Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0009100 | XP_003588429.1 | 97.307 | 557 | 13 | 2 | 1 | 556 | 1 | 556 | 0.0 | 1118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0009100 | sp|Q68EH9|CRBN_DANRE | 36.744 | 215 | 135 | 1 | 333 | 546 | 193 | 407 | 4.93e-41 | 156 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0009100 | 0.819274 | 1.265868e-52 | -8.615850e-47 |
| Msa0008220 | Msa0009100 | 0.812326 | 4.485039e-51 | -8.615850e-47 |
| Msa0009100 | Msa0010770 | 0.809104 | 2.230975e-50 | -8.615850e-47 |
| Msa0009100 | Msa0017320 | 0.820954 | 5.219566e-53 | -8.615850e-47 |
| Msa0009100 | Msa0026910 | 0.802378 | 5.771422e-49 | -8.615850e-47 |
| Msa0009100 | Msa0031180 | 0.813740 | 2.195992e-51 | -8.615850e-47 |
| Msa0009100 | Msa0033880 | 0.812404 | 4.312335e-51 | -8.615850e-47 |
| Msa0009100 | Msa0043500 | 0.824278 | 8.800509e-54 | -8.615850e-47 |
| Msa0009100 | Msa0043650 | 0.814707 | 1.343220e-51 | -8.615850e-47 |
| Msa0009100 | Msa0054820 | 0.835532 | 1.589039e-56 | -8.615850e-47 |
| Msa0009100 | Msa0056450 | 0.801308 | 9.574577e-49 | -8.615850e-47 |
| Msa0009100 | Msa0058600 | 0.867184 | 1.650412e-65 | -8.615850e-47 |
| Msa0009100 | Msa0059890 | 0.818193 | 2.227116e-52 | -8.615850e-47 |
| Msa0009100 | Msa0074750 | 0.858597 | 7.384546e-63 | -8.615850e-47 |
| Msa0009100 | Msa0077900 | 0.803658 | 3.138601e-49 | -8.615850e-47 |
| Msa0009100 | Msa0078480 | 0.816708 | 4.810175e-52 | -8.615850e-47 |
| Msa0009100 | Msa0081650 | 0.852075 | 5.855119e-61 | -8.615850e-47 |
| Msa0009100 | Msa0084430 | 0.810392 | 1.179586e-50 | -8.615850e-47 |
| Msa0009100 | Msa0085370 | 0.813963 | 1.961764e-51 | -8.615850e-47 |
| Msa0009100 | Msa0090390 | 0.806144 | 9.489168e-50 | -8.615850e-47 |
| Msa0009100 | Msa0092440 | 0.814283 | 1.667396e-51 | -8.615850e-47 |
| Msa0009100 | Msa0096580 | 0.824614 | 7.337316e-54 | -8.615850e-47 |
| Msa0009100 | Msa0100160 | 0.822396 | 2.422553e-53 | -8.615850e-47 |
| Msa0009100 | Msa0102270 | 0.803064 | 4.165636e-49 | -8.615850e-47 |
| Msa0009100 | Msa0111080 | 0.806826 | 6.813108e-50 | -8.615850e-47 |
| Msa0009100 | Msa0126230 | 0.802454 | 5.567182e-49 | -8.615850e-47 |
| Msa0009100 | Msa0127850 | 0.812978 | 3.229812e-51 | -8.615850e-47 |
| Msa0009100 | Msa0133720 | 0.805664 | 1.197075e-49 | -8.615850e-47 |
| Msa0009100 | Msa0133820 | 0.819035 | 1.434851e-52 | -8.615850e-47 |
| Msa0009100 | Msa0137870 | 0.804735 | 1.873094e-49 | -8.615850e-47 |
| Msa0009100 | Msa0138210 | 0.826798 | 2.226212e-54 | -8.615850e-47 |
| Msa0009100 | Msa0142500 | 0.802702 | 4.949208e-49 | -8.615850e-47 |
| Msa0009100 | Msa0143850 | 0.811167 | 8.017240e-51 | -8.615850e-47 |
| Msa0009100 | Msa0146080 | 0.812802 | 3.529142e-51 | -8.615850e-47 |
| Msa0009100 | Msa0160670 | 0.827775 | 1.298884e-54 | -8.615850e-47 |
| Msa0009100 | Msa0171870 | 0.800364 | 1.492287e-48 | -8.615850e-47 |
| Msa0009100 | Msa0171980 | 0.810992 | 8.746400e-51 | -8.615850e-47 |
| Msa0009100 | Msa0174000 | 0.819462 | 1.146768e-52 | -8.615850e-47 |
| Msa0009100 | Msa0183420 | 0.814221 | 1.720563e-51 | -8.615850e-47 |
| Msa0009100 | Msa0210260 | 0.829215 | 5.829729e-55 | -8.615850e-47 |
| Msa0009100 | Msa0220730 | 0.804577 | 2.021072e-49 | -8.615850e-47 |
| Msa0009100 | Msa0223330 | 0.808672 | 2.760865e-50 | -8.615850e-47 |
| Msa0009100 | Msa0225670 | 0.834407 | 3.051660e-56 | -8.615850e-47 |
| Msa0009100 | Msa0233370 | 0.822624 | 2.144323e-53 | -8.615850e-47 |
| Msa0009100 | Msa0237200 | 0.801033 | 1.089968e-48 | -8.615850e-47 |
| Msa0009100 | Msa0241140 | 0.801562 | 8.491763e-49 | -8.615850e-47 |
| Msa0009100 | Msa0244970 | 0.819353 | 1.214258e-52 | -8.615850e-47 |
| Msa0009100 | Msa0269520 | 0.807473 | 4.968030e-50 | -8.615850e-47 |
| Msa0009100 | Msa0271550 | 0.800468 | 1.420889e-48 | -8.615850e-47 |
| Msa0009100 | Msa0283420 | 0.800166 | 1.637170e-48 | -8.615850e-47 |
| Msa0009100 | Msa0300150 | 0.805715 | 1.167937e-49 | -8.615850e-47 |
| Msa0009100 | Msa0304100 | 0.827298 | 1.690264e-54 | -8.615850e-47 |
| Msa0009100 | Msa0304840 | 0.834102 | 3.638906e-56 | -8.615850e-47 |
| Msa0009100 | Msa0305330 | 0.812278 | 4.595841e-51 | -8.615850e-47 |
| Msa0009100 | Msa0307310 | 0.801561 | 8.494288e-49 | -8.615850e-47 |
| Msa0009100 | Msa0308440 | 0.806532 | 7.859016e-50 | -8.615850e-47 |
| Msa0009100 | Msa0311720 | 0.806055 | 9.906981e-50 | -8.615850e-47 |
| Msa0009100 | Msa0319290 | 0.815645 | 8.312337e-52 | -8.615850e-47 |
| Msa0009100 | Msa0321690 | 0.802713 | 4.924242e-49 | -8.615850e-47 |
| Msa0009100 | Msa0340690 | 0.813160 | 2.945673e-51 | -8.615850e-47 |
| Msa0009100 | Msa0340710 | 0.803370 | 3.600273e-49 | -8.615850e-47 |
| Msa0009100 | Msa0341230 | 0.834720 | 2.545237e-56 | -8.615850e-47 |
| Msa0009100 | Msa0342010 | 0.811123 | 8.195625e-51 | -8.615850e-47 |
| Msa0009100 | Msa0346990 | 0.809942 | 1.474324e-50 | -8.615850e-47 |
| Msa0009100 | Msa0347950 | 0.807907 | 4.019296e-50 | -8.615850e-47 |
| Msa0009100 | Msa0347990 | 0.815992 | 6.958047e-52 | -8.615850e-47 |
| Msa0009100 | Msa0362890 | 0.805358 | 1.387354e-49 | -8.615850e-47 |
| Msa0009100 | Msa0363810 | 0.810412 | 1.167831e-50 | -8.615850e-47 |
| Msa0009100 | Msa0376600 | 0.811421 | 7.060203e-51 | -8.615850e-47 |
| Msa0009100 | Msa0377440 | 0.801192 | 1.011191e-48 | -8.615850e-47 |
| Msa0009100 | Msa0382310 | 0.804349 | 2.254102e-49 | -8.615850e-47 |
| Msa0009100 | Msa0382370 | 0.820281 | 7.450223e-53 | -8.615850e-47 |
| Msa0009100 | Msa0387050 | 0.822251 | 2.617769e-53 | -8.615850e-47 |
| Msa0009100 | Msa0392200 | 0.800845 | 1.190560e-48 | -8.615850e-47 |
| Msa0009100 | Msa0394690 | 0.816692 | 4.851005e-52 | -8.615850e-47 |
| Msa0009100 | Msa0395980 | 0.825180 | 5.394574e-54 | -8.615850e-47 |
| Msa0009100 | Msa0403490 | 0.817541 | 3.126277e-52 | -8.615850e-47 |
| Msa0009100 | Msa0410300 | 0.807505 | 4.891681e-50 | -8.615850e-47 |
| Msa0009100 | Msa0411410 | 0.815046 | 1.129504e-51 | -8.615850e-47 |
| Msa0009100 | Msa0417650 | 0.822897 | 1.852487e-53 | -8.615850e-47 |
| Msa0009100 | Msa0428050 | 0.800391 | 1.473285e-48 | -8.615850e-47 |
| Msa0009100 | Msa0431210 | 0.809711 | 1.653346e-50 | -8.615850e-47 |
| Msa0009100 | Msa0432160 | 0.829241 | 5.746247e-55 | -8.615850e-47 |
| Msa0009100 | Msa0446900 | 0.801839 | 7.452158e-49 | -8.615850e-47 |
| Msa0009100 | Msa0455740 | 0.801098 | 1.056908e-48 | -8.615850e-47 |
| Msa0009100 | Msa0461590 | 0.809004 | 2.344717e-50 | -8.615850e-47 |
| Msa0009100 | Msa0468320 | 0.806991 | 6.286053e-50 | -8.615850e-47 |
| Msa0009100 | Msa0473980 | 0.812937 | 3.297224e-51 | -8.615850e-47 |
| Msa0009100 | Msa0476680 | 0.830416 | 2.973917e-55 | -8.615850e-47 |
| Msa0009100 | Msa0480780 | 0.806053 | 9.916053e-50 | -8.615850e-47 |
| Msa0009100 | Msa0482180 | 0.810693 | 1.015550e-50 | -8.615850e-47 |
| Msa0009100 | Msa0483740 | 0.834129 | 3.583261e-56 | -8.615850e-47 |
| Msa0009100 | Msa0491000 | 0.816719 | 4.783662e-52 | -8.615850e-47 |
| Msa0009100 | Msa0510290 | 0.829251 | 5.716001e-55 | -8.615850e-47 |
| Msa0009100 | Msa0512870 | 0.806359 | 8.547965e-50 | -8.615850e-47 |
| Msa0009100 | Msa0514610 | 0.808621 | 2.831012e-50 | -8.615850e-47 |
| Msa0009100 | Msa0516120 | 0.819040 | 1.431035e-52 | -8.615850e-47 |
| Msa0009100 | Msa0520270 | 0.804618 | 1.981718e-49 | -8.615850e-47 |
| Msa0009100 | Msa0521010 | 0.829753 | 4.314741e-55 | -8.615850e-47 |
| Msa0009100 | Msa0531250 | 0.804859 | 1.764745e-49 | -8.615850e-47 |
| Msa0009100 | Msa0537770 | 0.802431 | 5.627712e-49 | -8.615850e-47 |
| Msa0009100 | Msa0560500 | 0.811723 | 6.070884e-51 | -8.615850e-47 |
| Msa0009100 | Msa0576680 | 0.817931 | 2.553154e-52 | -8.615850e-47 |
| Msa0009100 | Msa0588090 | 0.807390 | 5.175458e-50 | -8.615850e-47 |
| Msa0009100 | Msa0592180 | 0.801140 | 1.036080e-48 | -8.615850e-47 |
| Msa0009100 | Msa0594200 | 0.825546 | 4.419307e-54 | -8.615850e-47 |
| Msa0009100 | Msa0614510 | 0.808728 | 2.685769e-50 | -8.615850e-47 |
| Msa0009100 | Msa0615220 | 0.827358 | 1.634911e-54 | -8.615850e-47 |
| Msa0009100 | Msa0618950 | 0.817649 | 2.955357e-52 | -8.615850e-47 |
| Msa0009100 | Msa0620620 | 0.801609 | 8.306970e-49 | -8.615850e-47 |
| Msa0009100 | Msa0621600 | 0.800233 | 1.586303e-48 | -8.615850e-47 |
| Msa0009100 | Msa0629430 | 0.804026 | 2.632350e-49 | -8.615850e-47 |
| Msa0009100 | Msa0640940 | 0.801056 | 1.078079e-48 | -8.615850e-47 |
| Msa0009100 | Msa0641340 | 0.803782 | 2.957351e-49 | -8.615850e-47 |
| Msa0009100 | Msa0641730 | 0.827952 | 1.177365e-54 | -8.615850e-47 |
| Msa0009100 | Msa0652690 | 0.804181 | 2.444084e-49 | -8.615850e-47 |
| Msa0009100 | Msa0658680 | 0.809222 | 2.105216e-50 | -8.615850e-47 |
| Msa0009100 | Msa0686080 | 0.813644 | 2.305904e-51 | -8.615850e-47 |
| Msa0009100 | Msa0687450 | 0.813035 | 3.138714e-51 | -8.615850e-47 |
| Msa0009100 | Msa0689420 | 0.808213 | 3.458018e-50 | -8.615850e-47 |
| Msa0009100 | Msa0689760 | 0.835538 | 1.583222e-56 | -8.615850e-47 |
| Msa0009100 | Msa0697720 | 0.810767 | 9.786567e-51 | -8.615850e-47 |
| Msa0009100 | Msa0705390 | 0.836499 | 9.029944e-57 | -8.615850e-47 |
| Msa0009100 | Msa0713320 | 0.806857 | 6.710326e-50 | -8.615850e-47 |
| Msa0009100 | Msa0713870 | 0.800094 | 1.693638e-48 | -8.615850e-47 |
| Msa0009100 | Msa0716860 | 0.826557 | 2.540832e-54 | -8.615850e-47 |
| Msa0009100 | Msa0741070 | 0.801635 | 8.206300e-49 | -8.615850e-47 |
| Msa0009100 | Msa0743530 | 0.812893 | 3.371378e-51 | -8.615850e-47 |
| Msa0009100 | Msa0749400 | 0.809787 | 1.592359e-50 | -8.615850e-47 |
| Msa0009100 | Msa0756110 | 0.809129 | 2.204112e-50 | -8.615850e-47 |
| Msa0009100 | Msa0756380 | 0.804424 | 2.175151e-49 | -8.615850e-47 |
| Msa0009100 | Msa0758130 | 0.800330 | 1.516015e-48 | -8.615850e-47 |
| Msa0009100 | Msa0763890 | 0.813297 | 2.748687e-51 | -8.615850e-47 |
| Msa0009100 | Msa0763920 | 0.821672 | 3.564037e-53 | -8.615850e-47 |
| Msa0009100 | Msa0787150 | 0.813843 | 2.084495e-51 | -8.615850e-47 |
| Msa0009100 | Msa0789560 | 0.844976 | 5.414280e-59 | -8.615850e-47 |
| Msa0009100 | Msa0800700 | 0.807202 | 5.671794e-50 | -8.615850e-47 |
| Msa0009100 | Msa0832090 | 0.815209 | 1.039381e-51 | -8.615850e-47 |
| Msa0009100 | Msa0861470 | 0.804075 | 2.571155e-49 | -8.615850e-47 |
| Msa0009100 | Msa0861570 | 0.808485 | 3.025859e-50 | -8.615850e-47 |
| Msa0009100 | Msa0865570 | 0.803060 | 4.175026e-49 | -8.615850e-47 |
| Msa0009100 | Msa0870650 | 0.801159 | 1.027092e-48 | -8.615850e-47 |
| Msa0009100 | Msa0880040 | 0.844518 | 7.195461e-59 | -8.615850e-47 |
| Msa0009100 | Msa0880810 | 0.808590 | 2.874639e-50 | -8.615850e-47 |
| Msa0009100 | Msa0892570 | 0.801690 | 7.995400e-49 | -8.615850e-47 |
| Msa0009100 | Msa0900620 | 0.800878 | 1.172369e-48 | -8.615850e-47 |
| Msa0009100 | Msa0937430 | 0.800277 | 1.553873e-48 | -8.615850e-47 |
| Msa0009100 | Msa0945240 | 0.807965 | 3.906350e-50 | -8.615850e-47 |
| Msa0009100 | Msa0958030 | 0.822429 | 2.379693e-53 | -8.615850e-47 |
| Msa0009100 | Msa0986510 | 0.809600 | 1.746766e-50 | -8.615850e-47 |
| Msa0009100 | Msa0992580 | 0.804951 | 1.687852e-49 | -8.615850e-47 |
| Msa0009100 | Msa0992600 | 0.813503 | 2.476695e-51 | -8.615850e-47 |
| Msa0009100 | Msa0996020 | 0.806160 | 9.414720e-50 | -8.615850e-47 |
| Msa0009100 | Msa0998590 | 0.810100 | 1.363347e-50 | -8.615850e-47 |
| Msa0009100 | Msa1026640 | 0.803325 | 3.679547e-49 | -8.615850e-47 |
| Msa0009100 | Msa1027360 | 0.805983 | 1.025441e-49 | -8.615850e-47 |
| Msa0009100 | Msa1036740 | 0.828498 | 8.694577e-55 | -8.615850e-47 |
| Msa0009100 | Msa1042660 | 0.805613 | 1.226600e-49 | -8.615850e-47 |
| Msa0009100 | Msa1063420 | 0.806767 | 7.009771e-50 | -8.615850e-47 |
| Msa0009100 | Msa1071320 | 0.810705 | 1.009518e-50 | -8.615850e-47 |
| Msa0009100 | Msa1072600 | 0.809191 | 2.137348e-50 | -8.615850e-47 |
| Msa0009100 | Msa1077070 | 0.843466 | 1.377686e-58 | -8.615850e-47 |
| Msa0009100 | Msa1098890 | 0.826111 | 3.244884e-54 | -8.615850e-47 |
| Msa0009100 | Msa1113590 | 0.817125 | 3.878348e-52 | -8.615850e-47 |
| Msa0009100 | Msa1121110 | 0.816344 | 5.805245e-52 | -8.615850e-47 |
| Msa0009100 | Msa1122780 | 0.845069 | 5.109017e-59 | -8.615850e-47 |
| Msa0009100 | Msa1127430 | 0.824483 | 7.877257e-54 | -8.615850e-47 |
| Msa0009100 | Msa1130530 | 0.814511 | 1.484705e-51 | -8.615850e-47 |
| Msa0009100 | Msa1158230 | 0.807825 | 4.182387e-50 | -8.615850e-47 |
| Msa0009100 | Msa1163870 | 0.827203 | 1.780659e-54 | -8.615850e-47 |
| Msa0009100 | Msa1190970 | 0.805887 | 1.074406e-49 | -8.615850e-47 |
| Msa0009100 | Msa1199710 | 0.801170 | 1.021744e-48 | -8.615850e-47 |
| Msa0009100 | Msa1201640 | 0.832741 | 7.952682e-56 | -8.615850e-47 |
| Msa0009100 | Msa1201810 | 0.826735 | 2.304876e-54 | -8.615850e-47 |
| Msa0009100 | Msa1205590 | 0.804795 | 1.819571e-49 | -8.615850e-47 |
| Msa0009100 | Msa1209190 | 0.822155 | 2.755799e-53 | -8.615850e-47 |
| Msa0009100 | Msa1211340 | 0.823890 | 1.085712e-53 | -8.615850e-47 |
| Msa0009100 | Msa1218580 | 0.809089 | 2.247933e-50 | -8.615850e-47 |
| Msa0009100 | Msa1244640 | 0.802295 | 6.003448e-49 | -8.615850e-47 |
| Msa0009100 | Msa1250730 | 0.808926 | 2.436560e-50 | -8.615850e-47 |
| Msa0009100 | Msa1254620 | 0.819004 | 1.457904e-52 | -8.615850e-47 |
| Msa0009100 | Msa1258370 | 0.816612 | 5.055417e-52 | -8.615850e-47 |
| Msa0009100 | Msa1259640 | 0.824200 | 9.180279e-54 | -8.615850e-47 |
| Msa0009100 | Msa1270660 | 0.802133 | 6.484201e-49 | -8.615850e-47 |
| Msa0009100 | Msa1280620 | 0.803716 | 3.052341e-49 | -8.615850e-47 |
| Msa0009100 | Msa1286550 | 0.817822 | 2.701960e-52 | -8.615850e-47 |
| Msa0009100 | Msa1293590 | 0.804829 | 1.790594e-49 | -8.615850e-47 |
| Msa0009100 | Msa1296300 | 0.805379 | 1.373710e-49 | -8.615850e-47 |
| Msa0009100 | Msa1297530 | 0.813573 | 2.390555e-51 | -8.615850e-47 |
| Msa0009100 | Msa1304810 | 0.825469 | 4.608607e-54 | -8.615850e-47 |
| Msa0009100 | Msa1305200 | 0.815276 | 1.004559e-51 | -8.615850e-47 |
| Msa0009100 | Msa1305350 | 0.819729 | 9.966354e-53 | -8.615850e-47 |
| Msa0009100 | Msa1320820 | 0.833144 | 6.311959e-56 | -8.615850e-47 |
| Msa0009100 | Msa1329790 | 0.822785 | 1.966870e-53 | -8.615850e-47 |
| Msa0009100 | Msa1333420 | 0.800504 | 1.397548e-48 | -8.615850e-47 |
| Msa0009100 | Msa1336040 | 0.828601 | 8.212103e-55 | -8.615850e-47 |
| Msa0009100 | Msa1341490 | 0.826887 | 2.120087e-54 | -8.615850e-47 |
| Msa0009100 | Msa1349450 | 0.821357 | 4.215722e-53 | -8.615850e-47 |
| Msa0009100 | Msa1356610 | 0.800115 | 1.676746e-48 | -8.615850e-47 |
| Msa0009100 | Msa1359560 | 0.819246 | 1.284397e-52 | -8.615850e-47 |
| Msa0009100 | Msa1372290 | 0.803544 | 3.314207e-49 | -8.615850e-47 |
| Msa0009100 | Msa1381650 | 0.803590 | 3.241269e-49 | -8.615850e-47 |
| Msa0009100 | Msa1382790 | 0.806541 | 7.823032e-50 | -8.615850e-47 |
| Msa0009100 | Msa1393800 | 0.805441 | 1.333203e-49 | -8.615850e-47 |
| Msa0009100 | Msa1401460 | 0.806635 | 7.474314e-50 | -8.615850e-47 |
| Msa0009100 | Msa1416260 | 0.800381 | 1.480001e-48 | -8.615850e-47 |
| Msa0009100 | Msa1420250 | 0.832854 | 7.453521e-56 | -8.615850e-47 |
| Msa0009100 | Msa1426570 | 0.807018 | 6.203674e-50 | -8.615850e-47 |
| Msa0009100 | Msa1426910 | 0.838640 | 2.550502e-57 | -8.615850e-47 |
| Msa0009100 | Msa1434040 | 0.811990 | 5.310267e-51 | -8.615850e-47 |
| Msa0009100 | Msa1435260 | 0.800601 | 1.335028e-48 | -8.615850e-47 |
| Msa0009100 | Msa1436600 | 0.806673 | 7.339610e-50 | -8.615850e-47 |
| Msa0009100 | Msa1437330 | 0.813360 | 2.662518e-51 | -8.615850e-47 |
| Msa0009100 | Msa1438520 | 0.800971 | 1.122085e-48 | -8.615850e-47 |
| Msa0009100 | Msa1439710 | 0.804418 | 2.181511e-49 | -8.615850e-47 |
| Msa0009100 | Msa1446780 | 0.801106 | 1.052811e-48 | -8.615850e-47 |
| Msa0009100 | Msa1450720 | 0.818614 | 1.788157e-52 | -8.615850e-47 |
| Msa0009100 | Msa1454960 | 0.813874 | 2.052448e-51 | -8.615850e-47 |
| Msa0009100 | Msa1462360 | 0.803512 | 3.364405e-49 | -8.615850e-47 |
| Msa0009100 | Msa1463600 | 0.817202 | 3.726619e-52 | -8.615850e-47 |
| Msa0009100 | Msa1467000 | 0.811522 | 6.712576e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0009100 | MtrunA17_Chr1g0146311 | 97.307 | 557 | 13 | 2 | 1 | 556 | 1 | 556 | 0.0 | 1118 |
| Msa0009100 | MtrunA17_Chr3g0140511 | 63.168 | 543 | 160 | 9 | 17 | 554 | 19 | 526 | 0.0 | 641 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0009100 | AT2G25740.1 | 57.195 | 549 | 218 | 8 | 13 | 554 | 7 | 545 | 0.0 | 575 |
| Msa0009100 | AT2G25740.2 | 57.906 | 487 | 192 | 5 | 73 | 554 | 2 | 480 | 0.0 | 553 |
Find 140 sgRNAs with CRISPR-Local
Find 457 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTCACTTTCCTCGTTTA+AGG | 0.119107 | 1_1:+13297169 | None:intergenic |
| AACTGAAACCTAAGTCATTT+TGG | 0.130038 | 1_1:-13294109 | Msa0009100:CDS |
| TCAGGAGTTGTGCTCTTTCC+TGG | 0.184844 | 1_1:-13298469 | Msa0009100:intron |
| TACAAAATATAGTTGGTTTC+CGG | 0.206516 | 1_1:-13294768 | Msa0009100:CDS |
| ATCTACAAGGCAGGAGCTTT+TGG | 0.232171 | 1_1:-13295252 | Msa0009100:CDS |
| CCTTCAAAGTATTCTGTTGA+TGG | 0.250991 | 1_1:-13297200 | Msa0009100:CDS |
| CCATCAGAGAAGGGCTTAAT+TGG | 0.255033 | 1_1:-13296896 | Msa0009100:CDS |
| CTCAACAGCAGCCACAAAAT+TGG | 0.255978 | 1_1:+13298417 | None:intergenic |
| TTATTTGGAGGTGTTATATT+TGG | 0.276236 | 1_1:-13293788 | Msa0009100:three_prime_UTR |
| TGGGATGTTTCTTAGCCTTA+TGG | 0.277487 | 1_1:-13297329 | Msa0009100:intron |
| TGGGTTTATCCATGGTTATT+TGG | 0.287391 | 1_1:-13293803 | Msa0009100:three_prime_UTR |
| ATAGGGAGCTGTTCCTCTTC+TGG | 0.290687 | 1_1:-13296930 | Msa0009100:CDS |
| AGCATCCTTACATACATATC+TGG | 0.290747 | 1_1:-13299308 | Msa0009100:CDS |
| GATTCAAAAGTTTAGGGTTT+TGG | 0.292367 | 1_1:+13300706 | None:intergenic |
| GCAAATGGATTAGCTCTAAC+TGG | 0.318248 | 1_1:-13294800 | Msa0009100:CDS |
| TTCATGCTGCAATATGAATA+TGG | 0.324531 | 1_1:+13294006 | None:intergenic |
| GCTGGAGAATTTGCTCGATT+TGG | 0.331253 | 1_1:+13300623 | None:intergenic |
| CGAACTCCAAGGGATGCTTT+TGG | 0.340355 | 1_1:-13297272 | Msa0009100:CDS |
| CAGGAGTTGTGCTCTTTCCT+GGG | 0.344746 | 1_1:-13298468 | Msa0009100:CDS |
| TATTTGGAGGTGTTATATTT+GGG | 0.344945 | 1_1:-13293787 | Msa0009100:three_prime_UTR |
| ACAAAATATAGTTGGTTTCC+GGG | 0.353288 | 1_1:-13294767 | Msa0009100:CDS |
| AGGTGTTATATTTGGGTGTT+GGG | 0.362242 | 1_1:-13293780 | Msa0009100:three_prime_UTR |
| CTCCTATTTGCTTGCACAAA+GGG | 0.372296 | 1_1:-13296793 | Msa0009100:CDS |
| AAGAGCATTCTTGCCTGGTT+GGG | 0.374410 | 1_1:-13296832 | Msa0009100:CDS |
| GAAAATCTGGATTCTAGAAT+AGG | 0.375236 | 1_1:-13296948 | Msa0009100:CDS |
| TTGCAGTACTAGTGAACATT+TGG | 0.386437 | 1_1:-13294033 | Msa0009100:three_prime_UTR |
| GGTGTCTGGTGTATTTAGAT+TGG | 0.391654 | 1_1:+13297007 | None:intergenic |
| TGCCTTGTAGATTCAGAAAC+AGG | 0.392651 | 1_1:+13295263 | None:intergenic |
| TAATACAATAGTCCTGGTTA+TGG | 0.393385 | 1_1:-13299376 | Msa0009100:intron |
| GAGGTGTTATATTTGGGTGT+TGG | 0.394268 | 1_1:-13293781 | Msa0009100:three_prime_UTR |
| GCATTTACATACGCACCAAC+AGG | 0.399570 | 1_1:+13294860 | None:intergenic |
| CGTATACCCCAAAATGACTT+AGG | 0.415553 | 1_1:+13294101 | None:intergenic |
| GTCAGGTAGCAATGGTGTTA+AGG | 0.425291 | 1_1:+13296986 | None:intergenic |
| GGATGAAAACCGCAAGCATT+GGG | 0.425357 | 1_1:-13298213 | Msa0009100:CDS |
| GTTGCAAGGAAGATTACTTA+AGG | 0.430591 | 1_1:+13297238 | None:intergenic |
| TGATTCATCATATTCAAAAC+TGG | 0.431365 | 1_1:+13297082 | None:intergenic |
| AAAATCTGGATTCTAGAATA+GGG | 0.431861 | 1_1:-13296947 | Msa0009100:CDS |
| ACGACTTTGTACAAGGCAAA+TGG | 0.435116 | 1_1:-13294815 | Msa0009100:CDS |
| CAGCACTTACAAAATATAGT+TGG | 0.442633 | 1_1:-13294775 | Msa0009100:CDS |
| TACAAATGTAAGGACTAGAT+TGG | 0.446252 | 1_1:-13293823 | Msa0009100:three_prime_UTR |
| TGGCACCGCAGGCGTCGTCC+CGG | 0.453194 | 1_1:-13299356 | Msa0009100:CDS |
| AGCCCTTTGTGCAAGCAAAT+AGG | 0.456513 | 1_1:+13296791 | None:intergenic |
| CCATCAACAGAATACTTTGA+AGG | 0.459522 | 1_1:+13297200 | None:intergenic |
| GTTTATCCATGGTTATTTGG+AGG | 0.464111 | 1_1:-13293800 | Msa0009100:three_prime_UTR |
| ATAGAAAATGATAAAACATC+AGG | 0.465475 | 1_1:+13295299 | None:intergenic |
| AAAGTATTCTGTTGATGGAC+AGG | 0.466460 | 1_1:-13297195 | Msa0009100:CDS |
| TTGCTTGCACAAAGGGCTGC+AGG | 0.469589 | 1_1:-13296786 | Msa0009100:intron |
| TTGCAAGGAAGATTACTTAA+GGG | 0.474428 | 1_1:+13297239 | None:intergenic |
| CAAGAGCATTCTTGCCTGGT+TGG | 0.476744 | 1_1:-13296833 | Msa0009100:CDS |
| CCAATTAAGCCCTTCTCTGA+TGG | 0.476760 | 1_1:+13296896 | None:intergenic |
| AGCAATGGTGTTAAGGTGTC+TGG | 0.483283 | 1_1:+13296993 | None:intergenic |
| TGGAACAAATGAGTGATTGA+TGG | 0.485302 | 1_1:+13297102 | None:intergenic |
| TGCCACATGTGAAACCCATA+TGG | 0.487704 | 1_1:-13294159 | Msa0009100:CDS |
| TTGCGGTATCGCTGAAAACT+CGG | 0.488849 | 1_1:+13298242 | None:intergenic |
| ATTTCAAGAGCATTCTTGCC+TGG | 0.489166 | 1_1:-13296837 | Msa0009100:CDS |
| ACAAATGTAAGGACTAGATT+GGG | 0.493278 | 1_1:-13293822 | Msa0009100:three_prime_UTR |
| GACTAGATTGGGTTTATCCA+TGG | 0.495558 | 1_1:-13293811 | Msa0009100:three_prime_UTR |
| CCTACCACGCCAATGGTGTA+AGG | 0.498310 | 1_1:+13298370 | None:intergenic |
| TGGAGAGATCCAAATTATTG+AGG | 0.501224 | 1_1:-13297309 | Msa0009100:CDS |
| TTAACAAGAGCATCCATGCT+TGG | 0.501936 | 1_1:+13295326 | None:intergenic |
| GAAACCAGCATACAAATGTA+AGG | 0.503260 | 1_1:-13293833 | Msa0009100:intron |
| TTACTTCTGGCAGGTATGCA+TGG | 0.505297 | 1_1:-13294196 | Msa0009100:intron |
| ATTGGATTCAATAACTCTCA+AGG | 0.506992 | 1_1:+13298435 | None:intergenic |
| AGGATGAAAACCGCAAGCAT+TGG | 0.510037 | 1_1:-13298214 | Msa0009100:CDS |
| AACTTACAGATTCGACAGTA+CGG | 0.510427 | 1_1:-13297552 | Msa0009100:intron |
| ACCGCCCAGATATGTATGTA+AGG | 0.515100 | 1_1:+13299303 | None:intergenic |
| AATCGTTGGTGCACCAAGCA+TGG | 0.515353 | 1_1:-13295339 | Msa0009100:CDS |
| TGCAGTCGTCCCAATGCTTG+CGG | 0.517908 | 1_1:+13298204 | None:intergenic |
| ACGCCTGCGGTGCCATAACC+AGG | 0.521569 | 1_1:+13299364 | None:intergenic |
| ATAATTTGGATCTCTCCATA+AGG | 0.522393 | 1_1:+13297314 | None:intergenic |
| GGTGCGTATGTAAATGCAAC+TGG | 0.523461 | 1_1:-13294854 | Msa0009100:CDS |
| ATTCACATATGAGTCAGATC+AGG | 0.524093 | 1_1:-13297039 | Msa0009100:CDS |
| GGCACCGCAGGCGTCGTCCC+GGG | 0.527337 | 1_1:-13299355 | Msa0009100:CDS |
| CCCCATATGGGTTTCACATG+TGG | 0.529870 | 1_1:+13294157 | None:intergenic |
| GTTGTTGTTGTTGTCATCAT+CGG | 0.537938 | 1_1:+13300549 | None:intergenic |
| GTTGACGTTCCTTACACCAT+TGG | 0.538392 | 1_1:-13298379 | Msa0009100:CDS |
| AGTCCTGGTTATGGCACCGC+AGG | 0.541575 | 1_1:-13299367 | Msa0009100:CDS |
| GCAATTCTTCGAGATCGAGC+TGG | 0.553019 | 1_1:+13300605 | None:intergenic |
| AGGAGTTGTGCTCTTTCCTG+GGG | 0.553657 | 1_1:-13298467 | Msa0009100:CDS |
| GCTTTCGCTTAAGACGGTGT+TGG | 0.556837 | 1_1:-13297482 | Msa0009100:CDS |
| TAATTGAGGATTACAAACAT+TGG | 0.558098 | 1_1:+13293733 | None:intergenic |
| GCATCCTTACATACATATCT+GGG | 0.559575 | 1_1:-13299307 | Msa0009100:CDS |
| AAACAATCCTCCATCAGAGA+AGG | 0.563310 | 1_1:-13296906 | Msa0009100:CDS |
| TGTTTCTGAATCTACAAGGC+AGG | 0.563311 | 1_1:-13295261 | Msa0009100:CDS |
| AATTCGATGTAAAATCTGCC+AGG | 0.564880 | 1_1:-13295168 | Msa0009100:intron |
| ACTTACAGATTCGACAGTAC+GGG | 0.570721 | 1_1:-13297551 | Msa0009100:intron |
| CAGTACGGGCGCCTAGAGGA+TGG | 0.572399 | 1_1:-13297537 | Msa0009100:CDS |
| CAAATGGATTAGCTCTAACT+GGG | 0.573810 | 1_1:-13294799 | Msa0009100:CDS |
| TGCAAAGCGGAGTGATATGC+TGG | 0.576040 | 1_1:-13294900 | Msa0009100:CDS |
| CATTCAACGAACCATCCTCT+AGG | 0.576324 | 1_1:+13297526 | None:intergenic |
| AACACACTGGCACGGTTGCA+AGG | 0.577040 | 1_1:+13297224 | None:intergenic |
| AGCATGAATATTGATGATAC+AGG | 0.577675 | 1_1:-13293991 | Msa0009100:three_prime_UTR |
| ACATACCATCGCGAACTCCA+AGG | 0.577866 | 1_1:-13297283 | Msa0009100:CDS |
| TCAGCGATACCGCAAATCGT+AGG | 0.579115 | 1_1:-13298234 | Msa0009100:CDS |
| GCCACATGTGAAACCCATAT+GGG | 0.579463 | 1_1:-13294158 | Msa0009100:CDS |
| GGATCTCATATAGATTGCGT+AGG | 0.582958 | 1_1:-13295220 | Msa0009100:CDS |
| ATGTCTAGTGAAGGCCCTGT+TGG | 0.586333 | 1_1:-13294875 | Msa0009100:CDS |
| GTTCATGATCTGTAGATATG+TGG | 0.588117 | 1_1:-13295367 | Msa0009100:intron |
| ACTCCTATTTGCTTGCACAA+AGG | 0.591007 | 1_1:-13296794 | Msa0009100:CDS |
| CAAAATATAGTTGGTTTCCG+GGG | 0.591312 | 1_1:-13294766 | Msa0009100:intron |
| ATTAAGCCCTTCTCTGATGG+AGG | 0.592131 | 1_1:+13296899 | None:intergenic |
| AAATTCTATGTGAGGAGTAG+CGG | 0.594080 | 1_1:+13296856 | None:intergenic |
| TACCTGTTTCTGAATCTACA+AGG | 0.597932 | 1_1:-13295265 | Msa0009100:CDS |
| CGGTGTTGGATCGATGTGGA+AGG | 0.598035 | 1_1:-13297468 | Msa0009100:CDS |
| TTGGATTCAATAACTCTCAA+GGG | 0.598542 | 1_1:+13298436 | None:intergenic |
| TGAGATAACGACTTTGTACA+AGG | 0.599821 | 1_1:-13294822 | Msa0009100:CDS |
| AACAATCCTCCATCAGAGAA+GGG | 0.602387 | 1_1:-13296905 | Msa0009100:CDS |
| TGCTCTTGAAATTCTATGTG+AGG | 0.603043 | 1_1:+13296848 | None:intergenic |
| TCGTTGAATGTGGTCACTCG+TGG | 0.603436 | 1_1:-13297513 | Msa0009100:CDS |
| TTCACCCGGGACGACGCCTG+CGG | 0.608625 | 1_1:+13299351 | None:intergenic |
| CTCAAGGGAAGAGTAGCCCC+AGG | 0.609607 | 1_1:+13298451 | None:intergenic |
| AGAGGATGGTTCGTTGAATG+TGG | 0.609930 | 1_1:-13297523 | Msa0009100:CDS |
| CATACCATCGCGAACTCCAA+GGG | 0.610151 | 1_1:-13297282 | Msa0009100:CDS |
| ATGTTGAAGACACACATCAC+AGG | 0.621960 | 1_1:-13299176 | Msa0009100:CDS |
| TTGGATCGATGTGGAAGGAG+TGG | 0.625144 | 1_1:-13297463 | Msa0009100:intron |
| GATCTCATATAGATTGCGTA+GGG | 0.626453 | 1_1:-13295219 | Msa0009100:CDS |
| GGATTTACCTACCACGCCAA+TGG | 0.626908 | 1_1:+13298363 | None:intergenic |
| ATAACACCTCCAAATAACCA+TGG | 0.630379 | 1_1:+13293794 | None:intergenic |
| TTGAAGGCAACACACTGGCA+CGG | 0.631838 | 1_1:+13297216 | None:intergenic |
| AACATACGATATACCCAACC+AGG | 0.631908 | 1_1:+13296819 | None:intergenic |
| AACAACGCTTTCGCTTAAGA+CGG | 0.633073 | 1_1:-13297488 | Msa0009100:CDS |
| GTATTGTAAGTGAATTCACC+CGG | 0.633782 | 1_1:+13299337 | None:intergenic |
| TGTCATCATCGGAAGAATCG+TGG | 0.635083 | 1_1:+13300560 | None:intergenic |
| AAGTATAAAGTTCCAGACGA+TGG | 0.637472 | 1_1:-13293930 | Msa0009100:three_prime_UTR |
| GCATCCCTTGGAGTTCGCGA+TGG | 0.645866 | 1_1:+13297278 | None:intergenic |
| ATACTTTGAAGGCAACACAC+TGG | 0.657192 | 1_1:+13297211 | None:intergenic |
| AAGCATTGGGACGACTGCAG+AGG | 0.657758 | 1_1:-13298200 | Msa0009100:intron |
| CATTTACATACGCACCAACA+GGG | 0.660144 | 1_1:+13294861 | None:intergenic |
| CATGTGAAACCCATATGGGG+TGG | 0.666966 | 1_1:-13294154 | Msa0009100:CDS |
| TCGACAGTACGGGCGCCTAG+AGG | 0.677937 | 1_1:-13297541 | Msa0009100:CDS |
| TGTAGATTATAATTGCAAAG+CGG | 0.679418 | 1_1:-13294913 | Msa0009100:intron |
| CGTTCCTTACACCATTGGCG+TGG | 0.682501 | 1_1:-13298374 | Msa0009100:intron |
| AAGACGGTGTTGGATCGATG+TGG | 0.691734 | 1_1:-13297472 | Msa0009100:CDS |
| ATGCTGGTGATGTCTAGTGA+AGG | 0.693369 | 1_1:-13294884 | Msa0009100:CDS |
| TATGATGAATCAGCAAGTAG+TGG | 0.696041 | 1_1:-13297071 | Msa0009100:CDS |
| GATATGTGGAAGCAAATCGT+TGG | 0.703389 | 1_1:-13295353 | Msa0009100:CDS |
| CCACATGTGAAACCCATATG+GGG | 0.708560 | 1_1:-13294157 | Msa0009100:CDS |
| TCCTTACATACATATCTGGG+CGG | 0.722690 | 1_1:-13299304 | Msa0009100:intron |
| TATTGTAAGTGAATTCACCC+GGG | 0.729958 | 1_1:+13299338 | None:intergenic |
| TGGACAGGACTCCTTAAACG+AGG | 0.758674 | 1_1:-13297180 | Msa0009100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGATATGTTAAATATTTATA+TGG | - | chr1_1:13297817-13297836 | Msa0009100:intron | 10.0% |
| !!! | TGTTTTTCTAATATTTATAT+AGG | - | chr1_1:13299400-13299419 | Msa0009100:intron | 10.0% |
| !! | ATCTTTATATTTATTGTATA+AGG | + | chr1_1:13299909-13299928 | None:intergenic | 10.0% |
| !! | TCTAAATTATTTATTATAAC+TGG | + | chr1_1:13299935-13299954 | None:intergenic | 10.0% |
| !!! | ATTTTTGATTCAAAAGTTTA+GGG | + | chr1_1:13293824-13293843 | None:intergenic | 15.0% |
| !!! | AAATCAATAACAATCAATTT+TGG | + | chr1_1:13294212-13294231 | None:intergenic | 15.0% |
| !!! | TTTGCATTTATAATCTATTT+TGG | + | chr1_1:13294590-13294609 | None:intergenic | 15.0% |
| !! | TAAAAATTAGTCAAAAACAT+TGG | - | chr1_1:13295544-13295563 | Msa0009100:intron | 15.0% |
| !! | AAAAATTAGTCAAAAACATT+GGG | - | chr1_1:13295545-13295564 | Msa0009100:intron | 15.0% |
| !! | AAGAAAATTTATTTCAAAAG+AGG | - | chr1_1:13295672-13295691 | Msa0009100:intron | 15.0% |
| !! | TATATTAACAAATAAGATGT+AGG | + | chr1_1:13296857-13296876 | None:intergenic | 15.0% |
| !! | AATATTTAACATATCAAAAG+TGG | + | chr1_1:13297813-13297832 | None:intergenic | 15.0% |
| !! | ATTCATAACTATATATTTGT+TGG | - | chr1_1:13298025-13298044 | Msa0009100:intron | 15.0% |
| !! | TTCATAACTATATATTTGTT+GGG | - | chr1_1:13298026-13298045 | Msa0009100:intron | 15.0% |
| !! | TTACATAATTAGTATTAGTA+AGG | - | chr1_1:13298285-13298304 | Msa0009100:intron | 15.0% |
| !! | ATACTCAAATTAGAAAAATT+TGG | - | chr1_1:13298324-13298343 | Msa0009100:intron | 15.0% |
| !!! | GATATTTTGTAATATCTTAT+AGG | + | chr1_1:13299471-13299490 | None:intergenic | 15.0% |
| !! | AATATAATATGATATCTTAC+AGG | + | chr1_1:13299499-13299518 | None:intergenic | 15.0% |
| !!! | CATTTTTGATTCAAAAGTTT+AGG | + | chr1_1:13293825-13293844 | None:intergenic | 20.0% |
| !!! | CTAAACTTTTGAATCAAAAA+TGG | - | chr1_1:13293823-13293842 | Msa0009100:three_prime_UTR | 20.0% |
| !! | GTAAATTGATCTTGTAAAAT+TGG | + | chr1_1:13294465-13294484 | None:intergenic | 20.0% |
| !!! | TTCAAGTTTTGTTTTTTTGA+GGG | + | chr1_1:13294654-13294673 | None:intergenic | 20.0% |
| !!! | AATGTAAAGTGATTTAAGTT+TGG | + | chr1_1:13294726-13294745 | None:intergenic | 20.0% |
| !! | CTTTACATTCAATTCTTATT+TGG | - | chr1_1:13294737-13294756 | Msa0009100:intron | 20.0% |
| !! | AATGTAAAATGGTTTATGTT+TGG | + | chr1_1:13294945-13294964 | None:intergenic | 20.0% |
| !! | TCAATTCAATTACAAGAATT+TGG | - | chr1_1:13294985-13295004 | Msa0009100:intron | 20.0% |
| !! | CAAATAATGAAAACTCAAAT+TGG | + | chr1_1:13295087-13295106 | None:intergenic | 20.0% |
| !!! | GTTTTCATTATTTGTTGTTT+TGG | - | chr1_1:13295093-13295112 | Msa0009100:intron | 20.0% |
| !! | TTGAAAAATAATTCTTCATC+AGG | + | chr1_1:13295652-13295671 | None:intergenic | 20.0% |
| !! | TATTATAAGCAAGGAAAAAA+TGG | + | chr1_1:13295710-13295729 | None:intergenic | 20.0% |
| !! | ATTCAATGATATTATAAGCA+AGG | + | chr1_1:13295719-13295738 | None:intergenic | 20.0% |
| !! | ATATACTACCTAAAAGAAAT+AGG | + | chr1_1:13295764-13295783 | None:intergenic | 20.0% |
| !!! | CTTTTGCCTATTTAATTTTT+TGG | - | chr1_1:13295864-13295883 | Msa0009100:intron | 20.0% |
| !! | TACAGTCCAAAAAATTAAAT+AGG | + | chr1_1:13295873-13295892 | None:intergenic | 20.0% |
| !!! | AATTAAGAGCATTTATCATA+AGG | + | chr1_1:13296182-13296201 | None:intergenic | 20.0% |
| !! | ATAGAACTTCAAAAATGATA+TGG | + | chr1_1:13296535-13296554 | None:intergenic | 20.0% |
| !!! | TTATTCTAAAGGAAAGAAAA+AGG | + | chr1_1:13297978-13297997 | None:intergenic | 20.0% |
| !! | ACAAATGCTTATTATTCTAA+AGG | + | chr1_1:13297989-13298008 | None:intergenic | 20.0% |
| !!! | TAGATAAACTGGTTAATTTT+TGG | - | chr1_1:13298527-13298546 | Msa0009100:intron | 20.0% |
| !!! | TGGTTAATTTTTGGTTTATT+TGG | - | chr1_1:13298536-13298555 | Msa0009100:intron | 20.0% |
| !!! | TTAATTTTTGGTTTATTTGG+TGG | - | chr1_1:13298539-13298558 | Msa0009100:intron | 20.0% |
| !!! | TAATTTTTGGTTTATTTGGT+GGG | - | chr1_1:13298540-13298559 | Msa0009100:intron | 20.0% |
| !! | AGAAAATAAGAACAAAACAT+GGG | + | chr1_1:13298667-13298686 | None:intergenic | 20.0% |
| !! | AAGAAAATAAGAACAAAACA+TGG | + | chr1_1:13298668-13298687 | None:intergenic | 20.0% |
| !! | TTAAGTAGACATAATATTAG+AGG | - | chr1_1:13298909-13298928 | Msa0009100:intron | 20.0% |
| !! | TAAGTAGACATAATATTAGA+GGG | - | chr1_1:13298910-13298929 | Msa0009100:intron | 20.0% |
| !!! | ATTTTTTAGGTGAAAAACTA+AGG | - | chr1_1:13299041-13299060 | Msa0009100:intron | 20.0% |
| !! | ATAGAAAATGATAAAACATC+AGG | + | chr1_1:13299225-13299244 | None:intergenic | 20.0% |
| !! | AAATATTAGAAAAACACTTG+AGG | + | chr1_1:13299396-13299415 | None:intergenic | 20.0% |
| !!! | AATATACAATCTTTTACTTC+TGG | - | chr1_1:13300312-13300331 | Msa0009100:intron | 20.0% |
| !! | CAGATATTTGAATTCACTTT+TGG | + | chr1_1:13294136-13294155 | None:intergenic | 25.0% |
| !!! | TATTGATTTTAGTGCATGTT+TGG | - | chr1_1:13294169-13294188 | Msa0009100:CDS | 25.0% |
| !!! | GTTATTGATTTTGACATGTT+TGG | - | chr1_1:13294221-13294240 | Msa0009100:intron | 25.0% |
| ! | CAAGTTATGATCAATTCTAT+AGG | + | chr1_1:13294625-13294644 | None:intergenic | 25.0% |
| !!! | TCAAGTTTTGTTTTTTTGAG+GGG | + | chr1_1:13294653-13294672 | None:intergenic | 25.0% |
| !!! | CTTCAAGTTTTGTTTTTTTG+AGG | + | chr1_1:13294655-13294674 | None:intergenic | 25.0% |
| ! | AATTTGAGCGTAAAAATCAT+TGG | + | chr1_1:13294907-13294926 | None:intergenic | 25.0% |
| ! | AACATGAGTTCAATGTAAAA+TGG | + | chr1_1:13294956-13294975 | None:intergenic | 25.0% |
| !!! | AAGTCAAATTATCTGGTTTT+TGG | - | chr1_1:13295016-13295035 | Msa0009100:intron | 25.0% |
| !!! | AGTCAAATTATCTGGTTTTT+GGG | - | chr1_1:13295017-13295036 | Msa0009100:intron | 25.0% |
| !! | AAAACTCAAATTGGTCTAAT+GGG | + | chr1_1:13295078-13295097 | None:intergenic | 25.0% |
| ! | ATGGTCATTTGTACAATTTA+TGG | - | chr1_1:13295270-13295289 | Msa0009100:CDS | 25.0% |
| ! | ATACCTTCAAGACAAAAAAT+CGG | + | chr1_1:13295407-13295426 | None:intergenic | 25.0% |
| !!! | AAACACTTTTTTTACAGGAA+GGG | - | chr1_1:13295568-13295587 | Msa0009100:intron | 25.0% |
| !!! | ATTTGTTTCTATGTTCGAAT+GGG | - | chr1_1:13295792-13295811 | Msa0009100:intron | 25.0% |
| ! | ATAAAAATAGAAGTTCTACG+AGG | + | chr1_1:13295967-13295986 | None:intergenic | 25.0% |
| ! | TTAACTTATTGGAAGAAACA+TGG | - | chr1_1:13296012-13296031 | Msa0009100:intron | 25.0% |
| !! | AGTTATTGAATCCAATTTTG+TGG | - | chr1_1:13296093-13296112 | Msa0009100:intron | 25.0% |
| !!! | AACATGTCACTTTATATTTC+AGG | + | chr1_1:13296654-13296673 | None:intergenic | 25.0% |
| !! | AAAGACTTTATATTTCAGGT+TGG | + | chr1_1:13296689-13296708 | None:intergenic | 25.0% |
| ! | AACCTGAAATATAAAGTCTT+TGG | - | chr1_1:13296688-13296707 | Msa0009100:intron | 25.0% |
| ! | AACCAAAGACTTTATATTTC+AGG | + | chr1_1:13296693-13296712 | None:intergenic | 25.0% |
| ! | CAAAAGAAATAATAAGACGT+GGG | + | chr1_1:13296826-13296845 | None:intergenic | 25.0% |
| !!! | CACGTCTTATTATTTCTTTT+GGG | - | chr1_1:13296825-13296844 | Msa0009100:CDS | 25.0% |
| !! | TCTCATTTTCTTTCTTTTGT+TGG | - | chr1_1:13297172-13297191 | Msa0009100:CDS | 25.0% |
| !! | CTCATTTTCTTTCTTTTGTT+GGG | - | chr1_1:13297173-13297192 | Msa0009100:CDS | 25.0% |
| !! | GTATGTTTTCCTCAATAATT+TGG | + | chr1_1:13297224-13297243 | None:intergenic | 25.0% |
| ! | TGATTCATCATATTCAAAAC+TGG | + | chr1_1:13297442-13297461 | None:intergenic | 25.0% |
| !!! | AAAATCTGGATTCTAGAATA+GGG | - | chr1_1:13297574-13297593 | Msa0009100:intron | 25.0% |
| !!! | ACTAAGTCTTGTTTTTATAG+AGG | - | chr1_1:13297871-13297890 | Msa0009100:intron | 25.0% |
| !!! | TAGTGTTTTGGTACAATAAA+TGG | - | chr1_1:13298067-13298086 | Msa0009100:intron | 25.0% |
| !!! | AGTGTTTTGGTACAATAAAT+GGG | - | chr1_1:13298068-13298087 | Msa0009100:intron | 25.0% |
| ! | AAGGTCATAAATTCAATTCA+TGG | - | chr1_1:13298128-13298147 | Msa0009100:intron | 25.0% |
| !! | TTCCGATTCATCTAATTTTT+AGG | - | chr1_1:13298488-13298507 | Msa0009100:intron | 25.0% |
| !! | TCCGATTCATCTAATTTTTA+GGG | - | chr1_1:13298489-13298508 | Msa0009100:intron | 25.0% |
| ! | TCCCTAAAAATTAGATGAAT+CGG | + | chr1_1:13298493-13298512 | None:intergenic | 25.0% |
| !!! | ATTCATCTAATTTTTAGGGA+AGG | - | chr1_1:13298493-13298512 | Msa0009100:intron | 25.0% |
| !!! | TTCATCTAATTTTTAGGGAA+GGG | - | chr1_1:13298494-13298513 | Msa0009100:intron | 25.0% |
| !!! | GGTTTTTTCAGAAATAGATT+TGG | - | chr1_1:13298589-13298608 | Msa0009100:intron | 25.0% |
| ! | AAAATAAGAACAAAACATGG+GGG | + | chr1_1:13298665-13298684 | None:intergenic | 25.0% |
| ! | GAAAATAAGAACAAAACATG+GGG | + | chr1_1:13298666-13298685 | None:intergenic | 25.0% |
| ! | ACATGATTGTATACTCAAAT+AGG | + | chr1_1:13298743-13298762 | None:intergenic | 25.0% |
| ! | TTTGAGTATACAATCATGTA+TGG | - | chr1_1:13298744-13298763 | Msa0009100:intron | 25.0% |
| ! | CTTAATATGACAATCTTTGT+GGG | + | chr1_1:13298875-13298894 | None:intergenic | 25.0% |
| ! | ACTTAATATGACAATCTTTG+TGG | + | chr1_1:13298876-13298895 | None:intergenic | 25.0% |
| ! | TGTAGATTATAATTGCAAAG+CGG | - | chr1_1:13299608-13299627 | Msa0009100:intron | 25.0% |
| !! | TACAAAATATAGTTGGTTTC+CGG | - | chr1_1:13299753-13299772 | Msa0009100:intron | 25.0% |
| !! | TACTATTTCTTGTTATGTGT+TGG | - | chr1_1:13299823-13299842 | Msa0009100:intron | 25.0% |
| !! | ACTATTTCTTGTTATGTGTT+GGG | - | chr1_1:13299824-13299843 | Msa0009100:intron | 25.0% |
| ! | CATTATAAAGAAGATCAAAG+TGG | + | chr1_1:13300039-13300058 | None:intergenic | 25.0% |
| ! | AGCATAAATGAAGGAAAAAT+GGG | + | chr1_1:13300080-13300099 | None:intergenic | 25.0% |
| ! | AAGCATAAATGAAGGAAAAA+TGG | + | chr1_1:13300081-13300100 | None:intergenic | 25.0% |
| !!! | ACTTTTTCCAGTTGTATAAA+AGG | + | chr1_1:13300575-13300594 | None:intergenic | 25.0% |
| !!! | TTATTTGGAGGTGTTATATT+TGG | - | chr1_1:13300733-13300752 | Msa0009100:five_prime_UTR | 25.0% |
| !!! | TATTTGGAGGTGTTATATTT+GGG | - | chr1_1:13300734-13300753 | Msa0009100:five_prime_UTR | 25.0% |
| !!! | TTGGCTTTTGAATGTTTATA+TGG | + | chr1_1:13300772-13300791 | None:intergenic | 25.0% |
| ! | TAATTGAGGATTACAAACAT+TGG | + | chr1_1:13300791-13300810 | None:intergenic | 25.0% |
| !! | GATTCAAAAGTTTAGGGTTT+TGG | + | chr1_1:13293818-13293837 | None:intergenic | 30.0% |
| TGAAAGAGGGAAAATTACAT+AGG | + | chr1_1:13294013-13294032 | None:intergenic | 30.0% | |
| GATAGAAACGAATTGAAAGA+GGG | + | chr1_1:13294026-13294045 | None:intergenic | 30.0% | |
| TGATAGAAACGAATTGAAAG+AGG | + | chr1_1:13294027-13294046 | None:intergenic | 30.0% | |
| !!! | TTTTTGTATGTTTGGTTCTG+CGG | + | chr1_1:13294811-13294830 | None:intergenic | 30.0% |
| ATCAAAATCAATTCCAACCT+AGG | + | chr1_1:13294842-13294861 | None:intergenic | 30.0% | |
| ATGCAAAAGCTACTATTCTT+AGG | + | chr1_1:13294884-13294903 | None:intergenic | 30.0% | |
| GCAATAGAAGTCAAATTATC+TGG | - | chr1_1:13295009-13295028 | Msa0009100:intron | 30.0% | |
| ! | GAAAACTCAAATTGGTCTAA+TGG | + | chr1_1:13295079-13295098 | None:intergenic | 30.0% |
| TGTTTGTAATACAATAGTCC+TGG | - | chr1_1:13295139-13295158 | Msa0009100:intron | 30.0% | |
| TAATACAATAGTCCTGGTTA+TGG | - | chr1_1:13295145-13295164 | Msa0009100:intron | 30.0% | |
| GTCATTTGTACAATTTATGG+TGG | - | chr1_1:13295273-13295292 | Msa0009100:CDS | 30.0% | |
| TTCAAGACAAAAAATCGGAA+GGG | + | chr1_1:13295402-13295421 | None:intergenic | 30.0% | |
| ! | GCTGTCAATTTCATTTTAAG+AGG | + | chr1_1:13295478-13295497 | None:intergenic | 30.0% |
| !!! | TTGGGAAACACTTTTTTTAC+AGG | - | chr1_1:13295563-13295582 | Msa0009100:intron | 30.0% |
| !!! | GAAACACTTTTTTTACAGGA+AGG | - | chr1_1:13295567-13295586 | Msa0009100:intron | 30.0% |
| AAGGGAAACATATAAGCATT+TGG | - | chr1_1:13295586-13295605 | Msa0009100:intron | 30.0% | |
| !!! | ACATATAAGCATTTGGCTTT+TGG | - | chr1_1:13295593-13295612 | Msa0009100:intron | 30.0% |
| !!! | CATATAAGCATTTGGCTTTT+GGG | - | chr1_1:13295594-13295613 | Msa0009100:intron | 30.0% |
| !!! | ATATAAGCATTTGGCTTTTG+GGG | - | chr1_1:13295595-13295614 | Msa0009100:intron | 30.0% |
| TTATTTCAAAAGAGGCTTCA+TGG | - | chr1_1:13295680-13295699 | Msa0009100:intron | 30.0% | |
| TCGAACATAGAAACAAATCA+GGG | + | chr1_1:13295790-13295809 | None:intergenic | 30.0% | |
| TTCGAACATAGAAACAAATC+AGG | + | chr1_1:13295791-13295810 | None:intergenic | 30.0% | |
| !! | GATTTGTTTCTATGTTCGAA+TGG | - | chr1_1:13295791-13295810 | Msa0009100:intron | 30.0% |
| TTGGATTCAATAACTCTCAA+GGG | + | chr1_1:13296088-13296107 | None:intergenic | 30.0% | |
| ATTGGATTCAATAACTCTCA+AGG | + | chr1_1:13296089-13296108 | None:intergenic | 30.0% | |
| AAAAACAACAAGAGACTCTA+TGG | + | chr1_1:13296213-13296232 | None:intergenic | 30.0% | |
| TTAATAGCACAATGATTGAG+AGG | + | chr1_1:13296352-13296371 | None:intergenic | 30.0% | |
| AATTAGCATTCCATAGAGAT+TGG | - | chr1_1:13296490-13296509 | Msa0009100:intron | 30.0% | |
| !! | TATTTCAGGTTGGATGTAAA+AGG | + | chr1_1:13296640-13296659 | None:intergenic | 30.0% |
| !! | TGTCACTTTATATTTCAGGT+TGG | + | chr1_1:13296650-13296669 | None:intergenic | 30.0% |
| !! | TATTTCAGGTTGGATGTAAA+GGG | + | chr1_1:13296640-13296659 | None:intergenic | 30.0% |
| !! | ATATTTCAGGTTGGATGTAA+AGG | + | chr1_1:13296641-13296660 | None:intergenic | 30.0% |
| ! | AGGTTTTGCAGAATTATATG+TGG | + | chr1_1:13296770-13296789 | None:intergenic | 30.0% |
| CCAAAAGAAATAATAAGACG+TGG | + | chr1_1:13296827-13296846 | None:intergenic | 30.0% | |
| !! | CCACGTCTTATTATTTCTTT+TGG | - | chr1_1:13296824-13296843 | Msa0009100:CDS | 30.0% |
| ! | CTGATTTTCATATTCAGCAT+TGG | - | chr1_1:13296882-13296901 | Msa0009100:CDS | 30.0% |
| !! | ATTTTCATATTCAGCATTGG+TGG | - | chr1_1:13296885-13296904 | Msa0009100:CDS | 30.0% |
| !!! | TTTTCATATTCAGCATTGGT+GGG | - | chr1_1:13296886-13296905 | Msa0009100:CDS | 30.0% |
| ! | TCTTCACATGCATTTTATGT+TGG | - | chr1_1:13297129-13297148 | Msa0009100:CDS | 30.0% |
| ATAATTTGGATCTCTCCATA+AGG | + | chr1_1:13297210-13297229 | None:intergenic | 30.0% | |
| TTGCAAGGAAGATTACTTAA+GGG | + | chr1_1:13297285-13297304 | None:intergenic | 30.0% | |
| !! | GATTTTCTGCATCTTTTTCA+TGG | + | chr1_1:13297560-13297579 | None:intergenic | 30.0% |
| TGAAAAAGATGCAGAAAATC+TGG | - | chr1_1:13297560-13297579 | Msa0009100:intron | 30.0% | |
| !! | GAAAATCTGGATTCTAGAAT+AGG | - | chr1_1:13297573-13297592 | Msa0009100:intron | 30.0% |
| !! | CTTAATCTAGCTTAGTGTTT+TGG | - | chr1_1:13298055-13298074 | Msa0009100:intron | 30.0% |
| AATTAGTATTAGTAAGGTCC+AGG | - | chr1_1:13298291-13298310 | Msa0009100:intron | 30.0% | |
| TTGAGTATAGATATTGAACC+TGG | + | chr1_1:13298312-13298331 | None:intergenic | 30.0% | |
| CTAATGTAGTAGTGAACAAT+AGG | + | chr1_1:13298351-13298370 | None:intergenic | 30.0% | |
| ! | TGGGATCTTATTCCAAATTT+TGG | - | chr1_1:13298559-13298578 | Msa0009100:intron | 30.0% |
| !!! | TATTCCAAATTTTGGTTCTG+AGG | - | chr1_1:13298567-13298586 | Msa0009100:intron | 30.0% |
| !!! | ATTCCAAATTTTGGTTCTGA+GGG | - | chr1_1:13298568-13298587 | Msa0009100:intron | 30.0% |
| AAATAAGAACAAAACATGGG+GGG | + | chr1_1:13298664-13298683 | None:intergenic | 30.0% | |
| ! | TGTAGATAATTTTGTGGTTG+TGG | - | chr1_1:13298712-13298731 | Msa0009100:intron | 30.0% |
| TGATTGTATACTCAAATAGG+TGG | + | chr1_1:13298740-13298759 | None:intergenic | 30.0% | |
| ! | ACTAAAAGTGACACTCTTTT+TGG | - | chr1_1:13298970-13298989 | Msa0009100:intron | 30.0% |
| ! | CTAAAAGTGACACTCTTTTT+GGG | - | chr1_1:13298971-13298990 | Msa0009100:intron | 30.0% |
| TGCGAATGTGACAATTATTA+TGG | - | chr1_1:13299006-13299025 | Msa0009100:intron | 30.0% | |
| GCGAATGTGACAATTATTAT+GGG | - | chr1_1:13299007-13299026 | Msa0009100:intron | 30.0% | |
| ! | TTCAGAAACAGGTATTTTAC+TGG | + | chr1_1:13299250-13299269 | None:intergenic | 30.0% |
| TTAGAAAAACACTTGAGGAT+TGG | + | chr1_1:13299391-13299410 | None:intergenic | 30.0% | |
| ATAGGATATTCTAGCGTAAT+AGG | - | chr1_1:13299418-13299437 | Msa0009100:intron | 30.0% | |
| ! | CAACTATATTTTGTAAGTGC+TGG | + | chr1_1:13299748-13299767 | None:intergenic | 30.0% |
| CAGCACTTACAAAATATAGT+TGG | - | chr1_1:13299746-13299765 | Msa0009100:intron | 30.0% | |
| ! | ACAAAATATAGTTGGTTTCC+GGG | - | chr1_1:13299754-13299773 | Msa0009100:intron | 30.0% |
| ! | CTATTTCTTGTTATGTGTTG+GGG | - | chr1_1:13299825-13299844 | Msa0009100:intron | 30.0% |
| ! | TATAACTGGTAGTGATAACA+TGG | + | chr1_1:13299861-13299880 | None:intergenic | 30.0% |
| GTATAAGGTTATCGTTTATG+TGG | + | chr1_1:13299894-13299913 | None:intergenic | 30.0% | |
| GTAGTTCAAAGCATAAATGA+AGG | + | chr1_1:13300089-13300108 | None:intergenic | 30.0% | |
| ! | AACTGAAACCTAAGTCATTT+TGG | - | chr1_1:13300412-13300431 | Msa0009100:intron | 30.0% |
| !! | ACTGAAACCTAAGTCATTTT+GGG | - | chr1_1:13300413-13300432 | Msa0009100:intron | 30.0% |
| TTCATGCTGCAATATGAATA+TGG | + | chr1_1:13300518-13300537 | None:intergenic | 30.0% | |
| ! | AGCATGAATATTGATGATAC+AGG | - | chr1_1:13300530-13300549 | Msa0009100:CDS | 30.0% |
| TTCTGCAATTGTAATTGAGT+TGG | - | chr1_1:13300644-13300663 | Msa0009100:CDS | 30.0% | |
| TACAAATGTAAGGACTAGAT+TGG | - | chr1_1:13300698-13300717 | Msa0009100:exon | 30.0% | |
| ACAAATGTAAGGACTAGATT+GGG | - | chr1_1:13300699-13300718 | Msa0009100:exon | 30.0% | |
| ! | GTTGTTGTTGTTGTCATCAT+CGG | + | chr1_1:13293975-13293994 | None:intergenic | 35.0% |
| GACTTGAAGCTAGAAATTTG+TGG | - | chr1_1:13294282-13294301 | Msa0009100:intron | 35.0% | |
| AGTTGAAGGTAAAGTGAGTT+AGG | + | chr1_1:13294427-13294446 | None:intergenic | 35.0% | |
| TCTCGCTAAAAGTTAGTTGA+AGG | + | chr1_1:13294441-13294460 | None:intergenic | 35.0% | |
| ! | TGTATGTTTGCTTCCACTTT+TGG | - | chr1_1:13294559-13294578 | Msa0009100:intron | 35.0% |
| !!! | TATTTTGGCTTCTCCAAAAG+TGG | + | chr1_1:13294575-13294594 | None:intergenic | 35.0% |
| GCAGAACCAAACATACAAAA+AGG | - | chr1_1:13294810-13294829 | Msa0009100:CDS | 35.0% | |
| GAACCAAACATACAAAAAGG+TGG | - | chr1_1:13294813-13294832 | Msa0009100:CDS | 35.0% | |
| ! | ACTCCACCTTTTTGTATGTT+TGG | + | chr1_1:13294819-13294838 | None:intergenic | 35.0% |
| TATTGTAAGTGAATTCACCC+GGG | + | chr1_1:13295186-13295205 | None:intergenic | 35.0% | |
| GTATTGTAAGTGAATTCACC+CGG | + | chr1_1:13295187-13295206 | None:intergenic | 35.0% | |
| AGCATCCTTACATACATATC+TGG | - | chr1_1:13295213-13295232 | Msa0009100:CDS | 35.0% | |
| GCATCCTTACATACATATCT+GGG | - | chr1_1:13295214-13295233 | Msa0009100:CDS | 35.0% | |
| TTGTTGTACTTCGTCGTTTA+TGG | - | chr1_1:13295251-13295270 | Msa0009100:CDS | 35.0% | |
| !! | AATTTATGGTGGTTTCTAGC+TGG | - | chr1_1:13295284-13295303 | Msa0009100:CDS | 35.0% |
| CTTCAAGACAAAAAATCGGA+AGG | + | chr1_1:13295403-13295422 | None:intergenic | 35.0% | |
| !!! | CTTCCGATTTTTTGTCTTGA+AGG | - | chr1_1:13295401-13295420 | Msa0009100:intron | 35.0% |
| ATCCTTCATGGATTTGAGTA+TGG | - | chr1_1:13295434-13295453 | Msa0009100:intron | 35.0% | |
| TCTTCATCAGGCAACTAATA+TGG | + | chr1_1:13295640-13295659 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTTTGCTTTTCCCC+AGG | - | chr1_1:13295738-13295757 | Msa0009100:intron | 35.0% |
| TACCTAAAAGAAATAGGCCT+GGG | + | chr1_1:13295758-13295777 | None:intergenic | 35.0% | |
| CGAACATAGAAACAAATCAG+GGG | + | chr1_1:13295789-13295808 | None:intergenic | 35.0% | |
| AATGTGGTGCAGAATGAAAA+AGG | + | chr1_1:13295836-13295855 | None:intergenic | 35.0% | |
| GCATGCAAGTGTTAACTTAT+TGG | - | chr1_1:13296001-13296020 | Msa0009100:intron | 35.0% | |
| GACTAATCCTTGCAATATTC+AGG | - | chr1_1:13296034-13296053 | Msa0009100:intron | 35.0% | |
| ATATTACCTCGAAAAGTCGT+TGG | - | chr1_1:13296401-13296420 | Msa0009100:intron | 35.0% | |
| ! | AAAAGTCGTTGGTGTTTGTT+AGG | - | chr1_1:13296412-13296431 | Msa0009100:intron | 35.0% |
| !! | TTTCATATTCAGCATTGGTG+GGG | - | chr1_1:13296887-13296906 | Msa0009100:CDS | 35.0% |
| AACTTACAGATTCGACAGTA+CGG | - | chr1_1:13296969-13296988 | Msa0009100:CDS | 35.0% | |
| TGGAGAGATCCAAATTATTG+AGG | - | chr1_1:13297212-13297231 | Msa0009100:CDS | 35.0% | |
| !!! | AATTTTCCAAAAGCATCCCT+TGG | + | chr1_1:13297258-13297277 | None:intergenic | 35.0% |
| GTTGCAAGGAAGATTACTTA+AGG | + | chr1_1:13297286-13297305 | None:intergenic | 35.0% | |
| CCATCAACAGAATACTTTGA+AGG | + | chr1_1:13297324-13297343 | None:intergenic | 35.0% | |
| ! | CCTTCAAAGTATTCTGTTGA+TGG | - | chr1_1:13297321-13297340 | Msa0009100:intron | 35.0% |
| ! | AAAGTATTCTGTTGATGGAC+AGG | - | chr1_1:13297326-13297345 | Msa0009100:intron | 35.0% |
| TGTTTCACTTTCCTCGTTTA+AGG | + | chr1_1:13297355-13297374 | None:intergenic | 35.0% | |
| TGGAACAAATGAGTGATTGA+TGG | + | chr1_1:13297422-13297441 | None:intergenic | 35.0% | |
| TATGATGAATCAGCAAGTAG+TGG | - | chr1_1:13297450-13297469 | Msa0009100:intron | 35.0% | |
| ATTCACATATGAGTCAGATC+AGG | - | chr1_1:13297482-13297501 | Msa0009100:CDS | 35.0% | |
| AAATTCTATGTGAGGAGTAG+CGG | + | chr1_1:13297668-13297687 | None:intergenic | 35.0% | |
| TGCTCTTGAAATTCTATGTG+AGG | + | chr1_1:13297676-13297695 | None:intergenic | 35.0% | |
| ! | AAGCTCTGATCAGAAAACTA+CGG | + | chr1_1:13297925-13297944 | None:intergenic | 35.0% |
| CCATATCATTTGCAACAGAT+TGG | + | chr1_1:13298156-13298175 | None:intergenic | 35.0% | |
| CCAATCTGTTGCAAATGATA+TGG | - | chr1_1:13298153-13298172 | Msa0009100:intron | 35.0% | |
| !! | ATTGCCCTTTTTAGTGCTTT+GGG | - | chr1_1:13298257-13298276 | Msa0009100:intron | 35.0% |
| ! | TTGTCCCAAAGCACTAAAAA+GGG | + | chr1_1:13298264-13298283 | None:intergenic | 35.0% |
| ! | ATTGTCCCAAAGCACTAAAA+AGG | + | chr1_1:13298265-13298284 | None:intergenic | 35.0% |
| !! | ATTGTGATGGATATAGAGAG+AGG | + | chr1_1:13298432-13298451 | None:intergenic | 35.0% |
| GTTGCCTTTCTTTAAACTCT+GGG | + | chr1_1:13298459-13298478 | None:intergenic | 35.0% | |
| GAACACTTGTGTAGATAAAC+TGG | - | chr1_1:13298516-13298535 | Msa0009100:intron | 35.0% | |
| AAACCCTCAGAACCAAAATT+TGG | + | chr1_1:13298574-13298593 | None:intergenic | 35.0% | |
| ! | AGATTTGGTATGCCTTTCTT+CGG | - | chr1_1:13298604-13298623 | Msa0009100:intron | 35.0% |
| AATAAGAACAAAACATGGGG+GGG | + | chr1_1:13298663-13298682 | None:intergenic | 35.0% | |
| ! | GCGTGTTGTAGATAATTTTG+TGG | - | chr1_1:13298706-13298725 | Msa0009100:intron | 35.0% |
| TTATGTGACATGATCCTTCA+AGG | - | chr1_1:13298782-13298801 | Msa0009100:intron | 35.0% | |
| TATGTGACATGATCCTTCAA+GGG | - | chr1_1:13298783-13298802 | Msa0009100:intron | 35.0% | |
| TCACCTAAAAAATACTCCCT+CGG | + | chr1_1:13299034-13299053 | None:intergenic | 35.0% | |
| GTTCATGATCTGTAGATATG+TGG | - | chr1_1:13299154-13299173 | Msa0009100:CDS | 35.0% | |
| !! | TACCTGTTTCTGAATCTACA+AGG | - | chr1_1:13299256-13299275 | Msa0009100:intron | 35.0% |
| GATCTCATATAGATTGCGTA+GGG | - | chr1_1:13299302-13299321 | Msa0009100:intron | 35.0% | |
| AATTCGATGTAAAATCTGCC+AGG | - | chr1_1:13299353-13299372 | Msa0009100:CDS | 35.0% | |
| TTTCCAACTTTCATCAAGTG+CGG | - | chr1_1:13299551-13299570 | Msa0009100:intron | 35.0% | |
| TGAGATAACGACTTTGTACA+AGG | - | chr1_1:13299699-13299718 | Msa0009100:intron | 35.0% | |
| !! | CAAATGGATTAGCTCTAACT+GGG | - | chr1_1:13299722-13299741 | Msa0009100:intron | 35.0% |
| ! | CAAAATATAGTTGGTTTCCG+GGG | - | chr1_1:13299755-13299774 | Msa0009100:intron | 35.0% |
| CATCCACCAGAAATGAAAAT+GGG | + | chr1_1:13299791-13299810 | None:intergenic | 35.0% | |
| GTGGATGATACAGTTATAAC+TGG | + | chr1_1:13299875-13299894 | None:intergenic | 35.0% | |
| TGAGGTTCAACTTAATTCTG+AGG | + | chr1_1:13300117-13300136 | None:intergenic | 35.0% | |
| ! | TTGTAAGGTGGTGAATTTTG+AGG | + | chr1_1:13300135-13300154 | None:intergenic | 35.0% |
| CATAATAAGAGGTTGTAAGG+TGG | + | chr1_1:13300147-13300166 | None:intergenic | 35.0% | |
| GTGCATAATAAGAGGTTGTA+AGG | + | chr1_1:13300150-13300169 | None:intergenic | 35.0% | |
| CAACTTATATTGCAGAGCTT+TGG | + | chr1_1:13300190-13300209 | None:intergenic | 35.0% | |
| TCACAAGGATCAAATATCAC+TGG | + | chr1_1:13300220-13300239 | None:intergenic | 35.0% | |
| CTAAATCTATCAGGATCACA+AGG | + | chr1_1:13300235-13300254 | None:intergenic | 35.0% | |
| GTTGAGAGACTAAATCTATC+AGG | + | chr1_1:13300244-13300263 | None:intergenic | 35.0% | |
| ! | TACAATCTTTTACTTCTGGC+AGG | - | chr1_1:13300316-13300335 | Msa0009100:intron | 35.0% |
| ! | AGGTTTCAGTTTTCTGTTTG+TGG | + | chr1_1:13300403-13300422 | None:intergenic | 35.0% |
| !! | CTGAAACCTAAGTCATTTTG+GGG | - | chr1_1:13300414-13300433 | Msa0009100:intron | 35.0% |
| TTGCAGTACTAGTGAACATT+TGG | - | chr1_1:13300488-13300507 | Msa0009100:intron | 35.0% | |
| ! | ACTCTTGCCTTTTATACAAC+TGG | - | chr1_1:13300565-13300584 | Msa0009100:CDS | 35.0% |
| AAGTATAAAGTTCCAGACGA+TGG | - | chr1_1:13300591-13300610 | Msa0009100:CDS | 35.0% | |
| !! | CATTTGTATGCTGGTTTCAA+CGG | + | chr1_1:13300686-13300705 | None:intergenic | 35.0% |
| GAAACCAGCATACAAATGTA+AGG | - | chr1_1:13300688-13300707 | Msa0009100:exon | 35.0% | |
| TAGTCCTTACATTTGTATGC+TGG | + | chr1_1:13300695-13300714 | None:intergenic | 35.0% | |
| TGGGTTTATCCATGGTTATT+TGG | - | chr1_1:13300718-13300737 | Msa0009100:five_prime_UTR | 35.0% | |
| GTTTATCCATGGTTATTTGG+AGG | - | chr1_1:13300721-13300740 | Msa0009100:five_prime_UTR | 35.0% | |
| ATAACACCTCCAAATAACCA+TGG | + | chr1_1:13300730-13300749 | None:intergenic | 35.0% | |
| ! | AGGTGTTATATTTGGGTGTT+GGG | - | chr1_1:13300741-13300760 | Msa0009100:five_prime_UTR | 35.0% |
| !!! | GGTTTTGGTTTTGTGTGTGA+AGG | + | chr1_1:13293803-13293822 | None:intergenic | 40.0% |
| ! | TGCATGTTTGGTTCCACTAT+GGG | - | chr1_1:13294181-13294200 | Msa0009100:CDS | 40.0% |
| CTAGCTTCAAGTCATACTCT+TGG | + | chr1_1:13294275-13294294 | None:intergenic | 40.0% | |
| ATACAAAAAGGTGGAGTCCT+AGG | - | chr1_1:13294822-13294841 | Msa0009100:CDS | 40.0% | |
| TCCTTACATACATATCTGGG+CGG | - | chr1_1:13295217-13295236 | Msa0009100:CDS | 40.0% | |
| ATGTTGAAGACACACATCAC+AGG | - | chr1_1:13295345-13295364 | Msa0009100:CDS | 40.0% | |
| ! | ACATCACAGGTCAACGTTTT+TGG | - | chr1_1:13295358-13295377 | Msa0009100:intron | 40.0% |
| CACCATACTCAAATCCATGA+AGG | + | chr1_1:13295439-13295458 | None:intergenic | 40.0% | |
| TGGATTTGAGTATGGTGCTT+TGG | - | chr1_1:13295442-13295461 | Msa0009100:intron | 40.0% | |
| AACTGCATGTCTGTTAAAGC+AGG | + | chr1_1:13295525-13295544 | None:intergenic | 40.0% | |
| TTTCAAAAGAGGCTTCATGG+TGG | - | chr1_1:13295683-13295702 | Msa0009100:intron | 40.0% | |
| ACCTAAAAGAAATAGGCCTG+GGG | + | chr1_1:13295757-13295776 | None:intergenic | 40.0% | |
| CTACCTAAAAGAAATAGGCC+TGG | + | chr1_1:13295759-13295778 | None:intergenic | 40.0% | |
| !! | TGTTCGAATGGGATTTGTTG+TGG | - | chr1_1:13295803-13295822 | Msa0009100:intron | 40.0% |
| TTCATTCTGCACCACATTCT+TGG | - | chr1_1:13295838-13295857 | Msa0009100:intron | 40.0% | |
| TCATTCTGCACCACATTCTT+GGG | - | chr1_1:13295839-13295858 | Msa0009100:intron | 40.0% | |
| CTTGCATGCATAACATGATG+AGG | + | chr1_1:13295990-13296009 | None:intergenic | 40.0% | |
| CACAACTCCTGAATATTGCA+AGG | + | chr1_1:13296044-13296063 | None:intergenic | 40.0% | |
| ! | GGTTTTCATCCTACGATTTG+CGG | + | chr1_1:13296299-13296318 | None:intergenic | 40.0% |
| CATAGTCATGCCAATCTCTA+TGG | + | chr1_1:13296503-13296522 | None:intergenic | 40.0% | |
| CATAGAGATTGGCATGACTA+TGG | - | chr1_1:13296501-13296520 | Msa0009100:intron | 40.0% | |
| AATTCTGCAAAACCTGTCTG+AGG | - | chr1_1:13296775-13296794 | Msa0009100:intron | 40.0% | |
| ACTTACAGATTCGACAGTAC+GGG | - | chr1_1:13296970-13296989 | Msa0009100:CDS | 40.0% | |
| AACAACGCTTTCGCTTAAGA+CGG | - | chr1_1:13297033-13297052 | Msa0009100:CDS | 40.0% | |
| !! | TGGGATGTTTCTTAGCCTTA+TGG | - | chr1_1:13297192-13297211 | Msa0009100:CDS | 40.0% |
| ! | ATACTTTGAAGGCAACACAC+TGG | + | chr1_1:13297313-13297332 | None:intergenic | 40.0% |
| GGTGTCTGGTGTATTTAGAT+TGG | + | chr1_1:13297517-13297536 | None:intergenic | 40.0% | |
| ! | TTTTCATGGTCAGGTAGCAA+TGG | + | chr1_1:13297546-13297565 | None:intergenic | 40.0% |
| !! | TCTGCATCTTTTTCATGGTC+AGG | + | chr1_1:13297555-13297574 | None:intergenic | 40.0% |
| AAACAATCCTCCATCAGAGA+AGG | - | chr1_1:13297615-13297634 | Msa0009100:intron | 40.0% | |
| AACAATCCTCCATCAGAGAA+GGG | - | chr1_1:13297616-13297635 | Msa0009100:intron | 40.0% | |
| !! | ATTTCAAGAGCATTCTTGCC+TGG | - | chr1_1:13297684-13297703 | Msa0009100:intron | 40.0% |
| AACATACGATATACCCAACC+AGG | + | chr1_1:13297705-13297724 | None:intergenic | 40.0% | |
| CTCCTATTTGCTTGCACAAA+GGG | - | chr1_1:13297728-13297747 | Msa0009100:intron | 40.0% | |
| CTGTTGCAAATGATATGGCT+TGG | - | chr1_1:13298158-13298177 | Msa0009100:intron | 40.0% | |
| AAGCACTAAAAAGGGCAATC+TGG | + | chr1_1:13298256-13298275 | None:intergenic | 40.0% | |
| !! | GATTGCCCTTTTTAGTGCTT+TGG | - | chr1_1:13298256-13298275 | Msa0009100:intron | 40.0% |
| AGCACCCAGAGTTTAAAGAA+AGG | - | chr1_1:13298452-13298471 | Msa0009100:CDS | 40.0% | |
| GGTTGCCTTTCTTTAAACTC+TGG | + | chr1_1:13298460-13298479 | None:intergenic | 40.0% | |
| ! | GATTTGGTATGCCTTTCTTC+GGG | - | chr1_1:13298605-13298624 | Msa0009100:intron | 40.0% |
| AACTGTCTAAACCCGAAGAA+AGG | + | chr1_1:13298619-13298638 | None:intergenic | 40.0% | |
| ATGTGACATGATCCTTCAAG+GGG | - | chr1_1:13298784-13298803 | Msa0009100:intron | 40.0% | |
| TGACAATTATTATGGGTCCG+AGG | - | chr1_1:13299014-13299033 | Msa0009100:intron | 40.0% | |
| GACAATTATTATGGGTCCGA+GGG | - | chr1_1:13299015-13299034 | Msa0009100:intron | 40.0% | |
| GATATGTGGAAGCAAATCGT+TGG | - | chr1_1:13299168-13299187 | Msa0009100:CDS | 40.0% | |
| !! | TTAACAAGAGCATCCATGCT+TGG | + | chr1_1:13299198-13299217 | None:intergenic | 40.0% |
| TGCCTTGTAGATTCAGAAAC+AGG | + | chr1_1:13299261-13299280 | None:intergenic | 40.0% | |
| ! | TGTTTCTGAATCTACAAGGC+AGG | - | chr1_1:13299260-13299279 | Msa0009100:intron | 40.0% |
| !! | AGGAGCTTTTGGAGATTGAT+GGG | - | chr1_1:13299280-13299299 | Msa0009100:intron | 40.0% |
| GGATCTCATATAGATTGCGT+AGG | - | chr1_1:13299301-13299320 | Msa0009100:intron | 40.0% | |
| TATCCGCACTTGATGAAAGT+TGG | + | chr1_1:13299557-13299576 | None:intergenic | 40.0% | |
| CATTTACATACGCACCAACA+GGG | + | chr1_1:13299663-13299682 | None:intergenic | 40.0% | |
| ACGACTTTGTACAAGGCAAA+TGG | - | chr1_1:13299706-13299725 | Msa0009100:intron | 40.0% | |
| !! | GCAAATGGATTAGCTCTAAC+TGG | - | chr1_1:13299721-13299740 | Msa0009100:intron | 40.0% |
| ! | TGTCTGCCCATTTTCATTTC+TGG | - | chr1_1:13299782-13299801 | Msa0009100:intron | 40.0% |
| GCATCCACCAGAAATGAAAA+TGG | + | chr1_1:13299792-13299811 | None:intergenic | 40.0% | |
| ! | TGGTAGTGATAACATGGCAA+TGG | + | chr1_1:13299855-13299874 | None:intergenic | 40.0% |
| ! | GGTTCAACTTAATTCTGAGG+TGG | + | chr1_1:13300114-13300133 | None:intergenic | 40.0% |
| GAAGGACTGTGCATAATAAG+AGG | + | chr1_1:13300158-13300177 | None:intergenic | 40.0% | |
| !! | GAGCTTTGGAGTTTGTATGA+AGG | + | chr1_1:13300176-13300195 | None:intergenic | 40.0% |
| TGTAAAAAGCCACCCCATAT+GGG | + | chr1_1:13300379-13300398 | None:intergenic | 40.0% | |
| CGTATACCCCAAAATGACTT+AGG | + | chr1_1:13300423-13300442 | None:intergenic | 40.0% | |
| ! | TCTTAGATTTTGCCATCGTC+TGG | + | chr1_1:13300606-13300625 | None:intergenic | 40.0% |
| GACTAGATTGGGTTTATCCA+TGG | - | chr1_1:13300710-13300729 | Msa0009100:five_prime_UTR | 40.0% | |
| ! | GAGGTGTTATATTTGGGTGT+TGG | - | chr1_1:13300740-13300759 | Msa0009100:five_prime_UTR | 40.0% |
| ! | GCTGGAGAATTTGCTCGATT+TGG | + | chr1_1:13293901-13293920 | None:intergenic | 45.0% |
| TGTCATCATCGGAAGAATCG+TGG | + | chr1_1:13293964-13293983 | None:intergenic | 45.0% | |
| ! | GTGCATGTTTGGTTCCACTA+TGG | - | chr1_1:13294180-13294199 | Msa0009100:CDS | 45.0% |
| ! | ATGTTTGGTTCCACTATGGG+AGG | - | chr1_1:13294184-13294203 | Msa0009100:CDS | 45.0% |
| !!! | AATTTTGGCTCCTCCCATAG+TGG | + | chr1_1:13294197-13294216 | None:intergenic | 45.0% |
| AAAAAGGTGGAGTCCTAGGT+TGG | - | chr1_1:13294826-13294845 | Msa0009100:CDS | 45.0% | |
| ACCGCCCAGATATGTATGTA+AGG | + | chr1_1:13295221-13295240 | None:intergenic | 45.0% | |
| !! | CACAGGTCAACGTTTTTGGA+TGG | - | chr1_1:13295362-13295381 | Msa0009100:intron | 45.0% |
| !! | AGGTCAACGTTTTTGGATGG+TGG | - | chr1_1:13295365-13295384 | Msa0009100:intron | 45.0% |
| !! | GGTCAACGTTTTTGGATGGT+GGG | - | chr1_1:13295366-13295385 | Msa0009100:intron | 45.0% |
| GGTATCTGTGTCATCCTTCA+TGG | - | chr1_1:13295422-13295441 | Msa0009100:intron | 45.0% | |
| !! | TCCCCAGGCCTATTTCTTTT+AGG | - | chr1_1:13295753-13295772 | Msa0009100:intron | 45.0% |
| CTCAACAGCAGCCACAAAAT+TGG | + | chr1_1:13296107-13296126 | None:intergenic | 45.0% | |
| GTTGACGTTCCTTACACCAT+TGG | - | chr1_1:13296142-13296161 | Msa0009100:intron | 45.0% | |
| ! | GATCTGGAAAGAGCATGTAC+AGG | + | chr1_1:13296260-13296279 | None:intergenic | 45.0% |
| TATCGCTGAAAACTCGGATC+TGG | + | chr1_1:13296276-13296295 | None:intergenic | 45.0% | |
| TTGCGGTATCGCTGAAAACT+CGG | + | chr1_1:13296282-13296301 | None:intergenic | 45.0% | |
| AGGATGAAAACCGCAAGCAT+TGG | - | chr1_1:13296307-13296326 | Msa0009100:intron | 45.0% | |
| GGATGAAAACCGCAAGCATT+GGG | - | chr1_1:13296308-13296327 | Msa0009100:intron | 45.0% | |
| ! | CAAACACCAACGACTTTTCG+AGG | + | chr1_1:13296410-13296429 | None:intergenic | 45.0% |
| CATTCAACGAACCATCCTCT+AGG | + | chr1_1:13296998-13297017 | None:intergenic | 45.0% | |
| AGAGGATGGTTCGTTGAATG+TGG | - | chr1_1:13296998-13297017 | Msa0009100:CDS | 45.0% | |
| ! | AGCAATGGTGTTAAGGTGTC+TGG | + | chr1_1:13297531-13297550 | None:intergenic | 45.0% |
| ! | GTCAGGTAGCAATGGTGTTA+AGG | + | chr1_1:13297538-13297557 | None:intergenic | 45.0% |
| ! | GGAGGATTGTTTTCCAGAAG+AGG | + | chr1_1:13297607-13297626 | None:intergenic | 45.0% |
| ATTAAGCCCTTCTCTGATGG+AGG | + | chr1_1:13297625-13297644 | None:intergenic | 45.0% | |
| CCAATTAAGCCCTTCTCTGA+TGG | + | chr1_1:13297628-13297647 | None:intergenic | 45.0% | |
| CCATCAGAGAAGGGCTTAAT+TGG | - | chr1_1:13297625-13297644 | Msa0009100:intron | 45.0% | |
| !! | AAGAGCATTCTTGCCTGGTT+GGG | - | chr1_1:13297689-13297708 | Msa0009100:intron | 45.0% |
| AGCCCTTTGTGCAAGCAAAT+AGG | + | chr1_1:13297733-13297752 | None:intergenic | 45.0% | |
| GCAATGTGCGCAACATTTGA+GGG | + | chr1_1:13297903-13297922 | None:intergenic | 45.0% | |
| ! | TGATCAGAGCTTTCGAGTGT+AGG | - | chr1_1:13297933-13297952 | Msa0009100:intron | 45.0% |
| GGTACAATAAATGGGAGCCT+TGG | - | chr1_1:13298076-13298095 | Msa0009100:intron | 45.0% | |
| AAATGGGAGCCTTGGTACAA+TGG | - | chr1_1:13298084-13298103 | Msa0009100:intron | 45.0% | |
| ! | TGATATGGCTTGGCTACAGT+AGG | - | chr1_1:13298168-13298187 | Msa0009100:intron | 45.0% |
| GGCTACAGTAGGTCTATAAC+AGG | - | chr1_1:13298179-13298198 | Msa0009100:intron | 45.0% | |
| !! | AACTCTGGGTGCTATTGTGA+TGG | + | chr1_1:13298445-13298464 | None:intergenic | 45.0% |
| TAGATGAATCGGAATGCGCT+CGG | + | chr1_1:13298482-13298501 | None:intergenic | 45.0% | |
| GGGCATAGAGACTAAACACA+TGG | + | chr1_1:13298643-13298662 | None:intergenic | 45.0% | |
| TGTGACATGATCCTTCAAGG+GGG | - | chr1_1:13298785-13298804 | Msa0009100:intron | 45.0% | |
| !!! | GGTCCGAGGGAGTATTTTTT+AGG | - | chr1_1:13299028-13299047 | Msa0009100:intron | 45.0% |
| ! | ATCTACAAGGCAGGAGCTTT+TGG | - | chr1_1:13299269-13299288 | Msa0009100:intron | 45.0% |
| !! | CAGGAGCTTTTGGAGATTGA+TGG | - | chr1_1:13299279-13299298 | Msa0009100:intron | 45.0% |
| !! | GATTGGTGACGATGATTACC+TGG | + | chr1_1:13299374-13299393 | None:intergenic | 45.0% |
| ! | ATGCTGGTGATGTCTAGTGA+AGG | - | chr1_1:13299637-13299656 | Msa0009100:intron | 45.0% |
| GCATTTACATACGCACCAAC+AGG | + | chr1_1:13299664-13299683 | None:intergenic | 45.0% | |
| GGTGCGTATGTAAATGCAAC+TGG | - | chr1_1:13299667-13299686 | Msa0009100:intron | 45.0% | |
| !! | CTGCCCATTTTCATTTCTGG+TGG | - | chr1_1:13299785-13299804 | Msa0009100:intron | 45.0% |
| AAGCAGTGGTACACATGTCA+TGG | + | chr1_1:13299976-13299995 | None:intergenic | 45.0% | |
| CCATGTGTACAATGAAGCAG+TGG | + | chr1_1:13299990-13300009 | None:intergenic | 45.0% | |
| CCACTGCTTCATTGTACACA+TGG | - | chr1_1:13299987-13300006 | Msa0009100:intron | 45.0% | |
| TCTCTCAACTATCACCTTCG+AGG | - | chr1_1:13300255-13300274 | Msa0009100:intron | 45.0% | |
| ACAGCATAGAAGATCCTCGA+AGG | + | chr1_1:13300272-13300291 | None:intergenic | 45.0% | |
| TTACTTCTGGCAGGTATGCA+TGG | - | chr1_1:13300325-13300344 | Msa0009100:intron | 45.0% | |
| TGCCACATGTGAAACCCATA+TGG | - | chr1_1:13300362-13300381 | Msa0009100:intron | 45.0% | |
| GCCACATGTGAAACCCATAT+GGG | - | chr1_1:13300363-13300382 | Msa0009100:intron | 45.0% | |
| CCACATGTGAAACCCATATG+GGG | - | chr1_1:13300364-13300383 | Msa0009100:intron | 45.0% | |
| CTGTAAAAAGCCACCCCATA+TGG | + | chr1_1:13300380-13300399 | None:intergenic | 45.0% | |
| !!! | TCTTTTTAATAAATAATTTT+TGG | - | chr1_1:13298684-13298703 | Msa0009100:intron | 5.0% |
| GCAATTCTTCGAGATCGAGC+TGG | + | chr1_1:13293919-13293938 | None:intergenic | 50.0% | |
| !! | GGCAAAAGCACCCAAGAATG+TGG | + | chr1_1:13295852-13295871 | None:intergenic | 50.0% |
| TCAGGAGTTGTGCTCTTTCC+TGG | - | chr1_1:13296052-13296071 | Msa0009100:intron | 50.0% | |
| CAGGAGTTGTGCTCTTTCCT+GGG | - | chr1_1:13296053-13296072 | Msa0009100:intron | 50.0% | |
| AGGAGTTGTGCTCTTTCCTG+GGG | - | chr1_1:13296054-13296073 | Msa0009100:intron | 50.0% | |
| GGATTTACCTACCACGCCAA+TGG | + | chr1_1:13296161-13296180 | None:intergenic | 50.0% | |
| TCAGCGATACCGCAAATCGT+AGG | - | chr1_1:13296287-13296306 | Msa0009100:intron | 50.0% | |
| CAAAACCTGTCTGAGGAGCT+GGG | - | chr1_1:13296782-13296801 | Msa0009100:intron | 50.0% | |
| TCGTTGAATGTGGTCACTCG+TGG | - | chr1_1:13297008-13297027 | Msa0009100:CDS | 50.0% | |
| GCTTTCGCTTAAGACGGTGT+TGG | - | chr1_1:13297039-13297058 | Msa0009100:CDS | 50.0% | |
| ! | AAGACGGTGTTGGATCGATG+TGG | - | chr1_1:13297049-13297068 | Msa0009100:CDS | 50.0% |
| TTGGATCGATGTGGAAGGAG+TGG | - | chr1_1:13297058-13297077 | Msa0009100:CDS | 50.0% | |
| ACATACCATCGCGAACTCCA+AGG | - | chr1_1:13297238-13297257 | Msa0009100:CDS | 50.0% | |
| CATACCATCGCGAACTCCAA+GGG | - | chr1_1:13297239-13297258 | Msa0009100:CDS | 50.0% | |
| ! | CGAACTCCAAGGGATGCTTT+TGG | - | chr1_1:13297249-13297268 | Msa0009100:CDS | 50.0% |
| TTGAAGGCAACACACTGGCA+CGG | + | chr1_1:13297308-13297327 | None:intergenic | 50.0% | |
| TGGACAGGACTCCTTAAACG+AGG | - | chr1_1:13297341-13297360 | Msa0009100:intron | 50.0% | |
| ATAGGGAGCTGTTCCTCTTC+TGG | - | chr1_1:13297591-13297610 | Msa0009100:intron | 50.0% | |
| !! | CAAGAGCATTCTTGCCTGGT+TGG | - | chr1_1:13297688-13297707 | Msa0009100:intron | 50.0% |
| GGCAATGTGCGCAACATTTG+AGG | + | chr1_1:13297904-13297923 | None:intergenic | 50.0% | |
| GGAGCCTTGGTACAATGGTT+GGG | - | chr1_1:13298089-13298108 | Msa0009100:intron | 50.0% | |
| GAGCCTTGGTACAATGGTTG+GGG | - | chr1_1:13298090-13298109 | Msa0009100:intron | 50.0% | |
| CAACCCCAACCATTGTACCA+AGG | + | chr1_1:13298096-13298115 | None:intergenic | 50.0% | |
| GGGGTTGTTGCTATGTGACA+AGG | - | chr1_1:13298109-13298128 | Msa0009100:intron | 50.0% | |
| TGATGCCAACGCGAAGCTTA+GGG | + | chr1_1:13298215-13298234 | None:intergenic | 50.0% | |
| GGCATCAGCTAAGAGCTTCA+TGG | - | chr1_1:13298228-13298247 | Msa0009100:CDS | 50.0% | |
| AGATGAATCGGAATGCGCTC+GGG | + | chr1_1:13298481-13298500 | None:intergenic | 50.0% | |
| GTGACATGATCCTTCAAGGG+GGG | - | chr1_1:13298786-13298805 | Msa0009100:intron | 50.0% | |
| TATTGACACTCCCCCCTTGA+AGG | + | chr1_1:13298799-13298818 | None:intergenic | 50.0% | |
| AATCGTTGGTGCACCAAGCA+TGG | - | chr1_1:13299182-13299201 | Msa0009100:intron | 50.0% | |
| TGCAAAGCGGAGTGATATGC+TGG | - | chr1_1:13299621-13299640 | Msa0009100:intron | 50.0% | |
| ATGTCTAGTGAAGGCCCTGT+TGG | - | chr1_1:13299646-13299665 | Msa0009100:intron | 50.0% | |
| AAATGGGCAGACACTTACCC+CGG | + | chr1_1:13299775-13299794 | None:intergenic | 50.0% | |
| ! | AAATGGGAAGTGCAGCTGGA+TGG | + | chr1_1:13300064-13300083 | None:intergenic | 50.0% |
| ! | GGAAAAATGGGAAGTGCAGC+TGG | + | chr1_1:13300068-13300087 | None:intergenic | 50.0% |
| CCCCATATGGGTTTCACATG+TGG | + | chr1_1:13300367-13300386 | None:intergenic | 50.0% | |
| CATGTGAAACCCATATGGGG+TGG | - | chr1_1:13300367-13300386 | Msa0009100:intron | 50.0% | |
| CGTTCCTTACACCATTGGCG+TGG | - | chr1_1:13296147-13296166 | Msa0009100:intron | 55.0% | |
| CCTACCACGCCAATGGTGTA+AGG | + | chr1_1:13296154-13296173 | None:intergenic | 55.0% | |
| CCTTACACCATTGGCGTGGT+AGG | - | chr1_1:13296151-13296170 | Msa0009100:intron | 55.0% | |
| TGCAGTCGTCCCAATGCTTG+CGG | + | chr1_1:13296320-13296339 | None:intergenic | 55.0% | |
| !! | AAGCATTGGGACGACTGCAG+AGG | - | chr1_1:13296321-13296340 | Msa0009100:intron | 55.0% |
| GCAAAACCTGTCTGAGGAGC+TGG | - | chr1_1:13296781-13296800 | Msa0009100:intron | 55.0% | |
| ! | CGGTGTTGGATCGATGTGGA+AGG | - | chr1_1:13297053-13297072 | Msa0009100:CDS | 55.0% |
| AACACACTGGCACGGTTGCA+AGG | + | chr1_1:13297300-13297319 | None:intergenic | 55.0% | |
| TTGCTTGCACAAAGGGCTGC+AGG | - | chr1_1:13297735-13297754 | Msa0009100:intron | 55.0% | |
| TGCGCAACATTTGAGGGCTG+AGG | + | chr1_1:13297897-13297916 | None:intergenic | 55.0% | |
| GGGAGCCTTGGTACAATGGT+TGG | - | chr1_1:13298088-13298107 | Msa0009100:intron | 55.0% | |
| CCAACGCGAAGCTTAGGGAA+GGG | + | chr1_1:13298210-13298229 | None:intergenic | 55.0% | |
| CTGATGCCAACGCGAAGCTT+AGG | + | chr1_1:13298216-13298235 | None:intergenic | 55.0% | |
| AGTCCTGGTTATGGCACCGC+AGG | - | chr1_1:13295154-13295173 | Msa0009100:intron | 60.0% | |
| CTCAAGGGAAGAGTAGCCCC+AGG | + | chr1_1:13296073-13296092 | None:intergenic | 60.0% | |
| CACATCCCAGCTCCTCAGAC+AGG | + | chr1_1:13296790-13296809 | None:intergenic | 60.0% | |
| GCATCCCTTGGAGTTCGCGA+TGG | + | chr1_1:13297246-13297265 | None:intergenic | 60.0% | |
| CCCTTCCCTAAGCTTCGCGT+TGG | - | chr1_1:13298207-13298226 | Msa0009100:CDS | 60.0% | |
| GCCAACGCGAAGCTTAGGGA+AGG | + | chr1_1:13298211-13298230 | None:intergenic | 60.0% | |
| !! | ACGCCTGCGGTGCCATAACC+AGG | + | chr1_1:13295160-13295179 | None:intergenic | 65.0% |
| TCGACAGTACGGGCGCCTAG+AGG | - | chr1_1:13296980-13296999 | Msa0009100:CDS | 65.0% | |
| CAGTACGGGCGCCTAGAGGA+TGG | - | chr1_1:13296984-13297003 | Msa0009100:CDS | 65.0% | |
| TTCACCCGGGACGACGCCTG+CGG | + | chr1_1:13295173-13295192 | None:intergenic | 70.0% | |
| ! | TGGCACCGCAGGCGTCGTCC+CGG | - | chr1_1:13295165-13295184 | Msa0009100:intron | 75.0% |
| !! | GGCACCGCAGGCGTCGTCCC+GGG | - | chr1_1:13295166-13295185 | Msa0009100:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 13293728 | 13300815 | 13293728 | ID=Msa0009100;Name=Msa0009100 |
| chr1_1 | mRNA | 13293728 | 13300815 | 13293728 | ID=Msa0009100-mRNA-1;Parent=Msa0009100;Name=Msa0009100-mRNA-1;_AED=0.10;_eAED=0.10;_QI=114|1|1|1|0.8|0.81|11|283|556 |
| chr1_1 | exon | 13293728 | 13293847 | 13293728 | ID=Msa0009100-mRNA-1:exon:5028;Parent=Msa0009100-mRNA-1 |
| chr1_1 | exon | 13293907 | 13294205 | 13293907 | ID=Msa0009100-mRNA-1:exon:5027;Parent=Msa0009100-mRNA-1 |
| chr1_1 | exon | 13294767 | 13294930 | 13294767 | ID=Msa0009100-mRNA-1:exon:5026;Parent=Msa0009100-mRNA-1 |
| chr1_1 | exon | 13295169 | 13295374 | 13295169 | ID=Msa0009100-mRNA-1:exon:5025;Parent=Msa0009100-mRNA-1 |
| chr1_1 | exon | 13296787 | 13297336 | 13296787 | ID=Msa0009100-mRNA-1:exon:5024;Parent=Msa0009100-mRNA-1 |
| chr1_1 | exon | 13297464 | 13297565 | 13297464 | ID=Msa0009100-mRNA-1:exon:5023;Parent=Msa0009100-mRNA-1 |
| chr1_1 | exon | 13298201 | 13298266 | 13298201 | ID=Msa0009100-mRNA-1:exon:5022;Parent=Msa0009100-mRNA-1 |
| chr1_1 | exon | 13298375 | 13298487 | 13298375 | ID=Msa0009100-mRNA-1:exon:5021;Parent=Msa0009100-mRNA-1 |
| chr1_1 | exon | 13299121 | 13299198 | 13299121 | ID=Msa0009100-mRNA-1:exon:5020;Parent=Msa0009100-mRNA-1 |
| chr1_1 | exon | 13299305 | 13299387 | 13299305 | ID=Msa0009100-mRNA-1:exon:5019;Parent=Msa0009100-mRNA-1 |
| chr1_1 | exon | 13300529 | 13300815 | 13300529 | ID=Msa0009100-mRNA-1:exon:5018;Parent=Msa0009100-mRNA-1 |
| chr1_1 | five_prime_UTR | 13300702 | 13300815 | 13300702 | ID=Msa0009100-mRNA-1:five_prime_utr;Parent=Msa0009100-mRNA-1 |
| chr1_1 | CDS | 13300529 | 13300701 | 13300529 | ID=Msa0009100-mRNA-1:cds;Parent=Msa0009100-mRNA-1 |
| chr1_1 | CDS | 13299305 | 13299387 | 13299305 | ID=Msa0009100-mRNA-1:cds;Parent=Msa0009100-mRNA-1 |
| chr1_1 | CDS | 13299121 | 13299198 | 13299121 | ID=Msa0009100-mRNA-1:cds;Parent=Msa0009100-mRNA-1 |
| chr1_1 | CDS | 13298375 | 13298487 | 13298375 | ID=Msa0009100-mRNA-1:cds;Parent=Msa0009100-mRNA-1 |
| chr1_1 | CDS | 13298201 | 13298266 | 13298201 | ID=Msa0009100-mRNA-1:cds;Parent=Msa0009100-mRNA-1 |
| chr1_1 | CDS | 13297464 | 13297565 | 13297464 | ID=Msa0009100-mRNA-1:cds;Parent=Msa0009100-mRNA-1 |
| chr1_1 | CDS | 13296787 | 13297336 | 13296787 | ID=Msa0009100-mRNA-1:cds;Parent=Msa0009100-mRNA-1 |
| chr1_1 | CDS | 13295169 | 13295374 | 13295169 | ID=Msa0009100-mRNA-1:cds;Parent=Msa0009100-mRNA-1 |
| chr1_1 | CDS | 13294767 | 13294930 | 13294767 | ID=Msa0009100-mRNA-1:cds;Parent=Msa0009100-mRNA-1 |
| chr1_1 | CDS | 13294070 | 13294205 | 13294070 | ID=Msa0009100-mRNA-1:cds;Parent=Msa0009100-mRNA-1 |
| chr1_1 | three_prime_UTR | 13293907 | 13294069 | 13293907 | ID=Msa0009100-mRNA-1:three_prime_utr;Parent=Msa0009100-mRNA-1 |
| chr1_1 | three_prime_UTR | 13293728 | 13293847 | 13293728 | ID=Msa0009100-mRNA-1:three_prime_utr;Parent=Msa0009100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
