCGATGAACAATTATATGAA+GGG | + | chr8_3:62086170-62086189 | None:intergenic | 25.0% |
| ! | ATCGATGAACAATTATATGA+AGG | + | chr8_3:62086171-62086190 | None:intergenic | 25.0% |
| ! | ATGAAATATATTTGTGCACA+CGG | + | chr8_3:62086277-62086296 | None:intergenic | 25.0% |
| ! | AGATGTACAAAATTTCAACA+AGG | - | chr8_3:62086311-62086330 | Msa1300500:CDS | 25.0% |
| ! | TTACTTGGTTTAGACAAATT+TGG | - | chr8_3:62086421-62086440 | Msa1300500:CDS | 25.0% |
| !!! | ATGCACAAAAGTATTTCATA+AGG | - | chr8_3:62086512-62086531 | Msa1300500:CDS | 25.0% |
| ! | TGTTAACACTAGTAATATCA+TGG | + | chr8_3:62086576-62086595 | None:intergenic | 25.0% |
| ! | GATATTACTAGTGTTAACAA+TGG | - | chr8_3:62086577-62086596 | Msa1300500:intron | 25.0% |
| ! | AAAATAAAGTTTAGGAGAGT+TGG | - | chr8_3:62086924-62086943 | Msa1300500:CDS | 25.0% |
| ! | AATTCAAAGTTAGATTCTTG+TGG | - | chr8_3:62087050-62087069 | Msa1300500:CDS | 25.0% |
| ! | ATTCAAAGTTAGATTCTTGT+GGG | - | chr8_3:62087051-62087070 | Msa1300500:CDS | 25.0% |
| !! | AAGAAAAATCCTCTTTTATG+TGG | - | chr8_3:62087162-62087181 | Msa1300500:CDS | 25.0% |
| ! | GAATTTGAGGAATTCAATAA+TGG | - | chr8_3:62087241-62087260 | Msa1300500:CDS | 25.0% |
| ! | AACTATTTATTAGCATCTCT+AGG | + | chr8_3:62087424-62087443 | None:intergenic | 25.0% |
| ! | AATGTAAGTCTTTTTGTGAG+TGG | + | chr8_3:62085582-62085601 | None:intergenic | 30.0% |
| CAAAGTTTAGAGAATGAGAA+TGG | + | chr8_3:62085638-62085657 | None:intergenic | 30.0% | |
| !! | GTTGGATTTCTTTGGAATTA+TGG | + | chr8_3:62085663-62085682 | None:intergenic | 30.0% |
| !!! | TTCTTTTTCAATCCAATGCA+TGG | + | chr8_3:62085758-62085777 | None:intergenic | 30.0% |
| ! | ACTTGTTCCATACTTTTGTT+GGG | + | chr8_3:62085820-62085839 | None:intergenic | 30.0% |
| ! | TGATCTTTTATCTGAACTTG+TGG | + | chr8_3:62085968-62085987 | None:intergenic | 30.0% |
| !! | TCAAGTTGTAATTTTGGAAG+TGG | - | chr8_3:62085985-62086004 | Msa1300500:three_prime_UTR | 30.0% |
| !! | CAAGTTGTAATTTTGGAAGT+GGG | - | chr8_3:62085986-62086005 | Msa1300500:three_prime_UTR | 30.0% |
| CAAGGATTCATTTCAATTCA+AGG | - | chr8_3:62086329-62086348 | Msa1300500:CDS | 30.0% | |
| GGTTTAGACAAATTTGGAAA+AGG | - | chr8_3:62086427-62086446 | Msa1300500:CDS | 30.0% | |
| ACAAATTTGGAAAAGGAGAT+TGG | - | chr8_3:62086434-62086453 | Msa1300500:CDS | 30.0% | |
| CAATGAATAGAGATAGAAGA+AGG | - | chr8_3:62086542-62086561 | Msa1300500:intron | 30.0% | |
| ACAATCCCTTCAAATACAAT+GGG | - | chr8_3:62086649-62086668 | Msa1300500:intron | 30.0% | |
| CTAAACCCATTGTATTTGAA+GGG | + | chr8_3:62086657-62086676 | None:intergenic | 30.0% | |
| CTTAACTTTCCACATAAAAG+AGG | + | chr8_3:62087174-62087193 | None:intergenic | 30.0% | |
| TAGTAGATTTCCATATTAGG+TGG | - | chr8_3:62087300-62087319 | Msa1300500:five_prime_UTR | 30.0% | |
| ACATGACATGATCATAATCT+TGG | + | chr8_3:62087399-62087418 | None:intergenic | 30.0% | |
| ! | AATGTAAGTCTTTTTGTGAG+TGG | + | chr8_3:62085582-62085601 | None:intergenic | 30.0% |
| CAAAGTTTAGAGAATGAGAA+TGG | + | chr8_3:62085638-62085657 | None:intergenic | 30.0% | |
| !! | GTTGGATTTCTTTGGAATTA+TGG | + | chr8_3:62085663-62085682 | None:intergenic | 30.0% |
| !!! | TTCTTTTTCAATCCAATGCA+TGG | + | chr8_3:62085758-62085777 | None:intergenic | 30.0% |
| ! | ACTTGTTCCATACTTTTGTT+GGG | + | chr8_3:62085820-62085839 | None:intergenic | 30.0% |
| ! | TGATCTTTTATCTGAACTTG+TGG | + | chr8_3:62085968-62085987 | None:intergenic | 30.0% |
| !! | TCAAGTTGTAATTTTGGAAG+TGG | - | chr8_3:62085985-62086004 | Msa1300500:three_prime_UTR | 30.0% |
| !! | CAAGTTGTAATTTTGGAAGT+GGG | - | chr8_3:62085986-62086005 | Msa1300500:three_prime_UTR | 30.0% |
| CAAGGATTCATTTCAATTCA+AGG | - | chr8_3:62086329-62086348 | Msa1300500:CDS | 30.0% | |
| GGTTTAGACAAATTTGGAAA+AGG | - | chr8_3:62086427-62086446 | Msa1300500:CDS | 30.0% | |
| ACAAATTTGGAAAAGGAGAT+TGG | - | chr8_3:62086434-62086453 | Msa1300500:CDS | 30.0% | |
| CAATGAATAGAGATAGAAGA+AGG | - | chr8_3:62086542-62086561 | Msa1300500:intron | 30.0% | |
| ACAATCCCTTCAAATACAAT+GGG | - | chr8_3:62086649-62086668 | Msa1300500:intron | 30.0% | |
| CTAAACCCATTGTATTTGAA+GGG | + | chr8_3:62086657-62086676 | None:intergenic | 30.0% | |
| CTTAACTTTCCACATAAAAG+AGG | + | chr8_3:62087174-62087193 | None:intergenic | 30.0% | |
| TAGTAGATTTCCATATTAGG+TGG | - | chr8_3:62087300-62087319 | Msa1300500:five_prime_UTR | 30.0% | |
| ACATGACATGATCATAATCT+TGG | + | chr8_3:62087399-62087418 | None:intergenic | 30.0% | |
| ACATGACATGGTAGTATAGA+GGG | + | chr8_3:62085548-62085567 | None:intergenic | 35.0% | |
| TACATGACATGGTAGTATAG+AGG | + | chr8_3:62085549-62085568 | None:intergenic | 35.0% | |
| GAATTTGTCTCTACATGACA+TGG | + | chr8_3:62085560-62085579 | None:intergenic | 35.0% | |
| ATTCCAAAGAAATCCAACCA+AGG | - | chr8_3:62085665-62085684 | Msa1300500:three_prime_UTR | 35.0% | |
| TTCCAAAGAAATCCAACCAA+GGG | - | chr8_3:62085666-62085685 | Msa1300500:three_prime_UTR | 35.0% | |
| TTCTTCTTCATAGCTCCAAA+TGG | + | chr8_3:62085713-62085732 | None:intergenic | 35.0% | |
| ! | CTTGTTCCATACTTTTGTTG+GGG | + | chr8_3:62085819-62085838 | None:intergenic | 35.0% |
| ! | CACTTGTTCCATACTTTTGT+TGG | + | chr8_3:62085821-62085840 | None:intergenic | 35.0% |
| GAAACAACATTACCAAGTGT+TGG | - | chr8_3:62085840-62085859 | Msa1300500:three_prime_UTR | 35.0% | |
| AGATGATGTTAGTGCAATTG+AGG | - | chr8_3:62085864-62085883 | Msa1300500:three_prime_UTR | 35.0% | |
| ! | TCTTTTATCTGAACTTGTGG+TGG | + | chr8_3:62085965-62085984 | None:intergenic | 35.0% |
| !! | AATTTTGGAAGTGGGTTTTC+TGG | - | chr8_3:62085994-62086013 | Msa1300500:three_prime_UTR | 35.0% |
| CATCATCATCAGAACAAGAA+AGG | - | chr8_3:62086073-62086092 | Msa1300500:exon | 35.0% | |
| TCAGAACAAGAAAGGAGAAA+AGG | - | chr8_3:62086081-62086100 | Msa1300500:CDS | 35.0% | |
| AAAGGAGAAAAGGAATTCCA+TGG | - | chr8_3:62086091-62086110 | Msa1300500:CDS | 35.0% | |
| ! | GAGATTGGAGAAGTATATCA+AGG | - | chr8_3:62086449-62086468 | Msa1300500:CDS | 35.0% |
| CAAGGAACTTTGTGATATCT+AGG | - | chr8_3:62086467-62086486 | Msa1300500:CDS | 35.0% | |
| AATCATCAAGCACCAATAAC+AGG | - | chr8_3:62086613-62086632 | Msa1300500:intron | 35.0% | |
| TTACCATGTTGACCTGTTAT+TGG | + | chr8_3:62086628-62086647 | None:intergenic | 35.0% | |
| CACAATCCCTTCAAATACAA+TGG | - | chr8_3:62086648-62086667 | Msa1300500:intron | 35.0% | |
| CCTAAACCCATTGTATTTGA+AGG | + | chr8_3:62086658-62086677 | None:intergenic | 35.0% | |
| ! | CCTTCAAATACAATGGGTTT+AGG | - | chr8_3:62086655-62086674 | Msa1300500:intron | 35.0% |
| ! | TAAGCAAGAGGTACAACATA+AGG | + | chr8_3:62086838-62086857 | None:intergenic | 35.0% |
| ! | AGTTTAGGAGAGTTGGATTT+TGG | - | chr8_3:62086931-62086950 | Msa1300500:CDS | 35.0% |
| TAGATTTCCATATTAGGTGG+TGG | - | chr8_3:62087303-62087322 | Msa1300500:five_prime_UTR | 35.0% | |
| AGATTTCCATATTAGGTGGT+GGG | - | chr8_3:62087304-62087323 | Msa1300500:five_prime_UTR | 35.0% | |
| ACATGACATGGTAGTATAGA+GGG | + | chr8_3:62085548-62085567 | None:intergenic | 35.0% | |
| TACATGACATGGTAGTATAG+AGG | + | chr8_3:62085549-62085568 | None:intergenic | 35.0% | |
| GAATTTGTCTCTACATGACA+TGG | + | chr8_3:62085560-62085579 | None:intergenic | 35.0% | |
| ATTCCAAAGAAATCCAACCA+AGG | - | chr8_3:62085665-62085684 | Msa1300500:three_prime_UTR | 35.0% | |
| TTCCAAAGAAATCCAACCAA+GGG | - | chr8_3:62085666-62085685 | Msa1300500:three_prime_UTR | 35.0% | |
| TTCTTCTTCATAGCTCCAAA+TGG | + | chr8_3:62085713-62085732 | None:intergenic | 35.0% | |
| ! | CTTGTTCCATACTTTTGTTG+GGG | + | chr8_3:62085819-62085838 | None:intergenic | 35.0% |
| ! | CACTTGTTCCATACTTTTGT+TGG | + | chr8_3:62085821-62085840 | None:intergenic | 35.0% |
| GAAACAACATTACCAAGTGT+TGG | - | chr8_3:62085840-62085859 | Msa1300500:three_prime_UTR | 35.0% | |
| AGATGATGTTAGTGCAATTG+AGG | - | chr8_3:62085864-62085883 | Msa1300500:three_prime_UTR | 35.0% | |
| ! | TCTTTTATCTGAACTTGTGG+TGG | + | chr8_3:62085965-62085984 | None:intergenic | 35.0% |
| !! | AATTTTGGAAGTGGGTTTTC+TGG | - | chr8_3:62085994-62086013 | Msa1300500:three_prime_UTR | 35.0% |
| CATCATCATCAGAACAAGAA+AGG | - | chr8_3:62086073-62086092 | Msa1300500:exon | 35.0% | |
| TCAGAACAAGAAAGGAGAAA+AGG | - | chr8_3:62086081-62086100 | Msa1300500:CDS | 35.0% | |
| AAAGGAGAAAAGGAATTCCA+TGG | - | chr8_3:62086091-62086110 | Msa1300500:CDS | 35.0% | |
| ! | GAGATTGGAGAAGTATATCA+AGG | - | chr8_3:62086449-62086468 | Msa1300500:CDS | 35.0% |
| CAAGGAACTTTGTGATATCT+AGG | - | chr8_3:62086467-62086486 | Msa1300500:CDS | 35.0% | |
| AATCATCAAGCACCAATAAC+AGG | - | chr8_3:62086613-62086632 | Msa1300500:intron | 35.0% | |
| TTACCATGTTGACCTGTTAT+TGG | + | chr8_3:62086628-62086647 | None:intergenic | 35.0% | |
| CACAATCCCTTCAAATACAA+TGG | - | chr8_3:62086648-62086667 | Msa1300500:intron | 35.0% | |
| CCTAAACCCATTGTATTTGA+AGG | + | chr8_3:62086658-62086677 | None:intergenic | 35.0% | |
| ! | CCTTCAAATACAATGGGTTT+AGG | - | chr8_3:62086655-62086674 | Msa1300500:intron | 35.0% |
| ! | TAAGCAAGAGGTACAACATA+AGG | + | chr8_3:62086838-62086857 | None:intergenic | 35.0% |
| ! | AGTTTAGGAGAGTTGGATTT+TGG | - | chr8_3:62086931-62086950 | Msa1300500:CDS | 35.0% |
| TAGATTTCCATATTAGGTGG+TGG | - | chr8_3:62087303-62087322 | Msa1300500:five_prime_UTR | 35.0% | |
| AGATTTCCATATTAGGTGGT+GGG | - | chr8_3:62087304-62087323 | Msa1300500:five_prime_UTR | 35.0% | |
| AGAATGCTATAGCCATGCAT+TGG | - | chr8_3:62085743-62085762 | Msa1300500:three_prime_UTR | 40.0% | |
| ATCTGTCCCCAACAAAAGTA+TGG | - | chr8_3:62085810-62085829 | Msa1300500:three_prime_UTR | 40.0% | |
| TAACATCATCTGCCAACACT+TGG | + | chr8_3:62085855-62085874 | None:intergenic | 40.0% | |
| GATGTTAGTGCAATTGAGGA+AGG | - | chr8_3:62085868-62085887 | Msa1300500:three_prime_UTR | 40.0% | |
| ACCTTTACCACTACTATGGT+GGG | + | chr8_3:62086037-62086056 | None:intergenic | 40.0% | |
| ATCCACCTTTACCACTACTA+TGG | + | chr8_3:62086041-62086060 | None:intergenic | 40.0% | |
| ! | TGGATGATGATGAGGATGAT+GGG | + | chr8_3:62086815-62086834 | None:intergenic | 40.0% |
| ! | ACATAAGGTGGATGATGATG+AGG | + | chr8_3:62086823-62086842 | None:intergenic | 40.0% |
| AGTTGTCATTGGTGCATTGT+TGG | + | chr8_3:62086874-62086893 | None:intergenic | 40.0% | |
| ! | TTAGGAGAGTTGGATTTTGG+AGG | - | chr8_3:62086934-62086953 | Msa1300500:CDS | 40.0% |
| AGCCAATGTGAGAATCTCAT+CGG | + | chr8_3:62087026-62087045 | None:intergenic | 40.0% | |
| AGAATGCTATAGCCATGCAT+TGG | - | chr8_3:62085743-62085762 | Msa1300500:three_prime_UTR | 40.0% | |
| ATCTGTCCCCAACAAAAGTA+TGG | - | chr8_3:62085810-62085829 | Msa1300500:three_prime_UTR | 40.0% | |
| TAACATCATCTGCCAACACT+TGG | + | chr8_3:62085855-62085874 | None:intergenic | 40.0% | |
| GATGTTAGTGCAATTGAGGA+AGG | - | chr8_3:62085868-62085887 | Msa1300500:three_prime_UTR | 40.0% | |
| ACCTTTACCACTACTATGGT+GGG | + | chr8_3:62086037-62086056 | None:intergenic | 40.0% | |
| ATCCACCTTTACCACTACTA+TGG | + | chr8_3:62086041-62086060 | None:intergenic | 40.0% | |
| ! | TGGATGATGATGAGGATGAT+GGG | + | chr8_3:62086815-62086834 | None:intergenic | 40.0% |
| ! | ACATAAGGTGGATGATGATG+AGG | + | chr8_3:62086823-62086842 | None:intergenic | 40.0% |
| AGTTGTCATTGGTGCATTGT+TGG | + | chr8_3:62086874-62086893 | None:intergenic | 40.0% | |
| ! | TTAGGAGAGTTGGATTTTGG+AGG | - | chr8_3:62086934-62086953 | Msa1300500:CDS | 40.0% |
| AGCCAATGTGAGAATCTCAT+CGG | + | chr8_3:62087026-62087045 | None:intergenic | 40.0% | |
| TGTCATCAAGTGGAGCCATT+TGG | - | chr8_3:62085695-62085714 | Msa1300500:three_prime_UTR | 45.0% | |
| !!! | GGAAGTGGGTTTTCTGGTTT+AGG | - | chr8_3:62086000-62086019 | Msa1300500:three_prime_UTR | 45.0% |
| ACCCACCATAGTAGTGGTAA+AGG | - | chr8_3:62086033-62086052 | Msa1300500:three_prime_UTR | 45.0% | |
| CACCTTTACCACTACTATGG+TGG | + | chr8_3:62086038-62086057 | None:intergenic | 45.0% | |
| CACCATAGTAGTGGTAAAGG+TGG | - | chr8_3:62086036-62086055 | Msa1300500:three_prime_UTR | 45.0% | |
| !! | GTGGTAAAGGTGGATTGTCA+AGG | - | chr8_3:62086046-62086065 | Msa1300500:three_prime_UTR | 45.0% |
| CTATGCTCTTCTTCTGTCCA+TGG | + | chr8_3:62086111-62086130 | None:intergenic | 45.0% | |
| ! | CATGGACAGAAGAAGAGCAT+AGG | - | chr8_3:62086109-62086128 | Msa1300500:CDS | 45.0% |
| !! | GCATGACTTGCTACTTGTGT+TGG | + | chr8_3:62086496-62086515 | None:intergenic | 45.0% |
| GCACCAATAACAGGTCAACA+TGG | - | chr8_3:62086622-62086641 | Msa1300500:intron | 45.0% | |
| TACATTCCTAAACCACCAGG+AGG | + | chr8_3:62086715-62086734 | None:intergenic | 45.0% | |
| CCATACATTCCTAAACCACC+AGG | + | chr8_3:62086718-62086737 | None:intergenic | 45.0% | |
| CCTGGTGGTTTAGGAATGTA+TGG | - | chr8_3:62086715-62086734 | Msa1300500:intron | 45.0% | |
| CTCATATGGCATCTGCAGTT+GGG | - | chr8_3:62086773-62086792 | Msa1300500:intron | 45.0% | |
| ! | GGATGATGATGAGGATGATG+GGG | + | chr8_3:62086814-62086833 | None:intergenic | 45.0% |
| ! | GTGGATGATGATGAGGATGA+TGG | + | chr8_3:62086816-62086835 | None:intergenic | 45.0% |
| ! | GCAAGAGGTACAACATAAGG+TGG | + | chr8_3:62086835-62086854 | None:intergenic | 45.0% |
| TGTACCTCTTGCTTACCCTA+TGG | - | chr8_3:62086843-62086862 | Msa1300500:CDS | 45.0% | |
| TGTCATTGGTGCATTGTTGG+AGG | + | chr8_3:62086871-62086890 | None:intergenic | 45.0% | |
| !! | TTGGATTTTGGAGGCTCATC+AGG | - | chr8_3:62086943-62086962 | Msa1300500:CDS | 45.0% |
| !! | TGGATTTTGGAGGCTCATCA+GGG | - | chr8_3:62086944-62086963 | Msa1300500:CDS | 45.0% |
| CACCGATGAGATTCTCACAT+TGG | - | chr8_3:62087021-62087040 | Msa1300500:CDS | 45.0% | |
| ! | TGAGATTCTCACATTGGCTG+CGG | - | chr8_3:62087027-62087046 | Msa1300500:CDS | 45.0% |
| ! | CCAACATTGGTTGGTTCAGT+TGG | + | chr8_3:62087095-62087114 | None:intergenic | 45.0% |
| CCAACTGAACCAACCAATGT+TGG | - | chr8_3:62087092-62087111 | Msa1300500:CDS | 45.0% | |
| AAGAGGAGTTGAGCCAACAT+TGG | + | chr8_3:62087108-62087127 | None:intergenic | 45.0% | |
| TGTCATCAAGTGGAGCCATT+TGG | - | chr8_3:62085695-62085714 | Msa1300500:three_prime_UTR | 45.0% | |
| !!! | GGAAGTGGGTTTTCTGGTTT+AGG | - | chr8_3:62086000-62086019 | Msa1300500:three_prime_UTR | 45.0% |
| ACCCACCATAGTAGTGGTAA+AGG | - | chr8_3:62086033-62086052 | Msa1300500:three_prime_UTR | 45.0% | |
| CACCTTTACCACTACTATGG+TGG | + | chr8_3:62086038-62086057 | None:intergenic | 45.0% | |
| CACCATAGTAGTGGTAAAGG+TGG | - | chr8_3:62086036-62086055 | Msa1300500:three_prime_UTR | 45.0% | |
| !! | GTGGTAAAGGTGGATTGTCA+AGG | - | chr8_3:62086046-62086065 | Msa1300500:three_prime_UTR | 45.0% |
| CTATGCTCTTCTTCTGTCCA+TGG | + | chr8_3:62086111-62086130 | None:intergenic | 45.0% | |
| ! | CATGGACAGAAGAAGAGCAT+AGG | - | chr8_3:62086109-62086128 | Msa1300500:CDS | 45.0% |
| !! | GCATGACTTGCTACTTGTGT+TGG | + | chr8_3:62086496-62086515 | None:intergenic | 45.0% |
| GCACCAATAACAGGTCAACA+TGG | - | chr8_3:62086622-62086641 | Msa1300500:intron | 45.0% | |
| TACATTCCTAAACCACCAGG+AGG | + | chr8_3:62086715-62086734 | None:intergenic | 45.0% | |
| CCATACATTCCTAAACCACC+AGG | + | chr8_3:62086718-62086737 | None:intergenic | 45.0% | |
| CCTGGTGGTTTAGGAATGTA+TGG | - | chr8_3:62086715-62086734 | Msa1300500:intron | 45.0% | |
| CTCATATGGCATCTGCAGTT+GGG | - | chr8_3:62086773-62086792 | Msa1300500:intron | 45.0% | |
| ! | GGATGATGATGAGGATGATG+GGG | + | chr8_3:62086814-62086833 | None:intergenic | 45.0% |
| ! | GTGGATGATGATGAGGATGA+TGG | + | chr8_3:62086816-62086835 | None:intergenic | 45.0% |
| ! | GCAAGAGGTACAACATAAGG+TGG | + | chr8_3:62086835-62086854 | None:intergenic | 45.0% |
| TGTACCTCTTGCTTACCCTA+TGG | - | chr8_3:62086843-62086862 | Msa1300500:CDS | 45.0% | |
| TGTCATTGGTGCATTGTTGG+AGG | + | chr8_3:62086871-62086890 | None:intergenic | 45.0% | |
| !! | TTGGATTTTGGAGGCTCATC+AGG | - | chr8_3:62086943-62086962 | Msa1300500:CDS | 45.0% |
| !! | TGGATTTTGGAGGCTCATCA+GGG | - | chr8_3:62086944-62086963 | Msa1300500:CDS | 45.0% |
| CACCGATGAGATTCTCACAT+TGG | - | chr8_3:62087021-62087040 | Msa1300500:CDS | 45.0% | |
| ! | TGAGATTCTCACATTGGCTG+CGG | - | chr8_3:62087027-62087046 | Msa1300500:CDS | 45.0% |
| ! | CCAACATTGGTTGGTTCAGT+TGG | + | chr8_3:62087095-62087114 | None:intergenic | 45.0% |
| CCAACTGAACCAACCAATGT+TGG | - | chr8_3:62087092-62087111 | Msa1300500:CDS | 45.0% | |
| AAGAGGAGTTGAGCCAACAT+TGG | + | chr8_3:62087108-62087127 | None:intergenic | 45.0% | |
| ! | ATAGAGGGTGCGCAGGATAA+GGG | + | chr8_3:62085533-62085552 | None:intergenic | 50.0% |
| ! | TATAGAGGGTGCGCAGGATA+AGG | + | chr8_3:62085534-62085553 | None:intergenic | 50.0% |
| GGCCCTTGGTTGGATTTCTT+TGG | + | chr8_3:62085671-62085690 | None:intergenic | 50.0% | |
| ATGACATGTTGGCCCTTGGT+TGG | + | chr8_3:62085681-62085700 | None:intergenic | 50.0% | |
| ! | CTTGATGACATGTTGGCCCT+TGG | + | chr8_3:62085685-62085704 | None:intergenic | 50.0% |
| AGGGCCAACATGTCATCAAG+TGG | - | chr8_3:62085685-62085704 | Msa1300500:three_prime_UTR | 50.0% | |
| ! | GGCTCCACTTGATGACATGT+TGG | + | chr8_3:62085692-62085711 | None:intergenic | 50.0% |
| GACTCTACCCACCATAGTAG+TGG | - | chr8_3:62086027-62086046 | Msa1300500:three_prime_UTR | 50.0% | |
| AAACCACCAGGAGGATGATG+AGG | + | chr8_3:62086706-62086725 | None:intergenic | 50.0% | |
| CATCATCCTCCTGGTGGTTT+AGG | - | chr8_3:62086706-62086725 | Msa1300500:intron | 50.0% | |
| ! | GGAATGTATGGAGCACCAGT+TGG | - | chr8_3:62086727-62086746 | Msa1300500:intron | 50.0% |
| GCAACAACAGGATGTCCAAC+TGG | + | chr8_3:62086745-62086764 | None:intergenic | 50.0% | |
| TGTTGCTCCTCCTGCTCATA+TGG | - | chr8_3:62086759-62086778 | Msa1300500:intron | 50.0% | |
| ACTGCAGATGCCATATGAGC+AGG | + | chr8_3:62086772-62086791 | None:intergenic | 50.0% | |
| GCTCATATGGCATCTGCAGT+TGG | - | chr8_3:62086772-62086791 | Msa1300500:intron | 50.0% | |
| !! | GGATGATGGGGAAGCATAAC+AGG | + | chr8_3:62086802-62086821 | None:intergenic | 50.0% |
| !! | GCATTGTTGGAGGTGCCATA+GGG | + | chr8_3:62086861-62086880 | None:intergenic | 50.0% |
| !! | TGCATTGTTGGAGGTGCCAT+AGG | + | chr8_3:62086862-62086881 | None:intergenic | 50.0% |
| !! | TTTTGGAGGCTCATCAGGGT+CGG | - | chr8_3:62086948-62086967 | Msa1300500:CDS | 50.0% |
| GACTCAGAGTGTAGTGACAG+AGG | - | chr8_3:62086983-62087002 | Msa1300500:CDS | 50.0% | |
| GGAGTTGAGCCAACATTGGT+TGG | + | chr8_3:62087104-62087123 | None:intergenic | 50.0% | |
| CCAAGACCCACCACCTAATA+TGG | + | chr8_3:62087313-62087332 | None:intergenic | 50.0% | |
| !! | CCATATTAGGTGGTGGGTCT+TGG | - | chr8_3:62087310-62087329 | Msa1300500:five_prime_UTR | 50.0% |
| ! | ATAGAGGGTGCGCAGGATAA+GGG | + | chr8_3:62085533-62085552 | None:intergenic | 50.0% |
| ! | TATAGAGGGTGCGCAGGATA+AGG | + | chr8_3:62085534-62085553 | None:intergenic | 50.0% |
| GGCCCTTGGTTGGATTTCTT+TGG | + | chr8_3:62085671-62085690 | None:intergenic | 50.0% | |
| ATGACATGTTGGCCCTTGGT+TGG | + | chr8_3:62085681-62085700 | None:intergenic | 50.0% | |
| ! | CTTGATGACATGTTGGCCCT+TGG | + | chr8_3:62085685-62085704 | None:intergenic | 50.0% |
| AGGGCCAACATGTCATCAAG+TGG | - | chr8_3:62085685-62085704 | Msa1300500:three_prime_UTR | 50.0% | |
| ! | GGCTCCACTTGATGACATGT+TGG | + | chr8_3:62085692-62085711 | None:intergenic | 50.0% |
| GACTCTACCCACCATAGTAG+TGG | - | chr8_3:62086027-62086046 | Msa1300500:three_prime_UTR | 50.0% | |
| AAACCACCAGGAGGATGATG+AGG | + | chr8_3:62086706-62086725 | None:intergenic | 50.0% | |
| CATCATCCTCCTGGTGGTTT+AGG | - | chr8_3:62086706-62086725 | Msa1300500:intron | 50.0% | |
| ! | GGAATGTATGGAGCACCAGT+TGG | - | chr8_3:62086727-62086746 | Msa1300500:intron | 50.0% |
| GCAACAACAGGATGTCCAAC+TGG | + | chr8_3:62086745-62086764 | None:intergenic | 50.0% | |
| TGTTGCTCCTCCTGCTCATA+TGG | - | chr8_3:62086759-62086778 | Msa1300500:intron | 50.0% | |
| ACTGCAGATGCCATATGAGC+AGG | + | chr8_3:62086772-62086791 | None:intergenic | 50.0% | |
| GCTCATATGGCATCTGCAGT+TGG | - | chr8_3:62086772-62086791 | Msa1300500:intron | 50.0% | |
| !! | GGATGATGGGGAAGCATAAC+AGG | + | chr8_3:62086802-62086821 | None:intergenic | 50.0% |
| !! | GCATTGTTGGAGGTGCCATA+GGG | + | chr8_3:62086861-62086880 | None:intergenic | 50.0% |
| !! | TGCATTGTTGGAGGTGCCAT+AGG | + | chr8_3:62086862-62086881 | None:intergenic | 50.0% |
| !! | TTTTGGAGGCTCATCAGGGT+CGG | - | chr8_3:62086948-62086967 | Msa1300500:CDS | 50.0% |
| GACTCAGAGTGTAGTGACAG+AGG | - | chr8_3:62086983-62087002 | Msa1300500:CDS | 50.0% | |
| GGAGTTGAGCCAACATTGGT+TGG | + | chr8_3:62087104-62087123 | None:intergenic | 50.0% | |
| CCAAGACCCACCACCTAATA+TGG | + | chr8_3:62087313-62087332 | None:intergenic | 50.0% | |
| !! | CCATATTAGGTGGTGGGTCT+TGG | - | chr8_3:62087310-62087329 | Msa1300500:five_prime_UTR | 50.0% |
| ! | TAGAGGGTGCGCAGGATAAG+GGG | + | chr8_3:62085532-62085551 | None:intergenic | 55.0% |
| ! | TGGTAGTATAGAGGGTGCGC+AGG | + | chr8_3:62085540-62085559 | None:intergenic | 55.0% |
| GTTCAGCCTCATCATCCTCC+TGG | - | chr8_3:62086697-62086716 | Msa1300500:intron | 55.0% | |
| TGAGCAGGAGGAGCAACAAC+AGG | + | chr8_3:62086757-62086776 | None:intergenic | 55.0% | |
| GCAGATGCCATATGAGCAGG+AGG | + | chr8_3:62086769-62086788 | None:intergenic | 55.0% | |
| ! | GGTGCCATAGGGTAAGCAAG+AGG | + | chr8_3:62086850-62086869 | None:intergenic | 55.0% |
| TTTGGAGGCTCATCAGGGTC+GGG | - | chr8_3:62086949-62086968 | Msa1300500:CDS | 55.0% | |
| ! | TAGAGGGTGCGCAGGATAAG+GGG | + | chr8_3:62085532-62085551 | None:intergenic | 55.0% |
| ! | TGGTAGTATAGAGGGTGCGC+AGG | + | chr8_3:62085540-62085559 | None:intergenic | 55.0% |
| GTTCAGCCTCATCATCCTCC+TGG | - | chr8_3:62086697-62086716 | Msa1300500:intron | 55.0% | |
| TGAGCAGGAGGAGCAACAAC+AGG | + | chr8_3:62086757-62086776 | None:intergenic | 55.0% | |
| GCAGATGCCATATGAGCAGG+AGG | + | chr8_3:62086769-62086788 | None:intergenic | 55.0% | |
| ! | GGTGCCATAGGGTAAGCAAG+AGG | + | chr8_3:62086850-62086869 | None:intergenic | 55.0% |
| TTTGGAGGCTCATCAGGGTC+GGG | - | chr8_3:62086949-62086968 | Msa1300500:CDS | 55.0% | |
| CAGCCTCATCATCCTCCTGG+TGG | - | chr8_3:62086700-62086719 | Msa1300500:intron | 60.0% | |
| TTGGAGGCTCATCAGGGTCG+GGG | - | chr8_3:62086950-62086969 | Msa1300500:CDS | 60.0% | |
| CAGCCTCATCATCCTCCTGG+TGG | - | chr8_3:62086700-62086719 | Msa1300500:intron | 60.0% | |
| TTGGAGGCTCATCAGGGTCG+GGG | - | chr8_3:62086950-62086969 | Msa1300500:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 62085521 | 62087447 | 62085521 | ID=Msa1300500;Name=Msa1300500 |
| chr8_3 | mRNA | 62085521 | 62087447 | 62085521 | ID=Msa1300500-mRNA-1;Parent=Msa1300500;Name=Msa1300500-mRNA-1;_AED=0.01;_eAED=0.01;_QI=173|1|1|1|1|1|2|559|303 |
| chr8_3 | exon | 62085521 | 62086554 | 62085521 | ID=Msa1300500-mRNA-1:exon:18424;Parent=Msa1300500-mRNA-1 |
| chr8_3 | exon | 62086838 | 62087447 | 62086838 | ID=Msa1300500-mRNA-1:exon:18423;Parent=Msa1300500-mRNA-1 |
| chr8_3 | five_prime_UTR | 62087275 | 62087447 | 62087275 | ID=Msa1300500-mRNA-1:five_prime_utr;Parent=Msa1300500-mRNA-1 |
| chr8_3 | CDS | 62086838 | 62087274 | 62086838 | ID=Msa1300500-mRNA-1:cds;Parent=Msa1300500-mRNA-1 |
| chr8_3 | CDS | 62086080 | 62086554 | 62086080 | ID=Msa1300500-mRNA-1:cds;Parent=Msa1300500-mRNA-1 |
| chr8_3 | three_prime_UTR | 62085521 | 62086079 | 62085521 | ID=Msa1300500-mRNA-1:three_prime_utr;Parent=Msa1300500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
