Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545590 | XP_013455825.1 | 97.911 | 383 | 8 | 0 | 1 | 383 | 1 | 383 | 0.0 | 769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545590 | sp|Q9ZQG9|E1314_ARATH | 62.185 | 357 | 134 | 1 | 23 | 378 | 23 | 379 | 2.13e-172 | 489 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545590 | A0A072UKG4 | 97.911 | 383 | 8 | 0 | 1 | 383 | 1 | 383 | 0.0 | 769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016830 | Msa0545590 | 0.802600 | 5.193727e-49 | -8.615850e-47 |
| Msa0038310 | Msa0545590 | 0.822652 | 2.112378e-53 | -8.615850e-47 |
| Msa0039200 | Msa0545590 | 0.805957 | 1.038545e-49 | -8.615850e-47 |
| Msa0050360 | Msa0545590 | 0.804164 | 2.463440e-49 | -8.615850e-47 |
| Msa0050400 | Msa0545590 | 0.810375 | 1.189099e-50 | -8.615850e-47 |
| Msa0056130 | Msa0545590 | 0.810844 | 9.417462e-51 | -8.615850e-47 |
| Msa0056160 | Msa0545590 | 0.824854 | 6.440894e-54 | -8.615850e-47 |
| Msa0057740 | Msa0545590 | 0.813789 | 2.142316e-51 | -8.615850e-47 |
| Msa0065190 | Msa0545590 | 0.833516 | 5.099928e-56 | -8.615850e-47 |
| Msa0067820 | Msa0545590 | 0.803938 | 2.744930e-49 | -8.615850e-47 |
| Msa0086820 | Msa0545590 | 0.801064 | 1.073868e-48 | -8.615850e-47 |
| Msa0087880 | Msa0545590 | 0.805541 | 1.270153e-49 | -8.615850e-47 |
| Msa0092750 | Msa0545590 | 0.835241 | 1.881883e-56 | -8.615850e-47 |
| Msa0094240 | Msa0545590 | 0.809291 | 2.034756e-50 | -8.615850e-47 |
| Msa0094670 | Msa0545590 | 0.805945 | 1.044854e-49 | -8.615850e-47 |
| Msa0103060 | Msa0545590 | 0.817797 | 2.737309e-52 | -8.615850e-47 |
| Msa0103780 | Msa0545590 | 0.800233 | 1.586676e-48 | -8.615850e-47 |
| Msa0114960 | Msa0545590 | 0.809446 | 1.884805e-50 | -8.615850e-47 |
| Msa0124070 | Msa0545590 | 0.800593 | 1.340220e-48 | -8.615850e-47 |
| Msa0132620 | Msa0545590 | 0.811954 | 5.405298e-51 | -8.615850e-47 |
| Msa0133670 | Msa0545590 | 0.801896 | 7.252070e-49 | -8.615850e-47 |
| Msa0133880 | Msa0545590 | 0.800532 | 1.379337e-48 | -8.615850e-47 |
| Msa0134550 | Msa0545590 | 0.800754 | 1.242308e-48 | -8.615850e-47 |
| Msa0141670 | Msa0545590 | 0.816075 | 6.665080e-52 | -8.615850e-47 |
| Msa0184120 | Msa0545590 | 0.805446 | 1.329651e-49 | -8.615850e-47 |
| Msa0190000 | Msa0545590 | 0.830900 | 2.262726e-55 | -8.615850e-47 |
| Msa0197600 | Msa0545590 | 0.811385 | 7.188479e-51 | -8.615850e-47 |
| Msa0202060 | Msa0545590 | -0.800956 | 1.129743e-48 | -8.615850e-47 |
| Msa0202150 | Msa0545590 | 0.818324 | 2.080345e-52 | -8.615850e-47 |
| Msa0212960 | Msa0545590 | 0.823086 | 1.673840e-53 | -8.615850e-47 |
| Msa0222510 | Msa0545590 | 0.842572 | 2.382314e-58 | -8.615850e-47 |
| Msa0369750 | Msa0545590 | 0.807449 | 5.027497e-50 | -8.615850e-47 |
| Msa0371610 | Msa0545590 | 0.823905 | 1.077081e-53 | -8.615850e-47 |
| Msa0371870 | Msa0545590 | 0.814300 | 1.652499e-51 | -8.615850e-47 |
| Msa0372550 | Msa0545590 | 0.827154 | 1.829996e-54 | -8.615850e-47 |
| Msa0375430 | Msa0545590 | 0.807050 | 6.108808e-50 | -8.615850e-47 |
| Msa0379900 | Msa0545590 | 0.809485 | 1.848539e-50 | -8.615850e-47 |
| Msa0380430 | Msa0545590 | 0.809541 | 1.798231e-50 | -8.615850e-47 |
| Msa0404440 | Msa0545590 | 0.802015 | 6.856174e-49 | -8.615850e-47 |
| Msa0405040 | Msa0545590 | 0.800209 | 1.604432e-48 | -8.615850e-47 |
| Msa0411560 | Msa0545590 | 0.800291 | 1.543896e-48 | -8.615850e-47 |
| Msa0413740 | Msa0545590 | 0.806586 | 7.656391e-50 | -8.615850e-47 |
| Msa0414990 | Msa0545590 | 0.805452 | 1.326097e-49 | -8.615850e-47 |
| Msa0420070 | Msa0545590 | 0.823234 | 1.545977e-53 | -8.615850e-47 |
| Msa0423600 | Msa0545590 | 0.805899 | 1.068353e-49 | -8.615850e-47 |
| Msa0440090 | Msa0545590 | 0.806917 | 6.517838e-50 | -8.615850e-47 |
| Msa0452010 | Msa0545590 | 0.801730 | 7.843799e-49 | -8.615850e-47 |
| Msa0453310 | Msa0545590 | 0.813692 | 2.250874e-51 | -8.615850e-47 |
| Msa0455610 | Msa0545590 | 0.802555 | 5.308261e-49 | -8.615850e-47 |
| Msa0458110 | Msa0545590 | 0.802596 | 5.203584e-49 | -8.615850e-47 |
| Msa0463140 | Msa0545590 | 0.822508 | 2.281165e-53 | -8.615850e-47 |
| Msa0463580 | Msa0545590 | 0.810722 | 1.000586e-50 | -8.615850e-47 |
| Msa0464500 | Msa0545590 | 0.816537 | 5.253590e-52 | -8.615850e-47 |
| Msa0466340 | Msa0545590 | 0.816743 | 4.724867e-52 | -8.615850e-47 |
| Msa0470650 | Msa0545590 | 0.805138 | 1.542368e-49 | -8.615850e-47 |
| Msa0476820 | Msa0545590 | 0.813154 | 2.954420e-51 | -8.615850e-47 |
| Msa0240290 | Msa0545590 | 0.812477 | 4.156948e-51 | -8.615850e-47 |
| Msa0253240 | Msa0545590 | 0.824093 | 9.729832e-54 | -8.615850e-47 |
| Msa0261440 | Msa0545590 | 0.804043 | 2.611062e-49 | -8.615850e-47 |
| Msa0272420 | Msa0545590 | 0.830800 | 2.394884e-55 | -8.615850e-47 |
| Msa0278080 | Msa0545590 | 0.807049 | 6.110385e-50 | -8.615850e-47 |
| Msa0282860 | Msa0545590 | 0.801579 | 8.422380e-49 | -8.615850e-47 |
| Msa0301800 | Msa0545590 | 0.831566 | 1.552685e-55 | -8.615850e-47 |
| Msa0307750 | Msa0545590 | 0.802449 | 5.579815e-49 | -8.615850e-47 |
| Msa0311330 | Msa0545590 | 0.803717 | 3.051160e-49 | -8.615850e-47 |
| Msa0312570 | Msa0545590 | 0.831663 | 1.469631e-55 | -8.615850e-47 |
| Msa0317630 | Msa0545590 | 0.802082 | 6.642485e-49 | -8.615850e-47 |
| Msa0347600 | Msa0545590 | 0.809058 | 2.282111e-50 | -8.615850e-47 |
| Msa0349450 | Msa0545590 | 0.838290 | 3.138972e-57 | -8.615850e-47 |
| Msa0361500 | Msa0545590 | 0.810698 | 1.012670e-50 | -8.615850e-47 |
| Msa0505390 | Msa0545590 | 0.805822 | 1.108794e-49 | -8.615850e-47 |
| Msa0515680 | Msa0545590 | 0.800906 | 1.156846e-48 | -8.615850e-47 |
| Msa0515830 | Msa0545590 | 0.806225 | 9.121660e-50 | -8.615850e-47 |
| Msa0528170 | Msa0545590 | 0.802438 | 5.610019e-49 | -8.615850e-47 |
| Msa0538140 | Msa0545590 | 0.803277 | 3.763808e-49 | -8.615850e-47 |
| Msa0539320 | Msa0545590 | 0.821391 | 4.138848e-53 | -8.615850e-47 |
| Msa0543310 | Msa0545590 | 0.817745 | 2.812552e-52 | -8.615850e-47 |
| Msa0545590 | Msa0547810 | 0.813653 | 2.295474e-51 | -8.615850e-47 |
| Msa0545590 | Msa0553520 | 0.803285 | 3.749106e-49 | -8.615850e-47 |
| Msa0545590 | Msa0565930 | 0.807604 | 4.660999e-50 | -8.615850e-47 |
| Msa0545590 | Msa0574450 | 0.806560 | 7.753976e-50 | -8.615850e-47 |
| Msa0545590 | Msa0576150 | 0.822476 | 2.320854e-53 | -8.615850e-47 |
| Msa0545590 | Msa0577870 | 0.848540 | 5.743113e-60 | -8.615850e-47 |
| Msa0545590 | Msa0577910 | 0.817224 | 3.684877e-52 | -8.615850e-47 |
| Msa0545590 | Msa0595240 | 0.810595 | 1.065959e-50 | -8.615850e-47 |
| Msa0545590 | Msa0595780 | 0.821601 | 3.702485e-53 | -8.615850e-47 |
| Msa0545590 | Msa0599250 | 0.809808 | 1.575970e-50 | -8.615850e-47 |
| Msa0545590 | Msa0606680 | 0.839259 | 1.763906e-57 | -8.615850e-47 |
| Msa0545590 | Msa0619060 | 0.813386 | 2.627721e-51 | -8.615850e-47 |
| Msa0545590 | Msa0631340 | 0.805884 | 1.076260e-49 | -8.615850e-47 |
| Msa0545590 | Msa0635130 | 0.827925 | 1.195176e-54 | -8.615850e-47 |
| Msa0545590 | Msa0635350 | 0.830933 | 2.221108e-55 | -8.615850e-47 |
| Msa0545590 | Msa0639880 | 0.806941 | 6.441842e-50 | -8.615850e-47 |
| Msa0545590 | Msa0656040 | 0.840787 | 7.044604e-58 | -8.615850e-47 |
| Msa0545590 | Msa0659130 | 0.812346 | 4.440449e-51 | -8.615850e-47 |
| Msa0545590 | Msa0660410 | 0.804468 | 2.129581e-49 | -8.615850e-47 |
| Msa0545590 | Msa0672350 | 0.834284 | 3.275948e-56 | -8.615850e-47 |
| Msa0545590 | Msa0677590 | 0.808769 | 2.631686e-50 | -8.615850e-47 |
| Msa0545590 | Msa0680300 | 0.842194 | 3.000826e-58 | -8.615850e-47 |
| Msa0545590 | Msa0690720 | 0.827140 | 1.843859e-54 | -8.615850e-47 |
| Msa0545590 | Msa0698860 | 0.806113 | 9.630735e-50 | -8.615850e-47 |
| Msa0545590 | Msa0698880 | 0.815235 | 1.025716e-51 | -8.615850e-47 |
| Msa0545590 | Msa0704990 | 0.801291 | 9.650439e-49 | -8.615850e-47 |
| Msa0545590 | Msa0705030 | 0.804614 | 1.985142e-49 | -8.615850e-47 |
| Msa0545590 | Msa0705610 | 0.809250 | 2.076490e-50 | -8.615850e-47 |
| Msa0545590 | Msa0708120 | 0.816985 | 4.168375e-52 | -8.615850e-47 |
| Msa0545590 | Msa0714020 | 0.806265 | 8.946220e-50 | -8.615850e-47 |
| Msa0545590 | Msa0714160 | 0.809042 | 2.301068e-50 | -8.615850e-47 |
| Msa0545590 | Msa0716670 | 0.823185 | 1.587010e-53 | -8.615850e-47 |
| Msa0545590 | Msa0719340 | 0.835497 | 1.621025e-56 | -8.615850e-47 |
| Msa0545590 | Msa0720850 | 0.810613 | 1.056372e-50 | -8.615850e-47 |
| Msa0545590 | Msa0726000 | 0.807009 | 6.230875e-50 | -8.615850e-47 |
| Msa0545590 | Msa0734430 | 0.821670 | 3.569584e-53 | -8.615850e-47 |
| Msa0545590 | Msa0739570 | 0.800154 | 1.646566e-48 | -8.615850e-47 |
| Msa0545590 | Msa0744450 | 0.800802 | 1.214674e-48 | -8.615850e-47 |
| Msa0545590 | Msa0747500 | -0.800220 | 1.596624e-48 | -8.615850e-47 |
| Msa0545590 | Msa0747900 | 0.823959 | 1.045689e-53 | -8.615850e-47 |
| Msa0545590 | Msa0749160 | 0.819872 | 9.245725e-53 | -8.615850e-47 |
| Msa0545590 | Msa0752830 | 0.843215 | 1.607133e-58 | -8.615850e-47 |
| Msa0545590 | Msa0758330 | 0.816226 | 6.167268e-52 | -8.615850e-47 |
| Msa0545590 | Msa0772150 | 0.819629 | 1.050255e-52 | -8.615850e-47 |
| Msa0545590 | Msa0772400 | 0.806618 | 7.538670e-50 | -8.615850e-47 |
| Msa0545590 | Msa0797810 | 0.800072 | 1.710916e-48 | -8.615850e-47 |
| Msa0545590 | Msa0799710 | 0.814200 | 1.739105e-51 | -8.615850e-47 |
| Msa0545590 | Msa0801390 | 0.804357 | 2.245692e-49 | -8.615850e-47 |
| Msa0545590 | Msa0803930 | 0.803518 | 3.355797e-49 | -8.615850e-47 |
| Msa0545590 | Msa0804930 | 0.819803 | 9.587270e-53 | -8.615850e-47 |
| Msa0545590 | Msa0829570 | 0.804518 | 2.078756e-49 | -8.615850e-47 |
| Msa0545590 | Msa0835510 | 0.812457 | 4.199878e-51 | -8.615850e-47 |
| Msa0545590 | Msa0837590 | 0.826589 | 2.496652e-54 | -8.615850e-47 |
| Msa0545590 | Msa0838220 | 0.821726 | 3.463647e-53 | -8.615850e-47 |
| Msa0545590 | Msa0839730 | 0.807812 | 4.209046e-50 | -8.615850e-47 |
| Msa0545590 | Msa0841980 | 0.817921 | 2.566485e-52 | -8.615850e-47 |
| Msa0545590 | Msa0851870 | 0.810184 | 1.307526e-50 | -8.615850e-47 |
| Msa0545590 | Msa0862240 | 0.811465 | 6.908276e-51 | -8.615850e-47 |
| Msa0545590 | Msa0880230 | 0.803460 | 3.448960e-49 | -8.615850e-47 |
| Msa0545590 | Msa0906150 | 0.829150 | 6.045812e-55 | -8.615850e-47 |
| Msa0545590 | Msa0910650 | 0.825620 | 4.243678e-54 | -8.615850e-47 |
| Msa0545590 | Msa0975280 | 0.810053 | 1.395676e-50 | -8.615850e-47 |
| Msa0545590 | Msa1028210 | 0.803082 | 4.130123e-49 | -8.615850e-47 |
| Msa0545590 | Msa1033160 | 0.810603 | 1.062085e-50 | -8.615850e-47 |
| Msa0545590 | Msa1036350 | 0.801596 | 8.355257e-49 | -8.615850e-47 |
| Msa0545590 | Msa1044040 | 0.823097 | 1.663421e-53 | -8.615850e-47 |
| Msa0545590 | Msa1055490 | 0.819408 | 1.180136e-52 | -8.615850e-47 |
| Msa0545590 | Msa1056520 | 0.811247 | 7.702129e-51 | -8.615850e-47 |
| Msa0545590 | Msa1064920 | 0.822906 | 1.843801e-53 | -8.615850e-47 |
| Msa0545590 | Msa1067910 | 0.825972 | 3.502167e-54 | -8.615850e-47 |
| Msa0545590 | Msa1074630 | 0.812275 | 4.601305e-51 | -8.615850e-47 |
| Msa0545590 | Msa1079610 | 0.819710 | 1.006900e-52 | -8.615850e-47 |
| Msa0545590 | Msa1085370 | 0.803914 | 2.776252e-49 | -8.615850e-47 |
| Msa0545590 | Msa1106320 | 0.819497 | 1.126180e-52 | -8.615850e-47 |
| Msa0545590 | Msa1110030 | 0.836674 | 8.146839e-57 | -8.615850e-47 |
| Msa0545590 | Msa1113210 | 0.817666 | 2.929765e-52 | -8.615850e-47 |
| Msa0545590 | Msa1122510 | 0.800727 | 1.258222e-48 | -8.615850e-47 |
| Msa0545590 | Msa1124440 | 0.815466 | 9.112042e-52 | -8.615850e-47 |
| Msa0545590 | Msa1130070 | 0.801500 | 8.743797e-49 | -8.615850e-47 |
| Msa0545590 | Msa1140940 | 0.819787 | 9.665536e-53 | -8.615850e-47 |
| Msa0545590 | Msa1144420 | 0.809848 | 1.544668e-50 | -8.615850e-47 |
| Msa0545590 | Msa1145070 | 0.814444 | 1.535591e-51 | -8.615850e-47 |
| Msa0545590 | Msa1161160 | 0.813145 | 2.968607e-51 | -8.615850e-47 |
| Msa0545590 | Msa1168130 | 0.807369 | 5.227665e-50 | -8.615850e-47 |
| Msa0545590 | Msa1182960 | 0.809136 | 2.196021e-50 | -8.615850e-47 |
| Msa0545590 | Msa1186210 | 0.801160 | 1.026587e-48 | -8.615850e-47 |
| Msa0545590 | Msa1195860 | 0.805951 | 1.041870e-49 | -8.615850e-47 |
| Msa0545590 | Msa1196990 | 0.800288 | 1.546333e-48 | -8.615850e-47 |
| Msa0545590 | Msa1198420 | 0.812700 | 3.715277e-51 | -8.615850e-47 |
| Msa0545590 | Msa1199690 | 0.834434 | 3.003889e-56 | -8.615850e-47 |
| Msa0545590 | Msa1203860 | 0.807326 | 5.338745e-50 | -8.615850e-47 |
| Msa0545590 | Msa1211370 | 0.823184 | 1.588283e-53 | -8.615850e-47 |
| Msa0545590 | Msa1213550 | 0.833669 | 4.670915e-56 | -8.615850e-47 |
| Msa0545590 | Msa1226360 | 0.801199 | 1.007861e-48 | -8.615850e-47 |
| Msa0545590 | Msa1226600 | 0.804378 | 2.223639e-49 | -8.615850e-47 |
| Msa0545590 | Msa1246420 | 0.802083 | 6.639188e-49 | -8.615850e-47 |
| Msa0545590 | Msa1280020 | 0.829009 | 6.540250e-55 | -8.615850e-47 |
| Msa0545590 | Msa1292620 | 0.806378 | 8.468788e-50 | -8.615850e-47 |
| Msa0545590 | Msa1306540 | 0.810189 | 1.304099e-50 | -8.615850e-47 |
| Msa0545590 | Msa1306590 | 0.800682 | 1.285432e-48 | -8.615850e-47 |
| Msa0545590 | Msa1309910 | 0.820313 | 7.326922e-53 | -8.615850e-47 |
| Msa0545590 | Msa1329820 | 0.806611 | 7.561524e-50 | -8.615850e-47 |
| Msa0545590 | Msa1331400 | 0.833922 | 4.036750e-56 | -8.615850e-47 |
| Msa0545590 | Msa1341790 | 0.802261 | 6.102526e-49 | -8.615850e-47 |
| Msa0545590 | Msa1349360 | 0.810874 | 9.275669e-51 | -8.615850e-47 |
| Msa0545590 | Msa1351370 | 0.801522 | 8.655200e-49 | -8.615850e-47 |
| Msa0545590 | Msa1352820 | 0.801713 | 7.909352e-49 | -8.615850e-47 |
| Msa0545590 | Msa1355260 | 0.801075 | 1.068323e-48 | -8.615850e-47 |
| Msa0545590 | Msa1364420 | 0.813082 | 3.063950e-51 | -8.615850e-47 |
| Msa0545590 | Msa1373910 | 0.800529 | 1.380863e-48 | -8.615850e-47 |
| Msa0545590 | Msa1375330 | 0.807129 | 5.876877e-50 | -8.615850e-47 |
| Msa0545590 | Msa1375400 | 0.808229 | 3.431911e-50 | -8.615850e-47 |
| Msa0545590 | Msa1379070 | 0.807760 | 4.318573e-50 | -8.615850e-47 |
| Msa0545590 | Msa1379090 | 0.810064 | 1.387869e-50 | -8.615850e-47 |
| Msa0545590 | Msa1384980 | 0.812024 | 5.220198e-51 | -8.615850e-47 |
| Msa0545590 | Msa1385940 | 0.803053 | 4.188882e-49 | -8.615850e-47 |
| Msa0545590 | Msa1386020 | 0.831183 | 1.928514e-55 | -8.615850e-47 |
| Msa0545590 | Msa1388230 | 0.810685 | 1.019145e-50 | -8.615850e-47 |
| Msa0545590 | Msa1395580 | 0.826246 | 3.014715e-54 | -8.615850e-47 |
| Msa0545590 | Msa1413880 | 0.804769 | 1.842969e-49 | -8.615850e-47 |
| Msa0545590 | Msa1435990 | 0.833522 | 5.081169e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545590 | MtrunA17_Chr4g0026321 | 97.911 | 383 | 8 | 0 | 1 | 383 | 1 | 383 | 0.0 | 769 |
| Msa0545590 | MtrunA17_Chr2g0321511 | 64.858 | 387 | 128 | 2 | 1 | 381 | 1 | 385 | 0.0 | 513 |
| Msa0545590 | MtrunA17_Chr1g0189111 | 59.375 | 320 | 129 | 1 | 28 | 347 | 30 | 348 | 5.69e-141 | 407 |
| Msa0545590 | MtrunA17_Chr4g0043851 | 51.613 | 341 | 163 | 1 | 10 | 350 | 15 | 353 | 7.42e-129 | 376 |
| Msa0545590 | MtrunA17_Chr2g0285901 | 51.863 | 322 | 154 | 1 | 26 | 347 | 21 | 341 | 1.78e-123 | 362 |
| Msa0545590 | MtrunA17_Chr4g0064021 | 47.678 | 323 | 168 | 1 | 28 | 349 | 25 | 347 | 1.40e-109 | 326 |
| Msa0545590 | MtrunA17_Chr4g0003281 | 43.407 | 364 | 197 | 3 | 9 | 366 | 15 | 375 | 1.60e-109 | 327 |
| Msa0545590 | MtrunA17_Chr3g0119541 | 46.866 | 335 | 166 | 5 | 25 | 350 | 22 | 353 | 1.03e-98 | 298 |
| Msa0545590 | MtrunA17_Chr4g0034901 | 44.868 | 341 | 186 | 2 | 9 | 347 | 8 | 348 | 1.19e-97 | 298 |
| Msa0545590 | MtrunA17_Chr1g0177171 | 47.059 | 323 | 166 | 4 | 28 | 347 | 37 | 357 | 1.25e-95 | 294 |
| Msa0545590 | MtrunA17_Chr1g0146831 | 44.214 | 337 | 177 | 5 | 10 | 344 | 17 | 344 | 2.12e-95 | 290 |
| Msa0545590 | MtrunA17_Chr5g0439251 | 46.483 | 327 | 168 | 4 | 25 | 347 | 21 | 344 | 2.99e-95 | 293 |
| Msa0545590 | MtrunA17_Chr1g0155001 | 44.548 | 321 | 176 | 2 | 29 | 347 | 24 | 344 | 4.15e-95 | 290 |
| Msa0545590 | MtrunA17_Chr8g0389741 | 44.985 | 329 | 175 | 3 | 24 | 349 | 23 | 348 | 7.16e-95 | 292 |
| Msa0545590 | MtrunA17_Chr3g0144531 | 43.529 | 340 | 189 | 3 | 10 | 347 | 9 | 347 | 1.26e-94 | 290 |
| Msa0545590 | MtrunA17_Chr6g0487261 | 43.425 | 327 | 177 | 3 | 30 | 352 | 28 | 350 | 5.31e-90 | 280 |
| Msa0545590 | MtrunA17_Chr7g0234821 | 39.820 | 334 | 195 | 5 | 30 | 358 | 27 | 359 | 1.16e-86 | 270 |
| Msa0545590 | MtrunA17_Chr7g0223961 | 42.236 | 322 | 178 | 6 | 28 | 347 | 22 | 337 | 3.94e-84 | 263 |
| Msa0545590 | MtrunA17_Chr8g0339191 | 37.971 | 345 | 205 | 7 | 14 | 353 | 17 | 357 | 3.79e-79 | 251 |
| Msa0545590 | MtrunA17_Chr4g0046311 | 37.861 | 346 | 204 | 6 | 11 | 349 | 8 | 349 | 4.98e-79 | 251 |
| Msa0545590 | MtrunA17_Chr1g0161011 | 38.261 | 345 | 204 | 5 | 10 | 349 | 7 | 347 | 3.34e-78 | 249 |
| Msa0545590 | MtrunA17_Chr4g0043511 | 42.188 | 320 | 180 | 5 | 30 | 347 | 63 | 379 | 6.17e-77 | 247 |
| Msa0545590 | MtrunA17_Chr8g0378621 | 36.648 | 352 | 218 | 3 | 8 | 355 | 5 | 355 | 1.47e-75 | 242 |
| Msa0545590 | MtrunA17_Chr4g0039011 | 38.166 | 338 | 193 | 6 | 15 | 349 | 26 | 350 | 1.64e-73 | 233 |
| Msa0545590 | MtrunA17_Chr3g0110371 | 37.920 | 327 | 194 | 4 | 29 | 349 | 24 | 347 | 8.29e-73 | 235 |
| Msa0545590 | MtrunA17_Chr4g0075031 | 37.462 | 331 | 202 | 3 | 23 | 349 | 39 | 368 | 6.20e-72 | 234 |
| Msa0545590 | MtrunA17_Chr4g0038981 | 37.910 | 335 | 191 | 7 | 10 | 343 | 6 | 324 | 2.11e-71 | 226 |
| Msa0545590 | MtrunA17_Chr5g0434591 | 35.345 | 348 | 215 | 5 | 9 | 349 | 2 | 346 | 1.73e-70 | 229 |
| Msa0545590 | MtrunA17_Chr4g0038971 | 37.574 | 338 | 197 | 8 | 9 | 345 | 2 | 326 | 9.92e-70 | 222 |
| Msa0545590 | MtrunA17_Chr3g0121271 | 34.808 | 339 | 210 | 6 | 12 | 343 | 10 | 344 | 5.17e-69 | 225 |
| Msa0545590 | MtrunA17_Chr4g0038941 | 38.365 | 318 | 183 | 5 | 28 | 345 | 51 | 355 | 1.36e-68 | 220 |
| Msa0545590 | MtrunA17_Chr4g0039071 | 39.062 | 320 | 187 | 5 | 28 | 346 | 24 | 336 | 1.22e-67 | 218 |
| Msa0545590 | MtrunA17_Chr4g0038961 | 37.353 | 340 | 195 | 9 | 9 | 345 | 2 | 326 | 1.45e-67 | 216 |
| Msa0545590 | MtrunA17_Chr2g0294591 | 38.066 | 331 | 193 | 8 | 22 | 349 | 23 | 344 | 3.14e-65 | 211 |
| Msa0545590 | MtrunA17_Chr7g0250301 | 33.962 | 318 | 200 | 6 | 27 | 343 | 6 | 314 | 1.44e-63 | 206 |
| Msa0545590 | MtrunA17_Chr1g0174261 | 39.869 | 306 | 166 | 9 | 58 | 360 | 1 | 291 | 5.12e-63 | 205 |
| Msa0545590 | MtrunA17_Chr2g0294601 | 35.362 | 345 | 213 | 7 | 7 | 349 | 37 | 373 | 5.12e-63 | 207 |
| Msa0545590 | MtrunA17_Chr4g0039021 | 38.062 | 289 | 163 | 7 | 55 | 339 | 7 | 283 | 1.56e-58 | 192 |
| Msa0545590 | MtrunA17_Chr8g0383311 | 33.232 | 328 | 204 | 10 | 30 | 349 | 44 | 364 | 9.63e-56 | 191 |
| Msa0545590 | MtrunA17_Chr1g0148391 | 32.153 | 367 | 219 | 13 | 7 | 363 | 6 | 352 | 3.54e-52 | 181 |
| Msa0545590 | MtrunA17_Chr7g0250321 | 31.399 | 293 | 192 | 5 | 7 | 298 | 6 | 290 | 1.72e-48 | 166 |
| Msa0545590 | MtrunA17_Chr2g0290821 | 33.739 | 329 | 203 | 10 | 28 | 347 | 27 | 349 | 4.91e-48 | 170 |
| Msa0545590 | MtrunA17_Chr4g0069801 | 29.323 | 399 | 248 | 15 | 4 | 378 | 3 | 391 | 6.24e-48 | 169 |
| Msa0545590 | MtrunA17_Chr3g0138741 | 33.129 | 326 | 203 | 10 | 30 | 347 | 32 | 350 | 7.58e-48 | 169 |
| Msa0545590 | MtrunA17_Chr5g0436361 | 34.259 | 324 | 200 | 9 | 26 | 344 | 34 | 349 | 6.79e-47 | 164 |
| Msa0545590 | MtrunA17_Chr7g0253091 | 31.180 | 356 | 223 | 13 | 28 | 371 | 25 | 370 | 8.37e-47 | 166 |
| Msa0545590 | MtrunA17_Chr6g0461601 | 32.011 | 353 | 214 | 13 | 5 | 343 | 4 | 344 | 3.70e-46 | 164 |
| Msa0545590 | MtrunA17_Chr3g0129341 | 31.176 | 340 | 209 | 15 | 28 | 353 | 33 | 361 | 3.56e-44 | 159 |
| Msa0545590 | MtrunA17_Chr4g0062771 | 31.680 | 363 | 221 | 14 | 2 | 350 | 6 | 355 | 9.18e-44 | 158 |
| Msa0545590 | MtrunA17_Chr4g0076581 | 32.692 | 364 | 216 | 13 | 28 | 369 | 32 | 388 | 1.01e-43 | 158 |
| Msa0545590 | MtrunA17_Chr2g0306311 | 28.800 | 375 | 221 | 12 | 10 | 349 | 16 | 379 | 1.19e-40 | 150 |
| Msa0545590 | MtrunA17_Chr3g0105981 | 30.816 | 331 | 211 | 11 | 28 | 349 | 26 | 347 | 2.52e-39 | 145 |
| Msa0545590 | MtrunA17_Chr2g0294581 | 28.436 | 211 | 139 | 5 | 22 | 225 | 69 | 274 | 4.68e-19 | 86.7 |
| Msa0545590 | MtrunA17_Chr4g0018771 | 41.667 | 96 | 49 | 4 | 251 | 345 | 86 | 175 | 9.44e-15 | 72.8 |
| Msa0545590 | MtrunA17_Chr4g0018861 | 41.304 | 92 | 47 | 4 | 255 | 345 | 88 | 173 | 3.04e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0545590 | AT2G27500.2 | 63.478 | 345 | 125 | 1 | 23 | 366 | 23 | 367 | 1.97e-173 | 488 |
| Msa0545590 | AT2G27500.1 | 62.185 | 357 | 134 | 1 | 23 | 378 | 23 | 379 | 2.17e-173 | 489 |
| Msa0545590 | AT2G27500.3 | 60.797 | 301 | 117 | 1 | 79 | 378 | 1 | 301 | 1.12e-142 | 408 |
| Msa0545590 | AT1G32860.1 | 54.155 | 349 | 158 | 1 | 1 | 347 | 1 | 349 | 1.60e-139 | 404 |
| Msa0545590 | AT5G42100.2 | 54.012 | 324 | 146 | 2 | 28 | 348 | 26 | 349 | 2.72e-125 | 368 |
| Msa0545590 | AT5G42100.1 | 54.012 | 324 | 146 | 2 | 28 | 348 | 26 | 349 | 4.90e-125 | 367 |
| Msa0545590 | AT4G18340.2 | 48.711 | 349 | 174 | 3 | 3 | 347 | 5 | 352 | 6.79e-123 | 360 |
| Msa0545590 | AT4G18340.1 | 48.711 | 349 | 174 | 3 | 3 | 347 | 5 | 352 | 7.61e-123 | 361 |
| Msa0545590 | AT1G30080.2 | 48.368 | 337 | 174 | 0 | 10 | 346 | 17 | 353 | 2.92e-117 | 346 |
| Msa0545590 | AT1G30080.1 | 48.368 | 337 | 174 | 0 | 10 | 346 | 17 | 353 | 4.30e-117 | 347 |
| Msa0545590 | AT3G15800.1 | 47.262 | 347 | 179 | 3 | 28 | 370 | 42 | 388 | 1.12e-115 | 343 |
| Msa0545590 | AT2G26600.1 | 42.308 | 364 | 203 | 3 | 23 | 379 | 25 | 388 | 1.25e-110 | 329 |
| Msa0545590 | AT4G26830.1 | 46.154 | 338 | 178 | 3 | 10 | 345 | 6 | 341 | 2.47e-103 | 313 |
| Msa0545590 | AT4G26830.2 | 47.799 | 318 | 162 | 3 | 30 | 345 | 30 | 345 | 6.19e-103 | 312 |
| Msa0545590 | AT5G55180.2 | 44.510 | 337 | 178 | 4 | 15 | 349 | 19 | 348 | 7.58e-97 | 296 |
| Msa0545590 | AT5G55180.1 | 44.510 | 337 | 178 | 4 | 15 | 349 | 19 | 348 | 1.32e-96 | 296 |
| Msa0545590 | AT2G05790.1 | 46.584 | 322 | 165 | 4 | 28 | 345 | 24 | 342 | 1.22e-94 | 291 |
| Msa0545590 | AT4G34480.2 | 44.543 | 339 | 186 | 2 | 11 | 347 | 7 | 345 | 2.80e-94 | 286 |
| Msa0545590 | AT2G16230.1 | 45.231 | 325 | 176 | 2 | 25 | 347 | 20 | 344 | 6.33e-94 | 290 |
| Msa0545590 | AT4G34480.1 | 43.714 | 350 | 195 | 2 | 11 | 358 | 7 | 356 | 3.49e-92 | 286 |
| Msa0545590 | AT5G24318.4 | 43.168 | 322 | 177 | 3 | 28 | 347 | 29 | 346 | 3.99e-92 | 281 |
| Msa0545590 | AT2G26600.2 | 43.493 | 292 | 162 | 1 | 91 | 379 | 3 | 294 | 8.46e-92 | 278 |
| Msa0545590 | AT5G24318.2 | 43.168 | 322 | 177 | 3 | 28 | 347 | 29 | 346 | 1.45e-90 | 280 |
| Msa0545590 | AT5G24318.1 | 43.168 | 322 | 177 | 3 | 28 | 347 | 29 | 346 | 1.74e-90 | 280 |
| Msa0545590 | AT5G42720.1 | 42.733 | 344 | 186 | 4 | 6 | 347 | 12 | 346 | 3.97e-90 | 278 |
| Msa0545590 | AT5G56590.1 | 41.718 | 326 | 188 | 2 | 26 | 349 | 23 | 348 | 1.18e-87 | 274 |
| Msa0545590 | AT4G29360.1 | 42.690 | 342 | 193 | 3 | 10 | 349 | 7 | 347 | 3.70e-84 | 266 |
| Msa0545590 | AT4G29360.2 | 42.571 | 350 | 196 | 4 | 4 | 349 | 9 | 357 | 4.57e-84 | 266 |
| Msa0545590 | AT3G07320.1 | 40.356 | 337 | 191 | 6 | 22 | 349 | 14 | 349 | 5.36e-83 | 261 |
| Msa0545590 | AT2G01630.2 | 39.692 | 325 | 191 | 3 | 29 | 349 | 23 | 346 | 2.01e-79 | 249 |
| Msa0545590 | AT2G01630.3 | 39.692 | 325 | 191 | 3 | 29 | 349 | 23 | 346 | 5.32e-79 | 250 |
| Msa0545590 | AT2G01630.1 | 39.692 | 325 | 191 | 3 | 29 | 349 | 23 | 346 | 5.31e-78 | 249 |
| Msa0545590 | AT2G39640.1 | 39.706 | 340 | 195 | 5 | 10 | 347 | 9 | 340 | 6.89e-77 | 248 |
| Msa0545590 | AT4G16260.1 | 38.690 | 336 | 198 | 4 | 10 | 345 | 5 | 332 | 1.03e-76 | 241 |
| Msa0545590 | AT4G14080.1 | 38.226 | 327 | 197 | 4 | 30 | 352 | 43 | 368 | 7.07e-76 | 243 |
| Msa0545590 | AT3G23770.1 | 37.746 | 355 | 203 | 6 | 30 | 367 | 38 | 391 | 3.31e-74 | 239 |
| Msa0545590 | AT3G55430.1 | 39.244 | 344 | 189 | 11 | 28 | 360 | 28 | 362 | 4.26e-74 | 238 |
| Msa0545590 | AT4G16260.2 | 39.355 | 310 | 180 | 4 | 36 | 345 | 2 | 303 | 8.37e-73 | 230 |
| Msa0545590 | AT3G13560.4 | 35.913 | 323 | 202 | 3 | 25 | 343 | 22 | 343 | 7.14e-72 | 233 |
| Msa0545590 | AT3G13560.1 | 35.913 | 323 | 202 | 3 | 25 | 343 | 22 | 343 | 7.14e-72 | 233 |
| Msa0545590 | AT3G13560.2 | 35.913 | 323 | 202 | 3 | 25 | 343 | 22 | 343 | 7.14e-72 | 233 |
| Msa0545590 | AT3G13560.5 | 35.913 | 323 | 202 | 3 | 25 | 343 | 22 | 343 | 7.14e-72 | 233 |
| Msa0545590 | AT3G13560.3 | 35.913 | 323 | 202 | 3 | 25 | 343 | 22 | 343 | 7.14e-72 | 233 |
| Msa0545590 | AT1G11820.1 | 37.037 | 324 | 199 | 3 | 30 | 349 | 45 | 367 | 1.60e-70 | 226 |
| Msa0545590 | AT1G11820.3 | 37.037 | 324 | 199 | 3 | 30 | 349 | 45 | 367 | 1.59e-69 | 226 |
| Msa0545590 | AT1G11820.2 | 37.037 | 324 | 199 | 3 | 30 | 349 | 45 | 367 | 4.10e-69 | 226 |
| Msa0545590 | AT3G57270.1 | 37.152 | 323 | 191 | 7 | 26 | 345 | 24 | 337 | 6.55e-69 | 221 |
| Msa0545590 | AT4G34480.3 | 47.737 | 243 | 127 | 0 | 116 | 358 | 3 | 245 | 1.03e-67 | 219 |
| Msa0545590 | AT3G46570.1 | 38.081 | 344 | 200 | 9 | 10 | 348 | 10 | 345 | 6.99e-67 | 216 |
| Msa0545590 | AT1G66250.1 | 35.714 | 322 | 201 | 4 | 26 | 343 | 29 | 348 | 6.66e-66 | 218 |
| Msa0545590 | AT3G61810.1 | 34.056 | 323 | 197 | 5 | 30 | 345 | 56 | 369 | 3.12e-61 | 202 |
| Msa0545590 | AT5G24318.3 | 45.024 | 211 | 111 | 2 | 138 | 347 | 1 | 207 | 1.30e-58 | 193 |
| Msa0545590 | AT3G57260.1 | 33.234 | 337 | 211 | 7 | 10 | 345 | 13 | 336 | 2.85e-58 | 193 |
| Msa0545590 | AT3G57260.2 | 33.234 | 337 | 211 | 7 | 10 | 345 | 29 | 352 | 7.44e-58 | 192 |
| Msa0545590 | AT1G77780.1 | 34.018 | 341 | 214 | 8 | 6 | 345 | 2 | 332 | 5.24e-57 | 191 |
| Msa0545590 | AT1G77790.1 | 35.110 | 319 | 196 | 7 | 30 | 345 | 31 | 341 | 9.13e-57 | 189 |
| Msa0545590 | AT5G20340.1 | 36.137 | 321 | 193 | 9 | 28 | 345 | 42 | 353 | 3.71e-56 | 188 |
| Msa0545590 | AT3G57240.1 | 34.603 | 315 | 191 | 8 | 30 | 343 | 36 | 336 | 1.21e-54 | 184 |
| Msa0545590 | AT5G20390.1 | 33.631 | 336 | 211 | 7 | 13 | 345 | 17 | 343 | 2.02e-54 | 183 |
| Msa0545590 | AT5G20330.1 | 33.913 | 345 | 216 | 9 | 4 | 345 | 9 | 344 | 9.53e-53 | 179 |
| Msa0545590 | AT1G64760.1 | 32.948 | 346 | 213 | 12 | 13 | 349 | 11 | 346 | 4.85e-50 | 175 |
| Msa0545590 | AT1G64760.2 | 32.948 | 346 | 213 | 12 | 13 | 349 | 11 | 346 | 4.85e-50 | 175 |
| Msa0545590 | AT3G55780.1 | 36.634 | 303 | 176 | 9 | 42 | 336 | 48 | 342 | 7.26e-50 | 172 |
| Msa0545590 | AT2G19440.2 | 32.312 | 359 | 224 | 12 | 22 | 371 | 16 | 364 | 8.57e-49 | 172 |
| Msa0545590 | AT2G19440.1 | 32.312 | 359 | 224 | 12 | 22 | 371 | 16 | 364 | 8.57e-49 | 172 |
| Msa0545590 | AT1G33220.1 | 31.977 | 344 | 214 | 8 | 4 | 345 | 9 | 334 | 1.94e-48 | 167 |
| Msa0545590 | AT5G20870.1 | 32.982 | 379 | 221 | 16 | 1 | 359 | 1 | 366 | 5.06e-48 | 170 |
| Msa0545590 | AT5G18220.1 | 28.883 | 367 | 247 | 10 | 11 | 371 | 13 | 371 | 7.63e-47 | 167 |
| Msa0545590 | AT3G04010.1 | 30.481 | 374 | 239 | 10 | 9 | 371 | 13 | 376 | 2.67e-44 | 160 |
| Msa0545590 | AT5G58090.1 | 31.707 | 328 | 209 | 10 | 28 | 347 | 21 | 341 | 3.90e-44 | 159 |
| Msa0545590 | AT4G31140.1 | 29.885 | 348 | 223 | 11 | 11 | 347 | 9 | 346 | 5.40e-44 | 159 |
| Msa0545590 | AT5G64790.1 | 28.045 | 353 | 239 | 10 | 28 | 372 | 27 | 372 | 1.92e-42 | 155 |
| Msa0545590 | AT3G24330.1 | 31.714 | 350 | 222 | 11 | 10 | 349 | 20 | 362 | 1.60e-41 | 153 |
| Msa0545590 | AT5G58480.1 | 31.889 | 323 | 205 | 9 | 30 | 344 | 27 | 342 | 5.42e-41 | 151 |
| Msa0545590 | AT5G20560.1 | 30.240 | 334 | 219 | 8 | 10 | 337 | 11 | 336 | 7.14e-39 | 142 |
| Msa0545590 | AT4G17180.1 | 29.179 | 329 | 211 | 11 | 28 | 347 | 24 | 339 | 4.32e-36 | 137 |
Find 83 sgRNAs with CRISPR-Local
Find 226 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGTTATGCAATTTATTT+TGG | 0.148253 | 4_1:-36043577 | None:intergenic |
| TCAAATGTTGAATTTGTTAT+AGG | 0.179247 | 4_1:+36043465 | Msa0545590:CDS |
| ACCCTTCTAAAGCTCAAAAT+TGG | 0.203490 | 4_1:+36043520 | Msa0545590:CDS |
| GTTGAATTTGTTATAGGAAT+TGG | 0.226002 | 4_1:+36043471 | Msa0545590:CDS |
| CAAATCAATGGCCTAAGTTT+TGG | 0.237417 | 4_1:+36043312 | Msa0545590:CDS |
| AACAAATTCAACATTTGATT+TGG | 0.238369 | 4_1:-36043460 | None:intergenic |
| TTCTTTCTTCTCACCATATC+AGG | 0.241529 | 4_1:+36043189 | Msa0545590:CDS |
| ATGTTTGATCTTTGCTTTAG+AGG | 0.263954 | 4_1:+36044668 | Msa0545590:CDS |
| TAGTTTAAAGATACCTCATT+AGG | 0.279200 | 4_1:-36043879 | None:intergenic |
| ATCTGATCTTTGATTATAAT+AGG | 0.304235 | 4_1:-36043124 | None:intergenic |
| GAGAAAGCAAGTAGAACATT+TGG | 0.321710 | 4_1:-36043438 | None:intergenic |
| AGTTTATAACATTGGATTAC+AGG | 0.325008 | 4_1:+36044268 | Msa0545590:CDS |
| AATGGCGACGCCGATGAAAT+TGG | 0.330096 | 4_1:+36044059 | Msa0545590:CDS |
| TTTCAATGTTCTTGCATGTA+TGG | 0.347057 | 4_1:+36044641 | Msa0545590:CDS |
| TCATCAAGAAATTCAACAAT+TGG | 0.359860 | 4_1:-36043801 | None:intergenic |
| ATTGGAACCAATGGATTTCC+AGG | 0.366015 | 4_1:-36044152 | None:intergenic |
| TCATAATGTAAATTTGTGTT+TGG | 0.368318 | 4_1:-36043936 | None:intergenic |
| AAATATTAAGGAACCTGATA+TGG | 0.368766 | 4_1:-36043202 | None:intergenic |
| ATTTCAACCAAATGAAGGTT+TGG | 0.371282 | 4_1:+36043908 | Msa0545590:CDS |
| TATGCTGCAATCAAAGTGAT+AGG | 0.372456 | 4_1:+36043990 | Msa0545590:CDS |
| GGATCAACCAAACCTTCATT+TGG | 0.387383 | 4_1:-36043915 | None:intergenic |
| GTATACCAATGTTGAAGTTA+AGG | 0.389324 | 4_1:+36044013 | Msa0545590:CDS |
| TGTAATCCAATGTTATAAAC+TGG | 0.399547 | 4_1:-36044266 | None:intergenic |
| CCTGCTTCAGAAAGAAACTA+TGG | 0.401079 | 4_1:+36044221 | Msa0545590:CDS |
| AGTTTAAAGATACCTCATTA+GGG | 0.402444 | 4_1:-36043878 | None:intergenic |
| CATAATTCTCTTGTTAAGCT+TGG | 0.406983 | 4_1:+36043669 | Msa0545590:CDS |
| GATTCATTTATGCAAATCAA+TGG | 0.436820 | 4_1:+36043300 | Msa0545590:intron |
| CCATAGTTTCTTTCTGAAGC+AGG | 0.437326 | 4_1:-36044221 | None:intergenic |
| TATGAATACTGGATCTATAG+TGG | 0.438871 | 4_1:+36044820 | Msa0545590:three_prime_UTR |
| GAAGTTAAGGTTTCTGAGAC+AGG | 0.447516 | 4_1:+36044026 | Msa0545590:CDS |
| CTGTTGTAACAGTAATTACT+TGG | 0.448483 | 4_1:-36043698 | None:intergenic |
| AAGTGATTTGAAGAAGGAAA+AGG | 0.449912 | 4_1:-36043163 | None:intergenic |
| CACGTGGATCATATGAATAC+TGG | 0.450386 | 4_1:+36044809 | Msa0545590:three_prime_UTR |
| AATTCTTACCCTCCTTCGTC+CGG | 0.452125 | 4_1:+36043744 | Msa0545590:CDS |
| TATAATAGGAAACAATATCT+AGG | 0.457728 | 4_1:-36043110 | None:intergenic |
| AAAATAAATTGCATAACTGT+TGG | 0.468767 | 4_1:+36043579 | Msa0545590:CDS |
| CAAATCTGACCTAAAAGAAC+CGG | 0.469027 | 4_1:-36043763 | None:intergenic |
| ACAGGGTTATCTACCACAAA+TGG | 0.472431 | 4_1:+36044286 | Msa0545590:CDS |
| GAGACAGGTTGGCCTTCAAA+TGG | 0.474442 | 4_1:+36044041 | Msa0545590:CDS |
| ATACTTTAATGAGGAGGAAG+AGG | 0.475150 | 4_1:-36043007 | None:intergenic |
| GCATTATTTCAACCAAATGA+AGG | 0.475383 | 4_1:+36043903 | Msa0545590:CDS |
| AGCTGATATATATTATATAT+AGG | 0.476570 | 4_1:-36044853 | None:intergenic |
| CATAGTTTATTCCAAAACTT+AGG | 0.484241 | 4_1:-36043323 | None:intergenic |
| GGTAGACCAGTTTATAACAT+TGG | 0.488178 | 4_1:+36044260 | Msa0545590:CDS |
| GAAAAGAAGTGATTTGAAGA+AGG | 0.488719 | 4_1:-36043169 | None:intergenic |
| TTTCTTTCTGAAGCAGGACC+AGG | 0.491860 | 4_1:-36044215 | None:intergenic |
| AAATTTGCTTAGAAGAATTG+AGG | 0.496626 | 4_1:+36044115 | Msa0545590:CDS |
| TTATAAACTGGTCTACCATC+AGG | 0.497918 | 4_1:-36044254 | None:intergenic |
| TTGGATGGCACAACCATTTG+TGG | 0.503269 | 4_1:-36044299 | None:intergenic |
| TATACATCAATTGGAACCAA+TGG | 0.507282 | 4_1:-36044161 | None:intergenic |
| TCATCGGCGTCGCCATTTGA+AGG | 0.508122 | 4_1:-36044053 | None:intergenic |
| TGGTGTAGCACCAATTTCAT+CGG | 0.510200 | 4_1:-36044069 | None:intergenic |
| AAAGTGAGGTGATGCAAAGT+TGG | 0.515613 | 4_1:-36043082 | None:intergenic |
| ATATTAAATATACTTTAATG+AGG | 0.516790 | 4_1:-36043016 | None:intergenic |
| GAGGTGAGGGAATATTCAAA+TGG | 0.520983 | 4_1:+36044687 | Msa0545590:CDS |
| AGAAACCTTAACTTCAACAT+TGG | 0.523456 | 4_1:-36044018 | None:intergenic |
| TTGCTTACATTAGATTTGGA+TGG | 0.524160 | 4_1:-36044314 | None:intergenic |
| TCTTGAATGAGATGGTAGAT+TGG | 0.531449 | 4_1:-36043358 | None:intergenic |
| GATCTTTGCTTTAGAGGTGA+GGG | 0.533155 | 4_1:+36044674 | Msa0545590:CDS |
| TGATCTTTGCTTTAGAGGTG+AGG | 0.547311 | 4_1:+36044673 | Msa0545590:CDS |
| TATGGACTTTATTATCCTGA+TGG | 0.553442 | 4_1:+36044239 | Msa0545590:CDS |
| TTTAATGAAGATTTGAAACC+TGG | 0.554891 | 4_1:+36044197 | Msa0545590:CDS |
| TTAAGGTTTCTGAGACAGGT+TGG | 0.560373 | 4_1:+36044030 | Msa0545590:CDS |
| TAAAAGAACCGGACGAAGGA+GGG | 0.563985 | 4_1:-36043752 | None:intergenic |
| AGGAACTCCTGGAAATCCAT+TGG | 0.567821 | 4_1:+36044145 | Msa0545590:CDS |
| TTAAATATACTTTAATGAGG+AGG | 0.569230 | 4_1:-36043013 | None:intergenic |
| TCTAGTCTTGAAAACATGGT+TGG | 0.571691 | 4_1:+36042975 | Msa0545590:five_prime_UTR |
| AATGTGTGAGTGTGGCATCA+TGG | 0.572693 | 4_1:-36043053 | None:intergenic |
| CTTTAATGAGGAGGAAGAGG+AGG | 0.591171 | 4_1:-36043004 | None:intergenic |
| ATGCTGCAATCAAAGTGATA+GGG | 0.595645 | 4_1:+36043991 | Msa0545590:CDS |
| GTTTATAACATTGGATTACA+GGG | 0.597138 | 4_1:+36044269 | Msa0545590:CDS |
| ACTGCAACTCTTGAATGAGA+TGG | 0.599503 | 4_1:-36043366 | None:intergenic |
| TTTAATGAGGAGGAAGAGGA+GGG | 0.600847 | 4_1:-36043003 | None:intergenic |
| AAACTCTAGTCTTGAAAACA+TGG | 0.602423 | 4_1:+36042971 | Msa0545590:five_prime_UTR |
| CTAAAAGAACCGGACGAAGG+AGG | 0.620046 | 4_1:-36043753 | None:intergenic |
| ATATAAAGATAACCCTAATG+AGG | 0.620782 | 4_1:+36043866 | Msa0545590:CDS |
| ATATCTAGGCACAGAAAGTG+AGG | 0.627755 | 4_1:-36043096 | None:intergenic |
| CAAAATGCAAAATTGTACAA+TGG | 0.632067 | 4_1:+36044092 | Msa0545590:CDS |
| GGATTAATAATGTGTGAGTG+TGG | 0.658541 | 4_1:-36043061 | None:intergenic |
| GACCTAAAAGAACCGGACGA+AGG | 0.662778 | 4_1:-36043756 | None:intergenic |
| TTAATGAGGAGGAAGAGGAG+GGG | 0.680651 | 4_1:-36043002 | None:intergenic |
| CAGTATTCATATGATCCACG+TGG | 0.708224 | 4_1:-36044808 | None:intergenic |
| TATTTCTTAGATATACCACG+TGG | 0.782070 | 4_1:+36044793 | Msa0545590:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAATATACTTTAATG+AGG | - | chr4_1:36043019-36043038 | None:intergenic | 10.0% |
| !! | ATATTAAATATACTTTAATG+AGG | - | chr4_1:36043019-36043038 | None:intergenic | 10.0% |
| !! | TATCTTTATATGCAAAAAAA+GGG | - | chr4_1:36043857-36043876 | None:intergenic | 15.0% |
| !! | TTATCTTTATATGCAAAAAA+AGG | - | chr4_1:36043858-36043877 | None:intergenic | 15.0% |
| !! | TTAAAAACTACTACATAAAT+TGG | - | chr4_1:36044574-36044593 | None:intergenic | 15.0% |
| !! | AAAATGAAAAAACAATATTC+AGG | - | chr4_1:36044715-36044734 | None:intergenic | 15.0% |
| !! | TATCTTTATATGCAAAAAAA+GGG | - | chr4_1:36043857-36043876 | None:intergenic | 15.0% |
| !! | TTATCTTTATATGCAAAAAA+AGG | - | chr4_1:36043858-36043877 | None:intergenic | 15.0% |
| !! | TTAAAAACTACTACATAAAT+TGG | - | chr4_1:36044574-36044593 | None:intergenic | 15.0% |
| !! | AAAATGAAAAAACAATATTC+AGG | - | chr4_1:36044715-36044734 | None:intergenic | 15.0% |
| !! | TTAAATATACTTTAATGAGG+AGG | - | chr4_1:36043016-36043035 | None:intergenic | 20.0% |
| !! | TATAATAGGAAACAATATCT+AGG | - | chr4_1:36043113-36043132 | None:intergenic | 20.0% |
| !! | ATCTGATCTTTGATTATAAT+AGG | - | chr4_1:36043127-36043146 | None:intergenic | 20.0% |
| !! | TAGAGAGAAGATAAATATTA+AGG | - | chr4_1:36043217-36043236 | None:intergenic | 20.0% |
| !! | AACAAATTCAACATTTGATT+TGG | - | chr4_1:36043463-36043482 | None:intergenic | 20.0% |
| !!! | TCAAATGTTGAATTTGTTAT+AGG | + | chr4_1:36043465-36043484 | Msa0545590:CDS | 20.0% |
| !!! | AATTTATTTTGGTTTGTGAA+AGG | - | chr4_1:36043569-36043588 | None:intergenic | 20.0% |
| !!! | AACAGTTATGCAATTTATTT+TGG | - | chr4_1:36043580-36043599 | None:intergenic | 20.0% |
| !! | AAAATAAATTGCATAACTGT+TGG | + | chr4_1:36043579-36043598 | Msa0545590:CDS | 20.0% |
| !! | TCATAATGTAAATTTGTGTT+TGG | - | chr4_1:36043939-36043958 | None:intergenic | 20.0% |
| !!! | AATTTTGCTTACATTAGATT+TGG | - | chr4_1:36044321-36044340 | None:intergenic | 20.0% |
| !! | ACATATAAATTATTCGTGAA+AGG | - | chr4_1:36044351-36044370 | None:intergenic | 20.0% |
| !! | TTAAATATACTTTAATGAGG+AGG | - | chr4_1:36043016-36043035 | None:intergenic | 20.0% |
| !! | TATAATAGGAAACAATATCT+AGG | - | chr4_1:36043113-36043132 | None:intergenic | 20.0% |
| !! | ATCTGATCTTTGATTATAAT+AGG | - | chr4_1:36043127-36043146 | None:intergenic | 20.0% |
| !! | TAGAGAGAAGATAAATATTA+AGG | - | chr4_1:36043217-36043236 | None:intergenic | 20.0% |
| !! | AACAAATTCAACATTTGATT+TGG | - | chr4_1:36043463-36043482 | None:intergenic | 20.0% |
| !!! | TCAAATGTTGAATTTGTTAT+AGG | + | chr4_1:36043465-36043484 | Msa0545590:CDS | 20.0% |
| !!! | AATTTATTTTGGTTTGTGAA+AGG | - | chr4_1:36043569-36043588 | None:intergenic | 20.0% |
| !!! | AACAGTTATGCAATTTATTT+TGG | - | chr4_1:36043580-36043599 | None:intergenic | 20.0% |
| !! | AAAATAAATTGCATAACTGT+TGG | + | chr4_1:36043579-36043598 | Msa0545590:CDS | 20.0% |
| !! | TCATAATGTAAATTTGTGTT+TGG | - | chr4_1:36043939-36043958 | None:intergenic | 20.0% |
| !!! | AATTTTGCTTACATTAGATT+TGG | - | chr4_1:36044321-36044340 | None:intergenic | 20.0% |
| !! | ACATATAAATTATTCGTGAA+AGG | - | chr4_1:36044351-36044370 | None:intergenic | 20.0% |
| !!! | GATTTTGATTACAACTTTGT+TGG | - | chr4_1:36042936-36042955 | None:intergenic | 25.0% |
| ! | AAATATTAAGGAACCTGATA+TGG | - | chr4_1:36043205-36043224 | None:intergenic | 25.0% |
| ! | GATTCATTTATGCAAATCAA+TGG | + | chr4_1:36043300-36043319 | Msa0545590:intron | 25.0% |
| ! | CATAGTTTATTCCAAAACTT+AGG | - | chr4_1:36043326-36043345 | None:intergenic | 25.0% |
| !!! | CTAAGTTTTGGAATAAACTA+TGG | + | chr4_1:36043324-36043343 | Msa0545590:CDS | 25.0% |
| !!! | GTTGAATTTGTTATAGGAAT+TGG | + | chr4_1:36043471-36043490 | Msa0545590:CDS | 25.0% |
| !! | TTATGAACATTTTGCATTGA+AGG | - | chr4_1:36043654-36043673 | None:intergenic | 25.0% |
| !! | AGCTCATTCTTTTAACATTT+TGG | + | chr4_1:36043719-36043738 | Msa0545590:CDS | 25.0% |
| ! | TCATCAAGAAATTCAACAAT+TGG | - | chr4_1:36043804-36043823 | None:intergenic | 25.0% |
| ! | ATATAAAGATAACCCTAATG+AGG | + | chr4_1:36043866-36043885 | Msa0545590:CDS | 25.0% |
| ! | AGTTTAAAGATACCTCATTA+GGG | - | chr4_1:36043881-36043900 | None:intergenic | 25.0% |
| ! | TAGTTTAAAGATACCTCATT+AGG | - | chr4_1:36043882-36043901 | None:intergenic | 25.0% |
| !! | TTGTACAATTTTGCATTTTG+TGG | - | chr4_1:36044092-36044111 | None:intergenic | 25.0% |
| ! | CAAAATGCAAAATTGTACAA+TGG | + | chr4_1:36044092-36044111 | Msa0545590:CDS | 25.0% |
| !! | AAATTTGCTTAGAAGAATTG+AGG | + | chr4_1:36044115-36044134 | Msa0545590:CDS | 25.0% |
| ! | GCAAAAACATATACATCAAT+TGG | - | chr4_1:36044173-36044192 | None:intergenic | 25.0% |
| !! | TTTAATGAAGATTTGAAACC+TGG | + | chr4_1:36044197-36044216 | Msa0545590:CDS | 25.0% |
| ! | TGTAATCCAATGTTATAAAC+TGG | - | chr4_1:36044269-36044288 | None:intergenic | 25.0% |
| ! | AGTTTATAACATTGGATTAC+AGG | + | chr4_1:36044268-36044287 | Msa0545590:CDS | 25.0% |
| ! | GTTTATAACATTGGATTACA+GGG | + | chr4_1:36044269-36044288 | Msa0545590:CDS | 25.0% |
| ! | GAATAATTTATATGTACCGA+CGG | + | chr4_1:36044356-36044375 | Msa0545590:intron | 25.0% |
| ! | AGAAAAAAAATTTGTACCGT+CGG | - | chr4_1:36044375-36044394 | None:intergenic | 25.0% |
| ! | GATTTGATGTATGTGTAAAA+AGG | + | chr4_1:36044483-36044502 | Msa0545590:intron | 25.0% |
| ! | ATGTTTGGCAATTAGATTAT+AGG | + | chr4_1:36044544-36044563 | Msa0545590:intron | 25.0% |
| !! | TCTAATTTCCTTGCAATTTT+TGG | + | chr4_1:36044735-36044754 | Msa0545590:three_prime_UTR | 25.0% |
| !! | CTAATTTCCTTGCAATTTTT+GGG | + | chr4_1:36044736-36044755 | Msa0545590:three_prime_UTR | 25.0% |
| !!! | GATTTTGATTACAACTTTGT+TGG | - | chr4_1:36042936-36042955 | None:intergenic | 25.0% |
| ! | AAATATTAAGGAACCTGATA+TGG | - | chr4_1:36043205-36043224 | None:intergenic | 25.0% |
| ! | GATTCATTTATGCAAATCAA+TGG | + | chr4_1:36043300-36043319 | Msa0545590:intron | 25.0% |
| ! | CATAGTTTATTCCAAAACTT+AGG | - | chr4_1:36043326-36043345 | None:intergenic | 25.0% |
| !!! | CTAAGTTTTGGAATAAACTA+TGG | + | chr4_1:36043324-36043343 | Msa0545590:CDS | 25.0% |
| !!! | GTTGAATTTGTTATAGGAAT+TGG | + | chr4_1:36043471-36043490 | Msa0545590:CDS | 25.0% |
| !! | TTATGAACATTTTGCATTGA+AGG | - | chr4_1:36043654-36043673 | None:intergenic | 25.0% |
| !! | AGCTCATTCTTTTAACATTT+TGG | + | chr4_1:36043719-36043738 | Msa0545590:CDS | 25.0% |
| ! | TCATCAAGAAATTCAACAAT+TGG | - | chr4_1:36043804-36043823 | None:intergenic | 25.0% |
| ! | ATATAAAGATAACCCTAATG+AGG | + | chr4_1:36043866-36043885 | Msa0545590:CDS | 25.0% |
| ! | AGTTTAAAGATACCTCATTA+GGG | - | chr4_1:36043881-36043900 | None:intergenic | 25.0% |
| ! | TAGTTTAAAGATACCTCATT+AGG | - | chr4_1:36043882-36043901 | None:intergenic | 25.0% |
| !! | TTGTACAATTTTGCATTTTG+TGG | - | chr4_1:36044092-36044111 | None:intergenic | 25.0% |
| ! | CAAAATGCAAAATTGTACAA+TGG | + | chr4_1:36044092-36044111 | Msa0545590:CDS | 25.0% |
| !! | AAATTTGCTTAGAAGAATTG+AGG | + | chr4_1:36044115-36044134 | Msa0545590:CDS | 25.0% |
| ! | GCAAAAACATATACATCAAT+TGG | - | chr4_1:36044173-36044192 | None:intergenic | 25.0% |
| !! | TTTAATGAAGATTTGAAACC+TGG | + | chr4_1:36044197-36044216 | Msa0545590:CDS | 25.0% |
| ! | TGTAATCCAATGTTATAAAC+TGG | - | chr4_1:36044269-36044288 | None:intergenic | 25.0% |
| ! | AGTTTATAACATTGGATTAC+AGG | + | chr4_1:36044268-36044287 | Msa0545590:CDS | 25.0% |
| ! | GTTTATAACATTGGATTACA+GGG | + | chr4_1:36044269-36044288 | Msa0545590:CDS | 25.0% |
| ! | GAATAATTTATATGTACCGA+CGG | + | chr4_1:36044356-36044375 | Msa0545590:intron | 25.0% |
| ! | AGAAAAAAAATTTGTACCGT+CGG | - | chr4_1:36044375-36044394 | None:intergenic | 25.0% |
| ! | GATTTGATGTATGTGTAAAA+AGG | + | chr4_1:36044483-36044502 | Msa0545590:intron | 25.0% |
| ! | ATGTTTGGCAATTAGATTAT+AGG | + | chr4_1:36044544-36044563 | Msa0545590:intron | 25.0% |
| !! | TCTAATTTCCTTGCAATTTT+TGG | + | chr4_1:36044735-36044754 | Msa0545590:three_prime_UTR | 25.0% |
| !! | CTAATTTCCTTGCAATTTTT+GGG | + | chr4_1:36044736-36044755 | Msa0545590:three_prime_UTR | 25.0% |
| !! | AAACTCTAGTCTTGAAAACA+TGG | + | chr4_1:36042971-36042990 | Msa0545590:five_prime_UTR | 30.0% |
| AAGTGATTTGAAGAAGGAAA+AGG | - | chr4_1:36043166-36043185 | None:intergenic | 30.0% | |
| GAAAAGAAGTGATTTGAAGA+AGG | - | chr4_1:36043172-36043191 | None:intergenic | 30.0% | |
| !!! | TCCAATTTTGAGCTTTAGAA+GGG | - | chr4_1:36043524-36043543 | None:intergenic | 30.0% |
| !!! | ATCCAATTTTGAGCTTTAGA+AGG | - | chr4_1:36043525-36043544 | None:intergenic | 30.0% |
| !!! | ATTTTGGTTTGTGAAAGGTA+AGG | - | chr4_1:36043564-36043583 | None:intergenic | 30.0% |
| CATAATTCTCTTGTTAAGCT+TGG | + | chr4_1:36043669-36043688 | Msa0545590:CDS | 30.0% | |
| CTGTTGTAACAGTAATTACT+TGG | - | chr4_1:36043701-36043720 | None:intergenic | 30.0% | |
| GCATTATTTCAACCAAATGA+AGG | + | chr4_1:36043903-36043922 | Msa0545590:CDS | 30.0% | |
| ATTTCAACCAAATGAAGGTT+TGG | + | chr4_1:36043908-36043927 | Msa0545590:CDS | 30.0% | |
| GTATACCAATGTTGAAGTTA+AGG | + | chr4_1:36044013-36044032 | Msa0545590:CDS | 30.0% | |
| AGAAACCTTAACTTCAACAT+TGG | - | chr4_1:36044021-36044040 | None:intergenic | 30.0% | |
| AGAAGAATTGAGGAAAAACA+AGG | + | chr4_1:36044125-36044144 | Msa0545590:CDS | 30.0% | |
| TATACATCAATTGGAACCAA+TGG | - | chr4_1:36044164-36044183 | None:intergenic | 30.0% | |
| TATGGACTTTATTATCCTGA+TGG | + | chr4_1:36044239-36044258 | Msa0545590:CDS | 30.0% | |
| TTGCTTACATTAGATTTGGA+TGG | - | chr4_1:36044317-36044336 | None:intergenic | 30.0% | |
| !! | TGTGATTTGATTTGATGCAT+TGG | - | chr4_1:36044402-36044421 | None:intergenic | 30.0% |
| TTCAATCTTTCTTCTTATGC+AGG | + | chr4_1:36044611-36044630 | Msa0545590:intron | 30.0% | |
| TTTCAATGTTCTTGCATGTA+TGG | + | chr4_1:36044641-36044660 | Msa0545590:CDS | 30.0% | |
| ATGTTTGATCTTTGCTTTAG+AGG | + | chr4_1:36044668-36044687 | Msa0545590:CDS | 30.0% | |
| TATTTCTTAGATATACCACG+TGG | + | chr4_1:36044793-36044812 | Msa0545590:three_prime_UTR | 30.0% | |
| TATGAATACTGGATCTATAG+TGG | + | chr4_1:36044820-36044839 | Msa0545590:three_prime_UTR | 30.0% | |
| !! | AAACTCTAGTCTTGAAAACA+TGG | + | chr4_1:36042971-36042990 | Msa0545590:five_prime_UTR | 30.0% |
| AAGTGATTTGAAGAAGGAAA+AGG | - | chr4_1:36043166-36043185 | None:intergenic | 30.0% | |
| GAAAAGAAGTGATTTGAAGA+AGG | - | chr4_1:36043172-36043191 | None:intergenic | 30.0% | |
| !!! | TCCAATTTTGAGCTTTAGAA+GGG | - | chr4_1:36043524-36043543 | None:intergenic | 30.0% |
| !!! | ATCCAATTTTGAGCTTTAGA+AGG | - | chr4_1:36043525-36043544 | None:intergenic | 30.0% |
| !!! | ATTTTGGTTTGTGAAAGGTA+AGG | - | chr4_1:36043564-36043583 | None:intergenic | 30.0% |
| CATAATTCTCTTGTTAAGCT+TGG | + | chr4_1:36043669-36043688 | Msa0545590:CDS | 30.0% | |
| CTGTTGTAACAGTAATTACT+TGG | - | chr4_1:36043701-36043720 | None:intergenic | 30.0% | |
| GCATTATTTCAACCAAATGA+AGG | + | chr4_1:36043903-36043922 | Msa0545590:CDS | 30.0% | |
| ATTTCAACCAAATGAAGGTT+TGG | + | chr4_1:36043908-36043927 | Msa0545590:CDS | 30.0% | |
| GTATACCAATGTTGAAGTTA+AGG | + | chr4_1:36044013-36044032 | Msa0545590:CDS | 30.0% | |
| AGAAACCTTAACTTCAACAT+TGG | - | chr4_1:36044021-36044040 | None:intergenic | 30.0% | |
| AGAAGAATTGAGGAAAAACA+AGG | + | chr4_1:36044125-36044144 | Msa0545590:CDS | 30.0% | |
| TATACATCAATTGGAACCAA+TGG | - | chr4_1:36044164-36044183 | None:intergenic | 30.0% | |
| TATGGACTTTATTATCCTGA+TGG | + | chr4_1:36044239-36044258 | Msa0545590:CDS | 30.0% | |
| TTGCTTACATTAGATTTGGA+TGG | - | chr4_1:36044317-36044336 | None:intergenic | 30.0% | |
| !! | TGTGATTTGATTTGATGCAT+TGG | - | chr4_1:36044402-36044421 | None:intergenic | 30.0% |
| TTCAATCTTTCTTCTTATGC+AGG | + | chr4_1:36044611-36044630 | Msa0545590:intron | 30.0% | |
| TTTCAATGTTCTTGCATGTA+TGG | + | chr4_1:36044641-36044660 | Msa0545590:CDS | 30.0% | |
| ATGTTTGATCTTTGCTTTAG+AGG | + | chr4_1:36044668-36044687 | Msa0545590:CDS | 30.0% | |
| TATTTCTTAGATATACCACG+TGG | + | chr4_1:36044793-36044812 | Msa0545590:three_prime_UTR | 30.0% | |
| TATGAATACTGGATCTATAG+TGG | + | chr4_1:36044820-36044839 | Msa0545590:three_prime_UTR | 30.0% | |
| !! | TCTAGTCTTGAAAACATGGT+TGG | + | chr4_1:36042975-36042994 | Msa0545590:five_prime_UTR | 35.0% |
| ATACTTTAATGAGGAGGAAG+AGG | - | chr4_1:36043010-36043029 | None:intergenic | 35.0% | |
| GGATTAATAATGTGTGAGTG+TGG | - | chr4_1:36043064-36043083 | None:intergenic | 35.0% | |
| TTCTTTCTTCTCACCATATC+AGG | + | chr4_1:36043189-36043208 | Msa0545590:CDS | 35.0% | |
| ! | CAAATCAATGGCCTAAGTTT+TGG | + | chr4_1:36043312-36043331 | Msa0545590:CDS | 35.0% |
| TCTTGAATGAGATGGTAGAT+TGG | - | chr4_1:36043361-36043380 | None:intergenic | 35.0% | |
| GAGAAAGCAAGTAGAACATT+TGG | - | chr4_1:36043441-36043460 | None:intergenic | 35.0% | |
| !! | ACCCTTCTAAAGCTCAAAAT+TGG | + | chr4_1:36043520-36043539 | Msa0545590:CDS | 35.0% |
| CAAATCTGACCTAAAAGAAC+CGG | - | chr4_1:36043766-36043785 | None:intergenic | 35.0% | |
| TATGCTGCAATCAAAGTGAT+AGG | + | chr4_1:36043990-36044009 | Msa0545590:CDS | 35.0% | |
| ATGCTGCAATCAAAGTGATA+GGG | + | chr4_1:36043991-36044010 | Msa0545590:CDS | 35.0% | |
| ! | TTATAAACTGGTCTACCATC+AGG | - | chr4_1:36044257-36044276 | None:intergenic | 35.0% |
| GGTAGACCAGTTTATAACAT+TGG | + | chr4_1:36044260-36044279 | Msa0545590:CDS | 35.0% | |
| !! | TCTAGTCTTGAAAACATGGT+TGG | + | chr4_1:36042975-36042994 | Msa0545590:five_prime_UTR | 35.0% |
| ATACTTTAATGAGGAGGAAG+AGG | - | chr4_1:36043010-36043029 | None:intergenic | 35.0% | |
| GGATTAATAATGTGTGAGTG+TGG | - | chr4_1:36043064-36043083 | None:intergenic | 35.0% | |
| TTCTTTCTTCTCACCATATC+AGG | + | chr4_1:36043189-36043208 | Msa0545590:CDS | 35.0% | |
| ! | CAAATCAATGGCCTAAGTTT+TGG | + | chr4_1:36043312-36043331 | Msa0545590:CDS | 35.0% |
| TCTTGAATGAGATGGTAGAT+TGG | - | chr4_1:36043361-36043380 | None:intergenic | 35.0% | |
| GAGAAAGCAAGTAGAACATT+TGG | - | chr4_1:36043441-36043460 | None:intergenic | 35.0% | |
| !! | ACCCTTCTAAAGCTCAAAAT+TGG | + | chr4_1:36043520-36043539 | Msa0545590:CDS | 35.0% |
| CAAATCTGACCTAAAAGAAC+CGG | - | chr4_1:36043766-36043785 | None:intergenic | 35.0% | |
| TATGCTGCAATCAAAGTGAT+AGG | + | chr4_1:36043990-36044009 | Msa0545590:CDS | 35.0% | |
| ATGCTGCAATCAAAGTGATA+GGG | + | chr4_1:36043991-36044010 | Msa0545590:CDS | 35.0% | |
| ! | TTATAAACTGGTCTACCATC+AGG | - | chr4_1:36044257-36044276 | None:intergenic | 35.0% |
| GGTAGACCAGTTTATAACAT+TGG | + | chr4_1:36044260-36044279 | Msa0545590:CDS | 35.0% | |
| TTTAATGAGGAGGAAGAGGA+GGG | - | chr4_1:36043006-36043025 | None:intergenic | 40.0% | |
| AAAGTGAGGTGATGCAAAGT+TGG | - | chr4_1:36043085-36043104 | None:intergenic | 40.0% | |
| ATATCTAGGCACAGAAAGTG+AGG | - | chr4_1:36043099-36043118 | None:intergenic | 40.0% | |
| ACTGCAACTCTTGAATGAGA+TGG | - | chr4_1:36043369-36043388 | None:intergenic | 40.0% | |
| GGATCAACCAAACCTTCATT+TGG | - | chr4_1:36043918-36043937 | None:intergenic | 40.0% | |
| !! | GAAGTTAAGGTTTCTGAGAC+AGG | + | chr4_1:36044026-36044045 | Msa0545590:CDS | 40.0% |
| !! | TTAAGGTTTCTGAGACAGGT+TGG | + | chr4_1:36044030-36044049 | Msa0545590:CDS | 40.0% |
| TGGTGTAGCACCAATTTCAT+CGG | - | chr4_1:36044072-36044091 | None:intergenic | 40.0% | |
| ! | ATTGGAACCAATGGATTTCC+AGG | - | chr4_1:36044155-36044174 | None:intergenic | 40.0% |
| !! | CCATAGTTTCTTTCTGAAGC+AGG | - | chr4_1:36044224-36044243 | None:intergenic | 40.0% |
| CCTGCTTCAGAAAGAAACTA+TGG | + | chr4_1:36044221-36044240 | Msa0545590:CDS | 40.0% | |
| ACAGGGTTATCTACCACAAA+TGG | + | chr4_1:36044286-36044305 | Msa0545590:CDS | 40.0% | |
| !! | TGATCTTTGCTTTAGAGGTG+AGG | + | chr4_1:36044673-36044692 | Msa0545590:CDS | 40.0% |
| !! | GATCTTTGCTTTAGAGGTGA+GGG | + | chr4_1:36044674-36044693 | Msa0545590:CDS | 40.0% |
| GAGGTGAGGGAATATTCAAA+TGG | + | chr4_1:36044687-36044706 | Msa0545590:CDS | 40.0% | |
| !! | TTCCTTGCAATTTTTGGGCA+AGG | + | chr4_1:36044741-36044760 | Msa0545590:three_prime_UTR | 40.0% |
| CAGTATTCATATGATCCACG+TGG | - | chr4_1:36044811-36044830 | None:intergenic | 40.0% | |
| CACGTGGATCATATGAATAC+TGG | + | chr4_1:36044809-36044828 | Msa0545590:three_prime_UTR | 40.0% | |
| TTTAATGAGGAGGAAGAGGA+GGG | - | chr4_1:36043006-36043025 | None:intergenic | 40.0% | |
| AAAGTGAGGTGATGCAAAGT+TGG | - | chr4_1:36043085-36043104 | None:intergenic | 40.0% | |
| ATATCTAGGCACAGAAAGTG+AGG | - | chr4_1:36043099-36043118 | None:intergenic | 40.0% | |
| ACTGCAACTCTTGAATGAGA+TGG | - | chr4_1:36043369-36043388 | None:intergenic | 40.0% | |
| GGATCAACCAAACCTTCATT+TGG | - | chr4_1:36043918-36043937 | None:intergenic | 40.0% | |
| !! | GAAGTTAAGGTTTCTGAGAC+AGG | + | chr4_1:36044026-36044045 | Msa0545590:CDS | 40.0% |
| !! | TTAAGGTTTCTGAGACAGGT+TGG | + | chr4_1:36044030-36044049 | Msa0545590:CDS | 40.0% |
| TGGTGTAGCACCAATTTCAT+CGG | - | chr4_1:36044072-36044091 | None:intergenic | 40.0% | |
| ! | ATTGGAACCAATGGATTTCC+AGG | - | chr4_1:36044155-36044174 | None:intergenic | 40.0% |
| !! | CCATAGTTTCTTTCTGAAGC+AGG | - | chr4_1:36044224-36044243 | None:intergenic | 40.0% |
| CCTGCTTCAGAAAGAAACTA+TGG | + | chr4_1:36044221-36044240 | Msa0545590:CDS | 40.0% | |
| ACAGGGTTATCTACCACAAA+TGG | + | chr4_1:36044286-36044305 | Msa0545590:CDS | 40.0% | |
| !! | TGATCTTTGCTTTAGAGGTG+AGG | + | chr4_1:36044673-36044692 | Msa0545590:CDS | 40.0% |
| !! | GATCTTTGCTTTAGAGGTGA+GGG | + | chr4_1:36044674-36044693 | Msa0545590:CDS | 40.0% |
| GAGGTGAGGGAATATTCAAA+TGG | + | chr4_1:36044687-36044706 | Msa0545590:CDS | 40.0% | |
| !! | TTCCTTGCAATTTTTGGGCA+AGG | + | chr4_1:36044741-36044760 | Msa0545590:three_prime_UTR | 40.0% |
| CAGTATTCATATGATCCACG+TGG | - | chr4_1:36044811-36044830 | None:intergenic | 40.0% | |
| CACGTGGATCATATGAATAC+TGG | + | chr4_1:36044809-36044828 | Msa0545590:three_prime_UTR | 40.0% | |
| TTAATGAGGAGGAAGAGGAG+GGG | - | chr4_1:36043005-36043024 | None:intergenic | 45.0% | |
| CTTTAATGAGGAGGAAGAGG+AGG | - | chr4_1:36043007-36043026 | None:intergenic | 45.0% | |
| AATGTGTGAGTGTGGCATCA+TGG | - | chr4_1:36043056-36043075 | None:intergenic | 45.0% | |
| AATTCTTACCCTCCTTCGTC+CGG | + | chr4_1:36043744-36043763 | Msa0545590:CDS | 45.0% | |
| TAAAAGAACCGGACGAAGGA+GGG | - | chr4_1:36043755-36043774 | None:intergenic | 45.0% | |
| GAGGAAAAACAAGGAACTCC+TGG | + | chr4_1:36044134-36044153 | Msa0545590:CDS | 45.0% | |
| AGGAACTCCTGGAAATCCAT+TGG | + | chr4_1:36044145-36044164 | Msa0545590:CDS | 45.0% | |
| !! | TTTCTTTCTGAAGCAGGACC+AGG | - | chr4_1:36044218-36044237 | None:intergenic | 45.0% |
| TTGGATGGCACAACCATTTG+TGG | - | chr4_1:36044302-36044321 | None:intergenic | 45.0% | |
| CACCTTGCCCAAAAATTGCA+AGG | - | chr4_1:36044746-36044765 | None:intergenic | 45.0% | |
| TTAATGAGGAGGAAGAGGAG+GGG | - | chr4_1:36043005-36043024 | None:intergenic | 45.0% | |
| CTTTAATGAGGAGGAAGAGG+AGG | - | chr4_1:36043007-36043026 | None:intergenic | 45.0% | |
| AATGTGTGAGTGTGGCATCA+TGG | - | chr4_1:36043056-36043075 | None:intergenic | 45.0% | |
| AATTCTTACCCTCCTTCGTC+CGG | + | chr4_1:36043744-36043763 | Msa0545590:CDS | 45.0% | |
| TAAAAGAACCGGACGAAGGA+GGG | - | chr4_1:36043755-36043774 | None:intergenic | 45.0% | |
| GAGGAAAAACAAGGAACTCC+TGG | + | chr4_1:36044134-36044153 | Msa0545590:CDS | 45.0% | |
| AGGAACTCCTGGAAATCCAT+TGG | + | chr4_1:36044145-36044164 | Msa0545590:CDS | 45.0% | |
| !! | TTTCTTTCTGAAGCAGGACC+AGG | - | chr4_1:36044218-36044237 | None:intergenic | 45.0% |
| TTGGATGGCACAACCATTTG+TGG | - | chr4_1:36044302-36044321 | None:intergenic | 45.0% | |
| CACCTTGCCCAAAAATTGCA+AGG | - | chr4_1:36044746-36044765 | None:intergenic | 45.0% | |
| !!! | TATTATTTTTTATTTATGTT+TGG | + | chr4_1:36044529-36044548 | Msa0545590:intron | 5.0% |
| !!! | TATTATTTTTTATTTATGTT+TGG | + | chr4_1:36044529-36044548 | Msa0545590:intron | 5.0% |
| CTAAAAGAACCGGACGAAGG+AGG | - | chr4_1:36043756-36043775 | None:intergenic | 50.0% | |
| ! | CTCCTTCGTCCGGTTCTTTT+AGG | + | chr4_1:36043754-36043773 | Msa0545590:CDS | 50.0% |
| GACCTAAAAGAACCGGACGA+AGG | - | chr4_1:36043759-36043778 | None:intergenic | 50.0% | |
| !! | GAGACAGGTTGGCCTTCAAA+TGG | + | chr4_1:36044041-36044060 | Msa0545590:CDS | 50.0% |
| AATGGCGACGCCGATGAAAT+TGG | + | chr4_1:36044059-36044078 | Msa0545590:CDS | 50.0% | |
| CTAAAAGAACCGGACGAAGG+AGG | - | chr4_1:36043756-36043775 | None:intergenic | 50.0% | |
| ! | CTCCTTCGTCCGGTTCTTTT+AGG | + | chr4_1:36043754-36043773 | Msa0545590:CDS | 50.0% |
| GACCTAAAAGAACCGGACGA+AGG | - | chr4_1:36043759-36043778 | None:intergenic | 50.0% | |
| !! | GAGACAGGTTGGCCTTCAAA+TGG | + | chr4_1:36044041-36044060 | Msa0545590:CDS | 50.0% |
| AATGGCGACGCCGATGAAAT+TGG | + | chr4_1:36044059-36044078 | Msa0545590:CDS | 50.0% | |
| TCATCGGCGTCGCCATTTGA+AGG | - | chr4_1:36044056-36044075 | None:intergenic | 55.0% | |
| TCATCGGCGTCGCCATTTGA+AGG | - | chr4_1:36044056-36044075 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 36042914 | 36044873 | 36042914 | ID=Msa0545590;Name=Msa0545590 |
| chr4_1 | mRNA | 36042914 | 36044873 | 36042914 | ID=Msa0545590-mRNA-1;Parent=Msa0545590;Name=Msa0545590-mRNA-1;_AED=0.03;_eAED=0.03;_QI=242|1|1|1|1|0.66|3|157|388 |
| chr4_1 | exon | 36042914 | 36043210 | 36042914 | ID=Msa0545590-mRNA-1:exon:9121;Parent=Msa0545590-mRNA-1 |
| chr4_1 | exon | 36043301 | 36044328 | 36043301 | ID=Msa0545590-mRNA-1:exon:9122;Parent=Msa0545590-mRNA-1 |
| chr4_1 | exon | 36044633 | 36044873 | 36044633 | ID=Msa0545590-mRNA-1:exon:9123;Parent=Msa0545590-mRNA-1 |
| chr4_1 | five_prime_UTR | 36042914 | 36043155 | 36042914 | ID=Msa0545590-mRNA-1:five_prime_utr;Parent=Msa0545590-mRNA-1 |
| chr4_1 | CDS | 36043156 | 36043210 | 36043156 | ID=Msa0545590-mRNA-1:cds;Parent=Msa0545590-mRNA-1 |
| chr4_1 | CDS | 36043301 | 36044328 | 36043301 | ID=Msa0545590-mRNA-1:cds;Parent=Msa0545590-mRNA-1 |
| chr4_1 | CDS | 36044633 | 36044716 | 36044633 | ID=Msa0545590-mRNA-1:cds;Parent=Msa0545590-mRNA-1 |
| chr4_1 | three_prime_UTR | 36044717 | 36044873 | 36044717 | ID=Msa0545590-mRNA-1:three_prime_utr;Parent=Msa0545590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
