Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77828.t1 | XP_013454459.1 | 82.5 | 274 | 2 | 1 | 1 | 228 | 1 | 274 | 6.80E-118 | 433.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77828.t1 | Q32904 | 76.1 | 272 | 21 | 1 | 1 | 228 | 1 | 272 | 9.0e-111 | 401.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77828.t1 | I3SZG9 | 82.5 | 274 | 2 | 1 | 1 | 228 | 1 | 274 | 4.9e-118 | 433.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene77828 | 0.803117 | 4.06E-49 | -1.69E-46 |
| MS.gene049171 | MS.gene77828 | 0.898922 | 3.30E-77 | -1.69E-46 |
| MS.gene049173 | MS.gene77828 | 0.851344 | 9.44E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene77828 | 0.880702 | 4.41E-70 | -1.69E-46 |
| MS.gene049222 | MS.gene77828 | 0.894929 | 1.55E-75 | -1.69E-46 |
| MS.gene049232 | MS.gene77828 | 0.877903 | 4.32E-69 | -1.69E-46 |
| MS.gene049285 | MS.gene77828 | 0.928052 | 4.98E-92 | -1.69E-46 |
| MS.gene049320 | MS.gene77828 | 0.937107 | 5.93E-98 | -1.69E-46 |
| MS.gene049369 | MS.gene77828 | 0.819063 | 1.41E-52 | -1.69E-46 |
| MS.gene049396 | MS.gene77828 | 0.829514 | 4.93E-55 | -1.69E-46 |
| MS.gene04939 | MS.gene77828 | 0.850675 | 1.46E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene77828 | 0.800542 | 1.37E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene77828 | 0.921791 | 2.27E-88 | -1.69E-46 |
| MS.gene049611 | MS.gene77828 | -0.815038 | 1.13E-51 | -1.69E-46 |
| MS.gene049627 | MS.gene77828 | 0.824359 | 8.43E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene77828 | 0.881627 | 2.05E-70 | -1.69E-46 |
| MS.gene049634 | MS.gene77828 | -0.802162 | 6.39E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene77828 | 0.872958 | 2.13E-67 | -1.69E-46 |
| MS.gene049865 | MS.gene77828 | 0.817818 | 2.71E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene77828 | 0.909428 | 5.76E-82 | -1.69E-46 |
| MS.gene050163 | MS.gene77828 | 0.897068 | 2.01E-76 | -1.69E-46 |
| MS.gene050165 | MS.gene77828 | 0.888038 | 8.41E-73 | -1.69E-46 |
| MS.gene050170 | MS.gene77828 | 0.841317 | 5.11E-58 | -1.69E-46 |
| MS.gene050216 | MS.gene77828 | 0.838596 | 2.62E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene77828 | 0.863175 | 3.00E-64 | -1.69E-46 |
| MS.gene050333 | MS.gene77828 | 0.901643 | 2.18E-78 | -1.69E-46 |
| MS.gene050381 | MS.gene77828 | -0.820089 | 8.24E-53 | -1.69E-46 |
| MS.gene050444 | MS.gene77828 | 0.825782 | 3.89E-54 | -1.69E-46 |
| MS.gene050496 | MS.gene77828 | 0.870507 | 1.39E-66 | -1.69E-46 |
| MS.gene050502 | MS.gene77828 | 0.808993 | 2.36E-50 | -1.69E-46 |
| MS.gene050504 | MS.gene77828 | 0.905763 | 3.04E-80 | -1.69E-46 |
| MS.gene050518 | MS.gene77828 | 0.904709 | 9.24E-80 | -1.69E-46 |
| MS.gene050520 | MS.gene77828 | 0.846802 | 1.73E-59 | -1.69E-46 |
| MS.gene050538 | MS.gene77828 | 0.826322 | 2.89E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene77828 | 0.852751 | 3.76E-61 | -1.69E-46 |
| MS.gene050593 | MS.gene77828 | 0.890993 | 5.96E-74 | -1.69E-46 |
| MS.gene050612 | MS.gene77828 | 0.928819 | 1.68E-92 | -1.69E-46 |
| MS.gene050647 | MS.gene77828 | -0.808976 | 2.38E-50 | -1.69E-46 |
| MS.gene050662 | MS.gene77828 | 0.867402 | 1.41E-65 | -1.69E-46 |
| MS.gene050675 | MS.gene77828 | 0.931867 | 2.00E-94 | -1.69E-46 |
| MS.gene050686 | MS.gene77828 | 0.850134 | 2.07E-60 | -1.69E-46 |
| MS.gene050690 | MS.gene77828 | 0.806291 | 8.83E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene77828 | 0.928186 | 4.12E-92 | -1.69E-46 |
| MS.gene050747 | MS.gene77828 | 0.871442 | 6.81E-67 | -1.69E-46 |
| MS.gene050767 | MS.gene77828 | 0.83571 | 1.43E-56 | -1.69E-46 |
| MS.gene050770 | MS.gene77828 | 0.836379 | 9.69E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene77828 | 0.95131 | 2.68E-109 | -1.69E-46 |
| MS.gene05079 | MS.gene77828 | -0.804618 | 1.98E-49 | -1.69E-46 |
| MS.gene05080 | MS.gene77828 | 0.882908 | 7.02E-71 | -1.69E-46 |
| MS.gene05081 | MS.gene77828 | 0.819961 | 8.82E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene77828 | 0.860707 | 1.71E-63 | -1.69E-46 |
| MS.gene050871 | MS.gene77828 | 0.858844 | 6.23E-63 | -1.69E-46 |
| MS.gene050876 | MS.gene77828 | 0.83282 | 7.60E-56 | -1.69E-46 |
| MS.gene050904 | MS.gene77828 | 0.810579 | 1.07E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene77828 | 0.872282 | 3.58E-67 | -1.69E-46 |
| MS.gene050986 | MS.gene77828 | 0.938866 | 3.31E-99 | -1.69E-46 |
| MS.gene05100 | MS.gene77828 | 0.849268 | 3.61E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene77828 | 0.850873 | 1.28E-60 | -1.69E-46 |
| MS.gene051127 | MS.gene77828 | -0.838198 | 3.32E-57 | -1.69E-46 |
| MS.gene051167 | MS.gene77828 | -0.800987 | 1.11E-48 | -1.69E-46 |
| MS.gene051228 | MS.gene77828 | 0.86678 | 2.22E-65 | -1.69E-46 |
| MS.gene051268 | MS.gene77828 | 0.823371 | 1.44E-53 | -1.69E-46 |
| MS.gene051317 | MS.gene77828 | 0.849814 | 2.54E-60 | -1.69E-46 |
| MS.gene051364 | MS.gene77828 | -0.802565 | 5.28E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene77828 | -0.806203 | 9.22E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene77828 | 0.843666 | 1.22E-58 | -1.69E-46 |
| MS.gene051434 | MS.gene77828 | 0.833004 | 6.84E-56 | -1.69E-46 |
| MS.gene051509 | MS.gene77828 | 0.840831 | 6.86E-58 | -1.69E-46 |
| MS.gene051551 | MS.gene77828 | 0.88657 | 3.05E-72 | -1.69E-46 |
| MS.gene051617 | MS.gene77828 | 0.802503 | 5.44E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene77828 | 0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene77828 | 0.831996 | 1.22E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene77828 | 0.917247 | 6.69E-86 | -1.69E-46 |
| MS.gene051838 | MS.gene77828 | 0.823774 | 1.16E-53 | -1.69E-46 |
| MS.gene051858 | MS.gene77828 | 0.873111 | 1.89E-67 | -1.69E-46 |
| MS.gene051874 | MS.gene77828 | 0.834642 | 2.66E-56 | -1.69E-46 |
| MS.gene051941 | MS.gene77828 | 0.802194 | 6.30E-49 | -1.69E-46 |
| MS.gene051949 | MS.gene77828 | 0.839284 | 1.74E-57 | -1.69E-46 |
| MS.gene052164 | MS.gene77828 | 0.843975 | 1.01E-58 | -1.69E-46 |
| MS.gene052271 | MS.gene77828 | 0.901239 | 3.28E-78 | -1.69E-46 |
| MS.gene052379 | MS.gene77828 | 0.852446 | 4.59E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene77828 | 0.835601 | 1.53E-56 | -1.69E-46 |
| MS.gene052482 | MS.gene77828 | 0.84346 | 1.38E-58 | -1.69E-46 |
| MS.gene052484 | MS.gene77828 | 0.828347 | 9.45E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene77828 | 0.853759 | 1.93E-61 | -1.69E-46 |
| MS.gene052501 | MS.gene77828 | 0.801694 | 7.98E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene77828 | 0.847939 | 8.42E-60 | -1.69E-46 |
| MS.gene052504 | MS.gene77828 | 0.830684 | 2.56E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene77828 | 0.851471 | 8.68E-61 | -1.69E-46 |
| MS.gene052510 | MS.gene77828 | 0.80039 | 1.47E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene77828 | 0.901065 | 3.91E-78 | -1.69E-46 |
| MS.gene052670 | MS.gene77828 | 0.824242 | 8.97E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene77828 | 0.867546 | 1.26E-65 | -1.69E-46 |
| MS.gene052823 | MS.gene77828 | 0.837624 | 4.66E-57 | -1.69E-46 |
| MS.gene052825 | MS.gene77828 | 0.828281 | 9.81E-55 | -1.69E-46 |
| MS.gene052870 | MS.gene77828 | 0.83801 | 3.71E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene77828 | 0.848447 | 6.09E-60 | -1.69E-46 |
| MS.gene052916 | MS.gene77828 | 0.887694 | 1.14E-72 | -1.69E-46 |
| MS.gene052966 | MS.gene77828 | 0.889028 | 3.49E-73 | -1.69E-46 |
| MS.gene053009 | MS.gene77828 | 0.834766 | 2.48E-56 | -1.69E-46 |
| MS.gene053018 | MS.gene77828 | 0.837405 | 5.30E-57 | -1.69E-46 |
| MS.gene053103 | MS.gene77828 | 0.805342 | 1.40E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene77828 | 0.851337 | 9.48E-61 | -1.69E-46 |
| MS.gene053117 | MS.gene77828 | 0.808409 | 3.14E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene77828 | 0.880236 | 6.48E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene77828 | 0.902679 | 7.57E-79 | -1.69E-46 |
| MS.gene053213 | MS.gene77828 | 0.931432 | 3.81E-94 | -1.69E-46 |
| MS.gene053286 | MS.gene77828 | 0.927149 | 1.76E-91 | -1.69E-46 |
| MS.gene053322 | MS.gene77828 | 0.847643 | 1.02E-59 | -1.69E-46 |
| MS.gene053420 | MS.gene77828 | -0.829733 | 4.36E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene77828 | 0.861258 | 1.16E-63 | -1.69E-46 |
| MS.gene053449 | MS.gene77828 | 0.835533 | 1.59E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene77828 | 0.855475 | 6.15E-62 | -1.69E-46 |
| MS.gene053480 | MS.gene77828 | 0.843562 | 1.30E-58 | -1.69E-46 |
| MS.gene053561 | MS.gene77828 | -0.842804 | 2.07E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene77828 | 0.912901 | 1.14E-83 | -1.69E-46 |
| MS.gene053626 | MS.gene77828 | 0.849422 | 3.27E-60 | -1.69E-46 |
| MS.gene053632 | MS.gene77828 | 0.875402 | 3.17E-68 | -1.69E-46 |
| MS.gene053813 | MS.gene77828 | 0.816614 | 5.05E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene77828 | 0.871447 | 6.79E-67 | -1.69E-46 |
| MS.gene053912 | MS.gene77828 | 0.802142 | 6.45E-49 | -1.69E-46 |
| MS.gene053915 | MS.gene77828 | 0.802311 | 5.96E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene77828 | 0.875471 | 3.00E-68 | -1.69E-46 |
| MS.gene054003 | MS.gene77828 | 0.818173 | 2.25E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene77828 | 0.818063 | 2.38E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene77828 | 0.84015 | 1.03E-57 | -1.69E-46 |
| MS.gene054595 | MS.gene77828 | 0.88317 | 5.63E-71 | -1.69E-46 |
| MS.gene054600 | MS.gene77828 | 0.910024 | 2.97E-82 | -1.69E-46 |
| MS.gene054616 | MS.gene77828 | -0.823379 | 1.43E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene77828 | 0.921189 | 4.92E-88 | -1.69E-46 |
| MS.gene05470 | MS.gene77828 | 0.830686 | 2.55E-55 | -1.69E-46 |
| MS.gene054927 | MS.gene77828 | 0.85046 | 1.67E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene77828 | 0.822284 | 2.57E-53 | -1.69E-46 |
| MS.gene054954 | MS.gene77828 | 0.915012 | 9.75E-85 | -1.69E-46 |
| MS.gene05505 | MS.gene77828 | 0.868053 | 8.69E-66 | -1.69E-46 |
| MS.gene055154 | MS.gene77828 | -0.86237 | 5.32E-64 | -1.69E-46 |
| MS.gene055206 | MS.gene77828 | 0.880124 | 7.10E-70 | -1.69E-46 |
| MS.gene055212 | MS.gene77828 | 0.837918 | 3.91E-57 | -1.69E-46 |
| MS.gene055224 | MS.gene77828 | 0.856919 | 2.32E-62 | -1.69E-46 |
| MS.gene055289 | MS.gene77828 | 0.846638 | 1.92E-59 | -1.69E-46 |
| MS.gene055362 | MS.gene77828 | 0.937316 | 4.23E-98 | -1.69E-46 |
| MS.gene055397 | MS.gene77828 | 0.820797 | 5.67E-53 | -1.69E-46 |
| MS.gene055499 | MS.gene77828 | 0.841281 | 5.23E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene77828 | 0.910549 | 1.65E-82 | -1.69E-46 |
| MS.gene055577 | MS.gene77828 | 0.887472 | 1.38E-72 | -1.69E-46 |
| MS.gene055634 | MS.gene77828 | 0.824443 | 8.05E-54 | -1.69E-46 |
| MS.gene055636 | MS.gene77828 | 0.873969 | 9.74E-68 | -1.69E-46 |
| MS.gene055638 | MS.gene77828 | 0.871193 | 8.24E-67 | -1.69E-46 |
| MS.gene055647 | MS.gene77828 | 0.886717 | 2.68E-72 | -1.69E-46 |
| MS.gene055722 | MS.gene77828 | 0.928537 | 2.51E-92 | -1.69E-46 |
| MS.gene055748 | MS.gene77828 | 0.851875 | 6.67E-61 | -1.69E-46 |
| MS.gene055750 | MS.gene77828 | 0.862843 | 3.80E-64 | -1.69E-46 |
| MS.gene055751 | MS.gene77828 | 0.857019 | 2.17E-62 | -1.69E-46 |
| MS.gene055776 | MS.gene77828 | 0.869587 | 2.77E-66 | -1.69E-46 |
| MS.gene05589 | MS.gene77828 | 0.851964 | 6.30E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene77828 | 0.902448 | 9.60E-79 | -1.69E-46 |
| MS.gene055941 | MS.gene77828 | 0.880074 | 7.40E-70 | -1.69E-46 |
| MS.gene055942 | MS.gene77828 | -0.800301 | 1.54E-48 | -1.69E-46 |
| MS.gene055956 | MS.gene77828 | -0.834826 | 2.39E-56 | -1.69E-46 |
| MS.gene056040 | MS.gene77828 | 0.807872 | 4.09E-50 | -1.69E-46 |
| MS.gene056046 | MS.gene77828 | 0.805602 | 1.23E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene77828 | 0.862353 | 5.38E-64 | -1.69E-46 |
| MS.gene056166 | MS.gene77828 | 0.817602 | 3.03E-52 | -1.69E-46 |
| MS.gene056359 | MS.gene77828 | -0.800233 | 1.59E-48 | -1.69E-46 |
| MS.gene056374 | MS.gene77828 | 0.895071 | 1.36E-75 | -1.69E-46 |
| MS.gene056409 | MS.gene77828 | 0.805787 | 1.13E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene77828 | 0.840187 | 1.01E-57 | -1.69E-46 |
| MS.gene056446 | MS.gene77828 | 0.820287 | 7.43E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene77828 | 0.836065 | 1.16E-56 | -1.69E-46 |
| MS.gene056449 | MS.gene77828 | 0.827663 | 1.38E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene77828 | 0.826563 | 2.53E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene77828 | 0.895503 | 9.01E-76 | -1.69E-46 |
| MS.gene056510 | MS.gene77828 | 0.90265 | 7.80E-79 | -1.69E-46 |
| MS.gene056511 | MS.gene77828 | 0.816134 | 6.47E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene77828 | 0.829265 | 5.67E-55 | -1.69E-46 |
| MS.gene056610 | MS.gene77828 | 0.813189 | 2.90E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene77828 | 0.930178 | 2.39E-93 | -1.69E-46 |
| MS.gene056692 | MS.gene77828 | 0.872238 | 3.71E-67 | -1.69E-46 |
| MS.gene056878 | MS.gene77828 | 0.829805 | 4.19E-55 | -1.69E-46 |
| MS.gene056898 | MS.gene77828 | 0.816918 | 4.32E-52 | -1.69E-46 |
| MS.gene056946 | MS.gene77828 | 0.807477 | 4.96E-50 | -1.69E-46 |
| MS.gene056947 | MS.gene77828 | 0.817664 | 2.93E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene77828 | 0.812863 | 3.42E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene77828 | 0.903276 | 4.10E-79 | -1.69E-46 |
| MS.gene057086 | MS.gene77828 | 0.821675 | 3.56E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene77828 | 0.861093 | 1.31E-63 | -1.69E-46 |
| MS.gene057146 | MS.gene77828 | 0.812753 | 3.62E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene77828 | 0.933585 | 1.50E-95 | -1.69E-46 |
| MS.gene057416 | MS.gene77828 | 0.916958 | 9.51E-86 | -1.69E-46 |
| MS.gene057658 | MS.gene77828 | 0.821356 | 4.22E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene77828 | 0.825958 | 3.53E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene77828 | 0.85613 | 3.96E-62 | -1.69E-46 |
| MS.gene057856 | MS.gene77828 | 0.811733 | 6.04E-51 | -1.69E-46 |
| MS.gene057857 | MS.gene77828 | 0.819531 | 1.11E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene77828 | 0.826591 | 2.49E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene77828 | 0.833679 | 4.64E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene77828 | 0.806241 | 9.05E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene77828 | 0.863489 | 2.40E-64 | -1.69E-46 |
| MS.gene058130 | MS.gene77828 | 0.852604 | 4.14E-61 | -1.69E-46 |
| MS.gene058323 | MS.gene77828 | 0.858378 | 8.59E-63 | -1.69E-46 |
| MS.gene058335 | MS.gene77828 | 0.803469 | 3.43E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene77828 | 0.869342 | 3.33E-66 | -1.69E-46 |
| MS.gene05837 | MS.gene77828 | 0.896123 | 4.99E-76 | -1.69E-46 |
| MS.gene058419 | MS.gene77828 | 0.932562 | 7.07E-95 | -1.69E-46 |
| MS.gene058459 | MS.gene77828 | 0.808993 | 2.36E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene77828 | 0.872825 | 2.36E-67 | -1.69E-46 |
| MS.gene058719 | MS.gene77828 | 0.810962 | 8.88E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene77828 | 0.885077 | 1.11E-71 | -1.69E-46 |
| MS.gene058773 | MS.gene77828 | 0.916041 | 2.87E-85 | -1.69E-46 |
| MS.gene058838 | MS.gene77828 | 0.861144 | 1.26E-63 | -1.69E-46 |
| MS.gene05883 | MS.gene77828 | 0.837579 | 4.78E-57 | -1.69E-46 |
| MS.gene058840 | MS.gene77828 | -0.813379 | 2.64E-51 | -1.69E-46 |
| MS.gene058978 | MS.gene77828 | -0.831238 | 1.87E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene77828 | 0.932478 | 8.02E-95 | -1.69E-46 |
| MS.gene059023 | MS.gene77828 | 0.882518 | 9.74E-71 | -1.69E-46 |
| MS.gene059029 | MS.gene77828 | 0.887165 | 1.81E-72 | -1.69E-46 |
| MS.gene05913 | MS.gene77828 | 0.882237 | 1.23E-70 | -1.69E-46 |
| MS.gene059305 | MS.gene77828 | 0.818308 | 2.10E-52 | -1.69E-46 |
| MS.gene05934 | MS.gene77828 | 0.837474 | 5.09E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene77828 | 0.857376 | 1.70E-62 | -1.69E-46 |
| MS.gene059368 | MS.gene77828 | 0.816162 | 6.37E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene77828 | 0.825291 | 5.08E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene77828 | 0.830681 | 2.56E-55 | -1.69E-46 |
| MS.gene059667 | MS.gene77828 | 0.83055 | 2.76E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene77828 | 0.920849 | 7.59E-88 | -1.69E-46 |
| MS.gene059680 | MS.gene77828 | 0.813962 | 1.96E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene77828 | 0.843621 | 1.25E-58 | -1.69E-46 |
| MS.gene059718 | MS.gene77828 | 0.919256 | 5.65E-87 | -1.69E-46 |
| MS.gene059756 | MS.gene77828 | 0.872616 | 2.77E-67 | -1.69E-46 |
| MS.gene059801 | MS.gene77828 | 0.84247 | 2.54E-58 | -1.69E-46 |
| MS.gene059837 | MS.gene77828 | 0.813287 | 2.76E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene77828 | 0.903782 | 2.43E-79 | -1.69E-46 |
| MS.gene059902 | MS.gene77828 | 0.869456 | 3.05E-66 | -1.69E-46 |
| MS.gene059960 | MS.gene77828 | 0.850698 | 1.44E-60 | -1.69E-46 |
| MS.gene06000 | MS.gene77828 | 0.825323 | 4.99E-54 | -1.69E-46 |
| MS.gene060193 | MS.gene77828 | 0.833781 | 4.38E-56 | -1.69E-46 |
| MS.gene060337 | MS.gene77828 | -0.800186 | 1.62E-48 | -1.69E-46 |
| MS.gene060341 | MS.gene77828 | 0.800368 | 1.49E-48 | -1.69E-46 |
| MS.gene060356 | MS.gene77828 | 0.810503 | 1.12E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene77828 | 0.860239 | 2.37E-63 | -1.69E-46 |
| MS.gene060595 | MS.gene77828 | -0.80504 | 1.62E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene77828 | 0.867358 | 1.45E-65 | -1.69E-46 |
| MS.gene060728 | MS.gene77828 | 0.83118 | 1.93E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene77828 | 0.876719 | 1.12E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene77828 | 0.869773 | 2.41E-66 | -1.69E-46 |
| MS.gene06077 | MS.gene77828 | 0.896072 | 5.24E-76 | -1.69E-46 |
| MS.gene060804 | MS.gene77828 | 0.852766 | 3.72E-61 | -1.69E-46 |
| MS.gene060818 | MS.gene77828 | 0.842372 | 2.69E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene77828 | 0.88935 | 2.62E-73 | -1.69E-46 |
| MS.gene060837 | MS.gene77828 | 0.842686 | 2.22E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene77828 | 0.879929 | 8.34E-70 | -1.69E-46 |
| MS.gene06097 | MS.gene77828 | 0.800316 | 1.53E-48 | -1.69E-46 |
| MS.gene060982 | MS.gene77828 | 0.874916 | 4.65E-68 | -1.69E-46 |
| MS.gene061041 | MS.gene77828 | 0.829081 | 6.28E-55 | -1.69E-46 |
| MS.gene061134 | MS.gene77828 | 0.856876 | 2.39E-62 | -1.69E-46 |
| MS.gene061150 | MS.gene77828 | 0.887483 | 1.37E-72 | -1.69E-46 |
| MS.gene061171 | MS.gene77828 | 0.839187 | 1.84E-57 | -1.69E-46 |
| MS.gene061200 | MS.gene77828 | 0.868146 | 8.11E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77828.t1 | MTR_5g098785 | 82.482 | 274 | 2 | 1 | 1 | 228 | 1 | 274 | 8.96e-157 | 436 |
| MS.gene77828.t1 | MTR_5g098780 | 81.250 | 272 | 7 | 1 | 1 | 228 | 1 | 272 | 1.61e-153 | 427 |
| MS.gene77828.t1 | MTR_5g098770 | 94.505 | 91 | 5 | 0 | 138 | 228 | 1 | 91 | 5.95e-56 | 173 |
| MS.gene77828.t1 | MTR_3g101670 | 45.854 | 205 | 92 | 8 | 27 | 228 | 74 | 262 | 8.68e-49 | 161 |
| MS.gene77828.t1 | MTR_3g435460 | 42.453 | 212 | 89 | 8 | 23 | 228 | 4 | 188 | 1.26e-39 | 135 |
| MS.gene77828.t1 | MTR_8g023790 | 41.176 | 204 | 101 | 6 | 27 | 228 | 79 | 265 | 3.17e-39 | 136 |
| MS.gene77828.t1 | MTR_3g435460 | 42.788 | 208 | 86 | 8 | 27 | 228 | 69 | 249 | 9.62e-39 | 135 |
| MS.gene77828.t1 | MTR_2g042720 | 39.904 | 208 | 98 | 7 | 27 | 228 | 78 | 264 | 5.24e-36 | 128 |
| MS.gene77828.t1 | MTR_6g011870 | 39.320 | 206 | 90 | 9 | 28 | 223 | 73 | 253 | 9.62e-31 | 114 |
| MS.gene77828.t1 | MTR_6g011880 | 39.320 | 206 | 90 | 9 | 28 | 223 | 73 | 253 | 9.72e-31 | 114 |
| MS.gene77828.t1 | MTR_5g097280 | 41.063 | 207 | 87 | 10 | 27 | 223 | 72 | 253 | 1.19e-30 | 114 |
| MS.gene77828.t1 | MTR_6g012110 | 38.835 | 206 | 91 | 9 | 28 | 223 | 73 | 253 | 1.60e-30 | 114 |
| MS.gene77828.t1 | MTR_6g011890 | 39.320 | 206 | 90 | 9 | 28 | 223 | 73 | 253 | 1.91e-30 | 113 |
| MS.gene77828.t1 | MTR_4g094605 | 39.320 | 206 | 90 | 9 | 28 | 223 | 74 | 254 | 2.04e-30 | 113 |
| MS.gene77828.t1 | MTR_2g081090 | 39.130 | 207 | 93 | 8 | 27 | 223 | 42 | 225 | 3.03e-30 | 112 |
| MS.gene77828.t1 | MTR_2g081090 | 38.647 | 207 | 94 | 8 | 27 | 223 | 69 | 252 | 4.70e-30 | 112 |
| MS.gene77828.t1 | MTR_6g012080 | 38.350 | 206 | 92 | 9 | 28 | 223 | 73 | 253 | 7.64e-30 | 112 |
| MS.gene77828.t1 | MTR_6g060175 | 40.678 | 177 | 79 | 6 | 58 | 228 | 123 | 279 | 5.97e-27 | 105 |
| MS.gene77828.t1 | MTR_1g026550 | 35.484 | 186 | 90 | 5 | 58 | 228 | 157 | 327 | 1.17e-25 | 102 |
| MS.gene77828.t1 | MTR_6g033320 | 40.000 | 170 | 76 | 6 | 58 | 224 | 88 | 234 | 8.32e-25 | 98.2 |
| MS.gene77828.t1 | MTR_6g060175 | 40.116 | 172 | 77 | 6 | 63 | 228 | 118 | 269 | 1.29e-24 | 98.6 |
| MS.gene77828.t1 | MTR_6g043600 | 62.162 | 74 | 27 | 1 | 150 | 223 | 145 | 217 | 3.03e-24 | 96.7 |
| MS.gene77828.t1 | MTR_4g015570 | 30.131 | 229 | 117 | 7 | 12 | 228 | 89 | 286 | 1.38e-19 | 85.5 |
| MS.gene77828.t1 | MTR_2g008610 | 31.053 | 190 | 97 | 8 | 27 | 201 | 79 | 249 | 6.49e-16 | 74.7 |
| MS.gene77828.t1 | MTR_2g436960 | 53.333 | 75 | 30 | 2 | 154 | 228 | 29 | 98 | 8.91e-16 | 70.9 |
| MS.gene77828.t1 | MTR_5g098750 | 57.143 | 63 | 26 | 1 | 165 | 226 | 40 | 102 | 5.11e-15 | 69.3 |
| MS.gene77828.t1 | MTR_3g070340 | 31.100 | 209 | 101 | 7 | 12 | 208 | 92 | 269 | 1.67e-14 | 71.2 |
| MS.gene77828.t1 | MTR_0003s0060 | 47.368 | 76 | 35 | 2 | 153 | 228 | 21 | 91 | 1.39e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77828.t1 | AT1G61520 | 89.474 | 209 | 22 | 0 | 20 | 228 | 7 | 215 | 9.21e-136 | 380 |
| MS.gene77828.t1 | AT1G61520 | 91.584 | 202 | 17 | 0 | 27 | 228 | 69 | 270 | 3.78e-135 | 380 |
| MS.gene77828.t1 | AT1G61520 | 91.584 | 202 | 17 | 0 | 27 | 228 | 69 | 270 | 3.78e-135 | 380 |
| MS.gene77828.t1 | AT1G45474 | 43.750 | 192 | 94 | 7 | 41 | 228 | 70 | 251 | 6.85e-45 | 150 |
| MS.gene77828.t1 | AT1G45474 | 43.750 | 192 | 94 | 7 | 41 | 228 | 70 | 251 | 6.85e-45 | 150 |
| MS.gene77828.t1 | AT3G47470 | 43.523 | 193 | 77 | 7 | 41 | 228 | 85 | 250 | 5.91e-39 | 135 |
| MS.gene77828.t1 | AT3G61470 | 41.176 | 204 | 101 | 6 | 27 | 228 | 68 | 254 | 8.52e-38 | 132 |
| MS.gene77828.t1 | AT1G19150 | 37.745 | 204 | 108 | 6 | 27 | 228 | 81 | 267 | 8.78e-33 | 120 |
| MS.gene77828.t1 | AT5G54270 | 39.320 | 206 | 92 | 8 | 28 | 223 | 71 | 253 | 1.14e-30 | 114 |
| MS.gene77828.t1 | AT2G05070 | 40.976 | 205 | 86 | 10 | 29 | 223 | 74 | 253 | 1.57e-30 | 114 |
| MS.gene77828.t1 | AT2G05100 | 40.976 | 205 | 86 | 10 | 29 | 223 | 74 | 253 | 1.86e-30 | 114 |
| MS.gene77828.t1 | AT3G27690 | 40.488 | 205 | 87 | 10 | 29 | 223 | 107 | 286 | 5.61e-30 | 113 |
| MS.gene77828.t1 | AT3G27690 | 40.488 | 205 | 87 | 10 | 29 | 223 | 75 | 254 | 5.96e-30 | 112 |
| MS.gene77828.t1 | AT2G34430 | 38.835 | 206 | 92 | 8 | 28 | 223 | 73 | 254 | 2.25e-29 | 110 |
| MS.gene77828.t1 | AT2G34420 | 38.835 | 206 | 92 | 8 | 28 | 223 | 72 | 253 | 2.28e-29 | 110 |
| MS.gene77828.t1 | AT1G29930 | 38.835 | 206 | 92 | 8 | 28 | 223 | 74 | 255 | 3.94e-29 | 110 |
| MS.gene77828.t1 | AT1G29920 | 38.835 | 206 | 92 | 8 | 28 | 223 | 74 | 255 | 4.07e-29 | 110 |
| MS.gene77828.t1 | AT1G29910 | 38.835 | 206 | 92 | 8 | 28 | 223 | 74 | 255 | 4.07e-29 | 110 |
| MS.gene77828.t1 | AT4G10340 | 43.503 | 177 | 74 | 6 | 58 | 228 | 114 | 270 | 2.60e-28 | 108 |
| MS.gene77828.t1 | AT3G54890 | 40.000 | 170 | 76 | 6 | 58 | 224 | 87 | 233 | 1.78e-25 | 100 |
| MS.gene77828.t1 | AT1G76570 | 33.333 | 186 | 94 | 5 | 58 | 228 | 155 | 325 | 1.62e-23 | 96.7 |
| MS.gene77828.t1 | AT5G01530 | 30.131 | 229 | 117 | 7 | 12 | 228 | 90 | 287 | 2.75e-20 | 87.4 |
| MS.gene77828.t1 | AT3G08940 | 30.568 | 229 | 116 | 7 | 12 | 228 | 87 | 284 | 5.74e-20 | 86.3 |
| MS.gene77828.t1 | AT2G05100 | 37.173 | 191 | 85 | 10 | 29 | 209 | 74 | 239 | 1.22e-19 | 85.9 |
| MS.gene77828.t1 | AT5G28450 | 43.137 | 102 | 55 | 2 | 128 | 228 | 71 | 170 | 6.23e-17 | 75.9 |
| MS.gene77828.t1 | AT1G15820 | 30.526 | 190 | 98 | 9 | 27 | 201 | 76 | 246 | 1.54e-13 | 68.2 |
| MS.gene77828.t1 | AT2G40100 | 34.375 | 160 | 71 | 5 | 58 | 212 | 141 | 271 | 3.45e-12 | 64.7 |
| MS.gene77828.t1 | AT3G54890 | 35.338 | 133 | 61 | 5 | 58 | 188 | 87 | 196 | 4.86e-12 | 63.5 |
Find 77 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGCTTTGCCGAGAATTTC+AGG | 0.135748 | 5.1:+80090067 | None:intergenic |
| GTTAGCTATGTTGGCAATAT+TGG | 0.175999 | 5.1:-80089726 | MS.gene77828:CDS |
| TTTGTTCAAGCTCTTGTTAC+AGG | 0.246233 | 5.1:-80089698 | MS.gene77828:CDS |
| ATATTTAACCCTCTTGGTTT+TGG | 0.269352 | 5.1:-80089803 | MS.gene77828:CDS |
| ATGGGAAAACAATACTTCTT+AGG | 0.280187 | 5.1:-80089878 | MS.gene77828:CDS |
| CCAGATGATCTAAGAGGTTT+TGG | 0.293540 | 5.1:+80089663 | None:intergenic |
| TTAGCTATGTTGGCAATATT+GGG | 0.350553 | 5.1:-80089725 | MS.gene77828:CDS |
| AGATCACTCCCATCTTCAAT+AGG | 0.372428 | 5.1:-80091418 | MS.gene77828:CDS |
| TTAGGACTTGAGAAAGGTCT+TGG | 0.373705 | 5.1:-80089860 | MS.gene77828:CDS |
| CCAAAACCTCTTAGATCATC+TGG | 0.385529 | 5.1:-80089663 | MS.gene77828:CDS |
| AATGAATCCACCAGTTCCTT+CGG | 0.395198 | 5.1:+80090165 | None:intergenic |
| GAGAAAGGTCTTGGAGGTTC+CGG | 0.403381 | 5.1:-80089851 | MS.gene77828:CDS |
| GGACCTATATTTAACCCTCT+TGG | 0.406735 | 5.1:-80089809 | MS.gene77828:CDS |
| GAATGGAAGGTTAGCTATGT+TGG | 0.408440 | 5.1:-80089735 | MS.gene77828:CDS |
| CAAGCTCTTGTTACAGGAGT+TGG | 0.415706 | 5.1:-80089692 | MS.gene77828:CDS |
| CTGCAGGAACATACAACTAC+TGG | 0.419959 | 5.1:-80089991 | MS.gene77828:CDS |
| TGTGATGGAAATGGCATTCA+TGG | 0.422186 | 5.1:-80089948 | MS.gene77828:CDS |
| AGCCAGGATTGTACCAATCT+TGG | 0.425513 | 5.1:+80089903 | None:intergenic |
| CAACGGCCGCTTCGCAATGT+TGG | 0.427513 | 5.1:-80090110 | MS.gene77828:CDS |
| CAGGTGGAATCACGCCGGTT+TGG | 0.428037 | 5.1:+80090011 | None:intergenic |
| ATGAATCCACCAGTTCCTTC+GGG | 0.429905 | 5.1:+80090166 | None:intergenic |
| AACGGCCGCTTCGCAATGTT+GGG | 0.433209 | 5.1:-80090109 | MS.gene77828:CDS |
| CTAGAAGACCCTATTGAAGA+TGG | 0.437182 | 5.1:+80091409 | None:intergenic |
| CACACTCTTTGTGATGGAAA+TGG | 0.442080 | 5.1:-80089957 | MS.gene77828:CDS |
| GTCAAGATGTTGTTGTTGAC+AGG | 0.444048 | 5.1:+80089635 | None:intergenic |
| TCAATAGGGTCTTCTAGAAA+AGG | 0.446420 | 5.1:-80091403 | MS.gene77828:intron |
| AAACCAAGAGGGTTAAATAT+AGG | 0.452200 | 5.1:+80089806 | None:intergenic |
| TTCGCAATGTTGGGAGCAGC+CGG | 0.465502 | 5.1:-80090100 | MS.gene77828:CDS |
| AACACAGAAGATTCCAAGAT+TGG | 0.467039 | 5.1:-80089916 | MS.gene77828:CDS |
| CTTTCAGATCCCGAAGGAAC+TGG | 0.478080 | 5.1:-80090175 | MS.gene77828:CDS |
| TCGCCATATGCTAACCATCT+TGG | 0.478129 | 5.1:+80090139 | None:intergenic |
| AAGCTGAAGGAAGTTAAGAA+TGG | 0.479661 | 5.1:-80089752 | MS.gene77828:CDS |
| GCTATAGCACCTGAAATTCT+CGG | 0.489754 | 5.1:-80090076 | MS.gene77828:CDS |
| CCGCGGAAACAGCACTCCCT+TGG | 0.495161 | 5.1:-80090036 | MS.gene77828:CDS |
| CCTGAAATTCTCGGCAAAGC+AGG | 0.501852 | 5.1:-80090067 | MS.gene77828:CDS |
| CATTTAGTGGAACTTGAGAC+TGG | 0.504734 | 5.1:+80089613 | None:intergenic |
| GCACTCCCTTGGTTCCAAAC+CGG | 0.505888 | 5.1:-80090025 | MS.gene77828:CDS |
| TTGGTACAATCCTGGCTCCA+TGG | 0.508162 | 5.1:-80089897 | MS.gene77828:CDS |
| GTGGATTCATTGAGCCAAGA+TGG | 0.509728 | 5.1:-80090153 | MS.gene77828:CDS |
| GATCACTCCCATCTTCAATA+GGG | 0.512694 | 5.1:-80091417 | MS.gene77828:CDS |
| GAGCCAAGATGGTTAGCATA+TGG | 0.514212 | 5.1:-80090142 | MS.gene77828:CDS |
| GAGGCTGTGAGACAGAGTCT+TGG | 0.514771 | 5.1:-80091445 | MS.gene77828:CDS |
| GGACTTGAGAAAGGTCTTGG+AGG | 0.517064 | 5.1:-80089857 | MS.gene77828:CDS |
| TAAAGATGAGAAATCATTGA+AGG | 0.521323 | 5.1:-80089780 | MS.gene77828:CDS |
| ATAGGTCCACCAGGGTAAGC+TGG | 0.522001 | 5.1:+80089824 | None:intergenic |
| TGAAGGAAGTTAAGAATGGA+AGG | 0.527760 | 5.1:-80089748 | MS.gene77828:CDS |
| CAGTAGTTGTATGTTCCTGC+AGG | 0.533860 | 5.1:+80089992 | None:intergenic |
| TTCCAAGATTGGTACAATCC+TGG | 0.536164 | 5.1:-80089905 | MS.gene77828:CDS |
| AATTTCAGGTGCTATAGCTC+CGG | 0.537587 | 5.1:+80090081 | None:intergenic |
| CAAGGGAGTGCTGTTTCCGC+GGG | 0.537601 | 5.1:+80090037 | None:intergenic |
| ATCACGCCGGTTTGGAACCA+AGG | 0.543476 | 5.1:+80090019 | None:intergenic |
| ACCAGGGTAAGCTGGTTCGC+CGG | 0.543633 | 5.1:+80089832 | None:intergenic |
| TAGAAGACCCTATTGAAGAT+GGG | 0.548284 | 5.1:+80091410 | None:intergenic |
| CCAAGGGAGTGCTGTTTCCG+CGG | 0.549385 | 5.1:+80090036 | None:intergenic |
| TACTTCTTAGGACTTGAGAA+AGG | 0.549404 | 5.1:-80089866 | MS.gene77828:CDS |
| TAGTTGTATGTTCCTGCAGG+TGG | 0.570487 | 5.1:+80089995 | None:intergenic |
| ACCGGCGTGATTCCACCTGC+AGG | 0.575662 | 5.1:-80090007 | MS.gene77828:CDS |
| TGGTACAATCCTGGCTCCAT+GGG | 0.575675 | 5.1:-80089896 | MS.gene77828:CDS |
| GGGTTAAATATAGGTCCACC+AGG | 0.578557 | 5.1:+80089815 | None:intergenic |
| TAACTACACACTCTTTGTGA+TGG | 0.580645 | 5.1:-80089963 | MS.gene77828:CDS |
| GTGATGGAAATGGCATTCAT+GGG | 0.581162 | 5.1:-80089947 | MS.gene77828:CDS |
| ATTGAAGGAGTTAAAGCTGA+AGG | 0.587176 | 5.1:-80089765 | MS.gene77828:CDS |
| CATCTTTACCAAAACCAAGA+GGG | 0.593825 | 5.1:+80089795 | None:intergenic |
| GGTCAGCCAGATGATCTAAG+AGG | 0.611676 | 5.1:+80089657 | None:intergenic |
| TGCAGGAACATACAACTACT+GGG | 0.614884 | 5.1:-80089990 | MS.gene77828:CDS |
| GGCGAACCAGCTTACCCTGG+TGG | 0.618672 | 5.1:-80089830 | MS.gene77828:CDS |
| TCAGATCCCGAAGGAACTGG+TGG | 0.619183 | 5.1:-80090172 | MS.gene77828:CDS |
| TCCGGCGAACCAGCTTACCC+TGG | 0.621275 | 5.1:-80089833 | MS.gene77828:CDS |
| TCACGCCGGTTTGGAACCAA+GGG | 0.621949 | 5.1:+80090020 | None:intergenic |
| CAAAGCAGGTTTAATTCCCG+CGG | 0.641267 | 5.1:-80090053 | MS.gene77828:CDS |
| TCAAGATGTTGTTGTTGACA+GGG | 0.645710 | 5.1:+80089636 | None:intergenic |
| TCCTGCAGGTGGAATCACGC+CGG | 0.649684 | 5.1:+80090006 | None:intergenic |
| CTGCTCCCAACATTGCGAAG+CGG | 0.660409 | 5.1:+80090104 | None:intergenic |
| CTAGGACTTTCAGATCCCGA+AGG | 0.660487 | 5.1:-80090181 | MS.gene77828:intron |
| TCATCTTTACCAAAACCAAG+AGG | 0.664345 | 5.1:+80089794 | None:intergenic |
| GCATATGGCGAGATAATCAA+CGG | 0.667486 | 5.1:-80090127 | MS.gene77828:CDS |
| GGTTAAATATAGGTCCACCA+GGG | 0.744381 | 5.1:+80089816 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATAAAAAATAAAAAAT+TGG | + | chr5.1:80090480-80090499 | None:intergenic | 0.0% |
| !!! | TTTATTTTTTATATTACTTG+TGG | - | chr5.1:80090484-80090503 | MS.gene77828:intron | 10.0% |
| !! | TTGAACAAAAAACTATTGTA+AGG | - | chr5.1:80090073-80090092 | MS.gene77828:CDS | 20.0% |
| !!! | AGTATGAAATTGACTTTATT+CGG | - | chr5.1:80090869-80090888 | MS.gene77828:intron | 20.0% |
| !!! | ATAACTTTCTTTTCTCTTTT+TGG | - | chr5.1:80089962-80089981 | MS.gene77828:CDS | 20.0% |
| ! | AACAAAAAACTATTGTAAGG+TGG | - | chr5.1:80090076-80090095 | MS.gene77828:CDS | 25.0% |
| ! | ATCTACATGTTGTAATGTTA+AGG | + | chr5.1:80090422-80090441 | None:intergenic | 25.0% |
| ! | ATGTTGTATAGTTGTGTTAT+GGG | + | chr5.1:80090808-80090827 | None:intergenic | 25.0% |
| ! | CAATCACTTGTCTAAATATT+TGG | + | chr5.1:80090747-80090766 | None:intergenic | 25.0% |
| ! | CTTGATTAAACTGTTTACTT+AGG | + | chr5.1:80090138-80090157 | None:intergenic | 25.0% |
| ! | TAAAGATGAGAAATCATTGA+AGG | - | chr5.1:80091339-80091358 | MS.gene77828:intron | 25.0% |
| ! | TCTACATGTTGTAATGTTAA+GGG | + | chr5.1:80090421-80090440 | None:intergenic | 25.0% |
| ! | TGTCTTTAGATTATTTCGAT+AGG | + | chr5.1:80090681-80090700 | None:intergenic | 25.0% |
| !!! | AGTTTTTTGTTCAACTACTA+AGG | + | chr5.1:80090067-80090086 | None:intergenic | 25.0% |
| AAAAATCTCAAAAGCCTTCT+AGG | + | chr5.1:80090546-80090565 | None:intergenic | 30.0% | |
| AAAATCTCAAAAGCCTTCTA+GGG | + | chr5.1:80090545-80090564 | None:intergenic | 30.0% | |
| AAACCAAGAGGGTTAAATAT+AGG | + | chr5.1:80091316-80091335 | None:intergenic | 30.0% | |
| AAAGCAAAGTCTTTCTTACT+TGG | - | chr5.1:80090027-80090046 | MS.gene77828:CDS | 30.0% | |
| ATATTACAACTGTCTCATGT+GGG | - | chr5.1:80089849-80089868 | MS.gene77828:CDS | 30.0% | |
| ATGGGAAAACAATACTTCTT+AGG | - | chr5.1:80091241-80091260 | MS.gene77828:intron | 30.0% | |
| ATGTAGATATGCAACTTTGT+TGG | - | chr5.1:80090434-80090453 | MS.gene77828:intron | 30.0% | |
| ATTGTGTTAGAACATAAGCT+TGG | - | chr5.1:80090763-80090782 | MS.gene77828:intron | 30.0% | |
| CATGTTGTATAGTTGTGTTA+TGG | + | chr5.1:80090809-80090828 | None:intergenic | 30.0% | |
| TTACTTGTGGTAACTTTGTA+TGG | - | chr5.1:80090497-80090516 | MS.gene77828:intron | 30.0% | |
| TTAGCTATGTTGGCAATATT+GGG | - | chr5.1:80091394-80091413 | MS.gene77828:intron | 30.0% | |
| TTGTATATTTGTCAGTTCAG+TGG | + | chr5.1:80089915-80089934 | None:intergenic | 30.0% | |
| ! | ATATTTAACCCTCTTGGTTT+TGG | - | chr5.1:80091316-80091335 | MS.gene77828:intron | 30.0% |
| !!! | TAAGAAGTATTGTTTTCCCA+TGG | + | chr5.1:80091242-80091261 | None:intergenic | 30.0% |
| AACACAGAAGATTCCAAGAT+TGG | - | chr5.1:80091203-80091222 | MS.gene77828:intron | 35.0% | |
| AAGCTGAAGGAAGTTAAGAA+TGG | - | chr5.1:80091367-80091386 | MS.gene77828:intron | 35.0% | |
| AGAACATAAGCTTGGATACT+TGG | - | chr5.1:80090771-80090790 | MS.gene77828:intron | 35.0% | |
| ATGGAGCAAATAGACAATTG+TGG | - | chr5.1:80089996-80090015 | MS.gene77828:CDS | 35.0% | |
| ATTGAAGGAGTTAAAGCTGA+AGG | - | chr5.1:80091354-80091373 | MS.gene77828:intron | 35.0% | |
| CAAAGTCTTTCTTACTTGGA+TGG | - | chr5.1:80090031-80090050 | MS.gene77828:CDS | 35.0% | |
| CACATGAGACAGTTGTAATA+TGG | + | chr5.1:80089850-80089869 | None:intergenic | 35.0% | |
| CATATTACAACTGTCTCATG+TGG | - | chr5.1:80089848-80089867 | MS.gene77828:CDS | 35.0% | |
| CATCTTTACCAAAACCAAGA+GGG | + | chr5.1:80091327-80091346 | None:intergenic | 35.0% | |
| GTTAGCTATGTTGGCAATAT+TGG | - | chr5.1:80091393-80091412 | MS.gene77828:intron | 35.0% | |
| TAACTACACACTCTTTGTGA+TGG | - | chr5.1:80091156-80091175 | MS.gene77828:intron | 35.0% | |
| TACTTCTTAGGACTTGAGAA+AGG | - | chr5.1:80091253-80091272 | MS.gene77828:intron | 35.0% | |
| TAGAAGACCCTATTGAAGAT+GGG | + | chr5.1:80089712-80089731 | None:intergenic | 35.0% | |
| TCATCTTTACCAAAACCAAG+AGG | + | chr5.1:80091328-80091347 | None:intergenic | 35.0% | |
| TGAAGGAAGTTAAGAATGGA+AGG | - | chr5.1:80091371-80091390 | MS.gene77828:intron | 35.0% | |
| TGTTTACTTAGGCATACTCT+AGG | + | chr5.1:80090127-80090146 | None:intergenic | 35.0% | |
| TTTGTTCAAGCTCTTGTTAC+AGG | - | chr5.1:80091421-80091440 | MS.gene77828:CDS | 35.0% | |
| ! | AAAAGGTTCCTTTGTTGTCA+AGG | - | chr5.1:80089733-80089752 | MS.gene77828:CDS | 35.0% |
| ! | TCAAGATGTTGTTGTTGACA+GGG | + | chr5.1:80091486-80091505 | None:intergenic | 35.0% |
| ! | TCAATAGGGTCTTCTAGAAA+AGG | - | chr5.1:80089716-80089735 | MS.gene77828:CDS | 35.0% |
| !! | TGATCTAAGAGGTTTTGGTA+TGG | + | chr5.1:80091454-80091473 | None:intergenic | 35.0% |
| !!! | CTTTTTGGTGTTCAGCAAAA+TGG | - | chr5.1:80089977-80089996 | MS.gene77828:CDS | 35.0% |
| AATGAATCCACCAGTTCCTT+CGG | + | chr5.1:80090957-80090976 | None:intergenic | 40.0% | |
| AGATCACTCCCATCTTCAAT+AGG | - | chr5.1:80089701-80089720 | MS.gene77828:CDS | 40.0% | |
| CCAAAACCTCTTAGATCATC+TGG | - | chr5.1:80091456-80091475 | MS.gene77828:CDS | 40.0% | |
| CTAGAAGACCCTATTGAAGA+TGG | + | chr5.1:80089713-80089732 | None:intergenic | 40.0% | |
| GATCACTCCCATCTTCAATA+GGG | - | chr5.1:80089702-80089721 | MS.gene77828:CDS | 40.0% | |
| GCATATGGCGAGATAATCAA+CGG | - | chr5.1:80090992-80091011 | MS.gene77828:intron | 40.0% | |
| GCTATAGCACCTGAAATTCT+CGG | - | chr5.1:80091043-80091062 | MS.gene77828:intron | 40.0% | |
| GGACCTATATTTAACCCTCT+TGG | - | chr5.1:80091310-80091329 | MS.gene77828:intron | 40.0% | |
| GGTTAAATATAGGTCCACCA+GGG | + | chr5.1:80091306-80091325 | None:intergenic | 40.0% | |
| GTCTTTCTTACTTGGATGGA+AGG | - | chr5.1:80090035-80090054 | MS.gene77828:CDS | 40.0% | |
| TGCAGGAACATACAACTACT+GGG | - | chr5.1:80091129-80091148 | MS.gene77828:intron | 40.0% | |
| TTAGGACTTGAGAAAGGTCT+TGG | - | chr5.1:80091259-80091278 | MS.gene77828:intron | 40.0% | |
| TTATGCAAGTGCATGTGTTG+AGG | - | chr5.1:80090363-80090382 | MS.gene77828:intron | 40.0% | |
| TTCCAAGATTGGTACAATCC+TGG | - | chr5.1:80091214-80091233 | MS.gene77828:intron | 40.0% | |
| TTTGAGTGAGAGATAGACCT+TGG | + | chr5.1:80089777-80089796 | None:intergenic | 40.0% | |
| ! | AATTTCAGGTGCTATAGCTC+CGG | + | chr5.1:80091041-80091060 | None:intergenic | 40.0% |
| ! | CACACTCTTTGTGATGGAAA+TGG | - | chr5.1:80091162-80091181 | MS.gene77828:intron | 40.0% |
| ! | CCAGATGATCTAAGAGGTTT+TGG | + | chr5.1:80091459-80091478 | None:intergenic | 40.0% |
| ! | GAATGGAAGGTTAGCTATGT+TGG | - | chr5.1:80091384-80091403 | MS.gene77828:intron | 40.0% |
| ! | GTCAAGATGTTGTTGTTGAC+AGG | + | chr5.1:80091487-80091506 | None:intergenic | 40.0% |
| ! | GTGATGGAAATGGCATTCAT+GGG | - | chr5.1:80091172-80091191 | MS.gene77828:intron | 40.0% |
| ! | TGTGAGTCTAAAACCCTAGA+AGG | - | chr5.1:80090529-80090548 | MS.gene77828:intron | 40.0% |
| ! | TGTGATGGAAATGGCATTCA+TGG | - | chr5.1:80091171-80091190 | MS.gene77828:intron | 40.0% |
| !! | ATCTCTTACTTTTGCAGCTG+AGG | - | chr5.1:80089655-80089674 | MS.gene77828:CDS | 40.0% |
| AGAAGCTGCCTTGACAACAA+AGG | + | chr5.1:80089744-80089763 | None:intergenic | 45.0% | |
| AGCCAGGATTGTACCAATCT+TGG | + | chr5.1:80091219-80091238 | None:intergenic | 45.0% | |
| ATGAATCCACCAGTTCCTTC+GGG | + | chr5.1:80090956-80090975 | None:intergenic | 45.0% | |
| CAAAGCAGGTTTAATTCCCG+CGG | - | chr5.1:80091066-80091085 | MS.gene77828:intron | 45.0% | |
| CAAATCCAAAGTCACCAGGA+AGG | + | chr5.1:80090913-80090932 | None:intergenic | 45.0% | |
| CAAGCTCTTGTTACAGGAGT+TGG | - | chr5.1:80091427-80091446 | MS.gene77828:CDS | 45.0% | |
| CAGTAGTTGTATGTTCCTGC+AGG | + | chr5.1:80091130-80091149 | None:intergenic | 45.0% | |
| CTGCAGGAACATACAACTAC+TGG | - | chr5.1:80091128-80091147 | MS.gene77828:intron | 45.0% | |
| GACTTTGGATTTGACCCTCT+AGG | - | chr5.1:80090920-80090939 | MS.gene77828:intron | 45.0% | |
| GAGCCAAGATGGTTAGCATA+TGG | - | chr5.1:80090977-80090996 | MS.gene77828:intron | 45.0% | |
| GGGTTAAATATAGGTCCACC+AGG | + | chr5.1:80091307-80091326 | None:intergenic | 45.0% | |
| GTGGATTCATTGAGCCAAGA+TGG | - | chr5.1:80090966-80090985 | MS.gene77828:intron | 45.0% | |
| TAGTTGTATGTTCCTGCAGG+TGG | + | chr5.1:80091127-80091146 | None:intergenic | 45.0% | |
| TCGCCATATGCTAACCATCT+TGG | + | chr5.1:80090983-80091002 | None:intergenic | 45.0% | |
| ! | TATTGTTTTCCCATGGAGCC+AGG | + | chr5.1:80091235-80091254 | None:intergenic | 45.0% |
| AGTGAGAGATAGACCTTGGC+AGG | + | chr5.1:80089773-80089792 | None:intergenic | 50.0% | |
| ATCATCACTTGCAGCCTTCC+TGG | - | chr5.1:80090896-80090915 | MS.gene77828:intron | 50.0% | |
| CCTGAAATTCTCGGCAAAGC+AGG | - | chr5.1:80091052-80091071 | MS.gene77828:intron | 50.0% | |
| CCTGCTTTGCCGAGAATTTC+AGG | + | chr5.1:80091055-80091074 | None:intergenic | 50.0% | |
| CGGGATCTGAAAGTCCTAGA+GGG | + | chr5.1:80090937-80090956 | None:intergenic | 50.0% | |
| CTAGGACTTTCAGATCCCGA+AGG | - | chr5.1:80090938-80090957 | MS.gene77828:intron | 50.0% | |
| CTTTCAGATCCCGAAGGAAC+TGG | - | chr5.1:80090944-80090963 | MS.gene77828:intron | 50.0% | |
| GAGAAAGGTCTTGGAGGTTC+CGG | - | chr5.1:80091268-80091287 | MS.gene77828:intron | 50.0% | |
| GGACTTGAGAAAGGTCTTGG+AGG | - | chr5.1:80091262-80091281 | MS.gene77828:intron | 50.0% | |
| GGGTCAAATCCAAAGTCACC+AGG | + | chr5.1:80090917-80090936 | None:intergenic | 50.0% | |
| GGTCAGCCAGATGATCTAAG+AGG | + | chr5.1:80091465-80091484 | None:intergenic | 50.0% | |
| TCGGGATCTGAAAGTCCTAG+AGG | + | chr5.1:80090938-80090957 | None:intergenic | 50.0% | |
| TGGTACAATCCTGGCTCCAT+GGG | - | chr5.1:80091223-80091242 | MS.gene77828:intron | 50.0% | |
| TTGGTACAATCCTGGCTCCA+TGG | - | chr5.1:80091222-80091241 | MS.gene77828:intron | 50.0% | |
| AACGGCCGCTTCGCAATGTT+GGG | - | chr5.1:80091010-80091029 | MS.gene77828:intron | 55.0% | |
| AGCTTCTTCTCCTCCTGCCA+AGG | - | chr5.1:80089757-80089776 | MS.gene77828:CDS | 55.0% | |
| ATAGGTCCACCAGGGTAAGC+TGG | + | chr5.1:80091298-80091317 | None:intergenic | 55.0% | |
| CTGCTCCCAACATTGCGAAG+CGG | + | chr5.1:80091018-80091037 | None:intergenic | 55.0% | |
| GAGAGATAGACCTTGGCAGG+AGG | + | chr5.1:80089770-80089789 | None:intergenic | 55.0% | |
| GAGGCTGTGAGACAGAGTCT+TGG | - | chr5.1:80089674-80089693 | MS.gene77828:CDS | 55.0% | |
| GCACTCCCTTGGTTCCAAAC+CGG | - | chr5.1:80091094-80091113 | MS.gene77828:intron | 55.0% | |
| TCAGATCCCGAAGGAACTGG+TGG | - | chr5.1:80090947-80090966 | MS.gene77828:intron | 55.0% | |
| TGCAGCCTTCCTGGTGACTT+TGG | - | chr5.1:80090905-80090924 | MS.gene77828:intron | 55.0% | |
| TTCGCAATGTTGGGAGCAGC+CGG | - | chr5.1:80091019-80091038 | MS.gene77828:intron | 55.0% | |
| !! | ATCACGCCGGTTTGGAACCA+AGG | + | chr5.1:80091103-80091122 | None:intergenic | 55.0% |
| !! | TCACGCCGGTTTGGAACCAA+GGG | + | chr5.1:80091102-80091121 | None:intergenic | 55.0% |
| CAACGGCCGCTTCGCAATGT+TGG | - | chr5.1:80091009-80091028 | MS.gene77828:intron | 60.0% | |
| TCCTGCAGGTGGAATCACGC+CGG | + | chr5.1:80091116-80091135 | None:intergenic | 60.0% | |
| ! | CAGGTGGAATCACGCCGGTT+TGG | + | chr5.1:80091111-80091130 | None:intergenic | 60.0% |
| !! | ACCAGGGTAAGCTGGTTCGC+CGG | + | chr5.1:80091290-80091309 | None:intergenic | 60.0% |
| !! | CAAGGGAGTGCTGTTTCCGC+GGG | + | chr5.1:80091085-80091104 | None:intergenic | 60.0% |
| !! | CCAAGGGAGTGCTGTTTCCG+CGG | + | chr5.1:80091086-80091105 | None:intergenic | 60.0% |
| ACCGGCGTGATTCCACCTGC+AGG | - | chr5.1:80091112-80091131 | MS.gene77828:intron | 65.0% | |
| CCGCGGAAACAGCACTCCCT+TGG | - | chr5.1:80091083-80091102 | MS.gene77828:intron | 65.0% | |
| GGCGAACCAGCTTACCCTGG+TGG | - | chr5.1:80091289-80091308 | MS.gene77828:intron | 65.0% | |
| TCCGGCGAACCAGCTTACCC+TGG | - | chr5.1:80091286-80091305 | MS.gene77828:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 80089626 | 80091515 | 80089626 | ID=MS.gene77828 |
| chr5.1 | mRNA | 80089626 | 80091515 | 80089626 | ID=MS.gene77828.t1;Parent=MS.gene77828 |
| chr5.1 | exon | 80091404 | 80091515 | 80091404 | ID=MS.gene77828.t1.exon1;Parent=MS.gene77828.t1 |
| chr5.1 | CDS | 80091404 | 80091515 | 80091404 | ID=cds.MS.gene77828.t1;Parent=MS.gene77828.t1 |
| chr5.1 | exon | 80089626 | 80090199 | 80089626 | ID=MS.gene77828.t1.exon2;Parent=MS.gene77828.t1 |
| chr5.1 | CDS | 80089626 | 80090199 | 80089626 | ID=cds.MS.gene77828.t1;Parent=MS.gene77828.t1 |
| Gene Sequence |
| Protein sequence |
