Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0882690 | RHN50881.1 | 68.493 | 73 | 9 | 3 | 1 | 65 | 1 | 67 | 1.50e-17 | 80.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0882690 | A0A2K1ZBE0 | 43.158 | 95 | 36 | 2 | 1 | 83 | 1 | 89 | 3.16e-18 | 82.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa0882690 | 0.815843 | 7.509352e-52 | -8.615850e-47 |
| Msa0014710 | Msa0882690 | 0.800929 | 1.144486e-48 | -8.615850e-47 |
| Msa0018650 | Msa0882690 | 0.805486 | 1.304347e-49 | -8.615850e-47 |
| Msa0028660 | Msa0882690 | 0.801428 | 9.048382e-49 | -8.615850e-47 |
| Msa0037880 | Msa0882690 | 0.803310 | 3.706137e-49 | -8.615850e-47 |
| Msa0039330 | Msa0882690 | 0.831473 | 1.636711e-55 | -8.615850e-47 |
| Msa0043980 | Msa0882690 | 0.827383 | 1.612328e-54 | -8.615850e-47 |
| Msa0048100 | Msa0882690 | 0.802360 | 5.820355e-49 | -8.615850e-47 |
| Msa0050380 | Msa0882690 | 0.826216 | 3.063824e-54 | -8.615850e-47 |
| Msa0068740 | Msa0882690 | -0.800734 | 1.254434e-48 | -8.615850e-47 |
| Msa0075880 | Msa0882690 | 0.816392 | 5.662251e-52 | -8.615850e-47 |
| Msa0078900 | Msa0882690 | 0.800762 | 1.237658e-48 | -8.615850e-47 |
| Msa0090100 | Msa0882690 | 0.811265 | 7.634621e-51 | -8.615850e-47 |
| Msa0092990 | Msa0882690 | 0.809611 | 1.737075e-50 | -8.615850e-47 |
| Msa0095560 | Msa0882690 | 0.811049 | 8.502684e-51 | -8.615850e-47 |
| Msa0102120 | Msa0882690 | 0.805842 | 1.098348e-49 | -8.615850e-47 |
| Msa0114060 | Msa0882690 | 0.812049 | 5.154349e-51 | -8.615850e-47 |
| Msa0117770 | Msa0882690 | 0.813470 | 2.518231e-51 | -8.615850e-47 |
| Msa0607540 | Msa0882690 | 0.851560 | 8.195467e-61 | -8.615850e-47 |
| Msa0610430 | Msa0882690 | 0.844663 | 6.577646e-59 | -8.615850e-47 |
| Msa0620960 | Msa0882690 | 0.830371 | 3.048963e-55 | -8.615850e-47 |
| Msa0626090 | Msa0882690 | 0.814375 | 1.591033e-51 | -8.615850e-47 |
| Msa0647830 | Msa0882690 | 0.827547 | 1.473352e-54 | -8.615850e-47 |
| Msa0653490 | Msa0882690 | 0.829810 | 4.179439e-55 | -8.615850e-47 |
| Msa0660300 | Msa0882690 | 0.800857 | 1.183725e-48 | -8.615850e-47 |
| Msa0661190 | Msa0882690 | -0.801668 | 8.078698e-49 | -8.615850e-47 |
| Msa0661650 | Msa0882690 | 0.804166 | 2.460600e-49 | -8.615850e-47 |
| Msa0662650 | Msa0882690 | 0.819018 | 1.447288e-52 | -8.615850e-47 |
| Msa0669440 | Msa0882690 | 0.800290 | 1.544690e-48 | -8.615850e-47 |
| Msa0672690 | Msa0882690 | 0.803012 | 4.270408e-49 | -8.615850e-47 |
| Msa0673460 | Msa0882690 | 0.818065 | 2.380642e-52 | -8.615850e-47 |
| Msa0679710 | Msa0882690 | 0.807959 | 3.917154e-50 | -8.615850e-47 |
| Msa0682840 | Msa0882690 | 0.802039 | 6.776906e-49 | -8.615850e-47 |
| Msa0688070 | Msa0882690 | 0.800926 | 1.145740e-48 | -8.615850e-47 |
| Msa0690440 | Msa0882690 | 0.826175 | 3.132915e-54 | -8.615850e-47 |
| Msa0692950 | Msa0882690 | 0.804963 | 1.678657e-49 | -8.615850e-47 |
| Msa0693380 | Msa0882690 | 0.814302 | 1.651172e-51 | -8.615850e-47 |
| Msa0695430 | Msa0882690 | 0.802761 | 4.812022e-49 | -8.615850e-47 |
| Msa0698930 | Msa0882690 | 0.806652 | 7.412428e-50 | -8.615850e-47 |
| Msa0708860 | Msa0882690 | 0.820284 | 7.438222e-53 | -8.615850e-47 |
| Msa0723110 | Msa0882690 | 0.816664 | 4.920576e-52 | -8.615850e-47 |
| Msa0724210 | Msa0882690 | 0.815113 | 1.091942e-51 | -8.615850e-47 |
| Msa0731180 | Msa0882690 | 0.816613 | 5.052859e-52 | -8.615850e-47 |
| Msa0735170 | Msa0882690 | 0.828056 | 1.111546e-54 | -8.615850e-47 |
| Msa0739680 | Msa0882690 | 0.803080 | 4.134978e-49 | -8.615850e-47 |
| Msa0743720 | Msa0882690 | 0.809907 | 1.499873e-50 | -8.615850e-47 |
| Msa0744170 | Msa0882690 | -0.803346 | 3.642044e-49 | -8.615850e-47 |
| Msa0745790 | Msa0882690 | 0.801499 | 8.748429e-49 | -8.615850e-47 |
| Msa0766630 | Msa0882690 | 0.829925 | 3.919118e-55 | -8.615850e-47 |
| Msa0771720 | Msa0882690 | 0.805143 | 1.538658e-49 | -8.615850e-47 |
| Msa0773840 | Msa0882690 | 0.819322 | 1.234036e-52 | -8.615850e-47 |
| Msa0790510 | Msa0882690 | 0.827885 | 1.221533e-54 | -8.615850e-47 |
| Msa0794510 | Msa0882690 | -0.802915 | 4.471546e-49 | -8.615850e-47 |
| Msa0806090 | Msa0882690 | 0.805622 | 1.221608e-49 | -8.615850e-47 |
| Msa0807030 | Msa0882690 | 0.812836 | 3.469849e-51 | -8.615850e-47 |
| Msa0810220 | Msa0882690 | 0.800117 | 1.675286e-48 | -8.615850e-47 |
| Msa0813400 | Msa0882690 | 0.809340 | 1.985991e-50 | -8.615850e-47 |
| Msa0820850 | Msa0882690 | 0.830775 | 2.428981e-55 | -8.615850e-47 |
| Msa0831850 | Msa0882690 | 0.810630 | 1.047521e-50 | -8.615850e-47 |
| Msa0122590 | Msa0882690 | 0.812376 | 4.374683e-51 | -8.615850e-47 |
| Msa0131770 | Msa0882690 | 0.833958 | 3.953518e-56 | -8.615850e-47 |
| Msa0137570 | Msa0882690 | 0.804509 | 2.087469e-49 | -8.615850e-47 |
| Msa0138020 | Msa0882690 | 0.802336 | 5.886983e-49 | -8.615850e-47 |
| Msa0170140 | Msa0882690 | 0.809795 | 1.585955e-50 | -8.615850e-47 |
| Msa0178930 | Msa0882690 | 0.823552 | 1.302399e-53 | -8.615850e-47 |
| Msa0178960 | Msa0882690 | 0.803739 | 3.019447e-49 | -8.615850e-47 |
| Msa0188830 | Msa0882690 | 0.837260 | 5.772007e-57 | -8.615850e-47 |
| Msa0199800 | Msa0882690 | -0.808385 | 3.177985e-50 | -8.615850e-47 |
| Msa0201070 | Msa0882690 | 0.807014 | 6.215023e-50 | -8.615850e-47 |
| Msa0206010 | Msa0882690 | 0.802716 | 4.917159e-49 | -8.615850e-47 |
| Msa0210450 | Msa0882690 | 0.837914 | 3.922950e-57 | -8.615850e-47 |
| Msa0215320 | Msa0882690 | -0.800311 | 1.529975e-48 | -8.615850e-47 |
| Msa0216530 | Msa0882690 | 0.805666 | 1.195407e-49 | -8.615850e-47 |
| Msa0220580 | Msa0882690 | 0.804103 | 2.536895e-49 | -8.615850e-47 |
| Msa0220740 | Msa0882690 | 0.812316 | 4.507816e-51 | -8.615850e-47 |
| Msa0221060 | Msa0882690 | 0.803322 | 3.684760e-49 | -8.615850e-47 |
| Msa0223010 | Msa0882690 | 0.823059 | 1.697871e-53 | -8.615850e-47 |
| Msa0223410 | Msa0882690 | -0.805868 | 1.084169e-49 | -8.615850e-47 |
| Msa0233300 | Msa0882690 | 0.809882 | 1.518668e-50 | -8.615850e-47 |
| Msa0373930 | Msa0882690 | 0.817762 | 2.786700e-52 | -8.615850e-47 |
| Msa0376590 | Msa0882690 | 0.845869 | 3.102245e-59 | -8.615850e-47 |
| Msa0379640 | Msa0882690 | 0.832756 | 7.882526e-56 | -8.615850e-47 |
| Msa0389320 | Msa0882690 | 0.803861 | 2.847484e-49 | -8.615850e-47 |
| Msa0389810 | Msa0882690 | 0.811224 | 7.791940e-51 | -8.615850e-47 |
| Msa0397750 | Msa0882690 | 0.819943 | 8.907038e-53 | -8.615850e-47 |
| Msa0402290 | Msa0882690 | 0.808560 | 2.916673e-50 | -8.615850e-47 |
| Msa0412840 | Msa0882690 | 0.826732 | 2.308485e-54 | -8.615850e-47 |
| Msa0425790 | Msa0882690 | 0.807789 | 4.257393e-50 | -8.615850e-47 |
| Msa0426900 | Msa0882690 | 0.809138 | 2.194035e-50 | -8.615850e-47 |
| Msa0431670 | Msa0882690 | 0.801736 | 7.820779e-49 | -8.615850e-47 |
| Msa0431690 | Msa0882690 | 0.813093 | 3.047116e-51 | -8.615850e-47 |
| Msa0433410 | Msa0882690 | -0.802887 | 4.531497e-49 | -8.615850e-47 |
| Msa0442850 | Msa0882690 | 0.809694 | 1.666843e-50 | -8.615850e-47 |
| Msa0455760 | Msa0882690 | 0.806432 | 8.249306e-50 | -8.615850e-47 |
| Msa0458440 | Msa0882690 | 0.813501 | 2.479851e-51 | -8.615850e-47 |
| Msa0466390 | Msa0882690 | 0.811165 | 8.022630e-51 | -8.615850e-47 |
| Msa0468130 | Msa0882690 | 0.805130 | 1.548356e-49 | -8.615850e-47 |
| Msa0469940 | Msa0882690 | -0.802313 | 5.953064e-49 | -8.615850e-47 |
| Msa0471900 | Msa0882690 | 0.801747 | 7.780100e-49 | -8.615850e-47 |
| Msa0479340 | Msa0882690 | 0.801315 | 9.542067e-49 | -8.615850e-47 |
| Msa0479970 | Msa0882690 | 0.814061 | 1.866184e-51 | -8.615850e-47 |
| Msa0243710 | Msa0882690 | 0.809555 | 1.785855e-50 | -8.615850e-47 |
| Msa0245940 | Msa0882690 | 0.807837 | 4.158623e-50 | -8.615850e-47 |
| Msa0258760 | Msa0882690 | 0.818039 | 2.413394e-52 | -8.615850e-47 |
| Msa0262510 | Msa0882690 | 0.807520 | 4.856124e-50 | -8.615850e-47 |
| Msa0269450 | Msa0882690 | 0.816531 | 5.270857e-52 | -8.615850e-47 |
| Msa0269810 | Msa0882690 | 0.800288 | 1.546394e-48 | -8.615850e-47 |
| Msa0270100 | Msa0882690 | 0.804306 | 2.301017e-49 | -8.615850e-47 |
| Msa0284520 | Msa0882690 | 0.811982 | 5.330085e-51 | -8.615850e-47 |
| Msa0287410 | Msa0882690 | 0.810112 | 1.355256e-50 | -8.615850e-47 |
| Msa0294950 | Msa0882690 | 0.804682 | 1.920996e-49 | -8.615850e-47 |
| Msa0305190 | Msa0882690 | 0.831151 | 1.964039e-55 | -8.615850e-47 |
| Msa0306210 | Msa0882690 | -0.813375 | 2.642266e-51 | -8.615850e-47 |
| Msa0315290 | Msa0882690 | 0.822381 | 2.442127e-53 | -8.615850e-47 |
| Msa0319170 | Msa0882690 | 0.828473 | 8.818045e-55 | -8.615850e-47 |
| Msa0326110 | Msa0882690 | 0.815141 | 1.076322e-51 | -8.615850e-47 |
| Msa0338110 | Msa0882690 | 0.831379 | 1.726030e-55 | -8.615850e-47 |
| Msa0339620 | Msa0882690 | 0.837463 | 5.122320e-57 | -8.615850e-47 |
| Msa0340450 | Msa0882690 | 0.810633 | 1.046182e-50 | -8.615850e-47 |
| Msa0344690 | Msa0882690 | -0.806663 | 7.373621e-50 | -8.615850e-47 |
| Msa0344830 | Msa0882690 | 0.829722 | 4.390512e-55 | -8.615850e-47 |
| Msa0344910 | Msa0882690 | 0.806170 | 9.369255e-50 | -8.615850e-47 |
| Msa0344980 | Msa0882690 | 0.802146 | 6.441630e-49 | -8.615850e-47 |
| Msa0363790 | Msa0882690 | 0.802973 | 4.350031e-49 | -8.615850e-47 |
| Msa0484780 | Msa0882690 | 0.823677 | 1.217910e-53 | -8.615850e-47 |
| Msa0493000 | Msa0882690 | 0.805704 | 1.173972e-49 | -8.615850e-47 |
| Msa0493630 | Msa0882690 | 0.801465 | 8.891109e-49 | -8.615850e-47 |
| Msa0502880 | Msa0882690 | 0.800943 | 1.136679e-48 | -8.615850e-47 |
| Msa0512750 | Msa0882690 | 0.843787 | 1.129939e-58 | -8.615850e-47 |
| Msa0512900 | Msa0882690 | 0.809647 | 1.705966e-50 | -8.615850e-47 |
| Msa0516370 | Msa0882690 | 0.837457 | 5.140028e-57 | -8.615850e-47 |
| Msa0518380 | Msa0882690 | 0.817762 | 2.786700e-52 | -8.615850e-47 |
| Msa0523940 | Msa0882690 | 0.800854 | 1.185619e-48 | -8.615850e-47 |
| Msa0529040 | Msa0882690 | 0.816068 | 6.689699e-52 | -8.615850e-47 |
| Msa0532350 | Msa0882690 | 0.811240 | 7.728281e-51 | -8.615850e-47 |
| Msa0536220 | Msa0882690 | 0.805156 | 1.529305e-49 | -8.615850e-47 |
| Msa0553460 | Msa0882690 | 0.837730 | 4.375540e-57 | -8.615850e-47 |
| Msa0555720 | Msa0882690 | 0.818408 | 1.991448e-52 | -8.615850e-47 |
| Msa0558690 | Msa0882690 | 0.803969 | 2.704197e-49 | -8.615850e-47 |
| Msa0562440 | Msa0882690 | 0.825458 | 4.635639e-54 | -8.615850e-47 |
| Msa0572480 | Msa0882690 | 0.806636 | 7.470043e-50 | -8.615850e-47 |
| Msa0575700 | Msa0882690 | 0.819329 | 1.230082e-52 | -8.615850e-47 |
| Msa0578860 | Msa0882690 | 0.802613 | 5.162531e-49 | -8.615850e-47 |
| Msa0585230 | Msa0882690 | 0.828003 | 1.144414e-54 | -8.615850e-47 |
| Msa0599890 | Msa0882690 | 0.809554 | 1.786902e-50 | -8.615850e-47 |
| Msa0842650 | Msa0882690 | 0.818132 | 2.299450e-52 | -8.615850e-47 |
| Msa0844900 | Msa0882690 | 0.811724 | 6.068232e-51 | -8.615850e-47 |
| Msa0845000 | Msa0882690 | 0.815219 | 1.033929e-51 | -8.615850e-47 |
| Msa0849030 | Msa0882690 | 0.817127 | 3.874065e-52 | -8.615850e-47 |
| Msa0861130 | Msa0882690 | 0.835932 | 1.257981e-56 | -8.615850e-47 |
| Msa0862110 | Msa0882690 | 0.801923 | 7.158638e-49 | -8.615850e-47 |
| Msa0876580 | Msa0882690 | 0.812819 | 3.499320e-51 | -8.615850e-47 |
| Msa0876850 | Msa0882690 | -0.800389 | 1.474415e-48 | -8.615850e-47 |
| Msa0882690 | Msa0886330 | -0.800126 | 1.668116e-48 | -8.615850e-47 |
| Msa0882690 | Msa0907070 | 0.807725 | 4.392080e-50 | -8.615850e-47 |
| Msa0882690 | Msa0910000 | 0.839609 | 1.430257e-57 | -8.615850e-47 |
| Msa0882690 | Msa0913480 | -0.800799 | 1.216388e-48 | -8.615850e-47 |
| Msa0882690 | Msa0924310 | 0.825791 | 3.865121e-54 | -8.615850e-47 |
| Msa0882690 | Msa0925290 | 0.808291 | 3.329414e-50 | -8.615850e-47 |
| Msa0882690 | Msa0925870 | 0.802147 | 6.438541e-49 | -8.615850e-47 |
| Msa0882690 | Msa0927380 | 0.820475 | 6.727556e-53 | -8.615850e-47 |
| Msa0882690 | Msa0932830 | 0.807374 | 5.216179e-50 | -8.615850e-47 |
| Msa0882690 | Msa0933100 | 0.805053 | 1.607300e-49 | -8.615850e-47 |
| Msa0882690 | Msa0942080 | -0.803834 | 2.885697e-49 | -8.615850e-47 |
| Msa0882690 | Msa0947660 | 0.816418 | 5.587153e-52 | -8.615850e-47 |
| Msa0882690 | Msa0947760 | 0.825176 | 5.405523e-54 | -8.615850e-47 |
| Msa0882690 | Msa0951450 | 0.804818 | 1.799247e-49 | -8.615850e-47 |
| Msa0882690 | Msa0969450 | 0.804819 | 1.799009e-49 | -8.615850e-47 |
| Msa0882690 | Msa0969520 | 0.845484 | 3.945489e-59 | -8.615850e-47 |
| Msa0882690 | Msa0973600 | 0.812725 | 3.669756e-51 | -8.615850e-47 |
| Msa0882690 | Msa0976670 | 0.814892 | 1.221971e-51 | -8.615850e-47 |
| Msa0882690 | Msa0982270 | 0.820212 | 7.728345e-53 | -8.615850e-47 |
| Msa0882690 | Msa0992490 | -0.812610 | 3.887200e-51 | -8.615850e-47 |
| Msa0882690 | Msa0993290 | 0.812329 | 4.479082e-51 | -8.615850e-47 |
| Msa0882690 | Msa0993600 | 0.810013 | 1.423319e-50 | -8.615850e-47 |
| Msa0882690 | Msa0998690 | 0.806465 | 8.118987e-50 | -8.615850e-47 |
| Msa0882690 | Msa0999100 | 0.802019 | 6.843898e-49 | -8.615850e-47 |
| Msa0882690 | Msa1003620 | 0.816617 | 5.042788e-52 | -8.615850e-47 |
| Msa0882690 | Msa1006850 | 0.815710 | 8.041945e-52 | -8.615850e-47 |
| Msa0882690 | Msa1012830 | 0.802786 | 4.755425e-49 | -8.615850e-47 |
| Msa0882690 | Msa1014540 | 0.827554 | 1.467235e-54 | -8.615850e-47 |
| Msa0882690 | Msa1014990 | 0.804976 | 1.667639e-49 | -8.615850e-47 |
| Msa0882690 | Msa1015790 | 0.801065 | 1.073506e-48 | -8.615850e-47 |
| Msa0882690 | Msa1039880 | 0.809630 | 1.720748e-50 | -8.615850e-47 |
| Msa0882690 | Msa1054990 | 0.813119 | 3.007978e-51 | -8.615850e-47 |
| Msa0882690 | Msa1059570 | 0.816978 | 4.184352e-52 | -8.615850e-47 |
| Msa0882690 | Msa1061680 | 0.811120 | 8.204453e-51 | -8.615850e-47 |
| Msa0882690 | Msa1068200 | -0.813458 | 2.533946e-51 | -8.615850e-47 |
| Msa0882690 | Msa1071110 | 0.808210 | 3.464189e-50 | -8.615850e-47 |
| Msa0882690 | Msa1075080 | -0.811132 | 8.158837e-51 | -8.615850e-47 |
| Msa0882690 | Msa1075220 | -0.843745 | 1.159775e-58 | -8.615850e-47 |
| Msa0882690 | Msa1075650 | 0.808172 | 3.528481e-50 | -8.615850e-47 |
| Msa0882690 | Msa1082500 | 0.835277 | 1.842970e-56 | -8.615850e-47 |
| Msa0882690 | Msa1082580 | 0.808855 | 2.522181e-50 | -8.615850e-47 |
| Msa0882690 | Msa1084260 | 0.825014 | 5.904348e-54 | -8.615850e-47 |
| Msa0882690 | Msa1085740 | 0.803347 | 3.640667e-49 | -8.615850e-47 |
| Msa0882690 | Msa1090260 | 0.840282 | 9.553493e-58 | -8.615850e-47 |
| Msa0882690 | Msa1109680 | 0.806128 | 9.562736e-50 | -8.615850e-47 |
| Msa0882690 | Msa1115020 | 0.807402 | 5.144719e-50 | -8.615850e-47 |
| Msa0882690 | Msa1116130 | -0.823349 | 1.453229e-53 | -8.615850e-47 |
| Msa0882690 | Msa1116260 | 0.807497 | 4.911886e-50 | -8.615850e-47 |
| Msa0882690 | Msa1121490 | 0.803465 | 3.441728e-49 | -8.615850e-47 |
| Msa0882690 | Msa1131940 | -0.801836 | 7.459927e-49 | -8.615850e-47 |
| Msa0882690 | Msa1132970 | 0.803696 | 3.082610e-49 | -8.615850e-47 |
| Msa0882690 | Msa1137570 | 0.812477 | 4.156905e-51 | -8.615850e-47 |
| Msa0882690 | Msa1139000 | -0.820034 | 8.486722e-53 | -8.615850e-47 |
| Msa0882690 | Msa1143930 | -0.800304 | 1.534544e-48 | -8.615850e-47 |
| Msa0882690 | Msa1154280 | 0.802621 | 5.143926e-49 | -8.615850e-47 |
| Msa0882690 | Msa1156020 | 0.803698 | 3.079353e-49 | -8.615850e-47 |
| Msa0882690 | Msa1156340 | -0.806210 | 9.187820e-50 | -8.615850e-47 |
| Msa0882690 | Msa1162550 | -0.837384 | 5.364918e-57 | -8.615850e-47 |
| Msa0882690 | Msa1174040 | 0.803032 | 4.230497e-49 | -8.615850e-47 |
| Msa0882690 | Msa1186950 | -0.823560 | 1.297011e-53 | -8.615850e-47 |
| Msa0882690 | Msa1195190 | 0.800256 | 1.569211e-48 | -8.615850e-47 |
| Msa0882690 | Msa1217430 | -0.801425 | 9.058127e-49 | -8.615850e-47 |
| Msa0882690 | Msa1224480 | 0.803270 | 3.775939e-49 | -8.615850e-47 |
| Msa0882690 | Msa1228590 | 0.807696 | 4.456332e-50 | -8.615850e-47 |
| Msa0882690 | Msa1233500 | 0.804858 | 1.765419e-49 | -8.615850e-47 |
| Msa0882690 | Msa1233890 | 0.828138 | 1.061909e-54 | -8.615850e-47 |
| Msa0882690 | Msa1237980 | 0.812896 | 3.366418e-51 | -8.615850e-47 |
| Msa0882690 | Msa1247250 | 0.812269 | 4.615683e-51 | -8.615850e-47 |
| Msa0882690 | Msa1249490 | 0.819334 | 1.226598e-52 | -8.615850e-47 |
| Msa0882690 | Msa1250890 | 0.801821 | 7.512525e-49 | -8.615850e-47 |
| Msa0882690 | Msa1253020 | 0.810733 | 9.955381e-51 | -8.615850e-47 |
| Msa0882690 | Msa1269940 | 0.814439 | 1.540080e-51 | -8.615850e-47 |
| Msa0882690 | Msa1276440 | 0.848727 | 5.096386e-60 | -8.615850e-47 |
| Msa0882690 | Msa1277660 | 0.813151 | 2.959979e-51 | -8.615850e-47 |
| Msa0882690 | Msa1279210 | 0.831769 | 1.383751e-55 | -8.615850e-47 |
| Msa0882690 | Msa1282580 | -0.826291 | 2.940671e-54 | -8.615850e-47 |
| Msa0882690 | Msa1284680 | 0.821620 | 3.665617e-53 | -8.615850e-47 |
| Msa0882690 | Msa1291660 | 0.801678 | 8.039941e-49 | -8.615850e-47 |
| Msa0882690 | Msa1292400 | 0.800925 | 1.146341e-48 | -8.615850e-47 |
| Msa0882690 | Msa1305340 | 0.804202 | 2.418878e-49 | -8.615850e-47 |
| Msa0882690 | Msa1306750 | 0.803710 | 3.062057e-49 | -8.615850e-47 |
| Msa0882690 | Msa1307740 | 0.804439 | 2.158878e-49 | -8.615850e-47 |
| Msa0882690 | Msa1313140 | 0.802175 | 6.355025e-49 | -8.615850e-47 |
| Msa0882690 | Msa1314340 | 0.810441 | 1.150900e-50 | -8.615850e-47 |
| Msa0882690 | Msa1318990 | 0.806507 | 7.953932e-50 | -8.615850e-47 |
| Msa0882690 | Msa1329700 | 0.811423 | 7.054783e-51 | -8.615850e-47 |
| Msa0882690 | Msa1343760 | 0.830873 | 2.298552e-55 | -8.615850e-47 |
| Msa0882690 | Msa1353470 | 0.820638 | 6.169902e-53 | -8.615850e-47 |
| Msa0882690 | Msa1357530 | 0.801992 | 6.929627e-49 | -8.615850e-47 |
| Msa0882690 | Msa1359040 | 0.847369 | 1.207820e-59 | -8.615850e-47 |
| Msa0882690 | Msa1362880 | 0.806456 | 8.155463e-50 | -8.615850e-47 |
| Msa0882690 | Msa1369530 | 0.804244 | 2.370342e-49 | -8.615850e-47 |
| Msa0882690 | Msa1372760 | 0.810406 | 1.170956e-50 | -8.615850e-47 |
| Msa0882690 | Msa1384330 | 0.807090 | 5.989123e-50 | -8.615850e-47 |
| Msa0882690 | Msa1384350 | 0.802650 | 5.072091e-49 | -8.615850e-47 |
| Msa0882690 | Msa1390050 | 0.810924 | 9.050043e-51 | -8.615850e-47 |
| Msa0882690 | Msa1392260 | 0.845279 | 4.483462e-59 | -8.615850e-47 |
| Msa0882690 | Msa1403340 | 0.807113 | 5.923379e-50 | -8.615850e-47 |
| Msa0882690 | Msa1407600 | 0.804504 | 2.092707e-49 | -8.615850e-47 |
| Msa0882690 | Msa1411020 | 0.806612 | 7.560693e-50 | -8.615850e-47 |
| Msa0882690 | Msa1419960 | 0.822699 | 2.059896e-53 | -8.615850e-47 |
| Msa0882690 | Msa1420290 | 0.811366 | 7.258235e-51 | -8.615850e-47 |
| Msa0882690 | Msa1420820 | 0.800677 | 1.288248e-48 | -8.615850e-47 |
| Msa0882690 | Msa1424290 | 0.801991 | 6.933801e-49 | -8.615850e-47 |
| Msa0882690 | Msa1427230 | 0.853342 | 2.546118e-61 | -8.615850e-47 |
| Msa0882690 | Msa1429900 | 0.830139 | 3.474422e-55 | -8.615850e-47 |
| Msa0882690 | Msa1430680 | 0.817404 | 3.355633e-52 | -8.615850e-47 |
| Msa0882690 | Msa1434350 | 0.806386 | 8.434831e-50 | -8.615850e-47 |
| Msa0882690 | Msa1439320 | 0.808561 | 2.915246e-50 | -8.615850e-47 |
| Msa0882690 | Msa1444740 | 0.813278 | 2.775623e-51 | -8.615850e-47 |
| Msa0882690 | Msa1451620 | -0.839467 | 1.557389e-57 | -8.615850e-47 |
| Msa0882690 | Msa1453560 | 0.805462 | 1.319217e-49 | -8.615850e-47 |
| Msa0882690 | Msa1460830 | 0.848129 | 7.459702e-60 | -8.615850e-47 |
| Msa0882690 | Msa1464940 | 0.810185 | 1.307227e-50 | -8.615850e-47 |
| Msa0882690 | Msa1466540 | 0.823521 | 1.324900e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0882690 | MtrunA17_Chr6g0462391 | 68.493 | 73 | 9 | 3 | 1 | 65 | 1 | 67 | 1.38e-21 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 22 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCAAGCAGTTTCTGTTGT+TGG | 0.278640 | 6_1:+32083313 | None:intergenic |
| GTTGACACCACTTCTCAAAA+TGG | 0.343287 | 6_1:-32083249 | Msa0882690:CDS |
| CTGAGAGAGAGATGCATCTA+TGG | 0.350559 | 6_1:-32083416 | Msa0882690:exon |
| GAATCTCTCAGATTCTTTGT+TGG | 0.383111 | 6_1:+32083393 | None:intergenic |
| GGGCGGGTTTCGAACCTCTC+TGG | 0.403718 | 6_1:+32083667 | None:intergenic |
| TAACAGAAGGTCATGACATA+TGG | 0.445027 | 6_1:+32083215 | None:intergenic |
| AGAGCCTTGTTTGAGAGGTA+AGG | 0.487732 | 6_1:+32081940 | None:intergenic |
| TCTTAACCAAGTGACTTCTC+TGG | 0.505723 | 6_1:+32083729 | None:intergenic |
| ACCTCTCAAACAAGGCTCTA+GGG | 0.512728 | 6_1:-32081936 | Msa0882690:CDS |
| CTCTTCAACATCGAGAAACT+CGG | 0.527562 | 6_1:-32083700 | Msa0882690:five_prime_UTR |
| TACCTCTCAAACAAGGCTCT+AGG | 0.528088 | 6_1:-32081937 | Msa0882690:CDS |
| ACCCTAGAGCCTTGTTTGAG+AGG | 0.529926 | 6_1:+32081935 | None:intergenic |
| CAAGTGACTTCTCTGGAGAC+AGG | 0.568804 | 6_1:+32083736 | None:intergenic |
| ACTTCTCTGGAGACAGGCGG+AGG | 0.583410 | 6_1:+32083742 | None:intergenic |
| TACTGTTGTTTCTGCTGTGG+CGG | 0.585711 | 6_1:-32083177 | Msa0882690:intron |
| TGTTACTGTTGTTTCTGCTG+TGG | 0.590386 | 6_1:-32083180 | Msa0882690:CDS |
| CTGTCTCCAGAGAAGTCACT+TGG | 0.601011 | 6_1:-32083735 | Msa0882690:five_prime_UTR |
| AGCAAGAGAGAAGTAACAGA+AGG | 0.609065 | 6_1:+32083202 | None:intergenic |
| AGAACCTTACCTCTCAAACA+AGG | 0.656416 | 6_1:-32081944 | Msa0882690:CDS |
| GTGACTTCTCTGGAGACAGG+CGG | 0.676940 | 6_1:+32083739 | None:intergenic |
| AATCTCTGTAACAACTCACA+AGG | 0.697849 | 6_1:+32083769 | None:intergenic |
| TCGGTTAGCGACAACCAGAG+AGG | 0.741646 | 6_1:-32083681 | Msa0882690:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAGAAGTAAAAAAA+AGG | + | chr6_1:32082579-32082598 | None:intergenic | 10.0% |
| !!! | TTTTGAAAATTATGAAAATT+TGG | - | chr6_1:32083065-32083084 | Msa0882690:intron | 10.0% |
| !!! | TGAATTTTGATAATTTAATT+TGG | - | chr6_1:32083321-32083340 | Msa0882690:CDS | 10.0% |
| !! | TAAAAAAAGAAGTAAAAAAA+AGG | + | chr6_1:32082579-32082598 | None:intergenic | 10.0% |
| !!! | TTTTGAAAATTATGAAAATT+TGG | - | chr6_1:32083065-32083084 | Msa0882690:intron | 10.0% |
| !!! | TGAATTTTGATAATTTAATT+TGG | - | chr6_1:32083321-32083340 | Msa0882690:CDS | 10.0% |
| !! | TCATAATGATTATATATAGA+GGG | + | chr6_1:32082071-32082090 | None:intergenic | 15.0% |
| !! | TTGAATAAAACTATATTATG+TGG | - | chr6_1:32082870-32082889 | Msa0882690:intron | 15.0% |
| !! | AAAACATTCAATTATGTATA+TGG | - | chr6_1:32083027-32083046 | Msa0882690:intron | 15.0% |
| !!! | TGAAATTGATAATGAAATAA+TGG | - | chr6_1:32083512-32083531 | Msa0882690:intron | 15.0% |
| !! | AACTGAAATATAAATAATTG+AGG | + | chr6_1:32083638-32083657 | None:intergenic | 15.0% |
| !! | TCATAATGATTATATATAGA+GGG | + | chr6_1:32082071-32082090 | None:intergenic | 15.0% |
| !! | TTGAATAAAACTATATTATG+TGG | - | chr6_1:32082870-32082889 | Msa0882690:intron | 15.0% |
| !! | AAAACATTCAATTATGTATA+TGG | - | chr6_1:32083027-32083046 | Msa0882690:intron | 15.0% |
| !!! | TGAAATTGATAATGAAATAA+TGG | - | chr6_1:32083512-32083531 | Msa0882690:intron | 15.0% |
| !! | AACTGAAATATAAATAATTG+AGG | + | chr6_1:32083638-32083657 | None:intergenic | 15.0% |
| !! | ATAATGATTATATATAGAGG+GGG | + | chr6_1:32082069-32082088 | None:intergenic | 20.0% |
| !! | CATAATGATTATATATAGAG+GGG | + | chr6_1:32082070-32082089 | None:intergenic | 20.0% |
| !! | CTCATAATGATTATATATAG+AGG | + | chr6_1:32082072-32082091 | None:intergenic | 20.0% |
| !! | ATATTTGACTATTATCTCTT+TGG | + | chr6_1:32082148-32082167 | None:intergenic | 20.0% |
| !! | TAAATATACCTAAAGTACAA+AGG | + | chr6_1:32082252-32082271 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAAACAACATTTT+AGG | - | chr6_1:32082698-32082717 | Msa0882690:intron | 20.0% |
| !!! | TTTTCATAATTTTCAAAACG+TGG | + | chr6_1:32083063-32083082 | None:intergenic | 20.0% |
| !!! | TTAATTTAGTTGATTTTGGA+TGG | + | chr6_1:32083140-32083159 | None:intergenic | 20.0% |
| !!! | ATGGTTAATTTAGTTGATTT+TGG | + | chr6_1:32083144-32083163 | None:intergenic | 20.0% |
| !! | TAGTGTAATAGTGTTTATTA+GGG | - | chr6_1:32083292-32083311 | Msa0882690:CDS | 20.0% |
| !! | ATGATTATGATTAATCAAAC+TGG | - | chr6_1:32083384-32083403 | Msa0882690:CDS | 20.0% |
| !! | ATAATGATTATATATAGAGG+GGG | + | chr6_1:32082069-32082088 | None:intergenic | 20.0% |
| !! | CATAATGATTATATATAGAG+GGG | + | chr6_1:32082070-32082089 | None:intergenic | 20.0% |
| !! | CTCATAATGATTATATATAG+AGG | + | chr6_1:32082072-32082091 | None:intergenic | 20.0% |
| !! | ATATTTGACTATTATCTCTT+TGG | + | chr6_1:32082148-32082167 | None:intergenic | 20.0% |
| !! | TAAATATACCTAAAGTACAA+AGG | + | chr6_1:32082252-32082271 | None:intergenic | 20.0% |
| !!! | TAAGCAAAAAACAACATTTT+AGG | - | chr6_1:32082698-32082717 | Msa0882690:intron | 20.0% |
| !!! | TTTTCATAATTTTCAAAACG+TGG | + | chr6_1:32083063-32083082 | None:intergenic | 20.0% |
| !!! | TTAATTTAGTTGATTTTGGA+TGG | + | chr6_1:32083140-32083159 | None:intergenic | 20.0% |
| !!! | ATGGTTAATTTAGTTGATTT+TGG | + | chr6_1:32083144-32083163 | None:intergenic | 20.0% |
| !! | TAGTGTAATAGTGTTTATTA+GGG | - | chr6_1:32083292-32083311 | Msa0882690:CDS | 20.0% |
| !! | ATGATTATGATTAATCAAAC+TGG | - | chr6_1:32083384-32083403 | Msa0882690:CDS | 20.0% |
| !!! | CTTGATCAGTTTTAATAATC+TGG | - | chr6_1:32082666-32082685 | Msa0882690:intron | 25.0% |
| !!! | AAAACAACATTTTAGGTATC+CGG | - | chr6_1:32082705-32082724 | Msa0882690:intron | 25.0% |
| ! | ATCAATCTTATAAATGTGAC+CGG | + | chr6_1:32082727-32082746 | None:intergenic | 25.0% |
| ! | TAAGCAAAAAACAACTTCTT+AGG | + | chr6_1:32082769-32082788 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr6_1:32082779-32082798 | Msa0882690:intron | 25.0% |
| ! | CAACCTAACAATAACAATAT+CGG | + | chr6_1:32082945-32082964 | None:intergenic | 25.0% |
| ! | GTAGTGTAATAGTGTTTATT+AGG | - | chr6_1:32083291-32083310 | Msa0882690:CDS | 25.0% |
| !!! | TTAATTTGGTGAAGATGTTT+TGG | - | chr6_1:32083335-32083354 | Msa0882690:CDS | 25.0% |
| !!! | TTGGTTTTGATTTTTTGTCT+TGG | - | chr6_1:32083354-32083373 | Msa0882690:CDS | 25.0% |
| ! | GAAATAATGGTTTCAAATTG+CGG | - | chr6_1:32083525-32083544 | Msa0882690:intron | 25.0% |
| ! | TTATATTTCAGTTGCAATTG+CGG | - | chr6_1:32083645-32083664 | Msa0882690:intron | 25.0% |
| !!! | CTTGATCAGTTTTAATAATC+TGG | - | chr6_1:32082666-32082685 | Msa0882690:intron | 25.0% |
| !!! | AAAACAACATTTTAGGTATC+CGG | - | chr6_1:32082705-32082724 | Msa0882690:intron | 25.0% |
| ! | ATCAATCTTATAAATGTGAC+CGG | + | chr6_1:32082727-32082746 | None:intergenic | 25.0% |
| ! | TAAGCAAAAAACAACTTCTT+AGG | + | chr6_1:32082769-32082788 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | - | chr6_1:32082779-32082798 | Msa0882690:intron | 25.0% |
| ! | CAACCTAACAATAACAATAT+CGG | + | chr6_1:32082945-32082964 | None:intergenic | 25.0% |
| ! | GTAGTGTAATAGTGTTTATT+AGG | - | chr6_1:32083291-32083310 | Msa0882690:CDS | 25.0% |
| !!! | TTAATTTGGTGAAGATGTTT+TGG | - | chr6_1:32083335-32083354 | Msa0882690:CDS | 25.0% |
| !!! | TTGGTTTTGATTTTTTGTCT+TGG | - | chr6_1:32083354-32083373 | Msa0882690:CDS | 25.0% |
| ! | GAAATAATGGTTTCAAATTG+CGG | - | chr6_1:32083525-32083544 | Msa0882690:intron | 25.0% |
| ! | TTATATTTCAGTTGCAATTG+CGG | - | chr6_1:32083645-32083664 | Msa0882690:intron | 25.0% |
| ! | GAGCTAAGCAACATTTTTAT+TGG | - | chr6_1:32082089-32082108 | Msa0882690:intron | 30.0% |
| TCTTTGGTCATTAGACAAAA+AGG | + | chr6_1:32082132-32082151 | None:intergenic | 30.0% | |
| ATTCAGAACCTTTGTACTTT+AGG | - | chr6_1:32082241-32082260 | Msa0882690:intron | 30.0% | |
| ATCATCATACCTGAAAAAAC+TGG | - | chr6_1:32082349-32082368 | Msa0882690:intron | 30.0% | |
| !!! | TATTCCATTCCAGTTTTTTC+AGG | + | chr6_1:32082361-32082380 | None:intergenic | 30.0% |
| AACAATATCGGCATTCTTTA+GGG | + | chr6_1:32082933-32082952 | None:intergenic | 30.0% | |
| TAACAATATCGGCATTCTTT+AGG | + | chr6_1:32082934-32082953 | None:intergenic | 30.0% | |
| ! | ATGCCGATATTGTTATTGTT+AGG | - | chr6_1:32082939-32082958 | Msa0882690:intron | 30.0% |
| ! | CGATATTGTTATTGTTAGGT+TGG | - | chr6_1:32082943-32082962 | Msa0882690:intron | 30.0% |
| ! | TAGTTGTGTGTGTTAGTTTA+AGG | - | chr6_1:32082987-32083006 | Msa0882690:intron | 30.0% |
| TCAATTCACACTCAAAATTG+TGG | + | chr6_1:32083112-32083131 | None:intergenic | 30.0% | |
| GTTAATCACGTTCAAAAAGA+TGG | + | chr6_1:32083163-32083182 | None:intergenic | 30.0% | |
| TCGCAAATGTAAGGAAAAAT+GGG | - | chr6_1:32083189-32083208 | Msa0882690:CDS | 30.0% | |
| AATAGTGTTTATTAGGGAAG+TGG | - | chr6_1:32083298-32083317 | Msa0882690:CDS | 30.0% | |
| AACTGGTATTTATAGAAGAG+AGG | - | chr6_1:32083401-32083420 | Msa0882690:CDS | 30.0% | |
| CTGAATTGACCATTTATTGT+GGG | - | chr6_1:32083449-32083468 | Msa0882690:five_prime_UTR | 30.0% | |
| TGAATTGACCATTTATTGTG+GGG | - | chr6_1:32083450-32083469 | Msa0882690:five_prime_UTR | 30.0% | |
| AGATATATCCCCACAATAAA+TGG | + | chr6_1:32083461-32083480 | None:intergenic | 30.0% | |
| ! | TGTGGGGATATATCTATTTT+TGG | - | chr6_1:32083466-32083485 | Msa0882690:intron | 30.0% |
| !!! | GGATATATCTATTTTTGGTG+AGG | - | chr6_1:32083471-32083490 | Msa0882690:intron | 30.0% |
| AATTGAAATTTCGACTACAC+AGG | + | chr6_1:32083598-32083617 | None:intergenic | 30.0% | |
| TAGTCGAAATTTCAATTGTG+AGG | - | chr6_1:32083601-32083620 | Msa0882690:intron | 30.0% | |
| !! | AGATACTATCGATTTCCTTA+TGG | + | chr6_1:32083734-32083753 | None:intergenic | 30.0% |
| ! | GAGCTAAGCAACATTTTTAT+TGG | - | chr6_1:32082089-32082108 | Msa0882690:intron | 30.0% |
| TCTTTGGTCATTAGACAAAA+AGG | + | chr6_1:32082132-32082151 | None:intergenic | 30.0% | |
| ATTCAGAACCTTTGTACTTT+AGG | - | chr6_1:32082241-32082260 | Msa0882690:intron | 30.0% | |
| ATCATCATACCTGAAAAAAC+TGG | - | chr6_1:32082349-32082368 | Msa0882690:intron | 30.0% | |
| !!! | TATTCCATTCCAGTTTTTTC+AGG | + | chr6_1:32082361-32082380 | None:intergenic | 30.0% |
| AACAATATCGGCATTCTTTA+GGG | + | chr6_1:32082933-32082952 | None:intergenic | 30.0% | |
| TAACAATATCGGCATTCTTT+AGG | + | chr6_1:32082934-32082953 | None:intergenic | 30.0% | |
| ! | ATGCCGATATTGTTATTGTT+AGG | - | chr6_1:32082939-32082958 | Msa0882690:intron | 30.0% |
| ! | CGATATTGTTATTGTTAGGT+TGG | - | chr6_1:32082943-32082962 | Msa0882690:intron | 30.0% |
| ! | TAGTTGTGTGTGTTAGTTTA+AGG | - | chr6_1:32082987-32083006 | Msa0882690:intron | 30.0% |
| TCAATTCACACTCAAAATTG+TGG | + | chr6_1:32083112-32083131 | None:intergenic | 30.0% | |
| GTTAATCACGTTCAAAAAGA+TGG | + | chr6_1:32083163-32083182 | None:intergenic | 30.0% | |
| TCGCAAATGTAAGGAAAAAT+GGG | - | chr6_1:32083189-32083208 | Msa0882690:CDS | 30.0% | |
| AATAGTGTTTATTAGGGAAG+TGG | - | chr6_1:32083298-32083317 | Msa0882690:CDS | 30.0% | |
| AACTGGTATTTATAGAAGAG+AGG | - | chr6_1:32083401-32083420 | Msa0882690:CDS | 30.0% | |
| CTGAATTGACCATTTATTGT+GGG | - | chr6_1:32083449-32083468 | Msa0882690:five_prime_UTR | 30.0% | |
| TGAATTGACCATTTATTGTG+GGG | - | chr6_1:32083450-32083469 | Msa0882690:five_prime_UTR | 30.0% | |
| AGATATATCCCCACAATAAA+TGG | + | chr6_1:32083461-32083480 | None:intergenic | 30.0% | |
| ! | TGTGGGGATATATCTATTTT+TGG | - | chr6_1:32083466-32083485 | Msa0882690:intron | 30.0% |
| !!! | GGATATATCTATTTTTGGTG+AGG | - | chr6_1:32083471-32083490 | Msa0882690:intron | 30.0% |
| AATTGAAATTTCGACTACAC+AGG | + | chr6_1:32083598-32083617 | None:intergenic | 30.0% | |
| TAGTCGAAATTTCAATTGTG+AGG | - | chr6_1:32083601-32083620 | Msa0882690:intron | 30.0% | |
| !! | AGATACTATCGATTTCCTTA+TGG | + | chr6_1:32083734-32083753 | None:intergenic | 30.0% |
| AATCTCTGTAACAACTCACA+AGG | + | chr6_1:32081947-32081966 | None:intergenic | 35.0% | |
| ATGATTATATATAGAGGGGG+CGG | + | chr6_1:32082066-32082085 | None:intergenic | 35.0% | |
| GAATCTCTCAGATTCTTTGT+TGG | + | chr6_1:32082323-32082342 | None:intergenic | 35.0% | |
| CATACCTGAAAAAACTGGAA+TGG | - | chr6_1:32082354-32082373 | Msa0882690:intron | 35.0% | |
| !! | TACAGTTCCATTTTGAGAAG+TGG | + | chr6_1:32082474-32082493 | None:intergenic | 35.0% |
| TAACAGAAGGTCATGACATA+TGG | + | chr6_1:32082501-32082520 | None:intergenic | 35.0% | |
| AAATTGTTTCATACTCCCTC+CGG | + | chr6_1:32082801-32082820 | None:intergenic | 35.0% | |
| !!! | TTAGGTTGGACATTTTCAGT+GGG | - | chr6_1:32082957-32082976 | Msa0882690:intron | 35.0% |
| ! | CTTTTTGAACGTGATTAACC+AGG | - | chr6_1:32083164-32083183 | Msa0882690:intron | 35.0% |
| GTCGCAAATGTAAGGAAAAA+TGG | - | chr6_1:32083188-32083207 | Msa0882690:CDS | 35.0% | |
| GCTGAATTGACCATTTATTG+TGG | - | chr6_1:32083448-32083467 | Msa0882690:five_prime_UTR | 35.0% | |
| GAACAACTATACCAGAAACT+TGG | + | chr6_1:32083708-32083727 | None:intergenic | 35.0% | |
| GTATAGTTGTTCTTGCCATA+AGG | - | chr6_1:32083716-32083735 | Msa0882690:five_prime_UTR | 35.0% | |
| AATCTCTGTAACAACTCACA+AGG | + | chr6_1:32081947-32081966 | None:intergenic | 35.0% | |
| ATGATTATATATAGAGGGGG+CGG | + | chr6_1:32082066-32082085 | None:intergenic | 35.0% | |
| GAATCTCTCAGATTCTTTGT+TGG | + | chr6_1:32082323-32082342 | None:intergenic | 35.0% | |
| CATACCTGAAAAAACTGGAA+TGG | - | chr6_1:32082354-32082373 | Msa0882690:intron | 35.0% | |
| !! | TACAGTTCCATTTTGAGAAG+TGG | + | chr6_1:32082474-32082493 | None:intergenic | 35.0% |
| TAACAGAAGGTCATGACATA+TGG | + | chr6_1:32082501-32082520 | None:intergenic | 35.0% | |
| AAATTGTTTCATACTCCCTC+CGG | + | chr6_1:32082801-32082820 | None:intergenic | 35.0% | |
| !!! | TTAGGTTGGACATTTTCAGT+GGG | - | chr6_1:32082957-32082976 | Msa0882690:intron | 35.0% |
| ! | CTTTTTGAACGTGATTAACC+AGG | - | chr6_1:32083164-32083183 | Msa0882690:intron | 35.0% |
| GTCGCAAATGTAAGGAAAAA+TGG | - | chr6_1:32083188-32083207 | Msa0882690:CDS | 35.0% | |
| GCTGAATTGACCATTTATTG+TGG | - | chr6_1:32083448-32083467 | Msa0882690:five_prime_UTR | 35.0% | |
| GAACAACTATACCAGAAACT+TGG | + | chr6_1:32083708-32083727 | None:intergenic | 35.0% | |
| GTATAGTTGTTCTTGCCATA+AGG | - | chr6_1:32083716-32083735 | Msa0882690:five_prime_UTR | 35.0% | |
| TCTTAACCAAGTGACTTCTC+TGG | + | chr6_1:32081987-32082006 | None:intergenic | 40.0% | |
| CTCTTCAACATCGAGAAACT+CGG | - | chr6_1:32082013-32082032 | Msa0882690:intron | 40.0% | |
| TGATTATATATAGAGGGGGC+GGG | + | chr6_1:32082065-32082084 | None:intergenic | 40.0% | |
| CATCAAGCAGTTTCTGTTGT+TGG | + | chr6_1:32082403-32082422 | None:intergenic | 40.0% | |
| GTTGACACCACTTCTCAAAA+TGG | - | chr6_1:32082464-32082483 | Msa0882690:intron | 40.0% | |
| AGCAAGAGAGAAGTAACAGA+AGG | + | chr6_1:32082514-32082533 | None:intergenic | 40.0% | |
| !! | TGTTACTGTTGTTTCTGCTG+TGG | - | chr6_1:32082533-32082552 | Msa0882690:intron | 40.0% |
| TTGCTTATAAATGTGACCGG+AGG | - | chr6_1:32082782-32082801 | Msa0882690:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | - | chr6_1:32082783-32082802 | Msa0882690:intron | 40.0% | |
| !!! | GTTAGGTTGGACATTTTCAG+TGG | - | chr6_1:32082956-32082975 | Msa0882690:intron | 40.0% |
| !! | TAGGTTGGACATTTTCAGTG+GGG | - | chr6_1:32082958-32082977 | Msa0882690:intron | 40.0% |
| CCACATTTCCTGCATTATGA+AGG | + | chr6_1:32083575-32083594 | None:intergenic | 40.0% | |
| CCTTCATAATGCAGGAAATG+TGG | - | chr6_1:32083572-32083591 | Msa0882690:intron | 40.0% | |
| !! | ACAGAAGTGTTCCAAGTTTC+TGG | - | chr6_1:32083694-32083713 | Msa0882690:five_prime_UTR | 40.0% |
| AGAACCTTACCTCTCAAACA+AGG | - | chr6_1:32083769-32083788 | Msa0882690:five_prime_UTR | 40.0% | |
| TCTTAACCAAGTGACTTCTC+TGG | + | chr6_1:32081987-32082006 | None:intergenic | 40.0% | |
| CTCTTCAACATCGAGAAACT+CGG | - | chr6_1:32082013-32082032 | Msa0882690:intron | 40.0% | |
| TGATTATATATAGAGGGGGC+GGG | + | chr6_1:32082065-32082084 | None:intergenic | 40.0% | |
| CATCAAGCAGTTTCTGTTGT+TGG | + | chr6_1:32082403-32082422 | None:intergenic | 40.0% | |
| GTTGACACCACTTCTCAAAA+TGG | - | chr6_1:32082464-32082483 | Msa0882690:intron | 40.0% | |
| AGCAAGAGAGAAGTAACAGA+AGG | + | chr6_1:32082514-32082533 | None:intergenic | 40.0% | |
| !! | TGTTACTGTTGTTTCTGCTG+TGG | - | chr6_1:32082533-32082552 | Msa0882690:intron | 40.0% |
| TTGCTTATAAATGTGACCGG+AGG | - | chr6_1:32082782-32082801 | Msa0882690:intron | 40.0% | |
| TGCTTATAAATGTGACCGGA+GGG | - | chr6_1:32082783-32082802 | Msa0882690:intron | 40.0% | |
| !!! | GTTAGGTTGGACATTTTCAG+TGG | - | chr6_1:32082956-32082975 | Msa0882690:intron | 40.0% |
| !! | TAGGTTGGACATTTTCAGTG+GGG | - | chr6_1:32082958-32082977 | Msa0882690:intron | 40.0% |
| CCACATTTCCTGCATTATGA+AGG | + | chr6_1:32083575-32083594 | None:intergenic | 40.0% | |
| CCTTCATAATGCAGGAAATG+TGG | - | chr6_1:32083572-32083591 | Msa0882690:intron | 40.0% | |
| !! | ACAGAAGTGTTCCAAGTTTC+TGG | - | chr6_1:32083694-32083713 | Msa0882690:five_prime_UTR | 40.0% |
| AGAACCTTACCTCTCAAACA+AGG | - | chr6_1:32083769-32083788 | Msa0882690:five_prime_UTR | 40.0% | |
| CTGAGAGAGAGATGCATCTA+TGG | - | chr6_1:32082297-32082316 | Msa0882690:intron | 45.0% | |
| !! | TACTGTTGTTTCTGCTGTGG+CGG | - | chr6_1:32082536-32082555 | Msa0882690:intron | 45.0% |
| ! | AACCAGGTGTCGCAAATGTA+AGG | - | chr6_1:32083180-32083199 | Msa0882690:CDS | 45.0% |
| TTCCTTACATTTGCGACACC+TGG | + | chr6_1:32083185-32083204 | None:intergenic | 45.0% | |
| CTTGCGAACCTTCATAATGC+AGG | - | chr6_1:32083564-32083583 | Msa0882690:intron | 45.0% | |
| TTCAGTTGCAATTGCGGTGT+AGG | - | chr6_1:32083651-32083670 | Msa0882690:intron | 45.0% | |
| !! | AGAGCCTTGTTTGAGAGGTA+AGG | + | chr6_1:32083776-32083795 | None:intergenic | 45.0% |
| TACCTCTCAAACAAGGCTCT+AGG | - | chr6_1:32083776-32083795 | Msa0882690:five_prime_UTR | 45.0% | |
| ACCTCTCAAACAAGGCTCTA+GGG | - | chr6_1:32083777-32083796 | Msa0882690:five_prime_UTR | 45.0% | |
| CTGAGAGAGAGATGCATCTA+TGG | - | chr6_1:32082297-32082316 | Msa0882690:intron | 45.0% | |
| !! | TACTGTTGTTTCTGCTGTGG+CGG | - | chr6_1:32082536-32082555 | Msa0882690:intron | 45.0% |
| ! | AACCAGGTGTCGCAAATGTA+AGG | - | chr6_1:32083180-32083199 | Msa0882690:CDS | 45.0% |
| TTCCTTACATTTGCGACACC+TGG | + | chr6_1:32083185-32083204 | None:intergenic | 45.0% | |
| CTTGCGAACCTTCATAATGC+AGG | - | chr6_1:32083564-32083583 | Msa0882690:intron | 45.0% | |
| TTCAGTTGCAATTGCGGTGT+AGG | - | chr6_1:32083651-32083670 | Msa0882690:intron | 45.0% | |
| !! | AGAGCCTTGTTTGAGAGGTA+AGG | + | chr6_1:32083776-32083795 | None:intergenic | 45.0% |
| TACCTCTCAAACAAGGCTCT+AGG | - | chr6_1:32083776-32083795 | Msa0882690:five_prime_UTR | 45.0% | |
| ACCTCTCAAACAAGGCTCTA+GGG | - | chr6_1:32083777-32083796 | Msa0882690:five_prime_UTR | 45.0% | |
| ! | CAAGTGACTTCTCTGGAGAC+AGG | + | chr6_1:32081980-32081999 | None:intergenic | 50.0% |
| CTGTCTCCAGAGAAGTCACT+TGG | - | chr6_1:32081978-32081997 | Msa0882690:intron | 50.0% | |
| GAAGGTTCGCAAGTTAACCG+CGG | + | chr6_1:32083557-32083576 | None:intergenic | 50.0% | |
| !! | ACCCTAGAGCCTTGTTTGAG+AGG | + | chr6_1:32083781-32083800 | None:intergenic | 50.0% |
| ! | CAAGTGACTTCTCTGGAGAC+AGG | + | chr6_1:32081980-32081999 | None:intergenic | 50.0% |
| CTGTCTCCAGAGAAGTCACT+TGG | - | chr6_1:32081978-32081997 | Msa0882690:intron | 50.0% | |
| GAAGGTTCGCAAGTTAACCG+CGG | + | chr6_1:32083557-32083576 | None:intergenic | 50.0% | |
| !! | ACCCTAGAGCCTTGTTTGAG+AGG | + | chr6_1:32083781-32083800 | None:intergenic | 50.0% |
| ! | GTGACTTCTCTGGAGACAGG+CGG | + | chr6_1:32081977-32081996 | None:intergenic | 55.0% |
| TCGGTTAGCGACAACCAGAG+AGG | - | chr6_1:32082032-32082051 | Msa0882690:intron | 55.0% | |
| TCAAATTGCGGTTGCAGCCG+CGG | - | chr6_1:32083537-32083556 | Msa0882690:intron | 55.0% | |
| ! | GTGACTTCTCTGGAGACAGG+CGG | + | chr6_1:32081977-32081996 | None:intergenic | 55.0% |
| TCGGTTAGCGACAACCAGAG+AGG | - | chr6_1:32082032-32082051 | Msa0882690:intron | 55.0% | |
| TCAAATTGCGGTTGCAGCCG+CGG | - | chr6_1:32083537-32083556 | Msa0882690:intron | 55.0% | |
| ! | ACTTCTCTGGAGACAGGCGG+AGG | + | chr6_1:32081974-32081993 | None:intergenic | 60.0% |
| ! | ACTTCTCTGGAGACAGGCGG+AGG | + | chr6_1:32081974-32081993 | None:intergenic | 60.0% |
| ! | GGGCGGGTTTCGAACCTCTC+TGG | + | chr6_1:32082049-32082068 | None:intergenic | 65.0% |
| ! | GGGCGGGTTTCGAACCTCTC+TGG | + | chr6_1:32082049-32082068 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 32081927 | 32083808 | 32081927 | ID=Msa0882690;Name=Msa0882690 |
| chr6_1 | mRNA | 32081927 | 32083808 | 32081927 | ID=Msa0882690-mRNA-1;Parent=Msa0882690;Name=Msa0882690-mRNA-1;_AED=0.31;_eAED=0.31;_QI=172|0.5|0.66|0.66|0|0|3|0|95 |
| chr6_1 | exon | 32081927 | 32081964 | 32081927 | ID=Msa0882690-mRNA-1:exon:7980;Parent=Msa0882690-mRNA-1 |
| chr6_1 | exon | 32083178 | 32083472 | 32083178 | ID=Msa0882690-mRNA-1:exon:7979;Parent=Msa0882690-mRNA-1 |
| chr6_1 | exon | 32083682 | 32083808 | 32083682 | ID=Msa0882690-mRNA-1:exon:7978;Parent=Msa0882690-mRNA-1 |
| chr6_1 | five_prime_UTR | 32083682 | 32083808 | 32083682 | ID=Msa0882690-mRNA-1:five_prime_utr;Parent=Msa0882690-mRNA-1 |
| chr6_1 | five_prime_UTR | 32083428 | 32083472 | 32083428 | ID=Msa0882690-mRNA-1:five_prime_utr;Parent=Msa0882690-mRNA-1 |
| chr6_1 | CDS | 32083178 | 32083427 | 32083178 | ID=Msa0882690-mRNA-1:cds;Parent=Msa0882690-mRNA-1 |
| chr6_1 | CDS | 32081927 | 32081964 | 32081927 | ID=Msa0882690-mRNA-1:cds;Parent=Msa0882690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
