Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680300 | XP_013455825.1 | 97.128 | 383 | 11 | 0 | 1 | 383 | 1 | 383 | 0.0 | 761 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680300 | sp|Q9ZQG9|E1314_ARATH | 62.011 | 358 | 135 | 1 | 22 | 378 | 22 | 379 | 6.87e-172 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680300 | A0A072UKG4 | 97.128 | 383 | 11 | 0 | 1 | 383 | 1 | 383 | 0.0 | 761 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0680300 | 0.800651 | 1.304394e-48 | -8.615850e-47 |
| Msa0008850 | Msa0680300 | 0.820232 | 7.648768e-53 | -8.615850e-47 |
| Msa0017120 | Msa0680300 | 0.835359 | 1.757255e-56 | -8.615850e-47 |
| Msa0038310 | Msa0680300 | 0.832037 | 1.187865e-55 | -8.615850e-47 |
| Msa0047470 | Msa0680300 | 0.801606 | 8.316155e-49 | -8.615850e-47 |
| Msa0055280 | Msa0680300 | 0.806664 | 7.370825e-50 | -8.615850e-47 |
| Msa0056040 | Msa0680300 | 0.833876 | 4.144209e-56 | -8.615850e-47 |
| Msa0065390 | Msa0680300 | 0.807541 | 4.807125e-50 | -8.615850e-47 |
| Msa0086090 | Msa0680300 | 0.826560 | 2.537147e-54 | -8.615850e-47 |
| Msa0089210 | Msa0680300 | 0.817524 | 3.153456e-52 | -8.615850e-47 |
| Msa0094420 | Msa0680300 | 0.830155 | 3.443494e-55 | -8.615850e-47 |
| Msa0102410 | Msa0680300 | 0.804483 | 2.114128e-49 | -8.615850e-47 |
| Msa0103060 | Msa0680300 | 0.811468 | 6.898084e-51 | -8.615850e-47 |
| Msa0103780 | Msa0680300 | 0.809852 | 1.541970e-50 | -8.615850e-47 |
| Msa0110710 | Msa0680300 | 0.807313 | 5.371569e-50 | -8.615850e-47 |
| Msa0114250 | Msa0680300 | 0.807981 | 3.874596e-50 | -8.615850e-47 |
| Msa0606060 | Msa0680300 | 0.830029 | 3.696789e-55 | -8.615850e-47 |
| Msa0607280 | Msa0680300 | 0.813286 | 2.763924e-51 | -8.615850e-47 |
| Msa0617370 | Msa0680300 | 0.802045 | 6.757223e-49 | -8.615850e-47 |
| Msa0619330 | Msa0680300 | 0.822096 | 2.843743e-53 | -8.615850e-47 |
| Msa0620640 | Msa0680300 | 0.809710 | 1.653821e-50 | -8.615850e-47 |
| Msa0622390 | Msa0680300 | 0.809716 | 1.649151e-50 | -8.615850e-47 |
| Msa0635350 | Msa0680300 | 0.805016 | 1.635953e-49 | -8.615850e-47 |
| Msa0640880 | Msa0680300 | 0.824758 | 6.784827e-54 | -8.615850e-47 |
| Msa0647000 | Msa0680300 | 0.805993 | 1.020906e-49 | -8.615850e-47 |
| Msa0650650 | Msa0680300 | 0.808895 | 2.473482e-50 | -8.615850e-47 |
| Msa0650740 | Msa0680300 | 0.800597 | 1.337584e-48 | -8.615850e-47 |
| Msa0656040 | Msa0680300 | 0.822569 | 2.208723e-53 | -8.615850e-47 |
| Msa0659040 | Msa0680300 | 0.811928 | 5.477267e-51 | -8.615850e-47 |
| Msa0660410 | Msa0680300 | 0.812793 | 3.545470e-51 | -8.615850e-47 |
| Msa0674220 | Msa0680300 | 0.816775 | 4.648089e-52 | -8.615850e-47 |
| Msa0674300 | Msa0680300 | 0.811530 | 6.685885e-51 | -8.615850e-47 |
| Msa0680300 | Msa0681890 | 0.834818 | 2.404707e-56 | -8.615850e-47 |
| Msa0680300 | Msa0686610 | 0.832378 | 9.783873e-56 | -8.615850e-47 |
| Msa0680300 | Msa0690350 | 0.817933 | 2.550547e-52 | -8.615850e-47 |
| Msa0680300 | Msa0690720 | 0.834289 | 3.265796e-56 | -8.615850e-47 |
| Msa0680300 | Msa0704990 | 0.811806 | 5.821646e-51 | -8.615850e-47 |
| Msa0680300 | Msa0707780 | 0.813039 | 3.131682e-51 | -8.615850e-47 |
| Msa0680300 | Msa0714020 | 0.823082 | 1.676865e-53 | -8.615850e-47 |
| Msa0680300 | Msa0714160 | 0.819286 | 1.257563e-52 | -8.615850e-47 |
| Msa0680300 | Msa0717270 | 0.806116 | 9.614520e-50 | -8.615850e-47 |
| Msa0680300 | Msa0719340 | 0.845025 | 5.253488e-59 | -8.615850e-47 |
| Msa0680300 | Msa0726610 | 0.832685 | 8.208832e-56 | -8.615850e-47 |
| Msa0680300 | Msa0730180 | 0.803939 | 2.744000e-49 | -8.615850e-47 |
| Msa0680300 | Msa0733000 | 0.819312 | 1.240783e-52 | -8.615850e-47 |
| Msa0680300 | Msa0739570 | 0.822323 | 2.519632e-53 | -8.615850e-47 |
| Msa0680300 | Msa0740420 | 0.825390 | 4.811457e-54 | -8.615850e-47 |
| Msa0680300 | Msa0744450 | 0.805430 | 1.339802e-49 | -8.615850e-47 |
| Msa0680300 | Msa0756480 | 0.800965 | 1.124947e-48 | -8.615850e-47 |
| Msa0680300 | Msa0770430 | 0.829605 | 4.688467e-55 | -8.615850e-47 |
| Msa0680300 | Msa0771960 | 0.812720 | 3.677818e-51 | -8.615850e-47 |
| Msa0680300 | Msa0772150 | 0.843957 | 1.017887e-58 | -8.615850e-47 |
| Msa0680300 | Msa0772210 | 0.805698 | 1.177255e-49 | -8.615850e-47 |
| Msa0680300 | Msa0792510 | 0.803959 | 2.717286e-49 | -8.615850e-47 |
| Msa0680300 | Msa0796450 | 0.807261 | 5.510330e-50 | -8.615850e-47 |
| Msa0680300 | Msa0799710 | 0.824086 | 9.763565e-54 | -8.615850e-47 |
| Msa0680300 | Msa0804930 | 0.817184 | 3.760766e-52 | -8.615850e-47 |
| Msa0680300 | Msa0811510 | 0.834140 | 3.559906e-56 | -8.615850e-47 |
| Msa0680300 | Msa0820670 | 0.819450 | 1.154330e-52 | -8.615850e-47 |
| Msa0680300 | Msa0833940 | 0.806136 | 9.525576e-50 | -8.615850e-47 |
| Msa0680300 | Msa0835510 | 0.816884 | 4.393252e-52 | -8.615850e-47 |
| Msa0680300 | Msa0837990 | 0.829944 | 3.876177e-55 | -8.615850e-47 |
| Msa0680300 | Msa0851740 | 0.838524 | 2.731873e-57 | -8.615850e-47 |
| Msa0680300 | Msa0860270 | 0.805115 | 1.560154e-49 | -8.615850e-47 |
| Msa0680300 | Msa0864950 | 0.810748 | 9.879067e-51 | -8.615850e-47 |
| Msa0680300 | Msa0880230 | 0.822038 | 2.933806e-53 | -8.615850e-47 |
| Msa0680300 | Msa0903730 | 0.813643 | 2.307289e-51 | -8.615850e-47 |
| Msa0680300 | Msa0922540 | 0.822397 | 2.421395e-53 | -8.615850e-47 |
| Msa0680300 | Msa0955310 | 0.808947 | 2.410495e-50 | -8.615850e-47 |
| Msa0680300 | Msa0958020 | 0.840047 | 1.100339e-57 | -8.615850e-47 |
| Msa0680300 | Msa0971860 | 0.822295 | 2.557629e-53 | -8.615850e-47 |
| Msa0680300 | Msa0978000 | 0.808265 | 3.371853e-50 | -8.615850e-47 |
| Msa0680300 | Msa0990520 | 0.800798 | 1.217012e-48 | -8.615850e-47 |
| Msa0680300 | Msa0996090 | 0.822492 | 2.301776e-53 | -8.615850e-47 |
| Msa0680300 | Msa1002040 | 0.805634 | 1.214432e-49 | -8.615850e-47 |
| Msa0680300 | Msa1014350 | 0.818011 | 2.448690e-52 | -8.615850e-47 |
| Msa0680300 | Msa1024140 | 0.824516 | 7.735651e-54 | -8.615850e-47 |
| Msa0680300 | Msa1027790 | 0.805458 | 1.322127e-49 | -8.615850e-47 |
| Msa0680300 | Msa1028210 | 0.818556 | 1.843071e-52 | -8.615850e-47 |
| Msa0680300 | Msa1033160 | 0.814595 | 1.422459e-51 | -8.615850e-47 |
| Msa0680300 | Msa1036350 | 0.821135 | 4.741561e-53 | -8.615850e-47 |
| Msa0680300 | Msa1040770 | 0.807338 | 5.307492e-50 | -8.615850e-47 |
| Msa0680300 | Msa1044040 | 0.844659 | 6.593168e-59 | -8.615850e-47 |
| Msa0680300 | Msa1055360 | 0.805988 | 1.023266e-49 | -8.615850e-47 |
| Msa0680300 | Msa1061180 | 0.801062 | 1.075098e-48 | -8.615850e-47 |
| Msa0680300 | Msa1067910 | 0.801985 | 6.952667e-49 | -8.615850e-47 |
| Msa0680300 | Msa1076630 | 0.821480 | 3.948978e-53 | -8.615850e-47 |
| Msa0680300 | Msa1079610 | 0.827046 | 1.942224e-54 | -8.615850e-47 |
| Msa0680300 | Msa1107970 | 0.805477 | 1.310010e-49 | -8.615850e-47 |
| Msa0680300 | Msa1112610 | 0.817971 | 2.499627e-52 | -8.615850e-47 |
| Msa0680300 | Msa1115580 | 0.822831 | 1.919579e-53 | -8.615850e-47 |
| Msa0680300 | Msa1122510 | 0.825547 | 4.416924e-54 | -8.615850e-47 |
| Msa0680300 | Msa1133660 | 0.820434 | 6.873607e-53 | -8.615850e-47 |
| Msa0680300 | Msa1149760 | 0.827125 | 1.858981e-54 | -8.615850e-47 |
| Msa0680300 | Msa1157160 | 0.830973 | 2.171226e-55 | -8.615850e-47 |
| Msa0680300 | Msa1161160 | 0.821539 | 3.826464e-53 | -8.615850e-47 |
| Msa0680300 | Msa1166180 | 0.803073 | 4.148409e-49 | -8.615850e-47 |
| Msa0680300 | Msa1168130 | 0.807025 | 6.183113e-50 | -8.615850e-47 |
| Msa0680300 | Msa1182830 | 0.803960 | 2.715932e-49 | -8.615850e-47 |
| Msa0680300 | Msa1186210 | 0.825242 | 5.216047e-54 | -8.615850e-47 |
| Msa0680300 | Msa1200920 | 0.813099 | 3.038068e-51 | -8.615850e-47 |
| Msa0680300 | Msa1214900 | 0.807903 | 4.027217e-50 | -8.615850e-47 |
| Msa0680300 | Msa1220450 | -0.800356 | 1.497716e-48 | -8.615850e-47 |
| Msa0680300 | Msa1220460 | -0.800595 | 1.338646e-48 | -8.615850e-47 |
| Msa0680300 | Msa1220480 | -0.800356 | 1.497716e-48 | -8.615850e-47 |
| Msa0680300 | Msa1220740 | 0.812480 | 4.151567e-51 | -8.615850e-47 |
| Msa0680300 | Msa1221260 | 0.816732 | 4.752127e-52 | -8.615850e-47 |
| Msa0680300 | Msa1226360 | 0.826116 | 3.236435e-54 | -8.615850e-47 |
| Msa0680300 | Msa1226600 | 0.829534 | 4.878699e-55 | -8.615850e-47 |
| Msa0680300 | Msa1263030 | 0.819970 | 8.777671e-53 | -8.615850e-47 |
| Msa0680300 | Msa1284030 | 0.822091 | 2.851680e-53 | -8.615850e-47 |
| Msa0680300 | Msa1302150 | 0.823828 | 1.122662e-53 | -8.615850e-47 |
| Msa0680300 | Msa1306590 | 0.824124 | 9.566771e-54 | -8.615850e-47 |
| Msa0680300 | Msa1309100 | 0.806695 | 7.261392e-50 | -8.615850e-47 |
| Msa0680300 | Msa1323060 | 0.813957 | 1.967251e-51 | -8.615850e-47 |
| Msa0680300 | Msa1325980 | 0.825094 | 5.653233e-54 | -8.615850e-47 |
| Msa0680300 | Msa1326000 | 0.808747 | 2.659919e-50 | -8.615850e-47 |
| Msa0680300 | Msa1327820 | 0.825601 | 4.289559e-54 | -8.615850e-47 |
| Msa0680300 | Msa1334650 | 0.812771 | 3.584137e-51 | -8.615850e-47 |
| Msa0680300 | Msa1337340 | 0.807503 | 4.896333e-50 | -8.615850e-47 |
| Msa0680300 | Msa1349360 | 0.825963 | 3.518660e-54 | -8.615850e-47 |
| Msa0680300 | Msa1355260 | 0.839334 | 1.686077e-57 | -8.615850e-47 |
| Msa0680300 | Msa1355860 | 0.801644 | 8.171488e-49 | -8.615850e-47 |
| Msa0680300 | Msa1367940 | 0.806428 | 8.263991e-50 | -8.615850e-47 |
| Msa0680300 | Msa1373910 | 0.825230 | 5.250520e-54 | -8.615850e-47 |
| Msa0680300 | Msa1373950 | 0.806445 | 8.196048e-50 | -8.615850e-47 |
| Msa0680300 | Msa1375330 | 0.827059 | 1.928500e-54 | -8.615850e-47 |
| Msa0680300 | Msa1379070 | 0.800310 | 1.530248e-48 | -8.615850e-47 |
| Msa0680300 | Msa1379090 | 0.800350 | 1.502002e-48 | -8.615850e-47 |
| Msa0680300 | Msa1379980 | 0.842130 | 3.119569e-58 | -8.615850e-47 |
| Msa0680300 | Msa1381130 | 0.812290 | 4.567242e-51 | -8.615850e-47 |
| Msa0680300 | Msa1386020 | 0.805392 | 1.365177e-49 | -8.615850e-47 |
| Msa0680300 | Msa1388230 | 0.823008 | 1.745040e-53 | -8.615850e-47 |
| Msa0680300 | Msa1388850 | 0.810193 | 1.302155e-50 | -8.615850e-47 |
| Msa0680300 | Msa1392680 | 0.814228 | 1.714467e-51 | -8.615850e-47 |
| Msa0680300 | Msa1395570 | 0.804829 | 1.790136e-49 | -8.615850e-47 |
| Msa0680300 | Msa1397540 | 0.832492 | 9.167265e-56 | -8.615850e-47 |
| Msa0680300 | Msa1405770 | 0.807458 | 5.004912e-50 | -8.615850e-47 |
| Msa0680300 | Msa1418200 | 0.802483 | 5.491471e-49 | -8.615850e-47 |
| Msa0680300 | Msa1429830 | 0.810954 | 8.913602e-51 | -8.615850e-47 |
| Msa0680300 | Msa1432470 | 0.808448 | 3.081230e-50 | -8.615850e-47 |
| Msa0680300 | Msa1435470 | 0.808946 | 2.412015e-50 | -8.615850e-47 |
| Msa0680300 | Msa1435670 | 0.804551 | 2.045659e-49 | -8.615850e-47 |
| Msa0680300 | Msa1456810 | 0.809692 | 1.668608e-50 | -8.615850e-47 |
| Msa0132620 | Msa0680300 | 0.832739 | 7.958228e-56 | -8.615850e-47 |
| Msa0141550 | Msa0680300 | 0.832361 | 9.876782e-56 | -8.615850e-47 |
| Msa0141670 | Msa0680300 | 0.850207 | 1.971405e-60 | -8.615850e-47 |
| Msa0151690 | Msa0680300 | 0.809432 | 1.898056e-50 | -8.615850e-47 |
| Msa0157020 | Msa0680300 | 0.825341 | 4.942583e-54 | -8.615850e-47 |
| Msa0168390 | Msa0680300 | 0.826527 | 2.583218e-54 | -8.615850e-47 |
| Msa0185390 | Msa0680300 | 0.810602 | 1.062544e-50 | -8.615850e-47 |
| Msa0190000 | Msa0680300 | 0.820243 | 7.602748e-53 | -8.615850e-47 |
| Msa0208930 | Msa0680300 | 0.809453 | 1.878099e-50 | -8.615850e-47 |
| Msa0213080 | Msa0680300 | 0.817864 | 2.643434e-52 | -8.615850e-47 |
| Msa0217470 | Msa0680300 | 0.829695 | 4.457382e-55 | -8.615850e-47 |
| Msa0222070 | Msa0680300 | 0.800336 | 1.511980e-48 | -8.615850e-47 |
| Msa0222120 | Msa0680300 | 0.801539 | 8.586081e-49 | -8.615850e-47 |
| Msa0227500 | Msa0680300 | 0.819924 | 8.995656e-53 | -8.615850e-47 |
| Msa0367490 | Msa0680300 | 0.804782 | 1.830847e-49 | -8.615850e-47 |
| Msa0371610 | Msa0680300 | 0.861881 | 7.510829e-64 | -8.615850e-47 |
| Msa0380430 | Msa0680300 | 0.806106 | 9.665525e-50 | -8.615850e-47 |
| Msa0382560 | Msa0680300 | 0.828900 | 6.950332e-55 | -8.615850e-47 |
| Msa0411560 | Msa0680300 | 0.828469 | 8.838015e-55 | -8.615850e-47 |
| Msa0413740 | Msa0680300 | 0.833356 | 5.590065e-56 | -8.615850e-47 |
| Msa0420070 | Msa0680300 | 0.848063 | 7.779744e-60 | -8.615850e-47 |
| Msa0427050 | Msa0680300 | 0.811265 | 7.632786e-51 | -8.615850e-47 |
| Msa0436450 | Msa0680300 | 0.841932 | 3.519306e-58 | -8.615850e-47 |
| Msa0450460 | Msa0680300 | 0.808620 | 2.831517e-50 | -8.615850e-47 |
| Msa0458110 | Msa0680300 | 0.821447 | 4.019276e-53 | -8.615850e-47 |
| Msa0458790 | Msa0680300 | 0.807621 | 4.623152e-50 | -8.615850e-47 |
| Msa0463020 | Msa0680300 | 0.818189 | 2.231701e-52 | -8.615850e-47 |
| Msa0466100 | Msa0680300 | 0.808972 | 2.381084e-50 | -8.615850e-47 |
| Msa0473530 | Msa0680300 | 0.803652 | 3.147968e-49 | -8.615850e-47 |
| Msa0259330 | Msa0680300 | 0.807446 | 5.034592e-50 | -8.615850e-47 |
| Msa0263620 | Msa0680300 | 0.801045 | 1.083647e-48 | -8.615850e-47 |
| Msa0272420 | Msa0680300 | 0.804452 | 2.145336e-49 | -8.615850e-47 |
| Msa0284870 | Msa0680300 | 0.818733 | 1.680563e-52 | -8.615850e-47 |
| Msa0296610 | Msa0680300 | 0.812474 | 4.163762e-51 | -8.615850e-47 |
| Msa0301800 | Msa0680300 | 0.801069 | 1.071482e-48 | -8.615850e-47 |
| Msa0306130 | Msa0680300 | 0.808366 | 3.209015e-50 | -8.615850e-47 |
| Msa0320540 | Msa0680300 | 0.809032 | 2.311624e-50 | -8.615850e-47 |
| Msa0323630 | Msa0680300 | 0.815103 | 1.097153e-51 | -8.615850e-47 |
| Msa0330270 | Msa0680300 | 0.815539 | 8.780136e-52 | -8.615850e-47 |
| Msa0331780 | Msa0680300 | 0.807664 | 4.526374e-50 | -8.615850e-47 |
| Msa0334980 | Msa0680300 | 0.820322 | 7.293923e-53 | -8.615850e-47 |
| Msa0336270 | Msa0680300 | 0.827008 | 1.982962e-54 | -8.615850e-47 |
| Msa0357380 | Msa0680300 | 0.826130 | 3.211384e-54 | -8.615850e-47 |
| Msa0357390 | Msa0680300 | 0.821786 | 3.354610e-53 | -8.615850e-47 |
| Msa0486530 | Msa0680300 | 0.814157 | 1.777596e-51 | -8.615850e-47 |
| Msa0490300 | Msa0680300 | 0.800078 | 1.706027e-48 | -8.615850e-47 |
| Msa0502500 | Msa0680300 | 0.805761 | 1.141897e-49 | -8.615850e-47 |
| Msa0505390 | Msa0680300 | 0.832299 | 1.023231e-55 | -8.615850e-47 |
| Msa0505660 | Msa0680300 | 0.832585 | 8.693836e-56 | -8.615850e-47 |
| Msa0511890 | Msa0680300 | 0.823627 | 1.251344e-53 | -8.615850e-47 |
| Msa0514990 | Msa0680300 | 0.815417 | 9.345310e-52 | -8.615850e-47 |
| Msa0517300 | Msa0680300 | 0.802354 | 5.838179e-49 | -8.615850e-47 |
| Msa0524050 | Msa0680300 | 0.806154 | 9.443106e-50 | -8.615850e-47 |
| Msa0524120 | Msa0680300 | 0.807314 | 5.369185e-50 | -8.615850e-47 |
| Msa0525240 | Msa0680300 | 0.838987 | 2.074848e-57 | -8.615850e-47 |
| Msa0530930 | Msa0680300 | 0.816663 | 4.923638e-52 | -8.615850e-47 |
| Msa0534890 | Msa0680300 | 0.804591 | 2.006808e-49 | -8.615850e-47 |
| Msa0542040 | Msa0680300 | 0.803982 | 2.688265e-49 | -8.615850e-47 |
| Msa0545590 | Msa0680300 | 0.842194 | 3.000826e-58 | -8.615850e-47 |
| Msa0546740 | Msa0680300 | 0.823599 | 1.269879e-53 | -8.615850e-47 |
| Msa0549740 | Msa0680300 | 0.800837 | 1.194848e-48 | -8.615850e-47 |
| Msa0553520 | Msa0680300 | 0.812793 | 3.544834e-51 | -8.615850e-47 |
| Msa0576420 | Msa0680300 | 0.814306 | 1.647711e-51 | -8.615850e-47 |
| Msa0577870 | Msa0680300 | 0.839970 | 1.151952e-57 | -8.615850e-47 |
| Msa0579340 | Msa0680300 | 0.805661 | 1.198478e-49 | -8.615850e-47 |
| Msa0581340 | Msa0680300 | 0.817598 | 3.035060e-52 | -8.615850e-47 |
| Msa0582110 | Msa0680300 | 0.800696 | 1.276571e-48 | -8.615850e-47 |
| Msa0594390 | Msa0680300 | 0.803955 | 2.722573e-49 | -8.615850e-47 |
| Msa0598250 | Msa0680300 | 0.831855 | 1.317812e-55 | -8.615850e-47 |
| Msa0600390 | Msa0680300 | 0.832507 | 9.090453e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680300 | MtrunA17_Chr4g0026321 | 97.128 | 383 | 11 | 0 | 1 | 383 | 1 | 383 | 0.0 | 761 |
| Msa0680300 | MtrunA17_Chr2g0321511 | 63.824 | 387 | 132 | 2 | 1 | 381 | 1 | 385 | 5.35e-180 | 505 |
| Msa0680300 | MtrunA17_Chr1g0189111 | 58.750 | 320 | 131 | 1 | 28 | 347 | 30 | 348 | 1.28e-139 | 404 |
| Msa0680300 | MtrunA17_Chr4g0043851 | 51.613 | 341 | 163 | 1 | 10 | 350 | 15 | 353 | 6.23e-129 | 376 |
| Msa0680300 | MtrunA17_Chr2g0285901 | 51.553 | 322 | 155 | 1 | 26 | 347 | 21 | 341 | 9.71e-123 | 360 |
| Msa0680300 | MtrunA17_Chr4g0003281 | 43.681 | 364 | 196 | 3 | 9 | 366 | 15 | 375 | 3.54e-110 | 328 |
| Msa0680300 | MtrunA17_Chr4g0064021 | 47.368 | 323 | 169 | 1 | 28 | 349 | 25 | 347 | 1.07e-108 | 324 |
| Msa0680300 | MtrunA17_Chr3g0119541 | 46.866 | 335 | 166 | 5 | 25 | 350 | 22 | 353 | 1.26e-98 | 297 |
| Msa0680300 | MtrunA17_Chr4g0034901 | 44.868 | 341 | 186 | 2 | 9 | 347 | 8 | 348 | 1.43e-97 | 298 |
| Msa0680300 | MtrunA17_Chr1g0146831 | 44.214 | 337 | 177 | 5 | 10 | 344 | 17 | 344 | 1.36e-95 | 290 |
| Msa0680300 | MtrunA17_Chr1g0177171 | 47.059 | 323 | 166 | 4 | 28 | 347 | 37 | 357 | 2.94e-95 | 293 |
| Msa0680300 | MtrunA17_Chr8g0389741 | 43.840 | 349 | 188 | 4 | 4 | 349 | 5 | 348 | 3.41e-95 | 293 |
| Msa0680300 | MtrunA17_Chr5g0439251 | 46.483 | 327 | 168 | 4 | 25 | 347 | 21 | 344 | 5.84e-95 | 292 |
| Msa0680300 | MtrunA17_Chr1g0155001 | 44.237 | 321 | 177 | 2 | 29 | 347 | 24 | 344 | 6.13e-95 | 290 |
| Msa0680300 | MtrunA17_Chr3g0144531 | 42.486 | 346 | 193 | 2 | 3 | 347 | 7 | 347 | 9.94e-95 | 291 |
| Msa0680300 | MtrunA17_Chr6g0487261 | 43.425 | 327 | 177 | 3 | 30 | 352 | 28 | 350 | 1.03e-89 | 279 |
| Msa0680300 | MtrunA17_Chr7g0234821 | 39.521 | 334 | 196 | 5 | 30 | 358 | 27 | 359 | 2.52e-86 | 269 |
| Msa0680300 | MtrunA17_Chr7g0223961 | 42.236 | 322 | 178 | 6 | 28 | 347 | 22 | 337 | 9.02e-84 | 262 |
| Msa0680300 | MtrunA17_Chr8g0339191 | 37.681 | 345 | 206 | 7 | 14 | 353 | 17 | 357 | 8.21e-79 | 250 |
| Msa0680300 | MtrunA17_Chr4g0046311 | 37.572 | 346 | 205 | 6 | 11 | 349 | 8 | 349 | 1.18e-78 | 249 |
| Msa0680300 | MtrunA17_Chr1g0161011 | 38.081 | 344 | 206 | 4 | 10 | 349 | 7 | 347 | 3.41e-78 | 249 |
| Msa0680300 | MtrunA17_Chr4g0043511 | 42.188 | 320 | 180 | 5 | 30 | 347 | 63 | 379 | 1.06e-76 | 247 |
| Msa0680300 | MtrunA17_Chr8g0378621 | 36.648 | 352 | 218 | 3 | 8 | 355 | 5 | 355 | 2.18e-75 | 242 |
| Msa0680300 | MtrunA17_Chr4g0039011 | 37.870 | 338 | 194 | 6 | 15 | 349 | 26 | 350 | 8.90e-74 | 234 |
| Msa0680300 | MtrunA17_Chr3g0110371 | 37.615 | 327 | 195 | 4 | 29 | 349 | 24 | 347 | 1.77e-72 | 234 |
| Msa0680300 | MtrunA17_Chr4g0075031 | 37.349 | 332 | 203 | 3 | 22 | 349 | 38 | 368 | 2.54e-72 | 234 |
| Msa0680300 | MtrunA17_Chr4g0038981 | 37.612 | 335 | 192 | 7 | 10 | 343 | 6 | 324 | 1.56e-71 | 227 |
| Msa0680300 | MtrunA17_Chr4g0038971 | 38.462 | 338 | 194 | 8 | 9 | 345 | 2 | 326 | 5.09e-70 | 223 |
| Msa0680300 | MtrunA17_Chr5g0434591 | 35.057 | 348 | 216 | 5 | 9 | 349 | 2 | 346 | 1.27e-69 | 227 |
| Msa0680300 | MtrunA17_Chr3g0121271 | 34.808 | 339 | 210 | 6 | 12 | 343 | 10 | 344 | 4.65e-69 | 225 |
| Msa0680300 | MtrunA17_Chr4g0038941 | 38.050 | 318 | 184 | 5 | 28 | 345 | 51 | 355 | 1.68e-68 | 220 |
| Msa0680300 | MtrunA17_Chr4g0039071 | 39.062 | 320 | 187 | 5 | 28 | 346 | 24 | 336 | 1.21e-67 | 218 |
| Msa0680300 | MtrunA17_Chr4g0038961 | 37.278 | 338 | 193 | 9 | 10 | 345 | 6 | 326 | 7.48e-67 | 215 |
| Msa0680300 | MtrunA17_Chr2g0294591 | 37.879 | 330 | 193 | 8 | 23 | 349 | 24 | 344 | 1.15e-64 | 210 |
| Msa0680300 | MtrunA17_Chr7g0250301 | 33.962 | 318 | 200 | 6 | 27 | 343 | 6 | 314 | 1.90e-63 | 206 |
| Msa0680300 | MtrunA17_Chr1g0174261 | 39.869 | 306 | 166 | 9 | 58 | 360 | 1 | 291 | 8.19e-63 | 205 |
| Msa0680300 | MtrunA17_Chr2g0294601 | 35.362 | 345 | 213 | 7 | 7 | 349 | 37 | 373 | 2.18e-62 | 205 |
| Msa0680300 | MtrunA17_Chr4g0039021 | 38.062 | 289 | 163 | 7 | 55 | 339 | 7 | 283 | 1.37e-58 | 192 |
| Msa0680300 | MtrunA17_Chr8g0383311 | 32.927 | 328 | 205 | 10 | 30 | 349 | 44 | 364 | 3.14e-55 | 189 |
| Msa0680300 | MtrunA17_Chr1g0148391 | 32.353 | 374 | 225 | 13 | 7 | 363 | 6 | 368 | 3.37e-51 | 178 |
| Msa0680300 | MtrunA17_Chr7g0250321 | 31.399 | 293 | 192 | 5 | 7 | 298 | 6 | 290 | 3.19e-49 | 168 |
| Msa0680300 | MtrunA17_Chr2g0290821 | 33.739 | 329 | 203 | 10 | 28 | 347 | 27 | 349 | 8.23e-48 | 169 |
| Msa0680300 | MtrunA17_Chr3g0138741 | 33.129 | 326 | 203 | 10 | 30 | 347 | 32 | 350 | 1.37e-47 | 169 |
| Msa0680300 | MtrunA17_Chr5g0436361 | 34.259 | 324 | 200 | 9 | 26 | 344 | 34 | 349 | 1.09e-46 | 164 |
| Msa0680300 | MtrunA17_Chr7g0253091 | 30.899 | 356 | 224 | 13 | 28 | 371 | 25 | 370 | 1.42e-46 | 166 |
| Msa0680300 | MtrunA17_Chr4g0069801 | 28.967 | 397 | 247 | 16 | 6 | 378 | 6 | 391 | 3.42e-46 | 165 |
| Msa0680300 | MtrunA17_Chr6g0461601 | 32.011 | 353 | 214 | 13 | 5 | 343 | 4 | 344 | 1.35e-45 | 163 |
| Msa0680300 | MtrunA17_Chr4g0062771 | 31.680 | 363 | 221 | 14 | 2 | 350 | 6 | 355 | 1.01e-43 | 158 |
| Msa0680300 | MtrunA17_Chr3g0129341 | 30.882 | 340 | 210 | 15 | 28 | 353 | 33 | 361 | 1.19e-43 | 158 |
| Msa0680300 | MtrunA17_Chr4g0076581 | 32.692 | 364 | 216 | 13 | 28 | 369 | 32 | 388 | 1.61e-43 | 157 |
| Msa0680300 | MtrunA17_Chr2g0306311 | 28.800 | 375 | 221 | 12 | 10 | 349 | 16 | 379 | 1.22e-40 | 150 |
| Msa0680300 | MtrunA17_Chr3g0105981 | 30.816 | 331 | 211 | 11 | 28 | 349 | 26 | 347 | 2.85e-39 | 145 |
| Msa0680300 | MtrunA17_Chr2g0294581 | 28.571 | 210 | 138 | 5 | 23 | 225 | 70 | 274 | 8.70e-19 | 85.9 |
| Msa0680300 | MtrunA17_Chr4g0018771 | 41.667 | 96 | 49 | 4 | 251 | 345 | 86 | 175 | 7.86e-15 | 73.2 |
| Msa0680300 | MtrunA17_Chr4g0018861 | 41.304 | 92 | 47 | 4 | 255 | 345 | 88 | 173 | 2.58e-14 | 71.6 |
| Msa0680300 | MtrunA17_Chr4g0018861 | 37.349 | 83 | 52 | 0 | 10 | 92 | 3 | 85 | 7.98e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0680300 | AT2G27500.2 | 63.295 | 346 | 126 | 1 | 22 | 366 | 22 | 367 | 6.94e-173 | 487 |
| Msa0680300 | AT2G27500.1 | 62.011 | 358 | 135 | 1 | 22 | 378 | 22 | 379 | 6.99e-173 | 488 |
| Msa0680300 | AT2G27500.3 | 60.797 | 301 | 117 | 1 | 79 | 378 | 1 | 301 | 5.24e-142 | 406 |
| Msa0680300 | AT1G32860.1 | 53.868 | 349 | 159 | 1 | 1 | 347 | 1 | 349 | 9.22e-139 | 402 |
| Msa0680300 | AT5G42100.1 | 53.704 | 324 | 147 | 2 | 28 | 348 | 26 | 349 | 1.85e-124 | 366 |
| Msa0680300 | AT5G42100.2 | 53.704 | 324 | 147 | 2 | 28 | 348 | 26 | 349 | 2.01e-124 | 366 |
| Msa0680300 | AT4G18340.2 | 48.563 | 348 | 176 | 2 | 3 | 347 | 5 | 352 | 1.83e-122 | 359 |
| Msa0680300 | AT4G18340.1 | 48.563 | 348 | 176 | 2 | 3 | 347 | 5 | 352 | 2.26e-122 | 360 |
| Msa0680300 | AT1G30080.1 | 48.529 | 340 | 170 | 2 | 10 | 346 | 16 | 353 | 2.47e-117 | 347 |
| Msa0680300 | AT1G30080.2 | 48.529 | 340 | 170 | 2 | 10 | 346 | 16 | 353 | 2.98e-117 | 346 |
| Msa0680300 | AT3G15800.1 | 47.550 | 347 | 178 | 3 | 28 | 370 | 42 | 388 | 4.32e-116 | 343 |
| Msa0680300 | AT2G26600.1 | 42.033 | 364 | 204 | 3 | 23 | 379 | 25 | 388 | 5.78e-110 | 328 |
| Msa0680300 | AT4G26830.1 | 46.131 | 336 | 176 | 4 | 12 | 345 | 9 | 341 | 3.97e-103 | 312 |
| Msa0680300 | AT4G26830.2 | 47.799 | 318 | 162 | 3 | 30 | 345 | 30 | 345 | 9.75e-103 | 311 |
| Msa0680300 | AT5G55180.2 | 45.201 | 323 | 174 | 3 | 29 | 349 | 27 | 348 | 8.81e-97 | 296 |
| Msa0680300 | AT5G55180.1 | 45.201 | 323 | 174 | 3 | 29 | 349 | 27 | 348 | 1.55e-96 | 296 |
| Msa0680300 | AT2G05790.1 | 46.894 | 322 | 164 | 4 | 28 | 345 | 24 | 342 | 3.26e-95 | 293 |
| Msa0680300 | AT4G34480.2 | 44.543 | 339 | 186 | 2 | 11 | 347 | 7 | 345 | 1.37e-94 | 287 |
| Msa0680300 | AT2G16230.1 | 45.231 | 325 | 176 | 2 | 25 | 347 | 20 | 344 | 4.64e-94 | 291 |
| Msa0680300 | AT4G34480.1 | 43.714 | 350 | 195 | 2 | 11 | 358 | 7 | 356 | 1.16e-92 | 287 |
| Msa0680300 | AT5G24318.4 | 43.168 | 322 | 177 | 3 | 28 | 347 | 29 | 346 | 6.56e-92 | 281 |
| Msa0680300 | AT2G26600.2 | 43.151 | 292 | 163 | 1 | 91 | 379 | 3 | 294 | 4.31e-91 | 276 |
| Msa0680300 | AT5G24318.2 | 41.279 | 344 | 196 | 3 | 6 | 347 | 7 | 346 | 1.53e-90 | 280 |
| Msa0680300 | AT5G24318.1 | 41.279 | 344 | 196 | 3 | 6 | 347 | 7 | 346 | 2.38e-90 | 280 |
| Msa0680300 | AT5G42720.1 | 43.275 | 342 | 185 | 4 | 10 | 347 | 10 | 346 | 6.60e-90 | 278 |
| Msa0680300 | AT5G56590.1 | 41.411 | 326 | 189 | 2 | 26 | 349 | 23 | 348 | 3.50e-87 | 273 |
| Msa0680300 | AT4G29360.1 | 42.939 | 347 | 189 | 4 | 4 | 349 | 9 | 347 | 5.99e-84 | 266 |
| Msa0680300 | AT4G29360.2 | 44.237 | 321 | 177 | 2 | 30 | 349 | 38 | 357 | 1.70e-83 | 265 |
| Msa0680300 | AT3G07320.1 | 41.231 | 325 | 185 | 5 | 30 | 349 | 26 | 349 | 9.67e-83 | 260 |
| Msa0680300 | AT2G01630.2 | 39.385 | 325 | 192 | 3 | 29 | 349 | 23 | 346 | 3.47e-79 | 249 |
| Msa0680300 | AT2G01630.3 | 39.385 | 325 | 192 | 3 | 29 | 349 | 23 | 346 | 1.24e-78 | 249 |
| Msa0680300 | AT2G01630.1 | 39.385 | 325 | 192 | 3 | 29 | 349 | 23 | 346 | 9.65e-78 | 248 |
| Msa0680300 | AT4G16260.1 | 38.690 | 336 | 198 | 4 | 10 | 345 | 5 | 332 | 8.34e-77 | 241 |
| Msa0680300 | AT2G39640.1 | 39.706 | 340 | 195 | 5 | 10 | 347 | 9 | 340 | 2.15e-76 | 246 |
| Msa0680300 | AT4G14080.1 | 38.226 | 327 | 197 | 4 | 30 | 352 | 43 | 368 | 9.24e-76 | 243 |
| Msa0680300 | AT3G23770.1 | 38.838 | 327 | 192 | 5 | 30 | 349 | 38 | 363 | 4.10e-74 | 238 |
| Msa0680300 | AT3G55430.1 | 38.953 | 344 | 190 | 11 | 28 | 360 | 28 | 362 | 3.11e-73 | 235 |
| Msa0680300 | AT4G16260.2 | 39.355 | 310 | 180 | 4 | 36 | 345 | 2 | 303 | 1.30e-72 | 229 |
| Msa0680300 | AT3G13560.4 | 35.913 | 323 | 202 | 3 | 25 | 343 | 22 | 343 | 6.85e-72 | 233 |
| Msa0680300 | AT3G13560.1 | 35.913 | 323 | 202 | 3 | 25 | 343 | 22 | 343 | 6.85e-72 | 233 |
| Msa0680300 | AT3G13560.2 | 35.913 | 323 | 202 | 3 | 25 | 343 | 22 | 343 | 6.85e-72 | 233 |
| Msa0680300 | AT3G13560.5 | 35.913 | 323 | 202 | 3 | 25 | 343 | 22 | 343 | 6.85e-72 | 233 |
| Msa0680300 | AT3G13560.3 | 35.913 | 323 | 202 | 3 | 25 | 343 | 22 | 343 | 6.85e-72 | 233 |
| Msa0680300 | AT1G11820.1 | 37.346 | 324 | 198 | 3 | 30 | 349 | 45 | 367 | 5.15e-71 | 228 |
| Msa0680300 | AT1G11820.3 | 37.346 | 324 | 198 | 3 | 30 | 349 | 45 | 367 | 5.30e-70 | 228 |
| Msa0680300 | AT1G11820.2 | 37.346 | 324 | 198 | 3 | 30 | 349 | 45 | 367 | 1.17e-69 | 228 |
| Msa0680300 | AT3G57270.1 | 36.842 | 323 | 192 | 7 | 26 | 345 | 24 | 337 | 9.04e-69 | 220 |
| Msa0680300 | AT4G34480.3 | 47.737 | 243 | 127 | 0 | 116 | 358 | 3 | 245 | 7.97e-68 | 219 |
| Msa0680300 | AT3G46570.1 | 38.081 | 344 | 200 | 9 | 10 | 348 | 10 | 345 | 1.17e-66 | 215 |
| Msa0680300 | AT1G66250.1 | 35.404 | 322 | 202 | 4 | 26 | 343 | 29 | 348 | 1.41e-65 | 217 |
| Msa0680300 | AT3G61810.1 | 34.365 | 323 | 196 | 5 | 30 | 345 | 56 | 369 | 1.30e-61 | 203 |
| Msa0680300 | AT5G24318.3 | 45.024 | 211 | 111 | 2 | 138 | 347 | 1 | 207 | 2.15e-58 | 193 |
| Msa0680300 | AT3G57260.1 | 32.938 | 337 | 211 | 8 | 10 | 345 | 14 | 336 | 9.20e-58 | 192 |
| Msa0680300 | AT3G57260.2 | 32.938 | 337 | 211 | 8 | 10 | 345 | 30 | 352 | 1.42e-57 | 192 |
| Msa0680300 | AT1G77780.1 | 34.018 | 341 | 214 | 8 | 6 | 345 | 2 | 332 | 2.66e-57 | 191 |
| Msa0680300 | AT1G77790.1 | 35.423 | 319 | 195 | 7 | 30 | 345 | 31 | 341 | 5.72e-57 | 190 |
| Msa0680300 | AT5G20340.1 | 36.137 | 321 | 193 | 9 | 28 | 345 | 42 | 353 | 7.88e-56 | 187 |
| Msa0680300 | AT3G57240.1 | 34.286 | 315 | 192 | 8 | 30 | 343 | 36 | 336 | 1.81e-54 | 183 |
| Msa0680300 | AT5G20390.1 | 34.796 | 319 | 196 | 8 | 30 | 345 | 34 | 343 | 1.52e-53 | 181 |
| Msa0680300 | AT5G20330.1 | 33.913 | 345 | 216 | 9 | 4 | 345 | 9 | 344 | 8.18e-52 | 176 |
| Msa0680300 | AT3G55780.1 | 36.634 | 303 | 176 | 9 | 42 | 336 | 48 | 342 | 2.73e-49 | 171 |
| Msa0680300 | AT1G64760.1 | 32.948 | 346 | 213 | 12 | 13 | 349 | 11 | 346 | 3.91e-49 | 173 |
| Msa0680300 | AT1G64760.2 | 32.948 | 346 | 213 | 12 | 13 | 349 | 11 | 346 | 3.91e-49 | 173 |
| Msa0680300 | AT2G19440.2 | 33.433 | 335 | 204 | 12 | 24 | 349 | 18 | 342 | 1.74e-48 | 171 |
| Msa0680300 | AT2G19440.1 | 33.433 | 335 | 204 | 12 | 24 | 349 | 18 | 342 | 1.74e-48 | 171 |
| Msa0680300 | AT5G20870.1 | 32.982 | 379 | 221 | 16 | 1 | 359 | 1 | 366 | 4.56e-48 | 171 |
| Msa0680300 | AT1G33220.1 | 32.571 | 350 | 210 | 10 | 4 | 345 | 3 | 334 | 6.94e-48 | 166 |
| Msa0680300 | AT5G18220.1 | 28.857 | 350 | 236 | 9 | 28 | 371 | 29 | 371 | 3.07e-46 | 165 |
| Msa0680300 | AT5G58090.1 | 31.707 | 328 | 209 | 10 | 28 | 347 | 21 | 341 | 6.73e-44 | 159 |
| Msa0680300 | AT3G04010.1 | 30.214 | 374 | 240 | 10 | 9 | 371 | 13 | 376 | 1.43e-43 | 158 |
| Msa0680300 | AT4G31140.1 | 29.885 | 348 | 223 | 11 | 11 | 347 | 9 | 346 | 5.00e-43 | 156 |
| Msa0680300 | AT5G64790.1 | 27.762 | 353 | 240 | 10 | 28 | 372 | 27 | 372 | 4.18e-42 | 154 |
| Msa0680300 | AT3G24330.1 | 31.624 | 351 | 221 | 11 | 10 | 349 | 20 | 362 | 2.38e-41 | 152 |
| Msa0680300 | AT5G58480.1 | 31.579 | 323 | 206 | 9 | 30 | 344 | 27 | 342 | 1.13e-40 | 150 |
| Msa0680300 | AT5G20560.1 | 30.240 | 334 | 219 | 8 | 10 | 337 | 11 | 336 | 2.14e-38 | 141 |
| Msa0680300 | AT4G17180.1 | 29.179 | 329 | 211 | 11 | 28 | 347 | 24 | 339 | 7.22e-36 | 137 |
Find 81 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGTTATGCAATTTATTT+TGG | 0.148253 | 4_4:-39344871 | None:intergenic |
| TCAAATGTTGAATTTGTTAT+AGG | 0.179247 | 4_4:+39344759 | Msa0680300:CDS |
| ACCCTTCTAAAGCTCAAAAT+TGG | 0.203490 | 4_4:+39344814 | Msa0680300:CDS |
| CAAATCAATGGCTTAAGTTT+TGG | 0.205246 | 4_4:+39344606 | Msa0680300:CDS |
| GTTGAATTTGTTATAGGAAT+TGG | 0.226002 | 4_4:+39344765 | Msa0680300:CDS |
| AACAAATTCAACATTTGATT+TGG | 0.238369 | 4_4:-39344754 | None:intergenic |
| TTCTTTCTTCTCACCATATC+AGG | 0.241529 | 4_4:+39344483 | Msa0680300:CDS |
| ATGTTTGATCTTTGCTTTAG+AGG | 0.263954 | 4_4:+39345924 | Msa0680300:CDS |
| TAGTTTAAAGATACCTCATT+AGG | 0.279200 | 4_4:-39345173 | None:intergenic |
| ATCTGATCTTTGATTATAAT+AGG | 0.317029 | 4_4:-39344418 | None:intergenic |
| GAGAAAGCAAGTAGAACATT+TGG | 0.321710 | 4_4:-39344732 | None:intergenic |
| AATGGCGACGCCGATGAAAT+TGG | 0.330096 | 4_4:+39345353 | Msa0680300:CDS |
| TCGTCAAGAAATTCAACTAT+TGG | 0.331086 | 4_4:-39345095 | None:intergenic |
| TTTCAATGTTCTTGCATGTA+TGG | 0.347057 | 4_4:+39345897 | Msa0680300:CDS |
| CTGTTGTAACATTAATTACT+TGG | 0.348668 | 4_4:-39344992 | None:intergenic |
| TCATAATGCAAATTTGTGTT+TGG | 0.354916 | 4_4:-39345230 | None:intergenic |
| ATTGGAACCAATGGATTTCC+AGG | 0.366015 | 4_4:-39345446 | None:intergenic |
| AAATATTAAGGAACCTGATA+TGG | 0.368766 | 4_4:-39344496 | None:intergenic |
| TATGCTGCAATCAAAGTGAT+AGG | 0.372456 | 4_4:+39345284 | Msa0680300:CDS |
| GTATACCAATGTTGAAGTTA+AGG | 0.389324 | 4_4:+39345307 | Msa0680300:CDS |
| CAAAATGCAAAATTGTATAA+TGG | 0.390414 | 4_4:+39345386 | Msa0680300:CDS |
| GGATCGACTAAACCTTCATT+TGG | 0.397849 | 4_4:-39345209 | None:intergenic |
| TGTAATCCAATGTTATAAAC+TGG | 0.399547 | 4_4:-39345560 | None:intergenic |
| CCTGCTTCAGAAAGAAACTA+TGG | 0.401079 | 4_4:+39345515 | Msa0680300:CDS |
| AGTTTAAAGATACCTCATTA+GGG | 0.402444 | 4_4:-39345172 | None:intergenic |
| CATAATTCTCTTGTTAAGCT+TGG | 0.406983 | 4_4:+39344963 | Msa0680300:CDS |
| CCATAGTTTCTTTCTGAAGC+AGG | 0.437326 | 4_4:-39345515 | None:intergenic |
| TATGAATACTGGATCTATAG+TGG | 0.438871 | 4_4:+39346076 | Msa0680300:three_prime_UTR |
| TATAATAGGCAACAATATCT+AGG | 0.443305 | 4_4:-39344404 | None:intergenic |
| GAAGTTAAGGTTTCTGAGAC+AGG | 0.447516 | 4_4:+39345320 | Msa0680300:CDS |
| AAGTGATTTGAAGAAGGAAA+AGG | 0.449912 | 4_4:-39344457 | None:intergenic |
| CACGTGGATCATATGAATAC+TGG | 0.450386 | 4_4:+39346065 | Msa0680300:three_prime_UTR |
| GATTCATTTAAGCAAATCAA+TGG | 0.450746 | 4_4:+39344594 | Msa0680300:intron |
| AATTCTTACCCTCCTTCGTC+CGG | 0.452125 | 4_4:+39345038 | Msa0680300:CDS |
| GAGGAAAGACATGGAACTCC+TGG | 0.456953 | 4_4:+39345428 | Msa0680300:CDS |
| AAAATAAATTGCATAACTGT+TGG | 0.468767 | 4_4:+39344873 | Msa0680300:CDS |
| CAAATCTGACCTAAAAGAAC+CGG | 0.469027 | 4_4:-39345057 | None:intergenic |
| ACAAGGTTATCTACCACAAA+TGG | 0.472431 | 4_4:+39345580 | Msa0680300:CDS |
| GAGACAGGTTGGCCTTCAAA+TGG | 0.474442 | 4_4:+39345335 | Msa0680300:CDS |
| ATACTTTAATGAGGAGGAAG+AGG | 0.475150 | 4_4:-39344301 | None:intergenic |
| GCATTATTTCAACCAAATGA+AGG | 0.475383 | 4_4:+39345197 | Msa0680300:CDS |
| AGCTGATATATATTATATAT+AGG | 0.476570 | 4_4:-39346109 | None:intergenic |
| GGTAGACCAGTTTATAACAT+TGG | 0.488178 | 4_4:+39345554 | Msa0680300:CDS |
| GAAAAGAAGTGATTTGAAGA+AGG | 0.488719 | 4_4:-39344463 | None:intergenic |
| TTTCTTTCTGAAGCAGGACC+AGG | 0.491860 | 4_4:-39345509 | None:intergenic |
| AAATTTGCTTAGAAGAATTG+AGG | 0.496626 | 4_4:+39345409 | Msa0680300:CDS |
| TTATAAACTGGTCTACCATC+AGG | 0.497918 | 4_4:-39345548 | None:intergenic |
| TTGGATGGCACAACCATTTG+TGG | 0.503269 | 4_4:-39345593 | None:intergenic |
| TATACATCAATTGGAACCAA+TGG | 0.507282 | 4_4:-39345455 | None:intergenic |
| TCATCGGCGTCGCCATTTGA+AGG | 0.508122 | 4_4:-39345347 | None:intergenic |
| TGGTGTAGCACCAATTTCAT+CGG | 0.510200 | 4_4:-39345363 | None:intergenic |
| GTTTATAACATTGGATTACA+AGG | 0.510666 | 4_4:+39345563 | Msa0680300:CDS |
| AAAGTGAGGTGATGCAAAGT+TGG | 0.515613 | 4_4:-39344376 | None:intergenic |
| ATATTAAATATACTTTAATG+AGG | 0.516790 | 4_4:-39344310 | None:intergenic |
| GAGGTGAGGGAATATTCAAA+TGG | 0.520983 | 4_4:+39345943 | Msa0680300:CDS |
| AGAAACCTTAACTTCAACAT+TGG | 0.523456 | 4_4:-39345312 | None:intergenic |
| TTGCTTACATTAGATTTGGA+TGG | 0.524160 | 4_4:-39345608 | None:intergenic |
| TCTTGAATGAGATGGTAGAT+TGG | 0.531449 | 4_4:-39344652 | None:intergenic |
| GATCTTTGCTTTAGAGGTGA+GGG | 0.533155 | 4_4:+39345930 | Msa0680300:CDS |
| TGATCTTTGCTTTAGAGGTG+AGG | 0.547311 | 4_4:+39345929 | Msa0680300:CDS |
| TTTAATGAAGATTTAAAACC+TGG | 0.550510 | 4_4:+39345491 | Msa0680300:CDS |
| TATGGACTTTATTATCCTGA+TGG | 0.553442 | 4_4:+39345533 | Msa0680300:CDS |
| TGGAACTCCTGGAAATCCAT+TGG | 0.557029 | 4_4:+39345439 | Msa0680300:CDS |
| TTAAGGTTTCTGAGACAGGT+TGG | 0.560373 | 4_4:+39345324 | Msa0680300:CDS |
| TAAAAGAACCGGACGAAGGA+GGG | 0.563985 | 4_4:-39345046 | None:intergenic |
| TTAAATATACTTTAATGAGG+AGG | 0.569230 | 4_4:-39344307 | None:intergenic |
| TCTAGTCTTGAAAACATGGT+TGG | 0.571691 | 4_4:+39344269 | Msa0680300:five_prime_UTR |
| CTTTAATGAGGAGGAAGAGG+AGG | 0.591171 | 4_4:-39344298 | None:intergenic |
| ATGCTGCAATCAAAGTGATA+GGG | 0.595645 | 4_4:+39345285 | Msa0680300:CDS |
| ACAGCAACTCTTGAATGAGA+TGG | 0.598349 | 4_4:-39344660 | None:intergenic |
| TTTAATGAGGAGGAAGAGGA+GGG | 0.600847 | 4_4:-39344297 | None:intergenic |
| AAACTCTAGTCTTGAAAACA+TGG | 0.602423 | 4_4:+39344265 | Msa0680300:five_prime_UTR |
| CTAAAAGAACCGGACGAAGG+AGG | 0.620046 | 4_4:-39345047 | None:intergenic |
| ATATAAAGATAACCCTAATG+AGG | 0.620782 | 4_4:+39345160 | Msa0680300:CDS |
| AGAAGAATTGAGGAAAGACA+TGG | 0.624353 | 4_4:+39345419 | Msa0680300:CDS |
| ATATCTAGGCACAGAAAGTG+AGG | 0.627755 | 4_4:-39344390 | None:intergenic |
| GACCTAAAAGAACCGGACGA+AGG | 0.662778 | 4_4:-39345050 | None:intergenic |
| GGATTAATAATGTGTGAGTG+TGG | 0.667010 | 4_4:-39344355 | None:intergenic |
| TTAATGAGGAGGAAGAGGAG+GGG | 0.680651 | 4_4:-39344296 | None:intergenic |
| CAGTATTCATATGATCCACG+TGG | 0.708224 | 4_4:-39346064 | None:intergenic |
| TATTTCTTAGATATACCACG+TGG | 0.782070 | 4_4:+39346049 | Msa0680300:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAATATACTTTAATG+AGG | - | chr4_4:39344313-39344332 | None:intergenic | 10.0% |
| !!! | AATATTTTTTTATTTATGCT+TGG | + | chr4_4:39345785-39345804 | Msa0680300:intron | 10.0% |
| !! | ATATTAAATATACTTTAATG+AGG | - | chr4_4:39344313-39344332 | None:intergenic | 10.0% |
| !!! | AATATTTTTTTATTTATGCT+TGG | + | chr4_4:39345785-39345804 | Msa0680300:intron | 10.0% |
| !! | TATCTTTATATGCAAAAAAA+GGG | - | chr4_4:39345151-39345170 | None:intergenic | 15.0% |
| !! | TTATCTTTATATGCAAAAAA+AGG | - | chr4_4:39345152-39345171 | None:intergenic | 15.0% |
| !! | ACATAAAAATTAATCTCAAA+AGG | - | chr4_4:39345645-39345664 | None:intergenic | 15.0% |
| !! | TTAAAAACTACTACAAAAAT+TGG | - | chr4_4:39345830-39345849 | None:intergenic | 15.0% |
| !! | AAAATGAAAAAACAATATTC+AGG | - | chr4_4:39345971-39345990 | None:intergenic | 15.0% |
| !! | TATCTTTATATGCAAAAAAA+GGG | - | chr4_4:39345151-39345170 | None:intergenic | 15.0% |
| !! | TTATCTTTATATGCAAAAAA+AGG | - | chr4_4:39345152-39345171 | None:intergenic | 15.0% |
| !! | ACATAAAAATTAATCTCAAA+AGG | - | chr4_4:39345645-39345664 | None:intergenic | 15.0% |
| !! | TTAAAAACTACTACAAAAAT+TGG | - | chr4_4:39345830-39345849 | None:intergenic | 15.0% |
| !! | AAAATGAAAAAACAATATTC+AGG | - | chr4_4:39345971-39345990 | None:intergenic | 15.0% |
| !! | TTAAATATACTTTAATGAGG+AGG | - | chr4_4:39344310-39344329 | None:intergenic | 20.0% |
| !! | ATCTGATCTTTGATTATAAT+AGG | - | chr4_4:39344421-39344440 | None:intergenic | 20.0% |
| !! | TAGAGAGAAGATAAATATTA+AGG | - | chr4_4:39344511-39344530 | None:intergenic | 20.0% |
| !!! | TTAAGTTTTGGAATAAACTA+TGG | + | chr4_4:39344618-39344637 | Msa0680300:CDS | 20.0% |
| !! | AACAAATTCAACATTTGATT+TGG | - | chr4_4:39344757-39344776 | None:intergenic | 20.0% |
| !!! | TCAAATGTTGAATTTGTTAT+AGG | + | chr4_4:39344759-39344778 | Msa0680300:CDS | 20.0% |
| !!! | AATTTATTTTGGTTTGTGAA+AGG | - | chr4_4:39344863-39344882 | None:intergenic | 20.0% |
| !!! | AACAGTTATGCAATTTATTT+TGG | - | chr4_4:39344874-39344893 | None:intergenic | 20.0% |
| !! | AAAATAAATTGCATAACTGT+TGG | + | chr4_4:39344873-39344892 | Msa0680300:CDS | 20.0% |
| !!! | TTATACAATTTTGCATTTTG+TGG | - | chr4_4:39345386-39345405 | None:intergenic | 20.0% |
| !! | CAAAATGCAAAATTGTATAA+TGG | + | chr4_4:39345386-39345405 | Msa0680300:CDS | 20.0% |
| !!! | TTTAATGAAGATTTAAAACC+TGG | + | chr4_4:39345491-39345510 | Msa0680300:CDS | 20.0% |
| !!! | AATTTTGCTTACATTAGATT+TGG | - | chr4_4:39345615-39345634 | None:intergenic | 20.0% |
| !! | TTAAATATACTTTAATGAGG+AGG | - | chr4_4:39344310-39344329 | None:intergenic | 20.0% |
| !! | ATCTGATCTTTGATTATAAT+AGG | - | chr4_4:39344421-39344440 | None:intergenic | 20.0% |
| !! | TAGAGAGAAGATAAATATTA+AGG | - | chr4_4:39344511-39344530 | None:intergenic | 20.0% |
| !!! | TTAAGTTTTGGAATAAACTA+TGG | + | chr4_4:39344618-39344637 | Msa0680300:CDS | 20.0% |
| !! | AACAAATTCAACATTTGATT+TGG | - | chr4_4:39344757-39344776 | None:intergenic | 20.0% |
| !!! | TCAAATGTTGAATTTGTTAT+AGG | + | chr4_4:39344759-39344778 | Msa0680300:CDS | 20.0% |
| !!! | AATTTATTTTGGTTTGTGAA+AGG | - | chr4_4:39344863-39344882 | None:intergenic | 20.0% |
| !!! | AACAGTTATGCAATTTATTT+TGG | - | chr4_4:39344874-39344893 | None:intergenic | 20.0% |
| !! | AAAATAAATTGCATAACTGT+TGG | + | chr4_4:39344873-39344892 | Msa0680300:CDS | 20.0% |
| !!! | TTATACAATTTTGCATTTTG+TGG | - | chr4_4:39345386-39345405 | None:intergenic | 20.0% |
| !! | CAAAATGCAAAATTGTATAA+TGG | + | chr4_4:39345386-39345405 | Msa0680300:CDS | 20.0% |
| !!! | TTTAATGAAGATTTAAAACC+TGG | + | chr4_4:39345491-39345510 | Msa0680300:CDS | 20.0% |
| !!! | AATTTTGCTTACATTAGATT+TGG | - | chr4_4:39345615-39345634 | None:intergenic | 20.0% |
| !!! | GATTTTGATTACAACTTTGT+TGG | - | chr4_4:39344230-39344249 | None:intergenic | 25.0% |
| ! | TATAATAGGCAACAATATCT+AGG | - | chr4_4:39344407-39344426 | None:intergenic | 25.0% |
| ! | AAATATTAAGGAACCTGATA+TGG | - | chr4_4:39344499-39344518 | None:intergenic | 25.0% |
| ! | GATTCATTTAAGCAAATCAA+TGG | + | chr4_4:39344594-39344613 | Msa0680300:intron | 25.0% |
| !!! | GTTGAATTTGTTATAGGAAT+TGG | + | chr4_4:39344765-39344784 | Msa0680300:CDS | 25.0% |
| !! | TTATGAACATTTTGCATTGA+AGG | - | chr4_4:39344948-39344967 | None:intergenic | 25.0% |
| ! | CTGTTGTAACATTAATTACT+TGG | - | chr4_4:39344995-39345014 | None:intergenic | 25.0% |
| !! | AGCTCATTCTTTTAACATTT+TGG | + | chr4_4:39345013-39345032 | Msa0680300:CDS | 25.0% |
| ! | ATATAAAGATAACCCTAATG+AGG | + | chr4_4:39345160-39345179 | Msa0680300:CDS | 25.0% |
| ! | AGTTTAAAGATACCTCATTA+GGG | - | chr4_4:39345175-39345194 | None:intergenic | 25.0% |
| ! | TAGTTTAAAGATACCTCATT+AGG | - | chr4_4:39345176-39345195 | None:intergenic | 25.0% |
| ! | TCATAATGCAAATTTGTGTT+TGG | - | chr4_4:39345233-39345252 | None:intergenic | 25.0% |
| !! | AAATTTGCTTAGAAGAATTG+AGG | + | chr4_4:39345409-39345428 | Msa0680300:CDS | 25.0% |
| ! | GCAAAAACATATACATCAAT+TGG | - | chr4_4:39345467-39345486 | None:intergenic | 25.0% |
| ! | TGTAATCCAATGTTATAAAC+TGG | - | chr4_4:39345563-39345582 | None:intergenic | 25.0% |
| ! | GTTTATAACATTGGATTACA+AGG | + | chr4_4:39345563-39345582 | Msa0680300:CDS | 25.0% |
| !! | GATTAATTTTTATGTACCGA+TGG | + | chr4_4:39345650-39345669 | Msa0680300:intron | 25.0% |
| !! | TCTAATTTCCTTGCAATTTT+TGG | + | chr4_4:39345991-39346010 | Msa0680300:three_prime_UTR | 25.0% |
| !! | CTAATTTCCTTGCAATTTTT+GGG | + | chr4_4:39345992-39346011 | Msa0680300:three_prime_UTR | 25.0% |
| !!! | GATTTTGATTACAACTTTGT+TGG | - | chr4_4:39344230-39344249 | None:intergenic | 25.0% |
| ! | TATAATAGGCAACAATATCT+AGG | - | chr4_4:39344407-39344426 | None:intergenic | 25.0% |
| ! | AAATATTAAGGAACCTGATA+TGG | - | chr4_4:39344499-39344518 | None:intergenic | 25.0% |
| ! | GATTCATTTAAGCAAATCAA+TGG | + | chr4_4:39344594-39344613 | Msa0680300:intron | 25.0% |
| !!! | GTTGAATTTGTTATAGGAAT+TGG | + | chr4_4:39344765-39344784 | Msa0680300:CDS | 25.0% |
| !! | TTATGAACATTTTGCATTGA+AGG | - | chr4_4:39344948-39344967 | None:intergenic | 25.0% |
| ! | CTGTTGTAACATTAATTACT+TGG | - | chr4_4:39344995-39345014 | None:intergenic | 25.0% |
| !! | AGCTCATTCTTTTAACATTT+TGG | + | chr4_4:39345013-39345032 | Msa0680300:CDS | 25.0% |
| ! | ATATAAAGATAACCCTAATG+AGG | + | chr4_4:39345160-39345179 | Msa0680300:CDS | 25.0% |
| ! | AGTTTAAAGATACCTCATTA+GGG | - | chr4_4:39345175-39345194 | None:intergenic | 25.0% |
| ! | TAGTTTAAAGATACCTCATT+AGG | - | chr4_4:39345176-39345195 | None:intergenic | 25.0% |
| ! | TCATAATGCAAATTTGTGTT+TGG | - | chr4_4:39345233-39345252 | None:intergenic | 25.0% |
| !! | AAATTTGCTTAGAAGAATTG+AGG | + | chr4_4:39345409-39345428 | Msa0680300:CDS | 25.0% |
| ! | GCAAAAACATATACATCAAT+TGG | - | chr4_4:39345467-39345486 | None:intergenic | 25.0% |
| ! | TGTAATCCAATGTTATAAAC+TGG | - | chr4_4:39345563-39345582 | None:intergenic | 25.0% |
| ! | GTTTATAACATTGGATTACA+AGG | + | chr4_4:39345563-39345582 | Msa0680300:CDS | 25.0% |
| !! | GATTAATTTTTATGTACCGA+TGG | + | chr4_4:39345650-39345669 | Msa0680300:intron | 25.0% |
| !! | TCTAATTTCCTTGCAATTTT+TGG | + | chr4_4:39345991-39346010 | Msa0680300:three_prime_UTR | 25.0% |
| !! | CTAATTTCCTTGCAATTTTT+GGG | + | chr4_4:39345992-39346011 | Msa0680300:three_prime_UTR | 25.0% |
| !! | AAACTCTAGTCTTGAAAACA+TGG | + | chr4_4:39344265-39344284 | Msa0680300:five_prime_UTR | 30.0% |
| AAGTGATTTGAAGAAGGAAA+AGG | - | chr4_4:39344460-39344479 | None:intergenic | 30.0% | |
| GAAAAGAAGTGATTTGAAGA+AGG | - | chr4_4:39344466-39344485 | None:intergenic | 30.0% | |
| ! | CAAATCAATGGCTTAAGTTT+TGG | + | chr4_4:39344606-39344625 | Msa0680300:CDS | 30.0% |
| !!! | TCCAATTTTGAGCTTTAGAA+GGG | - | chr4_4:39344818-39344837 | None:intergenic | 30.0% |
| !!! | ATCCAATTTTGAGCTTTAGA+AGG | - | chr4_4:39344819-39344838 | None:intergenic | 30.0% |
| !!! | ATTTTGGTTTGTGAAAGGTA+AGG | - | chr4_4:39344858-39344877 | None:intergenic | 30.0% |
| CATAATTCTCTTGTTAAGCT+TGG | + | chr4_4:39344963-39344982 | Msa0680300:CDS | 30.0% | |
| TCGTCAAGAAATTCAACTAT+TGG | - | chr4_4:39345098-39345117 | None:intergenic | 30.0% | |
| GCATTATTTCAACCAAATGA+AGG | + | chr4_4:39345197-39345216 | Msa0680300:CDS | 30.0% | |
| GTATACCAATGTTGAAGTTA+AGG | + | chr4_4:39345307-39345326 | Msa0680300:CDS | 30.0% | |
| AGAAACCTTAACTTCAACAT+TGG | - | chr4_4:39345315-39345334 | None:intergenic | 30.0% | |
| TATACATCAATTGGAACCAA+TGG | - | chr4_4:39345458-39345477 | None:intergenic | 30.0% | |
| TATGGACTTTATTATCCTGA+TGG | + | chr4_4:39345533-39345552 | Msa0680300:CDS | 30.0% | |
| TTGCTTACATTAGATTTGGA+TGG | - | chr4_4:39345611-39345630 | None:intergenic | 30.0% | |
| ATGCTTGGCTATTAGATTAT+TGG | + | chr4_4:39345800-39345819 | Msa0680300:intron | 30.0% | |
| TTTCAATGTTCTTGCATGTA+TGG | + | chr4_4:39345897-39345916 | Msa0680300:CDS | 30.0% | |
| ATGTTTGATCTTTGCTTTAG+AGG | + | chr4_4:39345924-39345943 | Msa0680300:CDS | 30.0% | |
| TATTTCTTAGATATACCACG+TGG | + | chr4_4:39346049-39346068 | Msa0680300:three_prime_UTR | 30.0% | |
| TATGAATACTGGATCTATAG+TGG | + | chr4_4:39346076-39346095 | Msa0680300:three_prime_UTR | 30.0% | |
| !! | AAACTCTAGTCTTGAAAACA+TGG | + | chr4_4:39344265-39344284 | Msa0680300:five_prime_UTR | 30.0% |
| AAGTGATTTGAAGAAGGAAA+AGG | - | chr4_4:39344460-39344479 | None:intergenic | 30.0% | |
| GAAAAGAAGTGATTTGAAGA+AGG | - | chr4_4:39344466-39344485 | None:intergenic | 30.0% | |
| ! | CAAATCAATGGCTTAAGTTT+TGG | + | chr4_4:39344606-39344625 | Msa0680300:CDS | 30.0% |
| !!! | TCCAATTTTGAGCTTTAGAA+GGG | - | chr4_4:39344818-39344837 | None:intergenic | 30.0% |
| !!! | ATCCAATTTTGAGCTTTAGA+AGG | - | chr4_4:39344819-39344838 | None:intergenic | 30.0% |
| !!! | ATTTTGGTTTGTGAAAGGTA+AGG | - | chr4_4:39344858-39344877 | None:intergenic | 30.0% |
| CATAATTCTCTTGTTAAGCT+TGG | + | chr4_4:39344963-39344982 | Msa0680300:CDS | 30.0% | |
| TCGTCAAGAAATTCAACTAT+TGG | - | chr4_4:39345098-39345117 | None:intergenic | 30.0% | |
| GCATTATTTCAACCAAATGA+AGG | + | chr4_4:39345197-39345216 | Msa0680300:CDS | 30.0% | |
| GTATACCAATGTTGAAGTTA+AGG | + | chr4_4:39345307-39345326 | Msa0680300:CDS | 30.0% | |
| AGAAACCTTAACTTCAACAT+TGG | - | chr4_4:39345315-39345334 | None:intergenic | 30.0% | |
| TATACATCAATTGGAACCAA+TGG | - | chr4_4:39345458-39345477 | None:intergenic | 30.0% | |
| TATGGACTTTATTATCCTGA+TGG | + | chr4_4:39345533-39345552 | Msa0680300:CDS | 30.0% | |
| TTGCTTACATTAGATTTGGA+TGG | - | chr4_4:39345611-39345630 | None:intergenic | 30.0% | |
| ATGCTTGGCTATTAGATTAT+TGG | + | chr4_4:39345800-39345819 | Msa0680300:intron | 30.0% | |
| TTTCAATGTTCTTGCATGTA+TGG | + | chr4_4:39345897-39345916 | Msa0680300:CDS | 30.0% | |
| ATGTTTGATCTTTGCTTTAG+AGG | + | chr4_4:39345924-39345943 | Msa0680300:CDS | 30.0% | |
| TATTTCTTAGATATACCACG+TGG | + | chr4_4:39346049-39346068 | Msa0680300:three_prime_UTR | 30.0% | |
| TATGAATACTGGATCTATAG+TGG | + | chr4_4:39346076-39346095 | Msa0680300:three_prime_UTR | 30.0% | |
| !! | TCTAGTCTTGAAAACATGGT+TGG | + | chr4_4:39344269-39344288 | Msa0680300:five_prime_UTR | 35.0% |
| ATACTTTAATGAGGAGGAAG+AGG | - | chr4_4:39344304-39344323 | None:intergenic | 35.0% | |
| GGATTAATAATGTGTGAGTG+TGG | - | chr4_4:39344358-39344377 | None:intergenic | 35.0% | |
| TTCTTTCTTCTCACCATATC+AGG | + | chr4_4:39344483-39344502 | Msa0680300:CDS | 35.0% | |
| TCTTGAATGAGATGGTAGAT+TGG | - | chr4_4:39344655-39344674 | None:intergenic | 35.0% | |
| GAGAAAGCAAGTAGAACATT+TGG | - | chr4_4:39344735-39344754 | None:intergenic | 35.0% | |
| !! | ACCCTTCTAAAGCTCAAAAT+TGG | + | chr4_4:39344814-39344833 | Msa0680300:CDS | 35.0% |
| CAAATCTGACCTAAAAGAAC+CGG | - | chr4_4:39345060-39345079 | None:intergenic | 35.0% | |
| TATGCTGCAATCAAAGTGAT+AGG | + | chr4_4:39345284-39345303 | Msa0680300:CDS | 35.0% | |
| ATGCTGCAATCAAAGTGATA+GGG | + | chr4_4:39345285-39345304 | Msa0680300:CDS | 35.0% | |
| AGAAGAATTGAGGAAAGACA+TGG | + | chr4_4:39345419-39345438 | Msa0680300:CDS | 35.0% | |
| ! | TTATAAACTGGTCTACCATC+AGG | - | chr4_4:39345551-39345570 | None:intergenic | 35.0% |
| GGTAGACCAGTTTATAACAT+TGG | + | chr4_4:39345554-39345573 | Msa0680300:CDS | 35.0% | |
| ACAAGGTTATCTACCACAAA+TGG | + | chr4_4:39345580-39345599 | Msa0680300:CDS | 35.0% | |
| TTAAAAAACGTGCACACCAT+CGG | - | chr4_4:39345669-39345688 | None:intergenic | 35.0% | |
| !! | TCTAGTCTTGAAAACATGGT+TGG | + | chr4_4:39344269-39344288 | Msa0680300:five_prime_UTR | 35.0% |
| ATACTTTAATGAGGAGGAAG+AGG | - | chr4_4:39344304-39344323 | None:intergenic | 35.0% | |
| GGATTAATAATGTGTGAGTG+TGG | - | chr4_4:39344358-39344377 | None:intergenic | 35.0% | |
| TTCTTTCTTCTCACCATATC+AGG | + | chr4_4:39344483-39344502 | Msa0680300:CDS | 35.0% | |
| TCTTGAATGAGATGGTAGAT+TGG | - | chr4_4:39344655-39344674 | None:intergenic | 35.0% | |
| GAGAAAGCAAGTAGAACATT+TGG | - | chr4_4:39344735-39344754 | None:intergenic | 35.0% | |
| !! | ACCCTTCTAAAGCTCAAAAT+TGG | + | chr4_4:39344814-39344833 | Msa0680300:CDS | 35.0% |
| CAAATCTGACCTAAAAGAAC+CGG | - | chr4_4:39345060-39345079 | None:intergenic | 35.0% | |
| TATGCTGCAATCAAAGTGAT+AGG | + | chr4_4:39345284-39345303 | Msa0680300:CDS | 35.0% | |
| ATGCTGCAATCAAAGTGATA+GGG | + | chr4_4:39345285-39345304 | Msa0680300:CDS | 35.0% | |
| AGAAGAATTGAGGAAAGACA+TGG | + | chr4_4:39345419-39345438 | Msa0680300:CDS | 35.0% | |
| ! | TTATAAACTGGTCTACCATC+AGG | - | chr4_4:39345551-39345570 | None:intergenic | 35.0% |
| GGTAGACCAGTTTATAACAT+TGG | + | chr4_4:39345554-39345573 | Msa0680300:CDS | 35.0% | |
| ACAAGGTTATCTACCACAAA+TGG | + | chr4_4:39345580-39345599 | Msa0680300:CDS | 35.0% | |
| TTAAAAAACGTGCACACCAT+CGG | - | chr4_4:39345669-39345688 | None:intergenic | 35.0% | |
| TTTAATGAGGAGGAAGAGGA+GGG | - | chr4_4:39344300-39344319 | None:intergenic | 40.0% | |
| AAAGTGAGGTGATGCAAAGT+TGG | - | chr4_4:39344379-39344398 | None:intergenic | 40.0% | |
| ATATCTAGGCACAGAAAGTG+AGG | - | chr4_4:39344393-39344412 | None:intergenic | 40.0% | |
| ACAGCAACTCTTGAATGAGA+TGG | - | chr4_4:39344663-39344682 | None:intergenic | 40.0% | |
| GGATCGACTAAACCTTCATT+TGG | - | chr4_4:39345212-39345231 | None:intergenic | 40.0% | |
| !! | GAAGTTAAGGTTTCTGAGAC+AGG | + | chr4_4:39345320-39345339 | Msa0680300:CDS | 40.0% |
| !! | TTAAGGTTTCTGAGACAGGT+TGG | + | chr4_4:39345324-39345343 | Msa0680300:CDS | 40.0% |
| TGGTGTAGCACCAATTTCAT+CGG | - | chr4_4:39345366-39345385 | None:intergenic | 40.0% | |
| ! | ATTGGAACCAATGGATTTCC+AGG | - | chr4_4:39345449-39345468 | None:intergenic | 40.0% |
| !! | CCATAGTTTCTTTCTGAAGC+AGG | - | chr4_4:39345518-39345537 | None:intergenic | 40.0% |
| CCTGCTTCAGAAAGAAACTA+TGG | + | chr4_4:39345515-39345534 | Msa0680300:CDS | 40.0% | |
| ! | TCACATCTCGGAGATGTTTT+AGG | - | chr4_4:39345720-39345739 | None:intergenic | 40.0% |
| ACCTGCATCAAATCACATCT+CGG | - | chr4_4:39345732-39345751 | None:intergenic | 40.0% | |
| !! | TGATCTTTGCTTTAGAGGTG+AGG | + | chr4_4:39345929-39345948 | Msa0680300:CDS | 40.0% |
| !! | GATCTTTGCTTTAGAGGTGA+GGG | + | chr4_4:39345930-39345949 | Msa0680300:CDS | 40.0% |
| GAGGTGAGGGAATATTCAAA+TGG | + | chr4_4:39345943-39345962 | Msa0680300:CDS | 40.0% | |
| !! | TTCCTTGCAATTTTTGGGCA+AGG | + | chr4_4:39345997-39346016 | Msa0680300:three_prime_UTR | 40.0% |
| CAGTATTCATATGATCCACG+TGG | - | chr4_4:39346067-39346086 | None:intergenic | 40.0% | |
| CACGTGGATCATATGAATAC+TGG | + | chr4_4:39346065-39346084 | Msa0680300:three_prime_UTR | 40.0% | |
| TTTAATGAGGAGGAAGAGGA+GGG | - | chr4_4:39344300-39344319 | None:intergenic | 40.0% | |
| AAAGTGAGGTGATGCAAAGT+TGG | - | chr4_4:39344379-39344398 | None:intergenic | 40.0% | |
| ATATCTAGGCACAGAAAGTG+AGG | - | chr4_4:39344393-39344412 | None:intergenic | 40.0% | |
| ACAGCAACTCTTGAATGAGA+TGG | - | chr4_4:39344663-39344682 | None:intergenic | 40.0% | |
| GGATCGACTAAACCTTCATT+TGG | - | chr4_4:39345212-39345231 | None:intergenic | 40.0% | |
| !! | GAAGTTAAGGTTTCTGAGAC+AGG | + | chr4_4:39345320-39345339 | Msa0680300:CDS | 40.0% |
| !! | TTAAGGTTTCTGAGACAGGT+TGG | + | chr4_4:39345324-39345343 | Msa0680300:CDS | 40.0% |
| TGGTGTAGCACCAATTTCAT+CGG | - | chr4_4:39345366-39345385 | None:intergenic | 40.0% | |
| ! | ATTGGAACCAATGGATTTCC+AGG | - | chr4_4:39345449-39345468 | None:intergenic | 40.0% |
| !! | CCATAGTTTCTTTCTGAAGC+AGG | - | chr4_4:39345518-39345537 | None:intergenic | 40.0% |
| CCTGCTTCAGAAAGAAACTA+TGG | + | chr4_4:39345515-39345534 | Msa0680300:CDS | 40.0% | |
| ! | TCACATCTCGGAGATGTTTT+AGG | - | chr4_4:39345720-39345739 | None:intergenic | 40.0% |
| ACCTGCATCAAATCACATCT+CGG | - | chr4_4:39345732-39345751 | None:intergenic | 40.0% | |
| !! | TGATCTTTGCTTTAGAGGTG+AGG | + | chr4_4:39345929-39345948 | Msa0680300:CDS | 40.0% |
| !! | GATCTTTGCTTTAGAGGTGA+GGG | + | chr4_4:39345930-39345949 | Msa0680300:CDS | 40.0% |
| GAGGTGAGGGAATATTCAAA+TGG | + | chr4_4:39345943-39345962 | Msa0680300:CDS | 40.0% | |
| !! | TTCCTTGCAATTTTTGGGCA+AGG | + | chr4_4:39345997-39346016 | Msa0680300:three_prime_UTR | 40.0% |
| CAGTATTCATATGATCCACG+TGG | - | chr4_4:39346067-39346086 | None:intergenic | 40.0% | |
| CACGTGGATCATATGAATAC+TGG | + | chr4_4:39346065-39346084 | Msa0680300:three_prime_UTR | 40.0% | |
| TTAATGAGGAGGAAGAGGAG+GGG | - | chr4_4:39344299-39344318 | None:intergenic | 45.0% | |
| CTTTAATGAGGAGGAAGAGG+AGG | - | chr4_4:39344301-39344320 | None:intergenic | 45.0% | |
| AATTCTTACCCTCCTTCGTC+CGG | + | chr4_4:39345038-39345057 | Msa0680300:CDS | 45.0% | |
| TAAAAGAACCGGACGAAGGA+GGG | - | chr4_4:39345049-39345068 | None:intergenic | 45.0% | |
| TGGAACTCCTGGAAATCCAT+TGG | + | chr4_4:39345439-39345458 | Msa0680300:CDS | 45.0% | |
| !! | TTTCTTTCTGAAGCAGGACC+AGG | - | chr4_4:39345512-39345531 | None:intergenic | 45.0% |
| TTGGATGGCACAACCATTTG+TGG | - | chr4_4:39345596-39345615 | None:intergenic | 45.0% | |
| TCCGAGATGTGATTTGATGC+AGG | + | chr4_4:39345728-39345747 | Msa0680300:intron | 45.0% | |
| CACCTTGCCCAAAAATTGCA+AGG | - | chr4_4:39346002-39346021 | None:intergenic | 45.0% | |
| TTAATGAGGAGGAAGAGGAG+GGG | - | chr4_4:39344299-39344318 | None:intergenic | 45.0% | |
| CTTTAATGAGGAGGAAGAGG+AGG | - | chr4_4:39344301-39344320 | None:intergenic | 45.0% | |
| AATTCTTACCCTCCTTCGTC+CGG | + | chr4_4:39345038-39345057 | Msa0680300:CDS | 45.0% | |
| TAAAAGAACCGGACGAAGGA+GGG | - | chr4_4:39345049-39345068 | None:intergenic | 45.0% | |
| TGGAACTCCTGGAAATCCAT+TGG | + | chr4_4:39345439-39345458 | Msa0680300:CDS | 45.0% | |
| !! | TTTCTTTCTGAAGCAGGACC+AGG | - | chr4_4:39345512-39345531 | None:intergenic | 45.0% |
| TTGGATGGCACAACCATTTG+TGG | - | chr4_4:39345596-39345615 | None:intergenic | 45.0% | |
| TCCGAGATGTGATTTGATGC+AGG | + | chr4_4:39345728-39345747 | Msa0680300:intron | 45.0% | |
| CACCTTGCCCAAAAATTGCA+AGG | - | chr4_4:39346002-39346021 | None:intergenic | 45.0% | |
| CTAAAAGAACCGGACGAAGG+AGG | - | chr4_4:39345050-39345069 | None:intergenic | 50.0% | |
| ! | CTCCTTCGTCCGGTTCTTTT+AGG | + | chr4_4:39345048-39345067 | Msa0680300:CDS | 50.0% |
| GACCTAAAAGAACCGGACGA+AGG | - | chr4_4:39345053-39345072 | None:intergenic | 50.0% | |
| !! | GAGACAGGTTGGCCTTCAAA+TGG | + | chr4_4:39345335-39345354 | Msa0680300:CDS | 50.0% |
| AATGGCGACGCCGATGAAAT+TGG | + | chr4_4:39345353-39345372 | Msa0680300:CDS | 50.0% | |
| GAGGAAAGACATGGAACTCC+TGG | + | chr4_4:39345428-39345447 | Msa0680300:CDS | 50.0% | |
| CTAAAAGAACCGGACGAAGG+AGG | - | chr4_4:39345050-39345069 | None:intergenic | 50.0% | |
| ! | CTCCTTCGTCCGGTTCTTTT+AGG | + | chr4_4:39345048-39345067 | Msa0680300:CDS | 50.0% |
| GACCTAAAAGAACCGGACGA+AGG | - | chr4_4:39345053-39345072 | None:intergenic | 50.0% | |
| !! | GAGACAGGTTGGCCTTCAAA+TGG | + | chr4_4:39345335-39345354 | Msa0680300:CDS | 50.0% |
| AATGGCGACGCCGATGAAAT+TGG | + | chr4_4:39345353-39345372 | Msa0680300:CDS | 50.0% | |
| GAGGAAAGACATGGAACTCC+TGG | + | chr4_4:39345428-39345447 | Msa0680300:CDS | 50.0% | |
| TCATCGGCGTCGCCATTTGA+AGG | - | chr4_4:39345350-39345369 | None:intergenic | 55.0% | |
| TCATCGGCGTCGCCATTTGA+AGG | - | chr4_4:39345350-39345369 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 39344208 | 39346129 | 39344208 | ID=Msa0680300;Name=Msa0680300 |
| chr4_4 | mRNA | 39344208 | 39346129 | 39344208 | ID=Msa0680300-mRNA-1;Parent=Msa0680300;Name=Msa0680300-mRNA-1;_AED=0.03;_eAED=0.03;_QI=242|1|1|1|1|0.66|3|157|388 |
| chr4_4 | exon | 39344208 | 39344504 | 39344208 | ID=Msa0680300-mRNA-1:exon:9251;Parent=Msa0680300-mRNA-1 |
| chr4_4 | exon | 39344595 | 39345622 | 39344595 | ID=Msa0680300-mRNA-1:exon:9252;Parent=Msa0680300-mRNA-1 |
| chr4_4 | exon | 39345889 | 39346129 | 39345889 | ID=Msa0680300-mRNA-1:exon:9253;Parent=Msa0680300-mRNA-1 |
| chr4_4 | five_prime_UTR | 39344208 | 39344449 | 39344208 | ID=Msa0680300-mRNA-1:five_prime_utr;Parent=Msa0680300-mRNA-1 |
| chr4_4 | CDS | 39344450 | 39344504 | 39344450 | ID=Msa0680300-mRNA-1:cds;Parent=Msa0680300-mRNA-1 |
| chr4_4 | CDS | 39344595 | 39345622 | 39344595 | ID=Msa0680300-mRNA-1:cds;Parent=Msa0680300-mRNA-1 |
| chr4_4 | CDS | 39345889 | 39345972 | 39345889 | ID=Msa0680300-mRNA-1:cds;Parent=Msa0680300-mRNA-1 |
| chr4_4 | three_prime_UTR | 39345973 | 39346129 | 39345973 | ID=Msa0680300-mRNA-1:three_prime_utr;Parent=Msa0680300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
