AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0864340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0864340 MtrunA17_Chr5g0446601 87.166 187 19 3 225 411 10 191 9.69e-90 269
Msa0864340 MtrunA17_Chr2g0282991 46.205 303 54 7 30 228 950 1247 2.76e-63 220
Msa0864340 MtrunA17_Chr2g0282921 51.049 143 25 1 53 150 28 170 6.01e-37 132
Msa0864340 MtrunA17_Chr3g0084971 40.611 229 75 4 57 225 1013 1240 1.08e-36 142
Msa0864340 MtrunA17_Chr3g0084971 32.086 187 106 7 30 204 946 1123 8.43e-12 67.4
Msa0864340 MtrunA17_Chr5g0446561 79.048 105 14 3 307 411 1 97 1.06e-24 97.4
Msa0864340 MtrunA17_Chr8g0352861 32.569 218 88 4 66 225 1020 1236 2.67e-24 105
Msa0864340 MtrunA17_Chr4g0076381 45.370 108 55 1 227 330 46 153 9.50e-22 93.6
Msa0864340 MtrunA17_Chr1g0165041 43.220 118 57 2 232 342 2 116 1.07e-21 92.0
Msa0864340 MtrunA17_Chr4g0076321 46.602 103 50 2 228 328 9 108 3.54e-21 89.0
Msa0864340 MtrunA17_Chr1g0191981 46.739 92 49 0 236 327 1 92 1.60e-20 86.7
Msa0864340 MtrunA17_Chr4g0067091 47.253 91 48 0 238 328 21 111 3.65e-20 88.6
Msa0864340 MtrunA17_Chr3g0087701 38.798 183 95 6 56 225 958 1136 4.89e-20 92.8
Msa0864340 MtrunA17_Chr3g0102351 46.667 90 48 0 239 328 27 116 1.10e-19 86.3
Msa0864340 MtrunA17_Chr5g0446491 46.667 90 48 0 239 328 23 112 1.26e-19 85.9
Msa0864340 MtrunA17_Chr3g0082131 35.196 179 88 5 74 226 1029 1205 3.05e-19 90.5
Msa0864340 MtrunA17_Chr2g0296321 45.055 91 50 0 238 328 65 155 3.71e-19 86.7
Msa0864340 MtrunA17_Chr2g0290491 45.556 90 49 0 239 328 17 106 5.47e-19 83.6
Msa0864340 MtrunA17_Chr1g0185911 41.237 97 57 0 232 328 22 118 6.81e-19 83.6
Msa0864340 MtrunA17_Chr8g0382931 43.750 96 51 1 233 328 25 117 1.07e-18 84.0
Msa0864340 MtrunA17_Chr8g0352831 29.956 227 100 5 57 226 1014 1238 1.32e-18 88.6
Msa0864340 MtrunA17_Chr2g0299151 28.692 237 109 5 48 226 985 1219 1.38e-18 88.6
Msa0864340 MtrunA17_Chr3g0085331 37.017 181 96 7 56 222 1069 1245 2.31e-18 87.8
Msa0864340 MtrunA17_Chr1g0195851 42.424 99 57 0 230 328 27 125 1.35e-17 80.5
Msa0864340 MtrunA17_Chr7g0263601 42.553 94 50 1 239 328 26 119 2.28e-17 79.3
Msa0864340 MtrunA17_Chr3g0087731 36.066 183 100 7 56 225 701 879 3.11e-17 84.0
Msa0864340 MtrunA17_Chr8g0384451 34.821 112 73 0 217 328 18 129 4.42e-17 79.7
Msa0864340 MtrunA17_Chr3g0084081 37.778 180 95 6 56 222 969 1144 4.71e-17 83.6
Msa0864340 MtrunA17_Chr3g0089611 35.294 187 108 6 50 230 101 280 2.88e-16 78.6
Msa0864340 MtrunA17_Chr3g0085471 35.681 213 112 10 26 222 1070 1273 4.13e-16 80.9
Msa0864340 MtrunA17_Chr3g0086161 34.392 189 106 7 56 230 957 1141 4.49e-16 80.5
Msa0864340 MtrunA17_Chr3g0089511 35.294 187 108 6 50 230 216 395 5.39e-16 79.3
Msa0864340 MtrunA17_Chr3g0086621 35.870 184 100 7 56 225 955 1134 6.47e-16 80.1
Msa0864340 MtrunA17_Chr3g0084031 36.111 180 98 6 56 222 973 1148 2.67e-15 78.2
Msa0864340 MtrunA17_Chr3g0085791 35.912 181 98 7 56 222 104 280 3.35e-15 75.9
Msa0864340 MtrunA17_Chr3g0086091 36.464 181 97 7 56 222 769 945 6.86e-15 77.0
Msa0864340 MtrunA17_Chr3g0085621 34.375 192 105 9 56 230 83 270 7.47e-15 74.3
Msa0864340 MtrunA17_Chr3g0087581 36.111 180 97 7 56 221 958 1133 8.21e-15 76.6
Msa0864340 MtrunA17_Chr3g0113741 29.897 194 77 5 87 222 215 407 1.44e-14 75.1
Msa0864340 MtrunA17_Chr3g0113801 29.897 194 77 5 87 222 251 443 2.08e-14 74.7
Msa0864340 MtrunA17_Chr3g0113511 29.897 194 77 5 87 222 215 407 2.89e-14 73.9
Msa0864340 MtrunA17_Chr3g0085171 34.444 180 101 6 56 222 954 1129 5.19e-14 74.3
Msa0864340 MtrunA17_Chr3g0083641 32.749 171 100 5 41 198 905 1073 1.15e-13 73.2
Msa0864340 MtrunA17_Chr3g0089251 34.078 179 91 7 50 225 1182 1336 1.54e-13 72.8
Msa0864340 MtrunA17_Chr3g0086221 34.807 181 100 7 56 222 957 1133 2.39e-13 72.0
Msa0864340 MtrunA17_Chr3g0089991 34.641 153 92 2 79 225 1118 1268 3.04e-13 72.0
Msa0864340 MtrunA17_Chr3g0085651 38.816 152 75 7 56 193 1187 1334 3.49e-13 71.6
Msa0864340 MtrunA17_Chr3g0085521 33.333 180 103 6 56 222 958 1133 4.93e-13 71.2
Msa0864340 MtrunA17_Chr3g0085131 37.079 178 99 7 56 222 955 1130 5.29e-13 71.2
Msa0864340 MtrunA17_Chr3g0085751 34.807 181 105 6 56 225 961 1139 5.44e-13 71.2
Msa0864340 MtrunA17_Chr3g0084051 35.000 180 99 7 56 222 966 1140 7.96e-13 70.5
Msa0864340 MtrunA17_Chr3g0085091 32.787 183 106 6 56 225 969 1147 6.45e-12 67.8
Msa0864340 MtrunA17_Chr3g0083681 31.579 171 102 5 41 198 904 1072 6.88e-12 67.8
Msa0864340 MtrunA17_Chr3g0085701 32.778 180 104 6 56 222 770 945 7.81e-12 67.4
Msa0864340 MtrunA17_Chr8g0356251 33.129 163 95 5 48 198 971 1131 9.56e-12 67.0
Msa0864340 MtrunA17_Chr3g0085711 33.333 180 103 6 56 222 533 708 1.27e-11 66.6
Msa0864340 MtrunA17_Chr1g0159291 36.986 73 46 0 245 317 8 80 2.85e-11 59.7
Msa0864340 MtrunA17_Chr1g0164581 34.731 167 88 7 48 198 926 1087 3.00e-11 65.5
Msa0864340 MtrunA17_Chr3g0085161 35.393 178 102 6 56 222 827 1002 3.78e-11 65.1
Msa0864340 MtrunA17_Chr4g0008461 32.317 164 96 5 48 198 917 1078 9.71e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0864340 AT1G21970.1 45.794 107 54 1 236 338 56 162 1.92e-22 95.9
Msa0864340 AT5G47670.2 45.794 107 51 2 228 330 21 124 1.26e-21 92.4
Msa0864340 AT5G47670.1 45.794 107 51 2 228 330 50 153 2.30e-21 92.8
Msa0864340 AT5G47670.3 45.794 107 51 2 228 330 50 153 2.30e-21 92.8
Msa0864340 AT5G47640.1 48.889 90 46 0 239 328 27 116 3.30e-20 88.2
Msa0864340 AT4G14540.1 45.361 97 50 1 232 328 17 110 7.18e-20 86.7
Msa0864340 AT2G47810.1 41.748 103 60 0 225 327 37 139 1.31e-19 85.9
Msa0864340 AT2G38880.2 40.351 114 62 3 227 336 11 122 8.13e-19 82.8
Msa0864340 AT2G38880.1 40.351 114 62 3 227 336 11 122 8.13e-19 82.8
Msa0864340 AT2G38880.5 40.351 114 62 3 227 336 11 122 8.13e-19 82.8
Msa0864340 AT2G38880.3 40.351 114 62 3 227 336 11 122 8.75e-19 82.8
Msa0864340 AT1G09030.1 44.444 90 50 0 242 331 6 95 2.02e-18 81.6
Msa0864340 AT2G38880.11 42.308 104 54 3 227 326 11 112 3.46e-18 82.0
Msa0864340 AT2G38880.8 42.308 104 54 3 227 326 11 112 3.46e-18 82.0
Msa0864340 AT2G38880.7 39.815 108 63 2 227 334 11 116 6.37e-18 80.5
Msa0864340 AT2G37060.2 39.423 104 59 1 239 338 30 133 7.95e-18 81.3
Msa0864340 AT2G37060.3 39.423 104 59 1 239 338 30 133 7.95e-18 81.3
Msa0864340 AT2G37060.1 39.423 104 59 1 239 338 30 133 7.95e-18 81.3
Msa0864340 AT3G53340.5 41.000 100 55 1 239 334 29 128 1.13e-17 80.9
Msa0864340 AT3G53340.1 41.000 100 55 1 239 334 29 128 1.13e-17 80.9
Msa0864340 AT2G38880.4 41.176 102 58 2 227 328 11 110 1.36e-17 78.6
Msa0864340 AT3G53340.4 40.404 99 59 0 230 328 20 118 3.04e-17 77.8
Msa0864340 AT2G38880.9 41.176 102 58 2 227 328 11 110 3.51e-17 78.6
Msa0864340 AT2G38880.10 41.176 102 58 2 227 328 11 110 3.51e-17 78.6
Msa0864340 AT2G38880.6 41.176 102 58 2 227 328 11 110 3.51e-17 78.6
Msa0864340 AT3G53340.3 42.857 91 48 1 239 325 29 119 7.57e-17 77.8
Msa0864340 AT3G53340.2 42.857 91 48 1 239 325 29 119 7.57e-17 77.8
Msa0864340 AT2G13570.1 40.659 91 54 0 238 328 35 125 1.44e-15 75.9
Msa0864340 AT3G14460.1 32.370 173 102 5 48 207 1132 1302 2.89e-13 72.4

Find 107 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTCTGATGTGGGAAATTT+TGG 0.083199 5_4:-64669287 None:intergenic
TCTGGAAACATCTCAATATT+TGG 0.102548 5_4:-64668878 None:intergenic
TCTTGGGAATGATACAAATT+TGG 0.113172 5_4:-64668732 None:intergenic
GTTAATTACTATGCACAAAT+TGG 0.166101 5_4:+64674591 Msa0864340:CDS
GGGTCGGCAAACACGAAATT+TGG 0.209781 5_4:-64674763 None:intergenic
ATTATTGCAAGTTAGATTAT+AGG 0.238725 5_4:+64674545 Msa0864340:CDS
GGTGGAGGTGGAGGTGGAGG+TGG 0.244787 5_4:-64674694 None:intergenic
CTTGGGAATGATACAAATTT+GGG 0.269574 5_4:-64668731 None:intergenic
GGAGGTGGAGGTGGAGGTGG+GGG 0.276683 5_4:-64674691 None:intergenic
TCGGTTATCTTTGCATGTTT+TGG 0.290287 5_4:-64674454 None:intergenic
TCCATCTCATCTTTCCGTTT+TGG 0.295521 5_4:+64667797 Msa0864340:CDS
TTCCCACATCAGAGCCATTA+TGG 0.295906 5_4:+64669294 Msa0864340:CDS
GCATGAAACACCCACAAATA+TGG 0.305069 5_4:+64669263 Msa0864340:CDS
TGCAGGCATTGGAGTGCATT+GGG 0.316063 5_4:+64669104 Msa0864340:intron
TATAATCTAACTTGCAATAA+TGG 0.324070 5_4:-64674543 None:intergenic
CGATGAAAGCAAGGAAATTA+TGG 0.324481 5_4:+64674474 Msa0864340:CDS
GTGGAGGTGGAGGTGGAGGT+GGG 0.327374 5_4:-64674693 None:intergenic
CATGCAGATGACTTTGCTTT+GGG 0.328650 5_4:-64668541 None:intergenic
CTGGAAACATCTCAATATTT+GGG 0.332085 5_4:-64668877 None:intergenic
TGGAGGTGGAGGTGGAGGTG+GGG 0.332226 5_4:-64674692 None:intergenic
TCCTGTGGCAGCGGCGGTGG+TGG 0.345867 5_4:-64674712 None:intergenic
CTGTCCCAAGCTGGAGACTA+TGG 0.347374 5_4:+64669168 Msa0864340:CDS
TCATGCAGATGACTTTGCTT+TGG 0.347510 5_4:-64668542 None:intergenic
TTTGCACATCGTTTAACTTT+GGG 0.354735 5_4:-64668844 None:intergenic
TGATGGAAGCTTTGATGTTA+TGG 0.360298 5_4:+64674873 Msa0864340:CDS
AGCGGCGGTGGTGGAGGTGG+AGG 0.366916 5_4:-64674703 None:intergenic
TCGTGATTGTCCAAGATTAC+AGG 0.378519 5_4:+64667767 Msa0864340:CDS
TATGATGGACAACCTCTCTA+AGG 0.379028 5_4:-64668498 None:intergenic
ATTTGCACATCGTTTAACTT+TGG 0.380207 5_4:-64668845 None:intergenic
TGTGGCAGCGGCGGTGGTGG+AGG 0.383001 5_4:-64674709 None:intergenic
GGCGGTGGTGGAGGTGGAGG+TGG 0.387585 5_4:-64674700 None:intergenic
GGTGGTGGAGGTGGAGGTGG+AGG 0.387641 5_4:-64674697 None:intergenic
GGCAGCGGCGGTGGTGGAGG+TGG 0.396026 5_4:-64674706 None:intergenic
GGAAAATCTCCCTGTAATCT+TGG 0.396803 5_4:-64667777 None:intergenic
AGTCTTCAATTGTTAATTGT+TGG 0.396870 5_4:-64669147 None:intergenic
GGCGCAGACAATCCTTCTCT+TGG 0.397488 5_4:-64668749 None:intergenic
GTTTGCCGACCCAACAGAAA+TGG 0.398478 5_4:+64674774 Msa0864340:CDS
AGAGAACTTGGTGGTGGTGG+TGG 0.403731 5_4:+64674832 Msa0864340:CDS
AATTGTTGAATGTCCTTTGT+TGG 0.416979 5_4:+64669228 Msa0864340:CDS
ATGTGCAATTGTTTCAAGTT+GGG 0.426644 5_4:-64668770 None:intergenic
TTAATTACTATGCACAAATT+GGG 0.437018 5_4:+64674592 Msa0864340:CDS
GGACAACCTCTCTAAGGATA+AGG 0.438833 5_4:-64668492 None:intergenic
TAGATTCCTAAAATTTATGA+TGG 0.439676 5_4:-64668513 None:intergenic
CATAATTTCCTTGCTTTCAT+CGG 0.441388 5_4:-64674473 None:intergenic
CCTTCCATAGTCTCCAGCTT+GGG 0.442476 5_4:-64669172 None:intergenic
AAATCCTGTGGCAGCGGCGG+TGG 0.452920 5_4:-64674715 None:intergenic
TCCTTCCATAGTCTCCAGCT+TGG 0.459510 5_4:-64669173 None:intergenic
CTGCAGGCATTGGAGTGCAT+TGG 0.459598 5_4:+64669103 Msa0864340:intron
TTAGGTATCTTCGTATAGAT+AGG 0.461166 5_4:+64668570 Msa0864340:CDS
ACACGAAATTTGGATCCAAC+GGG 0.476879 5_4:-64674753 None:intergenic
GCGCAGACAATCCTTCTCTT+GGG 0.482964 5_4:-64668748 None:intergenic
AAAATTGCACCCATTTCTGT+TGG 0.484335 5_4:-64674784 None:intergenic
AAATTGCACCCATTTCTGTT+GGG 0.484803 5_4:-64674783 None:intergenic
TGCACCCATTTCTGTTGGGT+CGG 0.488038 5_4:-64674779 None:intergenic
TCCACCACCGCCGCTGCCAC+AGG 0.490461 5_4:+64674711 Msa0864340:CDS
AACCTATGCACATTGGCAAT+GGG 0.490722 5_4:-64674415 None:intergenic
ATTGATCGATGCAACTTGCT+TGG 0.491439 5_4:+64667831 Msa0864340:CDS
CTTCAATTGTTAATTGTTGG+AGG 0.491774 5_4:-64669144 None:intergenic
TTTGCCGACCCAACAGAAAT+GGG 0.492390 5_4:+64674775 Msa0864340:CDS
GACAACCTCTCTAAGGATAA+GGG 0.492604 5_4:-64668491 None:intergenic
ATCTAACTTGCAATAATGGT+TGG 0.494716 5_4:-64674539 None:intergenic
CAACCTATGCACATTGGCAA+TGG 0.501218 5_4:-64674416 None:intergenic
GTCATCTGCATGAGTCCCTT+AGG 0.508569 5_4:+64668552 Msa0864340:CDS
ATCTCAAGATATTTAAGTAC+AGG 0.512692 5_4:-64667744 None:intergenic
AACACGAAATTTGGATCCAA+CGG 0.514761 5_4:-64674754 None:intergenic
TTTGTATCATTCCCAAGAGA+AGG 0.517468 5_4:+64668737 Msa0864340:CDS
TTTCGTGATCGTGCTCGTGT+AGG 0.519395 5_4:+64674658 Msa0864340:CDS
GATAGAGAACTTGGTGGTGG+TGG 0.519708 5_4:+64674829 Msa0864340:CDS
TTCAATTGTTAATTGTTGGA+GGG 0.520897 5_4:-64669143 None:intergenic
TCCAAAACGGAAAGATGAGA+TGG 0.524323 5_4:-64667798 None:intergenic
AATTGAAGACTGTCCCAAGC+TGG 0.526443 5_4:+64669159 Msa0864340:CDS
TATCTATACGAAGATACCTA+AGG 0.534263 5_4:-64668568 None:intergenic
TTCCCATTGCCAATGTGCAT+AGG 0.538760 5_4:+64674413 Msa0864340:CDS
CAACCATAATGGCTCTGATG+TGG 0.540921 5_4:-64669297 None:intergenic
GATGATGATGATAGAGAACT+TGG 0.547404 5_4:+64674820 Msa0864340:CDS
CGTGATTGTCCAAGATTACA+GGG 0.548026 5_4:+64667768 Msa0864340:CDS
GATGTGCAATTGTTTCAAGT+TGG 0.548878 5_4:-64668771 None:intergenic
GAGTGCAAGCAGCTAGTTCG+AGG 0.550758 5_4:+64674365 Msa0864340:CDS
CATTAGCTTTGTTACTGCTG+AGG 0.551315 5_4:+64674516 Msa0864340:CDS
ATGCACATTGGCAATGGGAA+AGG 0.555667 5_4:-64674410 None:intergenic
ATATTTGTGGGTGTTTCATG+CGG 0.558835 5_4:-64669261 None:intergenic
TCAAGCTCATAATTTCCCGT+TGG 0.560346 5_4:+64674738 Msa0864340:CDS
TATTGAGATGTTTCCAGAAG+GGG 0.561012 5_4:+64668883 Msa0864340:CDS
AATGTCCTTTGTTGGAAGAA+CGG 0.563868 5_4:+64669236 Msa0864340:CDS
TGAAAATCCTGTGGCAGCGG+CGG 0.568284 5_4:-64674718 None:intergenic
TGGAGACTATGGAAGGAGAA+AGG 0.570998 5_4:+64669179 Msa0864340:CDS
ATATTGAGATGTTTCCAGAA+GGG 0.573021 5_4:+64668882 Msa0864340:CDS
TTAATTGTTGGAGGGACTTG+AGG 0.583772 5_4:-64669135 None:intergenic
TTTCATCAACCTATGCACAT+TGG 0.585530 5_4:-64674422 None:intergenic
ATTGTTGGAGGGACTTGAGG+TGG 0.591392 5_4:-64669132 None:intergenic
GCTTGAAAATCCTGTGGCAG+CGG 0.592551 5_4:-64674721 None:intergenic
AACCATAATGGCTCTGATGT+GGG 0.596834 5_4:-64669296 None:intergenic
ATCTATACGAAGATACCTAA+GGG 0.599475 5_4:-64668567 None:intergenic
AAAGATAACCGATGAAAGCA+AGG 0.604899 5_4:+64674465 Msa0864340:CDS
GATGATGATAGAGAACTTGG+TGG 0.615654 5_4:+64674823 Msa0864340:CDS
GGTGATGGCAACTCAAGTGA+TGG 0.623580 5_4:+64674856 Msa0864340:CDS
AATATTGAGATGTTTCCAGA+AGG 0.624093 5_4:+64668881 Msa0864340:CDS
CCCAAGCTGGAGACTATGGA+AGG 0.625250 5_4:+64669172 Msa0864340:CDS
ATTGAGATGTTTCCAGAAGG+GGG 0.631507 5_4:+64668884 Msa0864340:CDS
TCTGGGAAACGAAACTGCAG+AGG 0.641366 5_4:-64668458 None:intergenic
CGGCACCGTTCTTCCAACAA+AGG 0.641717 5_4:-64669241 None:intergenic
AGAAGAGTATTTACATGACA+AGG 0.656225 5_4:-64668821 None:intergenic
GATGATAGAGAACTTGGTGG+TGG 0.661700 5_4:+64674826 Msa0864340:CDS
TTATGAGCTTGAAAATCCTG+TGG 0.676989 5_4:-64674727 None:intergenic
TTGGGAATGATACAAATTTG+GGG 0.677652 5_4:-64668730 None:intergenic
AGTGCAAGCAGCTAGTTCGA+GGG 0.693334 5_4:+64674366 Msa0864340:CDS
CAAAGTGATCTCAAACTACG+CGG 0.738425 5_4:-64668911 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATCGTAAAATTAATAA+TGG - chr5_4:64669377-64669396 None:intergenic 10.0%
!!! GTATTTTTTTTTAATTTGTT+TGG + chr5_4:64670200-64670219 Msa0864340:intron 10.0%
!!! CTATTTTTTGAAATTTTAAT+TGG + chr5_4:64671659-64671678 Msa0864340:intron 10.0%
!!! TTTTTCTTTTTTTTTAAGAA+CGG + chr5_4:64671928-64671947 Msa0864340:intron 10.0%
!!! CAAATACATATATTTAATTT+TGG - chr5_4:64671994-64672013 None:intergenic 10.0%
!! CAAAATTAAATATATGTATT+TGG + chr5_4:64671992-64672011 Msa0864340:intron 10.0%
!!! AATTTGCTTATTTTTATTTA+AGG - chr5_4:64672175-64672194 None:intergenic 10.0%
!!! TGAATAGTATAATTTTTTTA+AGG + chr5_4:64672559-64672578 Msa0864340:intron 10.0%
!!! GATAAAAAAATTTATTTTCT+TGG - chr5_4:64673601-64673620 None:intergenic 10.0%
!! TTTCAAATATGTATAAATCA+CGG - chr5_4:64667884-64667903 None:intergenic 15.0%
!! AATTTGTAATAGATATTGAT+GGG - chr5_4:64668420-64668439 None:intergenic 15.0%
!! AAATTTGTAATAGATATTGA+TGG - chr5_4:64668421-64668440 None:intergenic 15.0%
!! ATCAATATCTATTACAAATT+TGG + chr5_4:64668420-64668439 Msa0864340:intron 15.0%
!! ATTAACTCAAATTGAATATA+GGG - chr5_4:64669599-64669618 None:intergenic 15.0%
!! AATTAACTCAAATTGAATAT+AGG - chr5_4:64669600-64669619 None:intergenic 15.0%
!!! ATATTCAATTTGAGTTAATT+AGG + chr5_4:64669600-64669619 Msa0864340:intron 15.0%
!!! GAAAACAAACATATTATTTT+TGG + chr5_4:64670343-64670362 Msa0864340:intron 15.0%
!!! ATTTTTTTTGGTTTAAACTT+TGG - chr5_4:64670636-64670655 None:intergenic 15.0%
!!! CCAAAATTTTGTATTTTTTT+TGG - chr5_4:64670648-64670667 None:intergenic 15.0%
!!! CCAAAAAAAATACAAAATTT+TGG + chr5_4:64670645-64670664 Msa0864340:intron 15.0%
!! CATTCAATTAATAATGTATA+TGG - chr5_4:64670981-64671000 None:intergenic 15.0%
!! AAAAATAGATTTCTTTATTG+TGG - chr5_4:64671647-64671666 None:intergenic 15.0%
!! ATCTTTATAGTAATTATTGA+CGG + chr5_4:64672143-64672162 Msa0864340:intron 15.0%
!!! TTCTTAGATGTTTTTTTTTT+TGG + chr5_4:64672193-64672212 Msa0864340:intron 15.0%
!!! ATTTTTTTAAGGTCATATTT+TGG + chr5_4:64672570-64672589 Msa0864340:intron 15.0%
!! TTATTAATGAAATTTGAAGA+GGG - chr5_4:64673109-64673128 None:intergenic 15.0%
!! ATTATTAATGAAATTTGAAG+AGG - chr5_4:64673110-64673129 None:intergenic 15.0%
!!! AATTTAAAATGTAAATCATC+TGG - chr5_4:64673177-64673196 None:intergenic 15.0%
!!! ATGTGTTTTAATTTTATTCT+AGG + chr5_4:64673290-64673309 Msa0864340:intron 15.0%
!! AAAAAGATAGTATAATTTCT+GGG - chr5_4:64673702-64673721 None:intergenic 15.0%
!! TAAAAAGATAGTATAATTTC+TGG - chr5_4:64673703-64673722 None:intergenic 15.0%
!!! CAGAAATAAATGTTTTTAAA+AGG - chr5_4:64674142-64674161 None:intergenic 15.0%
!!! AATCCTAATTTTTTCCAAAA+CGG - chr5_4:64667814-64667833 None:intergenic 20.0%
!! ATTTGTAATAGATATTGATG+GGG - chr5_4:64668419-64668438 None:intergenic 20.0%
!! TAGATTCCTAAAATTTATGA+TGG - chr5_4:64668516-64668535 None:intergenic 20.0%
!!! ATTTCAAGTTTTATTAGAGA+AGG - chr5_4:64669211-64669230 None:intergenic 20.0%
!! TTTGTGTACTACAATTAATA+GGG - chr5_4:64670033-64670052 None:intergenic 20.0%
!! AGAAAGTTTATTATCATAGT+TGG + chr5_4:64670228-64670247 Msa0864340:intron 20.0%
!! TAATAAAAAGATGTCAAATG+TGG + chr5_4:64670451-64670470 Msa0864340:intron 20.0%
!! CATATCAAATCATCAATTTA+TGG - chr5_4:64670834-64670853 None:intergenic 20.0%
!! CATTCATTAAATGATGTATA+TGG + chr5_4:64670942-64670961 Msa0864340:intron 20.0%
!! TTTCAATGAAAATTTAGTGT+AGG - chr5_4:64671156-64671175 None:intergenic 20.0%
!! CTTGTAATAAAAAAAAAGAG+AGG + chr5_4:64671432-64671451 Msa0864340:intron 20.0%
!! TCAATCCAAATTTCTTATAA+TGG + chr5_4:64671761-64671780 Msa0864340:intron 20.0%
!! CAATCCAAATTTCTTATAAT+GGG + chr5_4:64671762-64671781 Msa0864340:intron 20.0%
!! AATCCAAATTTCTTATAATG+GGG + chr5_4:64671763-64671782 Msa0864340:intron 20.0%
!!! TTGTTTATATTTTATCTCAG+AGG + chr5_4:64672050-64672069 Msa0864340:intron 20.0%
!! ATATATAATATATGCAAGGT+CGG - chr5_4:64672239-64672258 None:intergenic 20.0%
!! GACAATATATAATATATGCA+AGG - chr5_4:64672243-64672262 None:intergenic 20.0%
!! AAACTTTACATTTATGATAG+TGG - chr5_4:64672476-64672495 None:intergenic 20.0%
!!! TATTTTGGAATATTGATAAC+TGG + chr5_4:64672585-64672604 Msa0864340:intron 20.0%
!!! ATTTTGGAATATTGATAACT+GGG + chr5_4:64672586-64672605 Msa0864340:intron 20.0%
!!! TCTTTAATTTGTTTCTTGAA+TGG - chr5_4:64672699-64672718 None:intergenic 20.0%
!! GATTATATTGATACTTGTAA+TGG + chr5_4:64672962-64672981 Msa0864340:intron 20.0%
!! AGATCCATATATACATATTT+GGG - chr5_4:64673397-64673416 None:intergenic 20.0%
!! AAGATCCATATATACATATT+TGG - chr5_4:64673398-64673417 None:intergenic 20.0%
!! TATAATGGTTTACATTAGAA+AGG - chr5_4:64673837-64673856 None:intergenic 20.0%
!! AAGGTATATATACCAAAAAA+AGG - chr5_4:64674123-64674142 None:intergenic 20.0%
!! CAATAGTCGTTATATATAAT+TGG - chr5_4:64674327-64674346 None:intergenic 20.0%
!! ATTATATATAACGACTATTG+TGG + chr5_4:64674327-64674346 Msa0864340:intron 20.0%
!!! TATAATCTAACTTGCAATAA+TGG - chr5_4:64674546-64674565 None:intergenic 20.0%
!! ATTATTGCAAGTTAGATTAT+AGG + chr5_4:64674545-64674564 Msa0864340:CDS 20.0%
!! TTAATTACTATGCACAAATT+GGG + chr5_4:64674592-64674611 Msa0864340:CDS 20.0%
! ATCTCAAGATATTTAAGTAC+AGG - chr5_4:64667747-64667766 None:intergenic 25.0%
!!! TTTCCGTTTTGGAAAAAATT+AGG + chr5_4:64667808-64667827 Msa0864340:CDS 25.0%
! AAATATGTATAAATCACGGA+TGG - chr5_4:64667880-64667899 None:intergenic 25.0%
! TGATAACACATTCAATGAAA+GGG - chr5_4:64668347-64668366 None:intergenic 25.0%
!! TTGATAACACATTCAATGAA+AGG - chr5_4:64668348-64668367 None:intergenic 25.0%
! TTGAATGTGTTATCAATCAA+AGG + chr5_4:64668352-64668371 Msa0864340:intron 25.0%
! ATAAGGGTAAAAAAATCTCT+GGG - chr5_4:64668478-64668497 None:intergenic 25.0%
! GAAATTGTGAGAAATTATTG+AGG + chr5_4:64668939-64668958 Msa0864340:intron 25.0%
! TGAAAAATTCCATAGATCTA+GGG - chr5_4:64669080-64669099 None:intergenic 25.0%
! TTGAAAAATTCCATAGATCT+AGG - chr5_4:64669081-64669100 None:intergenic 25.0%
! TTCAATTGTTAATTGTTGGA+GGG - chr5_4:64669146-64669165 None:intergenic 25.0%
! AGTCTTCAATTGTTAATTGT+TGG - chr5_4:64669150-64669169 None:intergenic 25.0%
!!! ATGTTCTTTAGCTTTTTTGT+AGG + chr5_4:64669443-64669462 Msa0864340:intron 25.0%
! ACTTGTAATATGAAGAAATC+AGG + chr5_4:64669473-64669492 Msa0864340:intron 25.0%
! ATACACAGAGATAAAATGTA+TGG - chr5_4:64669765-64669784 None:intergenic 25.0%
! ATCTCTGTGTATAAAAATGT+TGG + chr5_4:64669773-64669792 Msa0864340:intron 25.0%
! TCTCTGTGTATAAAAATGTT+GGG + chr5_4:64669774-64669793 Msa0864340:intron 25.0%
! CCAATAATTAACCACAAATA+TGG - chr5_4:64669819-64669838 None:intergenic 25.0%
! CCATATTTGTGGTTAATTAT+TGG + chr5_4:64669816-64669835 Msa0864340:intron 25.0%
! TTCCATGGAAGAAAAAAAAT+CGG - chr5_4:64669880-64669899 None:intergenic 25.0%
!! ATTTTCCAATAATTGTTGTG+GGG - chr5_4:64669993-64670012 None:intergenic 25.0%
!! GATTTTCCAATAATTGTTGT+GGG - chr5_4:64669994-64670013 None:intergenic 25.0%
!! AGATTTTCCAATAATTGTTG+TGG - chr5_4:64669995-64670014 None:intergenic 25.0%
! GTTTGTGTACTACAATTAAT+AGG - chr5_4:64670034-64670053 None:intergenic 25.0%
! AGTTTATTATCATAGTTGGA+TGG + chr5_4:64670232-64670251 Msa0864340:intron 25.0%
! GAAAGAAAATGCATTAACAA+AGG - chr5_4:64670383-64670402 None:intergenic 25.0%
!!! ATGTCACTTTGTTTATGTAA+CGG - chr5_4:64670420-64670439 None:intergenic 25.0%
! ACAAGAGGTTATGTTAAATA+TGG - chr5_4:64670781-64670800 None:intergenic 25.0%
! TATTTGATCATAAGAAACTG+AGG + chr5_4:64670862-64670881 Msa0864340:intron 25.0%
!! ATTTTGCTTATAATAGTGAC+CGG - chr5_4:64670907-64670926 None:intergenic 25.0%
!!! GTGCTTATTTTCTTTAGATT+TGG + chr5_4:64671086-64671105 Msa0864340:intron 25.0%
! GAATGTAAATGCTTATAAAG+AGG + chr5_4:64671108-64671127 Msa0864340:intron 25.0%
!! TTCATTGAAATTTTGCATCT+TGG + chr5_4:64671166-64671185 Msa0864340:intron 25.0%
!!! ACTTTAGATAGAAAAGTACT+AGG - chr5_4:64671204-64671223 None:intergenic 25.0%
! AAAGTAAGCTTTCACATATT+TGG + chr5_4:64671219-64671238 Msa0864340:intron 25.0%
!! TTTTATATTGCAGCAAATTG+CGG + chr5_4:64671546-64671565 Msa0864340:intron 25.0%
! TCATACATCTTGTATGTATA+TGG + chr5_4:64671794-64671813 Msa0864340:intron 25.0%
!! TCTTTATCTGTTGAAGTTTT+TGG - chr5_4:64671831-64671850 None:intergenic 25.0%
!! ATCCATGATTAAGATTGTTT+TGG + chr5_4:64671882-64671901 Msa0864340:intron 25.0%
! TACCAAAACAATCTTAATCA+TGG - chr5_4:64671887-64671906 None:intergenic 25.0%
!!! ATGATTAAGATTGTTTTGGT+AGG + chr5_4:64671886-64671905 Msa0864340:intron 25.0%
!!! TGATTAAGATTGTTTTGGTA+GGG + chr5_4:64671887-64671906 Msa0864340:intron 25.0%
!!! GATGTTTTTTTTTTTGGTAG+TGG + chr5_4:64672199-64672218 Msa0864340:intron 25.0%
! TATATAATATATGCAAGGTC+GGG - chr5_4:64672238-64672257 None:intergenic 25.0%
! GACATATGTCTTTAAATAAG+TGG + chr5_4:64672289-64672308 Msa0864340:intron 25.0%
!! GTTTTTCTTTTTCTTTTCAG+AGG + chr5_4:64672492-64672511 Msa0864340:intron 25.0%
!!! TTTTGGAATATTGATAACTG+GGG + chr5_4:64672587-64672606 Msa0864340:intron 25.0%
! GCTTTACAAGTTTAAATCTT+TGG - chr5_4:64672817-64672836 None:intergenic 25.0%
! TCAATTCATACACACATAAT+GGG - chr5_4:64672944-64672963 None:intergenic 25.0%
! ATCAATTCATACACACATAA+TGG - chr5_4:64672945-64672964 None:intergenic 25.0%
! ATTAAAACACATACATGCTT+GGG - chr5_4:64673282-64673301 None:intergenic 25.0%
! AATTAAAACACATACATGCT+TGG - chr5_4:64673283-64673302 None:intergenic 25.0%
! ATCCATATATACATATTTGG+GGG - chr5_4:64673395-64673414 None:intergenic 25.0%
! GATCCATATATACATATTTG+GGG - chr5_4:64673396-64673415 None:intergenic 25.0%
!! ATACTATCTTTTTACCAAGA+TGG + chr5_4:64673709-64673728 Msa0864340:intron 25.0%
! ACAAGAAAAAACAGTTCAAA+AGG - chr5_4:64673742-64673761 None:intergenic 25.0%
! AACACATCTATGTTGTATAA+TGG - chr5_4:64673852-64673871 None:intergenic 25.0%
!! CAAAAAAAGGTATATATGCA+TGG - chr5_4:64674110-64674129 None:intergenic 25.0%
!!! CATGCATATATACCTTTTTT+TGG + chr5_4:64674108-64674127 Msa0864340:intron 25.0%
!! TAATTTTCTCTCACTATCAT+TGG + chr5_4:64674172-64674191 Msa0864340:intron 25.0%
! GTTAATTACTATGCACAAAT+TGG + chr5_4:64674591-64674610 Msa0864340:CDS 25.0%
! AACAAGATGCATCTTCTTTT+CGG - chr5_4:64668101-64668120 None:intergenic 30.0%
AAGATGCATCTTGTTGATAT+GGG + chr5_4:64668106-64668125 Msa0864340:intron 30.0%
GAAGGCTTATAAGAATTGTT+AGG - chr5_4:64668137-64668156 None:intergenic 30.0%
GATAACACATTCAATGAAAG+GGG - chr5_4:64668346-64668365 None:intergenic 30.0%
GATAAGGGTAAAAAAATCTC+TGG - chr5_4:64668479-64668498 None:intergenic 30.0%
! GGTTGTCCATCATAAATTTT+AGG + chr5_4:64668507-64668526 Msa0864340:CDS 30.0%
ATCTATACGAAGATACCTAA+GGG - chr5_4:64668570-64668589 None:intergenic 30.0%
TATCTATACGAAGATACCTA+AGG - chr5_4:64668571-64668590 None:intergenic 30.0%
TTAGGTATCTTCGTATAGAT+AGG + chr5_4:64668570-64668589 Msa0864340:CDS 30.0%
TTGGGAATGATACAAATTTG+GGG - chr5_4:64668733-64668752 None:intergenic 30.0%
CTTGGGAATGATACAAATTT+GGG - chr5_4:64668734-64668753 None:intergenic 30.0%
TCTTGGGAATGATACAAATT+TGG - chr5_4:64668735-64668754 None:intergenic 30.0%
!! ATGTGCAATTGTTTCAAGTT+GGG - chr5_4:64668773-64668792 None:intergenic 30.0%
!! AGAAGAGTATTTACATGACA+AGG - chr5_4:64668824-64668843 None:intergenic 30.0%
! TTTGCACATCGTTTAACTTT+GGG - chr5_4:64668847-64668866 None:intergenic 30.0%
! ATTTGCACATCGTTTAACTT+TGG - chr5_4:64668848-64668867 None:intergenic 30.0%
CTGGAAACATCTCAATATTT+GGG - chr5_4:64668880-64668899 None:intergenic 30.0%
TCTGGAAACATCTCAATATT+TGG - chr5_4:64668881-64668900 None:intergenic 30.0%
AATATTGAGATGTTTCCAGA+AGG + chr5_4:64668881-64668900 Msa0864340:CDS 30.0%
ATATTGAGATGTTTCCAGAA+GGG + chr5_4:64668882-64668901 Msa0864340:CDS 30.0%
ATGGTCCATAAATTGTAAGT+CGG - chr5_4:64668997-64669016 None:intergenic 30.0%
CTTCAATTGTTAATTGTTGG+AGG - chr5_4:64669147-64669166 None:intergenic 30.0%
!!! TCAAGTTTTATTAGAGAAGG+AGG - chr5_4:64669208-64669227 None:intergenic 30.0%
AATTGTTGAATGTCCTTTGT+TGG + chr5_4:64669228-64669247 Msa0864340:CDS 30.0%
! AAATTTTGGGCCATATTTGT+GGG - chr5_4:64669276-64669295 None:intergenic 30.0%
TGAAGTGGAATATCCAAATT+AGG - chr5_4:64669512-64669531 None:intergenic 30.0%
TATGTTACCAAAAAGTGAAG+TGG - chr5_4:64669527-64669546 None:intergenic 30.0%
ACATATCATACTAGTTGTTG+TGG + chr5_4:64669542-64669561 Msa0864340:intron 30.0%
CATATCATACTAGTTGTTGT+GGG + chr5_4:64669543-64669562 Msa0864340:intron 30.0%
TAATCCTAGTATTACCACAA+TGG - chr5_4:64669569-64669588 None:intergenic 30.0%
CTCTGTGTATAAAAATGTTG+GGG + chr5_4:64669775-64669794 Msa0864340:intron 30.0%
ATACAAAGATGCCATATTTG+TGG + chr5_4:64669805-64669824 Msa0864340:intron 30.0%
ACGGATAGACAAATTCAAAA+TGG - chr5_4:64669854-64669873 None:intergenic 30.0%
TCCATGGAAGAAAAAAAATC+GGG - chr5_4:64669879-64669898 None:intergenic 30.0%
ACTAATTAGCATAATACCAC+TGG - chr5_4:64669916-64669935 None:intergenic 30.0%
TATGCTAATTAGTAGACAAG+TGG + chr5_4:64669923-64669942 Msa0864340:intron 30.0%
!! TTAGTAGACAAGTGGATTAA+TGG + chr5_4:64669931-64669950 Msa0864340:intron 30.0%
! TTTTCCAATAATTGTTGTGG+GGG - chr5_4:64669992-64670011 None:intergenic 30.0%
TCAAGCTTTCAAGAAAATCA+CGG - chr5_4:64670118-64670137 None:intergenic 30.0%
AGAAAATGCATTAACAAAGG+TGG - chr5_4:64670380-64670399 None:intergenic 30.0%
TTAGTGTCTAACAGCAAAAA+AGG - chr5_4:64670519-64670538 None:intergenic 30.0%
!!! TTTTTTGCTGTTAGACACTA+AGG + chr5_4:64670518-64670537 Msa0864340:intron 30.0%
AATATCAGCTCAAAACAAGT+TGG - chr5_4:64670752-64670771 None:intergenic 30.0%
! GTTTTGCTTATAATAGTGAC+CGG + chr5_4:64671016-64671035 Msa0864340:intron 30.0%
GAAAATAAGCACAGACATTT+AGG - chr5_4:64671078-64671097 None:intergenic 30.0%
CAAGTATACATCTTATGTGA+AGG + chr5_4:64671360-64671379 Msa0864340:intron 30.0%
GGTATTTGATCATTGCTTTA+AGG + chr5_4:64671381-64671400 Msa0864340:intron 30.0%
CAAATTGCGGAAAAATAATG+AGG + chr5_4:64671559-64671578 Msa0864340:intron 30.0%
!! GAAAAATAATGAGGTTGATG+TGG + chr5_4:64671568-64671587 Msa0864340:intron 30.0%
! GAAATTTGGATTGAGTTGTT+GGG - chr5_4:64671755-64671774 None:intergenic 30.0%
! AGAAATTTGGATTGAGTTGT+TGG - chr5_4:64671756-64671775 None:intergenic 30.0%
! ATAGTGATTGTTTTCTTGAG+AGG + chr5_4:64672118-64672137 Msa0864340:intron 30.0%
!!! TTTTTTTTTTTGGTAGTGGC+CGG + chr5_4:64672203-64672222 Msa0864340:intron 30.0%
ATATAATATATGCAAGGTCG+GGG - chr5_4:64672237-64672256 None:intergenic 30.0%
TGAGCTTAACTCAGTTAATA+TGG - chr5_4:64672265-64672284 None:intergenic 30.0%
!! GATAGTGGAAAACATACAAA+TGG - chr5_4:64672461-64672480 None:intergenic 30.0%
! TTTGGAATATTGATAACTGG+GGG + chr5_4:64672588-64672607 Msa0864340:intron 30.0%
GAATGAGTAAATATCGAAGT+TGG - chr5_4:64672644-64672663 None:intergenic 30.0%
! TTTGTTTCTTGAATGGACAA+TGG - chr5_4:64672692-64672711 None:intergenic 30.0%
TTGTTCAAAGACGAATATCA+TGG + chr5_4:64672737-64672756 Msa0864340:intron 30.0%
CAATTCATACACACATAATG+GGG - chr5_4:64672943-64672962 None:intergenic 30.0%
ATGAAATTTGAAGAGGGTAA+GGG - chr5_4:64673103-64673122 None:intergenic 30.0%
AATGAAATTTGAAGAGGGTA+AGG - chr5_4:64673104-64673123 None:intergenic 30.0%
ATCACAAAGTAAATCTAGTC+AGG + chr5_4:64673128-64673147 Msa0864340:intron 30.0%
AGTCAGGATATAAAAGTCAT+TGG + chr5_4:64673144-64673163 Msa0864340:intron 30.0%
TAGGAACAATAGTCATTGTT+GGG + chr5_4:64673309-64673328 Msa0864340:intron 30.0%
ATCCCCCAAATATGTATATA+TGG + chr5_4:64673390-64673409 Msa0864340:intron 30.0%
TGTTGTAAAAGATAGAGATG+TGG + chr5_4:64673455-64673474 Msa0864340:intron 30.0%
AAAATTTCAAGATTCTCTCC+TGG - chr5_4:64673519-64673538 None:intergenic 30.0%
! AGGAGAGAATCTTGAAATTT+TGG + chr5_4:64673518-64673537 Msa0864340:intron 30.0%
! TACTCTTTGTTTGTTTGTCT+CGG + chr5_4:64673570-64673589 Msa0864340:intron 30.0%
GATTGAAATTGAATCGTGAT+CGG - chr5_4:64673878-64673897 None:intergenic 30.0%
!!! AGTTTTAGACTTTGCATAGT+TGG + chr5_4:64674069-64674088 Msa0864340:intron 30.0%
CATAATTTCCTTGCTTTCAT+CGG - chr5_4:64674476-64674495 None:intergenic 30.0%
! ATCTAACTTGCAATAATGGT+TGG - chr5_4:64674542-64674561 None:intergenic 30.0%
GAAGATGCATCTTGTTGATA+TGG + chr5_4:64668105-64668124 Msa0864340:intron 35.0%
GTATTAGACTACATGGTTGA+AGG - chr5_4:64668159-64668178 None:intergenic 35.0%
CATGTAGTCTAATACCTACA+CGG + chr5_4:64668164-64668183 Msa0864340:intron 35.0%
AATAGATATTGATGGGGTGA+CGG - chr5_4:64668413-64668432 None:intergenic 35.0%
! TTTTACCCTTATCCTTAGAG+AGG + chr5_4:64668486-64668505 Msa0864340:CDS 35.0%
!! TATTGATTTCGAGAGACTAG+AGG - chr5_4:64668637-64668656 None:intergenic 35.0%
TTTGTATCATTCCCAAGAGA+AGG + chr5_4:64668737-64668756 Msa0864340:CDS 35.0%
! GATGTGCAATTGTTTCAAGT+TGG - chr5_4:64668774-64668793 None:intergenic 35.0%
TATTGAGATGTTTCCAGAAG+GGG + chr5_4:64668883-64668902 Msa0864340:CDS 35.0%
! AGTTTGAGATCACTTTGTGT+CGG + chr5_4:64668917-64668936 Msa0864340:intron 35.0%
CTTACCCGACTTACAATTTA+TGG + chr5_4:64668989-64669008 Msa0864340:intron 35.0%
TGGTCCATAAATTGTAAGTC+GGG - chr5_4:64668996-64669015 None:intergenic 35.0%
ACAATTTATGGACCATGTGA+TGG + chr5_4:64669001-64669020 Msa0864340:intron 35.0%
AAAATTCCATAGATCTAGGG+AGG - chr5_4:64669077-64669096 None:intergenic 35.0%
AATGTCCTTTGTTGGAAGAA+CGG + chr5_4:64669236-64669255 Msa0864340:CDS 35.0%
ATATTTGTGGGTGTTTCATG+CGG - chr5_4:64669264-64669283 None:intergenic 35.0%
! GAAATTTTGGGCCATATTTG+TGG - chr5_4:64669277-64669296 None:intergenic 35.0%
! CCATTTTCCATCAACCATAA+TGG - chr5_4:64669311-64669330 None:intergenic 35.0%
!! CCATTATGGTTGATGGAAAA+TGG + chr5_4:64669308-64669327 Msa0864340:intron 35.0%
!!! TTAGCTTTTTTGTAGGCTCT+TGG + chr5_4:64669450-64669469 Msa0864340:intron 35.0%
TGCTTCATACAAGCCTAATT+TGG + chr5_4:64669496-64669515 Msa0864340:intron 35.0%
!! GGATATTCCACTTCACTTTT+TGG + chr5_4:64669517-64669536 Msa0864340:intron 35.0%
CCATTATGGACTTTCTTTCA+TGG - chr5_4:64669668-64669687 None:intergenic 35.0%
CCATGAAAGAAAGTCCATAA+TGG + chr5_4:64669665-64669684 Msa0864340:intron 35.0%
! GAAAGAAAGTCCATAATGGA+TGG + chr5_4:64669669-64669688 Msa0864340:intron 35.0%
!! ATGAGAAAGCATCTTTACGA+AGG - chr5_4:64669741-64669760 None:intergenic 35.0%
GAAGAAAAAAAATCGGGCAA+CGG - chr5_4:64669873-64669892 None:intergenic 35.0%
!! ACAAGTGGATTAATGGTGTA+AGG + chr5_4:64669938-64669957 Msa0864340:intron 35.0%
!! CAAGTGGATTAATGGTGTAA+GGG + chr5_4:64669939-64669958 Msa0864340:intron 35.0%
! CACAAACTGTTAACAGCTTT+TGG + chr5_4:64670047-64670066 Msa0864340:intron 35.0%
! AAAGTAATGCATGCTTTTGC+AGG + chr5_4:64670075-64670094 Msa0864340:intron 35.0%
CAAGCTTTCAAGAAAATCAC+GGG - chr5_4:64670117-64670136 None:intergenic 35.0%
AAAGATGTCAAATGTGGAAC+TGG + chr5_4:64670457-64670476 Msa0864340:intron 35.0%
AATATGCATCCTCCAATTGA+GGG - chr5_4:64670491-64670510 None:intergenic 35.0%
!!! GAAAATCCAGCTTTTAGAGT+TGG - chr5_4:64670564-64670583 None:intergenic 35.0%
! TCTTTCTAAAAACCAGTAGC+AGG - chr5_4:64670602-64670621 None:intergenic 35.0%
ATACTCTTATGTATACCCTC+CGG + chr5_4:64670885-64670904 Msa0864340:intron 35.0%
TTTAAATCTACTACACCCTC+CGG - chr5_4:64671038-64671057 None:intergenic 35.0%
TATTGTGGTCTACATGCATA+TGG - chr5_4:64671311-64671330 None:intergenic 35.0%
TAGACCACAATACATTATGC+CGG + chr5_4:64671319-64671338 Msa0864340:intron 35.0%
GAAGCAAATCAACATGAAAC+CGG - chr5_4:64671341-64671360 None:intergenic 35.0%
GGACCCCATTATAAGAAATT+TGG - chr5_4:64671769-64671788 None:intergenic 35.0%
CATACAAGATGTATGATCAG+TGG - chr5_4:64671790-64671809 None:intergenic 35.0%
!!! TTTTTTTTTTGGTAGTGGCC+GGG + chr5_4:64672204-64672223 Msa0864340:intron 35.0%
AGAATTAAGACCATAGTCGT+CGG - chr5_4:64673255-64673274 None:intergenic 35.0%
CTAGGAACAATAGTCATTGT+TGG + chr5_4:64673308-64673327 Msa0864340:intron 35.0%
TAAAAGATAGAGATGTGGAG+AGG + chr5_4:64673460-64673479 Msa0864340:intron 35.0%
AGGCATATCAAGACAAAGTA+AGG + chr5_4:64673480-64673499 Msa0864340:intron 35.0%
! CAAAAGGTACAATTCCATCT+TGG - chr5_4:64673726-64673745 None:intergenic 35.0%
ACGTACAACAATCGCAATTA+TGG - chr5_4:64673965-64673984 None:intergenic 35.0%
TTGGGAAAAGAAAATGTGCA+TGG - chr5_4:64673993-64674012 None:intergenic 35.0%
AAAATGACCTCGCATACATT+GGG - chr5_4:64674011-64674030 None:intergenic 35.0%
AAAAATGACCTCGCATACAT+TGG - chr5_4:64674012-64674031 None:intergenic 35.0%
TTGTGGACAAAAAGAACTTG+AGG - chr5_4:64674038-64674057 None:intergenic 35.0%
AGCTAGCAAGCATTTATGTT+TGG + chr5_4:64674267-64674286 Msa0864340:intron 35.0%
TTTCATCAACCTATGCACAT+TGG - chr5_4:64674425-64674444 None:intergenic 35.0%
! TCGGTTATCTTTGCATGTTT+TGG - chr5_4:64674457-64674476 None:intergenic 35.0%
AAAGATAACCGATGAAAGCA+AGG + chr5_4:64674465-64674484 Msa0864340:CDS 35.0%
CGATGAAAGCAAGGAAATTA+TGG + chr5_4:64674474-64674493 Msa0864340:CDS 35.0%
TTATGAGCTTGAAAATCCTG+TGG - chr5_4:64674730-64674749 None:intergenic 35.0%
AACACGAAATTTGGATCCAA+CGG - chr5_4:64674757-64674776 None:intergenic 35.0%
AAATTGCACCCATTTCTGTT+GGG - chr5_4:64674786-64674805 None:intergenic 35.0%
AAAATTGCACCCATTTCTGT+TGG - chr5_4:64674787-64674806 None:intergenic 35.0%
! ACAGAAATGGGTGCAATTTT+AGG + chr5_4:64674787-64674806 Msa0864340:CDS 35.0%
! GATGATGATGATAGAGAACT+TGG + chr5_4:64674820-64674839 Msa0864340:CDS 35.0%
! TGATGGAAGCTTTGATGTTA+TGG + chr5_4:64674873-64674892 Msa0864340:CDS 35.0%
TCGTGATTGTCCAAGATTAC+AGG + chr5_4:64667767-64667786 Msa0864340:CDS 40.0%
CGTGATTGTCCAAGATTACA+GGG + chr5_4:64667768-64667787 Msa0864340:CDS 40.0%
GGAAAATCTCCCTGTAATCT+TGG - chr5_4:64667780-64667799 None:intergenic 40.0%
! TCCATCTCATCTTTCCGTTT+TGG + chr5_4:64667797-64667816 Msa0864340:CDS 40.0%
TCCAAAACGGAAAGATGAGA+TGG - chr5_4:64667801-64667820 None:intergenic 40.0%
! ATTGATCGATGCAACTTGCT+TGG + chr5_4:64667831-64667850 Msa0864340:CDS 40.0%
!! TAACATCCCAGACTGCTTTT+AGG + chr5_4:64667923-64667942 Msa0864340:intron 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG - chr5_4:64667962-64667981 None:intergenic 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG - chr5_4:64667963-64667982 None:intergenic 40.0%
! TTTTCGGTAGCTCAATCCAT+AGG - chr5_4:64668085-64668104 None:intergenic 40.0%
TAGACTACATGGTTGAAGGA+AGG - chr5_4:64668155-64668174 None:intergenic 40.0%
CGTGTAGGTATTAGACTACA+TGG - chr5_4:64668166-64668185 None:intergenic 40.0%
! GACAACCTCTCTAAGGATAA+GGG - chr5_4:64668494-64668513 None:intergenic 40.0%
!! TATGATGGACAACCTCTCTA+AGG - chr5_4:64668501-64668520 None:intergenic 40.0%
CATGCAGATGACTTTGCTTT+GGG - chr5_4:64668544-64668563 None:intergenic 40.0%
TCATGCAGATGACTTTGCTT+TGG - chr5_4:64668545-64668564 None:intergenic 40.0%
ATTTCGAGAGACTAGAGGTT+TGG - chr5_4:64668632-64668651 None:intergenic 40.0%
ATTGAGATGTTTCCAGAAGG+GGG + chr5_4:64668884-64668903 Msa0864340:CDS 40.0%
CAAAGTGATCTCAAACTACG+CGG - chr5_4:64668914-64668933 None:intergenic 40.0%
GAATCCATCTCTAACTTCGA+TGG + chr5_4:64668961-64668980 Msa0864340:intron 40.0%
ATGTCCATCGAAGTTAGAGA+TGG - chr5_4:64668968-64668987 None:intergenic 40.0%
!!! ATGGAATTTTTCAAGCCTGC+AGG + chr5_4:64669087-64669106 Msa0864340:intron 40.0%
TTAATTGTTGGAGGGACTTG+AGG - chr5_4:64669138-64669157 None:intergenic 40.0%
GCATGAAACACCCACAAATA+TGG + chr5_4:64669263-64669282 Msa0864340:CDS 40.0%
! GCTCTGATGTGGGAAATTTT+GGG - chr5_4:64669289-64669308 None:intergenic 40.0%
!! AACCATAATGGCTCTGATGT+GGG - chr5_4:64669299-64669318 None:intergenic 40.0%
ATCAGAGCCATTATGGTTGA+TGG + chr5_4:64669301-64669320 Msa0864340:intron 40.0%
!!! GCCCGATTTTTTTTCTTCCA+TGG + chr5_4:64669875-64669894 Msa0864340:intron 40.0%
TGGATTAATGGTGTAAGGGA+AGG + chr5_4:64669943-64669962 Msa0864340:intron 40.0%
ATGTCTACTACTGTGATGCA+AGG + chr5_4:64670139-64670158 Msa0864340:intron 40.0%
TACTGTGATGCAAGGTTTGT+TGG + chr5_4:64670147-64670166 Msa0864340:intron 40.0%
TTTCAACTCAAGTGTACCAC+TGG + chr5_4:64670294-64670313 Msa0864340:intron 40.0%
! TGTAACGGTTCACAGTTTTC+TGG - chr5_4:64670405-64670424 None:intergenic 40.0%
CAATATGCATCCTCCAATTG+AGG - chr5_4:64670492-64670511 None:intergenic 40.0%
CTCAATTGGAGGATGCATAT+TGG + chr5_4:64670490-64670509 Msa0864340:intron 40.0%
! AGTCTACCAACTCTAAAAGC+TGG + chr5_4:64670555-64670574 Msa0864340:intron 40.0%
ATGAGTATCCTCAGTTCAGT+CGG - chr5_4:64670808-64670827 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr5_4:64671020-64671039 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr5_4:64671019-64671038 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr5_4:64671019-64671038 Msa0864340:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr5_4:64671020-64671039 Msa0864340:intron 40.0%
GAAACCGGCATAATGTATTG+TGG - chr5_4:64671326-64671345 None:intergenic 40.0%
! TTTGGATTGAGTTGTTGGGT+TGG - chr5_4:64671751-64671770 None:intergenic 40.0%
!!! GATTGTTTTGGTAGGGTGAA+TGG + chr5_4:64671894-64671913 Msa0864340:intron 40.0%
!!! TTTTTTTTTGGTAGTGGCCG+GGG + chr5_4:64672205-64672224 Msa0864340:intron 40.0%
TTAACTGAGTTAAGCTCACG+AGG + chr5_4:64672267-64672286 Msa0864340:intron 40.0%
AAGACGAATATCATGGCTTC+TGG + chr5_4:64672744-64672763 Msa0864340:intron 40.0%
TTACTTGAACTTGACTCTCC+AGG - chr5_4:64672783-64672802 None:intergenic 40.0%
! TTCTTTTCCCAATGTATGCG+AGG + chr5_4:64674001-64674020 Msa0864340:intron 40.0%
! AAAACTCACACACTAGCTTG+TGG - chr5_4:64674055-64674074 None:intergenic 40.0%
! GACTATTGTGGTGATGTTAG+AGG + chr5_4:64674339-64674358 Msa0864340:intron 40.0%
! ATTGTGGTGATGTTAGAGGA+TGG + chr5_4:64674343-64674362 Msa0864340:intron 40.0%
AACCTATGCACATTGGCAAT+GGG - chr5_4:64674418-64674437 None:intergenic 40.0%
!! CATTAGCTTTGTTACTGCTG+AGG + chr5_4:64674516-64674535 Msa0864340:CDS 40.0%
! AAAAAGTTGGATGTAGCGGA+AGG - chr5_4:64674641-64674660 None:intergenic 40.0%
CACGAAAAAGTTGGATGTAG+CGG - chr5_4:64674645-64674664 None:intergenic 40.0%
TCAAGCTCATAATTTCCCGT+TGG + chr5_4:64674738-64674757 Msa0864340:CDS 40.0%
ACACGAAATTTGGATCCAAC+GGG - chr5_4:64674756-64674775 None:intergenic 40.0%
GATGATGATAGAGAACTTGG+TGG + chr5_4:64674823-64674842 Msa0864340:CDS 40.0%
GGCAATCCTAAAAGCAGTCT+GGG - chr5_4:64667932-64667951 None:intergenic 45.0%
!! TGTTGGTTTGTGGGGTTAGT+CGG - chr5_4:64667953-64667972 None:intergenic 45.0%
!! AAGACTCGTGTTGGTTTGTG+GGG - chr5_4:64667961-64667980 None:intergenic 45.0%
GCTTGGAGTAGTACTAGGAT+GGG - chr5_4:64668039-64668058 None:intergenic 45.0%
GCTTAACTGTGGAGTTCCTA+TGG + chr5_4:64668066-64668085 Msa0864340:intron 45.0%
ACATCGGAATGAGAGGGATA+CGG - chr5_4:64668193-64668212 None:intergenic 45.0%
CGAATCACATCGGAATGAGA+GGG - chr5_4:64668199-64668218 None:intergenic 45.0%
CCTCTCATTCCGATGTGATT+CGG + chr5_4:64668197-64668216 Msa0864340:intron 45.0%
TAGGAGGAACCGAATCACAT+CGG - chr5_4:64668209-64668228 None:intergenic 45.0%
TTCGGTTCCTCCTATTATCG+TGG + chr5_4:64668215-64668234 Msa0864340:intron 45.0%
TCGGTTCCTCCTATTATCGT+GGG + chr5_4:64668216-64668235 Msa0864340:intron 45.0%
AAGGATGACCCCACGATAAT+AGG - chr5_4:64668228-64668247 None:intergenic 45.0%
TTATCGTGGGGTCATCCTTA+CGG + chr5_4:64668229-64668248 Msa0864340:intron 45.0%
AACCTTTCGTATCCAACTGG+CGG + chr5_4:64668276-64668295 Msa0864340:intron 45.0%
GACGGCAATGACTTCAAAGA+AGG - chr5_4:64668395-64668414 None:intergenic 45.0%
! GGACAACCTCTCTAAGGATA+AGG - chr5_4:64668495-64668514 None:intergenic 45.0%
GAGAGACTAGAGGTTTGGAA+GGG - chr5_4:64668627-64668646 None:intergenic 45.0%
!!! TTTTTCAAGCCTGCAGGCAT+TGG + chr5_4:64669093-64669112 Msa0864340:intron 45.0%
AATTGAAGACTGTCCCAAGC+TGG + chr5_4:64669159-64669178 Msa0864340:CDS 45.0%
TGGAGACTATGGAAGGAGAA+AGG + chr5_4:64669179-64669198 Msa0864340:CDS 45.0%
!! GGCTCTGATGTGGGAAATTT+TGG - chr5_4:64669290-64669309 None:intergenic 45.0%
TTCCCACATCAGAGCCATTA+TGG + chr5_4:64669294-64669313 Msa0864340:CDS 45.0%
!! CAACCATAATGGCTCTGATG+TGG - chr5_4:64669300-64669319 None:intergenic 45.0%
TGGGCCATTGTGGTAATACT+AGG + chr5_4:64669562-64669581 Msa0864340:intron 45.0%
!! TCCATAATGGATGGCTCTAG+AGG + chr5_4:64669678-64669697 Msa0864340:intron 45.0%
!! ACCTCTAGAGCCATCCATTA+TGG - chr5_4:64669682-64669701 None:intergenic 45.0%
GGCACTGTCTATTTGTTCCA+TGG - chr5_4:64669895-64669914 None:intergenic 45.0%
GAACAAATAGACAGTGCCAG+TGG + chr5_4:64669897-64669916 Msa0864340:intron 45.0%
TCCTCCCCCACAACAATTAT+TGG + chr5_4:64669985-64670004 Msa0864340:intron 45.0%
TCCAATAATTGTTGTGGGGG+AGG - chr5_4:64669989-64670008 None:intergenic 45.0%
TTGCAGGTAGACAATATCCC+AGG + chr5_4:64670091-64670110 Msa0864340:intron 45.0%
TTCAAGAAAATCACGGGCCT+GGG - chr5_4:64670111-64670130 None:intergenic 45.0%
TTTCAAGAAAATCACGGGCC+TGG - chr5_4:64670112-64670131 None:intergenic 45.0%
ATAGTTGGATGGATGCTGCA+AGG + chr5_4:64670243-64670262 Msa0864340:intron 45.0%
TAGTTGGATGGATGCTGCAA+GGG + chr5_4:64670244-64670263 Msa0864340:intron 45.0%
CTGGAATCCTATCCCTCAAT+TGG + chr5_4:64670476-64670495 Msa0864340:intron 45.0%
GAATCCTATCCCTCAATTGG+AGG + chr5_4:64670479-64670498 Msa0864340:intron 45.0%
TCTAGATCAACTCCTGCTAC+TGG + chr5_4:64670587-64670606 Msa0864340:intron 45.0%
CTTACTTGTCACAACTGCAG+TGG - chr5_4:64670701-64670720 None:intergenic 45.0%
CACTGCAGTTGTGACAAGTA+AGG + chr5_4:64670699-64670718 Msa0864340:intron 45.0%
GACATAGAAACATGCAACGC+CGG - chr5_4:64671599-64671618 None:intergenic 45.0%
! GGCGTTGCATGTTTCTATGT+CGG + chr5_4:64671598-64671617 Msa0864340:intron 45.0%
ACGAATATCATGGCTTCTGG+TGG + chr5_4:64672747-64672766 Msa0864340:intron 45.0%
!! GGGTAAGGGTGTTAAGAGAA+CGG - chr5_4:64673089-64673108 None:intergenic 45.0%
CTATCTTCATCCGACGACTA+TGG + chr5_4:64673242-64673261 Msa0864340:intron 45.0%
! TAAGGAGCGCATCTAAATCC+AGG + chr5_4:64673498-64673517 Msa0864340:intron 45.0%
ATGCACATTGGCAATGGGAA+AGG - chr5_4:64674413-64674432 None:intergenic 45.0%
TTCCCATTGCCAATGTGCAT+AGG + chr5_4:64674413-64674432 Msa0864340:CDS 45.0%
CAACCTATGCACATTGGCAA+TGG - chr5_4:64674419-64674438 None:intergenic 45.0%
GAGCACGATCACGAAAAAGT+TGG - chr5_4:64674654-64674673 None:intergenic 45.0%
TTTGCCGACCCAACAGAAAT+GGG + chr5_4:64674775-64674794 Msa0864340:CDS 45.0%
! GATGATAGAGAACTTGGTGG+TGG + chr5_4:64674826-64674845 Msa0864340:CDS 45.0%
!!! TACATTTTAAATTTAAAAAT+TGG + chr5_4:64673184-64673203 Msa0864340:intron 5.0%
! TGCTTGGTTCTTCTCTCCCA+AGG + chr5_4:64667847-64667866 Msa0864340:intron 50.0%
! GCTTGGTTCTTCTCTCCCAA+GGG + chr5_4:64667848-64667867 Msa0864340:intron 50.0%
CGGCAATCCTAAAAGCAGTC+TGG - chr5_4:64667933-64667952 None:intergenic 50.0%
CACGCTGAAAAGACTCGTGT+TGG - chr5_4:64667970-64667989 None:intergenic 50.0%
TACTAGGATGGGTGACCTAC+CGG - chr5_4:64668028-64668047 None:intergenic 50.0%
GGCTTGGAGTAGTACTAGGA+TGG - chr5_4:64668040-64668059 None:intergenic 50.0%
!! GCTTGGCTTGGAGTAGTACT+AGG - chr5_4:64668044-64668063 None:intergenic 50.0%
ACAGTTAAGCGTGCTTGGCT+TGG - chr5_4:64668056-64668075 None:intergenic 50.0%
AAGCCAAGCACGCTTAACTG+TGG + chr5_4:64668055-64668074 Msa0864340:intron 50.0%
ACTCCACAGTTAAGCGTGCT+TGG - chr5_4:64668061-64668080 None:intergenic 50.0%
CCGAATCACATCGGAATGAG+AGG - chr5_4:64668200-64668219 None:intergenic 50.0%
CGGTTCCTCCTATTATCGTG+GGG + chr5_4:64668217-64668236 Msa0864340:intron 50.0%
GATGACCCCACGATAATAGG+AGG - chr5_4:64668225-64668244 None:intergenic 50.0%
ATAGTGCCCGTTCCAATTGG+CGG + chr5_4:64668252-64668271 Msa0864340:intron 50.0%
AAGGTTCCCGCCAATTGGAA+CGG - chr5_4:64668262-64668281 None:intergenic 50.0%
TACGAAAGGTTCCCGCCAAT+TGG - chr5_4:64668267-64668286 None:intergenic 50.0%
GGGAACCTTTCGTATCCAAC+TGG + chr5_4:64668273-64668292 Msa0864340:intron 50.0%
ACCTTTCGTATCCAACTGGC+GGG + chr5_4:64668277-64668296 Msa0864340:intron 50.0%
AAGATGTATCACGCACGTCG+TGG - chr5_4:64668313-64668332 None:intergenic 50.0%
TCTGGGAAACGAAACTGCAG+AGG - chr5_4:64668461-64668480 None:intergenic 50.0%
GTCATCTGCATGAGTCCCTT+AGG + chr5_4:64668552-64668571 Msa0864340:CDS 50.0%
CGAGAGACTAGAGGTTTGGA+AGG - chr5_4:64668628-64668647 None:intergenic 50.0%
GCGCAGACAATCCTTCTCTT+GGG - chr5_4:64668751-64668770 None:intergenic 50.0%
AAGGACTCGACACCATCACA+TGG - chr5_4:64669016-64669035 None:intergenic 50.0%
AGCAACGCAAAACCCTTGCT+CGG - chr5_4:64669040-64669059 None:intergenic 50.0%
CCATAGATCTAGGGAGGCAA+GGG - chr5_4:64669071-64669090 None:intergenic 50.0%
TCCATAGATCTAGGGAGGCA+AGG - chr5_4:64669072-64669091 None:intergenic 50.0%
!! TGCAGGCATTGGAGTGCATT+GGG + chr5_4:64669104-64669123 Msa0864340:intron 50.0%
ATTGTTGGAGGGACTTGAGG+TGG - chr5_4:64669135-64669154 None:intergenic 50.0%
CCTTCCATAGTCTCCAGCTT+GGG - chr5_4:64669175-64669194 None:intergenic 50.0%
TCCTTCCATAGTCTCCAGCT+TGG - chr5_4:64669176-64669195 None:intergenic 50.0%
CTAGTTGTTGTGGGCCATTG+TGG + chr5_4:64669552-64669571 Msa0864340:intron 50.0%
AGTTGGATGGATGCTGCAAG+GGG + chr5_4:64670245-64670264 Msa0864340:intron 50.0%
ATGGATGCTGCAAGGGGAAT+TGG + chr5_4:64670251-64670270 Msa0864340:intron 50.0%
TGAGCACAGCTCAAATCCAG+TGG - chr5_4:64670313-64670332 None:intergenic 50.0%
GCATCCTCCAATTGAGGGAT+AGG - chr5_4:64670486-64670505 None:intergenic 50.0%
!! TGAGGTTGATGTGGTCGAAC+CGG + chr5_4:64671577-64671596 Msa0864340:intron 50.0%
CTTGACTCTCCAGGATGATC+TGG - chr5_4:64672774-64672793 None:intergenic 50.0%
AGTGCAAGCAGCTAGTTCGA+GGG + chr5_4:64674366-64674385 Msa0864340:CDS 50.0%
TTTCGTGATCGTGCTCGTGT+AGG + chr5_4:64674658-64674677 Msa0864340:CDS 50.0%
GCTTGAAAATCCTGTGGCAG+CGG - chr5_4:64674724-64674743 None:intergenic 50.0%
GGGTCGGCAAACACGAAATT+TGG - chr5_4:64674766-64674785 None:intergenic 50.0%
GTTTGCCGACCCAACAGAAA+TGG + chr5_4:64674774-64674793 Msa0864340:CDS 50.0%
TGCACCCATTTCTGTTGGGT+CGG - chr5_4:64674782-64674801 None:intergenic 50.0%
!! GATAGAGAACTTGGTGGTGG+TGG + chr5_4:64674829-64674848 Msa0864340:CDS 50.0%
! GGTGATGGCAACTCAAGTGA+TGG + chr5_4:64674856-64674875 Msa0864340:CDS 50.0%
ACGCTTACCGGGAAACTTCC+CGG + chr5_4:64668006-64668025 Msa0864340:intron 55.0%
TTACCGGGAAACTTCCCGGT+AGG + chr5_4:64668010-64668029 Msa0864340:intron 55.0%
TGACCTACCGGGAAGTTTCC+CGG - chr5_4:64668016-64668035 None:intergenic 55.0%
ACTAGGATGGGTGACCTACC+GGG - chr5_4:64668027-64668046 None:intergenic 55.0%
TCGGAATGAGAGGGATACGG+AGG - chr5_4:64668190-64668209 None:intergenic 55.0%
TGGAACGGGCACTATCCGTA+AGG - chr5_4:64668247-64668266 None:intergenic 55.0%
CGGATAGTGCCCGTTCCAAT+TGG + chr5_4:64668249-64668268 Msa0864340:intron 55.0%
TAGTGCCCGTTCCAATTGGC+GGG + chr5_4:64668253-64668272 Msa0864340:intron 55.0%
AGGTTCCCGCCAATTGGAAC+GGG - chr5_4:64668261-64668280 None:intergenic 55.0%
TCCCGCCAGTTGGATACGAA+AGG - chr5_4:64668281-64668300 None:intergenic 55.0%
GCTTTCGATATCCCGCCAGT+TGG - chr5_4:64668291-64668310 None:intergenic 55.0%
GGTTTGGAAGGGTCTCCAGT+GGG - chr5_4:64668616-64668635 None:intergenic 55.0%
AGGTTTGGAAGGGTCTCCAG+TGG - chr5_4:64668617-64668636 None:intergenic 55.0%
GGCGCAGACAATCCTTCTCT+TGG - chr5_4:64668752-64668771 None:intergenic 55.0%
GCAACGCAAAACCCTTGCTC+GGG - chr5_4:64669039-64669058 None:intergenic 55.0%
AGATCTAGGGAGGCAAGGGA+AGG - chr5_4:64669067-64669086 None:intergenic 55.0%
CCCTTGCCTCCCTAGATCTA+TGG + chr5_4:64669068-64669087 Msa0864340:intron 55.0%
CAATGCACTCCAATGCCTGC+AGG - chr5_4:64669105-64669124 None:intergenic 55.0%
!! CTGCAGGCATTGGAGTGCAT+TGG + chr5_4:64669103-64669122 Msa0864340:intron 55.0%
CTGTCCCAAGCTGGAGACTA+TGG + chr5_4:64669168-64669187 Msa0864340:CDS 55.0%
CCCAAGCTGGAGACTATGGA+AGG + chr5_4:64669172-64669191 Msa0864340:CDS 55.0%
CGGCACCGTTCTTCCAACAA+AGG - chr5_4:64669244-64669263 None:intergenic 55.0%
AGTTCAGTCGGCGTCACAAG+AGG - chr5_4:64670796-64670815 None:intergenic 55.0%
! TTGTGACGCCGACTGAACTG+AGG + chr5_4:64670797-64670816 Msa0864340:intron 55.0%
TCTGGTGGTCCAGATCATCC+TGG + chr5_4:64672762-64672781 Msa0864340:intron 55.0%
GAGTGCAAGCAGCTAGTTCG+AGG + chr5_4:64674365-64674384 Msa0864340:CDS 55.0%
TGAAAATCCTGTGGCAGCGG+CGG - chr5_4:64674721-64674740 None:intergenic 55.0%
!! AGAGAACTTGGTGGTGGTGG+TGG + chr5_4:64674832-64674851 Msa0864340:CDS 55.0%
CACGGATGGCATGAGCCCTT+GGG - chr5_4:64667866-64667885 None:intergenic 60.0%
TCACGGATGGCATGAGCCCT+TGG - chr5_4:64667867-64667886 None:intergenic 60.0%
GACCTCACTCGCACGCTTAC+CGG + chr5_4:64667994-64668013 Msa0864340:intron 60.0%
ACCTCACTCGCACGCTTACC+GGG + chr5_4:64667995-64668014 Msa0864340:intron 60.0%
TTCTCTCGCAACCCTCCCAC+TGG + chr5_4:64668598-64668617 Msa0864340:intron 60.0%
TGGAAGGGTCTCCAGTGGGA+GGG - chr5_4:64668612-64668631 None:intergenic 60.0%
TTGGAAGGGTCTCCAGTGGG+AGG - chr5_4:64668613-64668632 None:intergenic 60.0%
TGTCGAGTCCTTCCCGAGCA+AGG + chr5_4:64669024-64669043 Msa0864340:intron 60.0%
GTCGAGTCCTTCCCGAGCAA+GGG + chr5_4:64669025-64669044 Msa0864340:intron 60.0%
CGCAAAACCCTTGCTCGGGA+AGG - chr5_4:64669035-64669054 None:intergenic 60.0%
TCTAGGGAGGCAAGGGAAGG+AGG - chr5_4:64669064-64669083 None:intergenic 60.0%
CAAGGTCGGGGTTCAAACCC+CGG - chr5_4:64672225-64672244 None:intergenic 60.0%
!! GAACTTGGTGGTGGTGGTGG+TGG + chr5_4:64674835-64674854 Msa0864340:CDS 60.0%
TCCCGGTAAGCGTGCGAGTG+AGG - chr5_4:64667999-64668018 None:intergenic 65.0%
GAGGGATACGGAGGCCGTGT+AGG - chr5_4:64668181-64668200 None:intergenic 65.0%
CTACGCGGCATACCCCCTTC+TGG - chr5_4:64668899-64668918 None:intergenic 65.0%
TGGAGGTGGAGGTGGAGGTG+GGG - chr5_4:64674695-64674714 None:intergenic 65.0%
GTGGAGGTGGAGGTGGAGGT+GGG - chr5_4:64674696-64674715 None:intergenic 65.0%
AAATCCTGTGGCAGCGGCGG+TGG - chr5_4:64674718-64674737 None:intergenic 65.0%
!! GGTGGTGGTGGTGGTGGTGA+TGG + chr5_4:64674841-64674860 Msa0864340:CDS 65.0%
GGAGGTGGAGGTGGAGGTGG+GGG - chr5_4:64674694-64674713 None:intergenic 70.0%
GGTGGAGGTGGAGGTGGAGG+TGG - chr5_4:64674697-64674716 None:intergenic 70.0%
!! GGTGGTGGAGGTGGAGGTGG+AGG - chr5_4:64674700-64674719 None:intergenic 70.0%
!! GGCGGTGGTGGAGGTGGAGG+TGG - chr5_4:64674703-64674722 None:intergenic 75.0%
!! AGCGGCGGTGGTGGAGGTGG+AGG - chr5_4:64674706-64674725 None:intergenic 75.0%
! TGTGGCAGCGGCGGTGGTGG+AGG - chr5_4:64674712-64674731 None:intergenic 75.0%
TCCACCACCGCCGCTGCCAC+AGG + chr5_4:64674711-64674730 Msa0864340:CDS 75.0%
TCCTGTGGCAGCGGCGGTGG+TGG - chr5_4:64674715-64674734 None:intergenic 75.0%
!!! GGCAGCGGCGGTGGTGGAGG+TGG - chr5_4:64674709-64674728 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 64667733 64674918 64667733 ID=Msa0864340;Name=Msa0864340
chr5_4 mRNA 64667733 64674918 64667733 ID=Msa0864340-mRNA-1;Parent=Msa0864340;Name=Msa0864340-mRNA-1;_AED=0.33;_eAED=0.34;_QI=0|0|0|1|0|0|5|0|411
chr5_4 exon 64667733 64667852 64667733 ID=Msa0864340-mRNA-1:exon:20355;Parent=Msa0864340-mRNA-1
chr5_4 exon 64668452 64668591 64668452 ID=Msa0864340-mRNA-1:exon:20356;Parent=Msa0864340-mRNA-1
chr5_4 exon 64668724 64668934 64668724 ID=Msa0864340-mRNA-1:exon:20357;Parent=Msa0864340-mRNA-1
chr5_4 exon 64669109 64669315 64669109 ID=Msa0864340-mRNA-1:exon:20358;Parent=Msa0864340-mRNA-1
chr5_4 exon 64674361 64674918 64674361 ID=Msa0864340-mRNA-1:exon:20359;Parent=Msa0864340-mRNA-1
chr5_4 CDS 64667733 64667852 64667733 ID=Msa0864340-mRNA-1:cds;Parent=Msa0864340-mRNA-1
chr5_4 CDS 64668452 64668591 64668452 ID=Msa0864340-mRNA-1:cds;Parent=Msa0864340-mRNA-1
chr5_4 CDS 64668724 64668934 64668724 ID=Msa0864340-mRNA-1:cds;Parent=Msa0864340-mRNA-1
chr5_4 CDS 64669109 64669315 64669109 ID=Msa0864340-mRNA-1:cds;Parent=Msa0864340-mRNA-1
chr5_4 CDS 64674361 64674918 64674361 ID=Msa0864340-mRNA-1:cds;Parent=Msa0864340-mRNA-1
Gene Sequence

>Msa0864340

ATGATTCTTTTCCTGTACTTAAATATCTTGAGATTCGTGATTGTCCAAGATTACAGGGAGATTTTCCATCTCATCTTTCCGTTTTGGAAAAAATTAGGATTGATCGATGCAACTTGCTTGATTCTTCCTCTGCAGTTTCGTTTCCCAGAGATTTTTTTACCCTTATCCTTAGAGAGGTTGTCCATCATAAATTTTAGGAATCTAGATTTCCCAAAGCAAAGTCATCTGCATGAGTCCCTTAGGTATCTTCGTATAGATAGAGACTGCCCCAAATTTGTATCATTCCCAAGAGAAGGATTGTCTGCGCCCAACTTGAAACAATTGCACATCTTCAACTGCGTTAACTTCAAGTCATTACCTTGTCATGTAAATACTCTTCTCCCAAAGTTAAACGATGTGCAAATGTATGATTGCCCAAATATTGAGATGTTTCCAGAAGGGGGTATGCCGCGTAGTTTGAGATCACTTTGTGCATTGGAGTGCATTGGGCTTCACCACCTCAAGTCCCTCCAACAATTAACAATTGAAGACTGTCCCAAGCTGGAGACTATGGAAGGAGAAAGGCTGCCTCCTTCTCTAATAAAACTTGAAATTGTTGAATGTCCTTTGTTGGAAGAACGGTGCCGCATGAAACACCCACAAATATGGCCCAAAATTTCCCACATCAGAGCCATTATGGATGGAGTGCAAGCAGCTAGTTCGAGGGTGCAAGAAGAATTTTCAAGAGCCTTTCCCATTGCCAATGTGCATAGGTTGATGAAAAAAGCACTTCCAAAACATGCAAAGATAACCGATGAAAGCAAGGAAATTATGGTGAAATATGCAGCTGAATTCATTAGCTTTGTTACTGCTGAGGCCAACCATTATTGCAAGTTAGATTATAGGACAACAGTTACTGCTGAAGATTTGTTAATTACTATGCACAAATTGGGTTTTGATGTCTATGCTAAGTATTCCTTCCGCTACATCCAACTTTTTCGTGATCGTGCTCGTGTAGGTCAATATGCTCCCCCACCTCCACCTCCACCTCCACCACCGCCGCTGCCACAGGATTTTCAAGCTCATAATTTCCCGTTGGATCCAAATTTCGTGTTTGCCGACCCAACAGAAATGGGTGCAATTTTAGGAGATGATGATGATGATGATGATAGAGAACTTGGTGGTGGTGGTGGTGGTGATGGCAACTCAAGTGATGGAAGCTTTGATGTTATGGCTTTTCTTAATAGTGATGACTAA
Protein sequence

>Msa0864340

MILFLYLNILRFVIVQDYREIFHLIFPFWKKLGLIDATCLILPLQFRFPEIFLPLSLERLSIINFRNLDFPKQSHLHESLRYLRIDRDCPKFVSFPREGLSAPNLKQLHIFNCVNFKSLPCHVNTLLPKLNDVQMYDCPNIEMFPEGGMPRSLRSLCALECIGLHHLKSLQQLTIEDCPKLETMEGERLPPSLIKLEIVECPLLEERCRMKHPQIWPKISHIRAIMDGVQAASSRVQEEFSRAFPIANVHRLMKKALPKHAKITDESKEIMVKYAAEFISFVTAEANHYCKLDYRTTVTAEDLLITMHKLGFDVYAKYSFRYIQLFRDRARVGQYAPPPPPPPPPPPLPQDFQAHNFPLDPNFVFADPTEMGAILGDDDDDDDRELGGGGGGDGNSSDGSFDVMAFLNSDD*