Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060350 | XP_013448803.1 | 85.417 | 192 | 10 | 1 | 1 | 192 | 1 | 174 | 2.55e-102 | 302 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060350 | A0A072UAI2 | 85.417 | 192 | 10 | 1 | 1 | 192 | 1 | 174 | 1.22e-102 | 302 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa1060350 | 0.805924 | 1.055458e-49 | -8.615850e-47 |
| Msa0003470 | Msa1060350 | 0.811673 | 6.224141e-51 | -8.615850e-47 |
| Msa0008850 | Msa1060350 | 0.829838 | 4.114040e-55 | -8.615850e-47 |
| Msa0017120 | Msa1060350 | 0.802391 | 5.735783e-49 | -8.615850e-47 |
| Msa0021300 | Msa1060350 | 0.818978 | 1.478322e-52 | -8.615850e-47 |
| Msa0039200 | Msa1060350 | 0.811972 | 5.357376e-51 | -8.615850e-47 |
| Msa0050360 | Msa1060350 | 0.800611 | 1.328826e-48 | -8.615850e-47 |
| Msa0056040 | Msa1060350 | 0.806497 | 7.992928e-50 | -8.615850e-47 |
| Msa0057740 | Msa1060350 | 0.839898 | 1.202866e-57 | -8.615850e-47 |
| Msa0065390 | Msa1060350 | 0.825525 | 4.469792e-54 | -8.615850e-47 |
| Msa0086820 | Msa1060350 | 0.802864 | 4.581653e-49 | -8.615850e-47 |
| Msa0089210 | Msa1060350 | 0.803749 | 3.004416e-49 | -8.615850e-47 |
| Msa0092750 | Msa1060350 | 0.809033 | 2.311267e-50 | -8.615850e-47 |
| Msa0094240 | Msa1060350 | 0.813828 | 2.100235e-51 | -8.615850e-47 |
| Msa0094420 | Msa1060350 | 0.802109 | 6.556561e-49 | -8.615850e-47 |
| Msa0103060 | Msa1060350 | 0.850186 | 1.998206e-60 | -8.615850e-47 |
| Msa0110710 | Msa1060350 | 0.828471 | 8.825490e-55 | -8.615850e-47 |
| Msa0606060 | Msa1060350 | 0.829901 | 3.970769e-55 | -8.615850e-47 |
| Msa0606140 | Msa1060350 | 0.801549 | 8.544810e-49 | -8.615850e-47 |
| Msa0607280 | Msa1060350 | 0.810136 | 1.339265e-50 | -8.615850e-47 |
| Msa0607300 | Msa1060350 | 0.810259 | 1.259914e-50 | -8.615850e-47 |
| Msa0619060 | Msa1060350 | 0.829826 | 4.142134e-55 | -8.615850e-47 |
| Msa0619330 | Msa1060350 | 0.824719 | 6.931898e-54 | -8.615850e-47 |
| Msa0622390 | Msa1060350 | 0.811351 | 7.311416e-51 | -8.615850e-47 |
| Msa0624240 | Msa1060350 | 0.801093 | 1.059603e-48 | -8.615850e-47 |
| Msa0626890 | Msa1060350 | 0.807254 | 5.528956e-50 | -8.615850e-47 |
| Msa0635350 | Msa1060350 | 0.803810 | 2.918815e-49 | -8.615850e-47 |
| Msa0635990 | Msa1060350 | 0.840771 | 7.112084e-58 | -8.615850e-47 |
| Msa0638040 | Msa1060350 | 0.819851 | 9.345284e-53 | -8.615850e-47 |
| Msa0640880 | Msa1060350 | 0.822587 | 2.186970e-53 | -8.615850e-47 |
| Msa0654060 | Msa1060350 | 0.814811 | 1.273961e-51 | -8.615850e-47 |
| Msa0659130 | Msa1060350 | 0.801979 | 6.972450e-49 | -8.615850e-47 |
| Msa0667220 | Msa1060350 | 0.802971 | 4.354498e-49 | -8.615850e-47 |
| Msa0672350 | Msa1060350 | 0.811131 | 8.159800e-51 | -8.615850e-47 |
| Msa0677110 | Msa1060350 | 0.821607 | 3.691333e-53 | -8.615850e-47 |
| Msa0681890 | Msa1060350 | 0.808477 | 3.038321e-50 | -8.615850e-47 |
| Msa0686610 | Msa1060350 | 0.825903 | 3.635574e-54 | -8.615850e-47 |
| Msa0690350 | Msa1060350 | 0.803497 | 3.389511e-49 | -8.615850e-47 |
| Msa0690720 | Msa1060350 | 0.810371 | 1.191815e-50 | -8.615850e-47 |
| Msa0698860 | Msa1060350 | 0.811701 | 6.137530e-51 | -8.615850e-47 |
| Msa0702070 | Msa1060350 | 0.801383 | 9.242194e-49 | -8.615850e-47 |
| Msa0702120 | Msa1060350 | 0.800602 | 1.334680e-48 | -8.615850e-47 |
| Msa0704990 | Msa1060350 | 0.801609 | 8.305013e-49 | -8.615850e-47 |
| Msa0705610 | Msa1060350 | 0.805295 | 1.430351e-49 | -8.615850e-47 |
| Msa0716670 | Msa1060350 | 0.809441 | 1.889603e-50 | -8.615850e-47 |
| Msa0719340 | Msa1060350 | 0.825847 | 3.750207e-54 | -8.615850e-47 |
| Msa0726610 | Msa1060350 | 0.800053 | 1.725789e-48 | -8.615850e-47 |
| Msa0739570 | Msa1060350 | 0.814685 | 1.358715e-51 | -8.615850e-47 |
| Msa0739610 | Msa1060350 | 0.804463 | 2.134183e-49 | -8.615850e-47 |
| Msa0750940 | Msa1060350 | 0.802675 | 5.013805e-49 | -8.615850e-47 |
| Msa0766880 | Msa1060350 | 0.832243 | 1.056351e-55 | -8.615850e-47 |
| Msa0772150 | Msa1060350 | 0.811721 | 6.076742e-51 | -8.615850e-47 |
| Msa0772210 | Msa1060350 | 0.828858 | 7.116326e-55 | -8.615850e-47 |
| Msa0793060 | Msa1060350 | 0.815451 | 9.183251e-52 | -8.615850e-47 |
| Msa0804930 | Msa1060350 | 0.838942 | 2.130228e-57 | -8.615850e-47 |
| Msa0824770 | Msa1060350 | 0.804474 | 2.123044e-49 | -8.615850e-47 |
| Msa0837590 | Msa1060350 | 0.803477 | 3.422332e-49 | -8.615850e-47 |
| Msa0841980 | Msa1060350 | 0.802303 | 5.980662e-49 | -8.615850e-47 |
| Msa0133670 | Msa1060350 | 0.812801 | 3.530882e-51 | -8.615850e-47 |
| Msa0133880 | Msa1060350 | 0.814476 | 1.511170e-51 | -8.615850e-47 |
| Msa0139740 | Msa1060350 | 0.800970 | 1.122573e-48 | -8.615850e-47 |
| Msa0141670 | Msa1060350 | 0.813842 | 2.085898e-51 | -8.615850e-47 |
| Msa0146470 | Msa1060350 | 0.817118 | 3.892446e-52 | -8.615850e-47 |
| Msa0150210 | Msa1060350 | 0.809099 | 2.237255e-50 | -8.615850e-47 |
| Msa0157020 | Msa1060350 | 0.809519 | 1.817947e-50 | -8.615850e-47 |
| Msa0175530 | Msa1060350 | 0.804818 | 1.799355e-49 | -8.615850e-47 |
| Msa0184120 | Msa1060350 | 0.810861 | 9.339939e-51 | -8.615850e-47 |
| Msa0185390 | Msa1060350 | 0.808254 | 3.390368e-50 | -8.615850e-47 |
| Msa0190000 | Msa1060350 | 0.800256 | 1.569257e-48 | -8.615850e-47 |
| Msa0212960 | Msa1060350 | 0.805608 | 1.229413e-49 | -8.615850e-47 |
| Msa0222070 | Msa1060350 | 0.857008 | 2.186024e-62 | -8.615850e-47 |
| Msa0222120 | Msa1060350 | 0.856438 | 3.217902e-62 | -8.615850e-47 |
| Msa0227290 | Msa1060350 | 0.835811 | 1.350195e-56 | -8.615850e-47 |
| Msa0375430 | Msa1060350 | 0.817018 | 4.098111e-52 | -8.615850e-47 |
| Msa0378000 | Msa1060350 | 0.819031 | 1.437978e-52 | -8.615850e-47 |
| Msa0389830 | Msa1060350 | 0.800455 | 1.429699e-48 | -8.615850e-47 |
| Msa0403670 | Msa1060350 | 0.803573 | 3.268666e-49 | -8.615850e-47 |
| Msa0405040 | Msa1060350 | 0.805043 | 1.614947e-49 | -8.615850e-47 |
| Msa0413740 | Msa1060350 | 0.809476 | 1.856630e-50 | -8.615850e-47 |
| Msa0417630 | Msa1060350 | 0.803134 | 4.029232e-49 | -8.615850e-47 |
| Msa0421800 | Msa1060350 | 0.831560 | 1.557546e-55 | -8.615850e-47 |
| Msa0423110 | Msa1060350 | 0.805318 | 1.414200e-49 | -8.615850e-47 |
| Msa0423600 | Msa1060350 | 0.827337 | 1.654145e-54 | -8.615850e-47 |
| Msa0426860 | Msa1060350 | 0.834709 | 2.561924e-56 | -8.615850e-47 |
| Msa0426890 | Msa1060350 | 0.814029 | 1.896473e-51 | -8.615850e-47 |
| Msa0427050 | Msa1060350 | 0.834352 | 3.149090e-56 | -8.615850e-47 |
| Msa0427590 | Msa1060350 | 0.816104 | 6.566291e-52 | -8.615850e-47 |
| Msa0456480 | Msa1060350 | 0.828955 | 6.742822e-55 | -8.615850e-47 |
| Msa0463540 | Msa1060350 | 0.817493 | 3.205252e-52 | -8.615850e-47 |
| Msa0466100 | Msa1060350 | 0.800103 | 1.686340e-48 | -8.615850e-47 |
| Msa0467800 | Msa1060350 | 0.828256 | 9.945809e-55 | -8.615850e-47 |
| Msa0467880 | Msa1060350 | 0.825742 | 3.970625e-54 | -8.615850e-47 |
| Msa0470650 | Msa1060350 | 0.804198 | 2.423415e-49 | -8.615850e-47 |
| Msa0473450 | Msa1060350 | 0.807317 | 5.361635e-50 | -8.615850e-47 |
| Msa0482020 | Msa1060350 | 0.805362 | 1.384691e-49 | -8.615850e-47 |
| Msa0992590 | Msa1060350 | 0.804828 | 1.791236e-49 | -8.615850e-47 |
| Msa1001780 | Msa1060350 | 0.809074 | 2.264919e-50 | -8.615850e-47 |
| Msa1002040 | Msa1060350 | 0.801376 | 9.271733e-49 | -8.615850e-47 |
| Msa1030430 | Msa1060350 | 0.815967 | 7.045179e-52 | -8.615850e-47 |
| Msa1033160 | Msa1060350 | 0.829307 | 5.539862e-55 | -8.615850e-47 |
| Msa1037060 | Msa1060350 | -0.806559 | 7.756318e-50 | -8.615850e-47 |
| Msa1038320 | Msa1060350 | 0.828924 | 6.858713e-55 | -8.615850e-47 |
| Msa1044040 | Msa1060350 | 0.813656 | 2.292046e-51 | -8.615850e-47 |
| Msa1060350 | Msa1067910 | 0.818693 | 1.715704e-52 | -8.615850e-47 |
| Msa1060350 | Msa1069440 | 0.809604 | 1.742654e-50 | -8.615850e-47 |
| Msa1060350 | Msa1079610 | 0.818836 | 1.592231e-52 | -8.615850e-47 |
| Msa1060350 | Msa1124440 | 0.825288 | 5.085375e-54 | -8.615850e-47 |
| Msa1060350 | Msa1126910 | 0.816545 | 5.232157e-52 | -8.615850e-47 |
| Msa1060350 | Msa1130070 | 0.810758 | 9.829081e-51 | -8.615850e-47 |
| Msa1060350 | Msa1130660 | 0.806728 | 7.145336e-50 | -8.615850e-47 |
| Msa1060350 | Msa1138600 | 0.819610 | 1.060862e-52 | -8.615850e-47 |
| Msa1060350 | Msa1148970 | 0.819825 | 9.474434e-53 | -8.615850e-47 |
| Msa1060350 | Msa1161160 | 0.829482 | 5.023488e-55 | -8.615850e-47 |
| Msa1060350 | Msa1164800 | -0.811587 | 6.498195e-51 | -8.615850e-47 |
| Msa1060350 | Msa1166180 | 0.826355 | 2.839711e-54 | -8.615850e-47 |
| Msa1060350 | Msa1166280 | 0.825938 | 3.568039e-54 | -8.615850e-47 |
| Msa1060350 | Msa1168130 | 0.820681 | 6.033403e-53 | -8.615850e-47 |
| Msa1060350 | Msa1173410 | 0.824764 | 6.764087e-54 | -8.615850e-47 |
| Msa1060350 | Msa1175590 | 0.803057 | 4.180655e-49 | -8.615850e-47 |
| Msa1060350 | Msa1178970 | 0.830018 | 3.718344e-55 | -8.615850e-47 |
| Msa1060350 | Msa1183610 | 0.809324 | 2.002175e-50 | -8.615850e-47 |
| Msa1060350 | Msa1195860 | 0.815585 | 8.574760e-52 | -8.615850e-47 |
| Msa1060350 | Msa1199690 | 0.819306 | 1.244991e-52 | -8.615850e-47 |
| Msa1060350 | Msa1209390 | 0.808197 | 3.485655e-50 | -8.615850e-47 |
| Msa1060350 | Msa1209650 | 0.818308 | 2.098030e-52 | -8.615850e-47 |
| Msa1060350 | Msa1214900 | 0.805804 | 1.118525e-49 | -8.615850e-47 |
| Msa1060350 | Msa1220740 | 0.827512 | 1.501552e-54 | -8.615850e-47 |
| Msa1060350 | Msa1226600 | 0.814195 | 1.742971e-51 | -8.615850e-47 |
| Msa1060350 | Msa1246420 | 0.800198 | 1.612909e-48 | -8.615850e-47 |
| Msa1060350 | Msa1263030 | 0.802760 | 4.815260e-49 | -8.615850e-47 |
| Msa1060350 | Msa1263590 | 0.802137 | 6.470638e-49 | -8.615850e-47 |
| Msa1060350 | Msa1293530 | 0.808088 | 3.677422e-50 | -8.615850e-47 |
| Msa1060350 | Msa1298740 | 0.830795 | 2.401006e-55 | -8.615850e-47 |
| Msa1060350 | Msa1300880 | 0.817529 | 3.145525e-52 | -8.615850e-47 |
| Msa1060350 | Msa1309910 | 0.827989 | 1.153589e-54 | -8.615850e-47 |
| Msa1060350 | Msa1323060 | 0.806736 | 7.118357e-50 | -8.615850e-47 |
| Msa1060350 | Msa1325980 | 0.800324 | 1.520247e-48 | -8.615850e-47 |
| Msa1060350 | Msa1327820 | 0.815452 | 9.177310e-52 | -8.615850e-47 |
| Msa1060350 | Msa1334650 | 0.824557 | 7.565508e-54 | -8.615850e-47 |
| Msa1060350 | Msa1341790 | 0.816022 | 6.851754e-52 | -8.615850e-47 |
| Msa1060350 | Msa1342080 | 0.806764 | 7.020939e-50 | -8.615850e-47 |
| Msa1060350 | Msa1349360 | 0.813641 | 2.309189e-51 | -8.615850e-47 |
| Msa1060350 | Msa1352290 | 0.802489 | 5.476173e-49 | -8.615850e-47 |
| Msa1060350 | Msa1352820 | 0.814580 | 1.432891e-51 | -8.615850e-47 |
| Msa1060350 | Msa1365210 | 0.814272 | 1.676125e-51 | -8.615850e-47 |
| Msa1060350 | Msa1379370 | 0.804029 | 2.627460e-49 | -8.615850e-47 |
| Msa1060350 | Msa1381130 | 0.803043 | 4.209039e-49 | -8.615850e-47 |
| Msa1060350 | Msa1384980 | 0.812954 | 3.269708e-51 | -8.615850e-47 |
| Msa1060350 | Msa1385940 | 0.804223 | 2.395262e-49 | -8.615850e-47 |
| Msa1060350 | Msa1387090 | 0.833359 | 5.580230e-56 | -8.615850e-47 |
| Msa1060350 | Msa1395580 | 0.814548 | 1.456648e-51 | -8.615850e-47 |
| Msa1060350 | Msa1397540 | 0.819935 | 8.942423e-53 | -8.615850e-47 |
| Msa1060350 | Msa1405770 | 0.802369 | 5.797945e-49 | -8.615850e-47 |
| Msa1060350 | Msa1406230 | 0.838974 | 2.090165e-57 | -8.615850e-47 |
| Msa1060350 | Msa1410170 | 0.819364 | 1.207155e-52 | -8.615850e-47 |
| Msa1060350 | Msa1418200 | 0.811406 | 7.115374e-51 | -8.615850e-47 |
| Msa1060350 | Msa1423550 | 0.816089 | 6.617535e-52 | -8.615850e-47 |
| Msa1060350 | Msa1426870 | 0.822571 | 2.206239e-53 | -8.615850e-47 |
| Msa1060350 | Msa1428990 | 0.802586 | 5.228440e-49 | -8.615850e-47 |
| Msa1060350 | Msa1435470 | 0.811991 | 5.306385e-51 | -8.615850e-47 |
| Msa1060350 | Msa1449600 | 0.821613 | 3.679490e-53 | -8.615850e-47 |
| Msa1060350 | Msa1450420 | 0.813234 | 2.838192e-51 | -8.615850e-47 |
| Msa1060350 | Msa1451780 | 0.820278 | 7.463826e-53 | -8.615850e-47 |
| Msa1060350 | Msa1456830 | 0.823163 | 1.605849e-53 | -8.615850e-47 |
| Msa1060350 | Msa1458920 | 0.827153 | 1.830669e-54 | -8.615850e-47 |
| Msa1060350 | Msa1466170 | 0.815838 | 7.530376e-52 | -8.615850e-47 |
| Msa0256170 | Msa1060350 | 0.807546 | 4.793763e-50 | -8.615850e-47 |
| Msa0263430 | Msa1060350 | 0.814831 | 1.261109e-51 | -8.615850e-47 |
| Msa0263620 | Msa1060350 | 0.853337 | 2.554646e-61 | -8.615850e-47 |
| Msa0295520 | Msa1060350 | 0.817614 | 3.009280e-52 | -8.615850e-47 |
| Msa0301020 | Msa1060350 | 0.816088 | 6.620969e-52 | -8.615850e-47 |
| Msa0301180 | Msa1060350 | 0.804845 | 1.776177e-49 | -8.615850e-47 |
| Msa0301460 | Msa1060350 | 0.833061 | 6.618960e-56 | -8.615850e-47 |
| Msa0304870 | Msa1060350 | 0.836869 | 7.266619e-57 | -8.615850e-47 |
| Msa0306130 | Msa1060350 | 0.806857 | 6.708420e-50 | -8.615850e-47 |
| Msa0314980 | Msa1060350 | 0.803484 | 3.410058e-49 | -8.615850e-47 |
| Msa0317630 | Msa1060350 | 0.803207 | 3.891355e-49 | -8.615850e-47 |
| Msa0320540 | Msa1060350 | 0.816155 | 6.398099e-52 | -8.615850e-47 |
| Msa0336270 | Msa1060350 | 0.817272 | 3.593238e-52 | -8.615850e-47 |
| Msa0341260 | Msa1060350 | 0.836154 | 1.105293e-56 | -8.615850e-47 |
| Msa0505390 | Msa1060350 | 0.808628 | 2.821139e-50 | -8.615850e-47 |
| Msa0505660 | Msa1060350 | 0.811293 | 7.526228e-51 | -8.615850e-47 |
| Msa0509540 | Msa1060350 | 0.800083 | 1.702345e-48 | -8.615850e-47 |
| Msa0514260 | Msa1060350 | 0.834546 | 2.815008e-56 | -8.615850e-47 |
| Msa0514990 | Msa1060350 | 0.801730 | 7.844184e-49 | -8.615850e-47 |
| Msa0515830 | Msa1060350 | 0.814110 | 1.820149e-51 | -8.615850e-47 |
| Msa0518160 | Msa1060350 | 0.834041 | 3.769327e-56 | -8.615850e-47 |
| Msa0524090 | Msa1060350 | 0.822283 | 2.573955e-53 | -8.615850e-47 |
| Msa0524120 | Msa1060350 | 0.818415 | 1.984098e-52 | -8.615850e-47 |
| Msa0528170 | Msa1060350 | 0.802020 | 6.838491e-49 | -8.615850e-47 |
| Msa0550630 | Msa1060350 | 0.809431 | 1.898902e-50 | -8.615850e-47 |
| Msa0553520 | Msa1060350 | 0.810181 | 1.309800e-50 | -8.615850e-47 |
| Msa0558890 | Msa1060350 | 0.805496 | 1.298004e-49 | -8.615850e-47 |
| Msa0567290 | Msa1060350 | 0.801966 | 7.014542e-49 | -8.615850e-47 |
| Msa0576420 | Msa1060350 | 0.819244 | 1.286121e-52 | -8.615850e-47 |
| Msa0577870 | Msa1060350 | 0.802236 | 6.174743e-49 | -8.615850e-47 |
| Msa0595780 | Msa1060350 | 0.828696 | 7.788109e-55 | -8.615850e-47 |
| Msa0600390 | Msa1060350 | 0.808411 | 3.138136e-50 | -8.615850e-47 |
| Msa0851740 | Msa1060350 | 0.805981 | 1.026449e-49 | -8.615850e-47 |
| Msa0860270 | Msa1060350 | 0.804803 | 1.812297e-49 | -8.615850e-47 |
| Msa0865280 | Msa1060350 | 0.806501 | 7.977785e-50 | -8.615850e-47 |
| Msa0900320 | Msa1060350 | 0.803525 | 3.344427e-49 | -8.615850e-47 |
| Msa0910650 | Msa1060350 | 0.811015 | 8.647422e-51 | -8.615850e-47 |
| Msa0929820 | Msa1060350 | 0.803275 | 3.767416e-49 | -8.615850e-47 |
| Msa0967450 | Msa1060350 | 0.804423 | 2.175255e-49 | -8.615850e-47 |
| Msa0971860 | Msa1060350 | 0.820104 | 8.182372e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060350 | MtrunA17_Chr7g0237811 | 85.417 | 192 | 10 | 1 | 1 | 192 | 1 | 174 | 2.34e-106 | 302 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1060350 | AT4G13220.1 | 50.000 | 170 | 64 | 3 | 26 | 192 | 25 | 176 | 1.09e-46 | 151 |
Find 49 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTACAGCTTTCTTTATTT+TGG | 0.099548 | 7_2:+48253866 | Msa1060350:CDS |
| GCACCCTGAGGCTTTGTTAA+AGG | 0.218482 | 7_2:-48254933 | None:intergenic |
| CTTTAACTTCAAAACCGAAT+TGG | 0.273391 | 7_2:-48248126 | None:intergenic |
| TTTAACTTCAAAACCGAATT+GGG | 0.351112 | 7_2:-48248125 | None:intergenic |
| TCAATTTCGTTCACCCAATT+CGG | 0.375040 | 7_2:+48248112 | Msa1060350:CDS |
| GTCACTGAAATCCTTGCTAT+TGG | 0.387180 | 7_2:-48253798 | None:intergenic |
| ATCCTTTGGAAGAGGCTAAT+AGG | 0.388720 | 7_2:+48254704 | Msa1060350:CDS |
| CTTGATCTTTATTGAATGCT+AGG | 0.393502 | 7_2:-48254636 | None:intergenic |
| GAAATCCTTGCTATTGGTCT+TGG | 0.422289 | 7_2:-48253792 | None:intergenic |
| ATGTATAATATGAAATTGAT+TGG | 0.437639 | 7_2:-48254773 | None:intergenic |
| CAAAGGATCATCCATAGGTT+TGG | 0.442636 | 7_2:-48254689 | None:intergenic |
| CAAACCTATGGATGATCCTT+TGG | 0.442745 | 7_2:+48254690 | Msa1060350:CDS |
| GGAAGAGGCTAATAGGATAA+TGG | 0.446378 | 7_2:+48254711 | Msa1060350:CDS |
| ATAGCCTTTAACAAAGCCTC+AGG | 0.448382 | 7_2:+48254929 | Msa1060350:three_prime_UTR |
| TTGCTTTCAAAATCGAAACT+TGG | 0.450223 | 7_2:+48248076 | Msa1060350:CDS |
| GCATGGAGAGTTGGTAAGGA+TGG | 0.452265 | 7_2:+48253433 | Msa1060350:CDS |
| AAAATGAAAGAGCAATAGTT+AGG | 0.463203 | 7_2:-48253372 | None:intergenic |
| CAAGAACCACCTAGCGGGAA+TGG | 0.467436 | 7_2:+48254655 | Msa1060350:CDS |
| CAAAACAAACTTTGACAGAA+TGG | 0.481504 | 7_2:+48254850 | Msa1060350:three_prime_UTR |
| GAACAATCGAATTTATCTAA+AGG | 0.487407 | 7_2:+48248227 | Msa1060350:CDS |
| AACACAAGAGAACAAACATT+AGG | 0.491344 | 7_2:-48247913 | None:intergenic |
| GTTTGTTCATAGGCTACCAT+AGG | 0.522734 | 7_2:+48254595 | Msa1060350:intron |
| CTGCAGAATGCATGGAGAGT+TGG | 0.536539 | 7_2:+48253424 | Msa1060350:CDS |
| TGGGTGAACGAAATTGATGA+TGG | 0.537607 | 7_2:-48248106 | None:intergenic |
| AGGAACTACGACCAAACCTA+TGG | 0.545163 | 7_2:+48254678 | Msa1060350:CDS |
| GGTAAGGATGGAATTGATGC+AGG | 0.549168 | 7_2:+48253445 | Msa1060350:CDS |
| TGCAAAGTATGCAAGTCCTA+TGG | 0.552339 | 7_2:-48254611 | None:intergenic |
| GGTGCACGTGGGAATGGAAG+AGG | 0.555504 | 7_2:-48247950 | None:intergenic |
| AGATAGTTCTGCAGAATGCA+TGG | 0.555735 | 7_2:+48253416 | Msa1060350:CDS |
| AAGATCAAGAACCACCTAGC+GGG | 0.560815 | 7_2:+48254650 | Msa1060350:CDS |
| ATCCTATTAGCCTCTTCCAA+AGG | 0.564567 | 7_2:-48254706 | None:intergenic |
| TATGGATGATCCTTTGGAAG+AGG | 0.564870 | 7_2:+48254696 | Msa1060350:CDS |
| AAAGTTGTGAACAAAACCAT+TGG | 0.570596 | 7_2:-48248039 | None:intergenic |
| GTAGTTCCTCCATTCCCGCT+AGG | 0.572693 | 7_2:-48254664 | None:intergenic |
| TCTTCCAAAGGATCATCCAT+AGG | 0.581655 | 7_2:-48254694 | None:intergenic |
| CTGCTCGTTCCAAGCACCCG+TGG | 0.596725 | 7_2:-48255125 | None:intergenic |
| GAACGAAATTGATGATGGGT+AGG | 0.599016 | 7_2:-48248101 | None:intergenic |
| TCGCTTTGTTTAGTTATGTG+TGG | 0.600291 | 7_2:+48255021 | Msa1060350:three_prime_UTR |
| GAATGCATGGAGAGTTGGTA+AGG | 0.601699 | 7_2:+48253429 | Msa1060350:CDS |
| AAATAAAGAAAGCTGTAGAG+AGG | 0.616626 | 7_2:-48253863 | None:intergenic |
| GTTCCTCCATTCCCGCTAGG+TGG | 0.621366 | 7_2:-48254661 | None:intergenic |
| GAACCACCTAGCGGGAATGG+AGG | 0.633606 | 7_2:+48254658 | Msa1060350:CDS |
| CTGTACCAAGACCAATAGCA+AGG | 0.633937 | 7_2:+48253787 | Msa1060350:CDS |
| GGGTGAACGAAATTGATGAT+GGG | 0.652854 | 7_2:-48248105 | None:intergenic |
| TAGCCTTTAACAAAGCCTCA+GGG | 0.671889 | 7_2:+48254930 | Msa1060350:three_prime_UTR |
| AAAACTACGAAATTGGAGCG+AGG | 0.691122 | 7_2:-48248200 | None:intergenic |
| AAAATGTCATTTGCACCCTG+AGG | 0.693528 | 7_2:-48254945 | None:intergenic |
| AAAGATCAAGAACCACCTAG+CGG | 0.725332 | 7_2:+48254649 | Msa1060350:CDS |
| TGAAGACAACAGAAACAGAG+TGG | 0.736874 | 7_2:-48247889 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAACAATAAATATAATAAA+AGG | - | chr7_2:48248908-48248927 | None:intergenic | 10.0% |
| !! | AAATTGAAAGATAAAATAAA+AGG | - | chr7_2:48251440-48251459 | None:intergenic | 10.0% |
| !! | AAAAATATTCTATATATGAA+TGG | + | chr7_2:48251560-48251579 | Msa1060350:intron | 10.0% |
| !! | TATTATTCATAAATTTGTAA+AGG | + | chr7_2:48251946-48251965 | Msa1060350:intron | 10.0% |
| !!! | TTTTAATATGATATGAAAAA+TGG | - | chr7_2:48253900-48253919 | None:intergenic | 10.0% |
| !!! | TGTTTTTAAACAAGTTATTT+TGG | + | chr7_2:48248271-48248290 | Msa1060350:intron | 15.0% |
| !!! | AATTGTATAATGTTTTTGTT+TGG | - | chr7_2:48248622-48248641 | None:intergenic | 15.0% |
| !!! | CAAATATTTTGTAAAGAAAA+TGG | + | chr7_2:48248823-48248842 | Msa1060350:intron | 15.0% |
| !!! | TTATAGATAGTAATTAGTTT+TGG | - | chr7_2:48249128-48249147 | None:intergenic | 15.0% |
| !!! | TTTAAAATTTTGTCAAAGTT+TGG | - | chr7_2:48249816-48249835 | None:intergenic | 15.0% |
| !! | AAAGGTAATCAAATAAAAAA+GGG | - | chr7_2:48249887-48249906 | None:intergenic | 15.0% |
| !! | AAAAGGTAATCAAATAAAAA+AGG | - | chr7_2:48249888-48249907 | None:intergenic | 15.0% |
| !! | TCAAAAAAAAAAAAGAGTAA+AGG | + | chr7_2:48250307-48250326 | Msa1060350:intron | 15.0% |
| !! | TGTTCATATTATTATAGTTT+AGG | - | chr7_2:48250632-48250651 | None:intergenic | 15.0% |
| !!! | AGAATTAAAGTATTAAAAAG+TGG | - | chr7_2:48250712-48250731 | None:intergenic | 15.0% |
| !! | TATTTAAGTAAAGAATAGTT+TGG | + | chr7_2:48251852-48251871 | Msa1060350:intron | 15.0% |
| !!! | TCATTTTTTTATTATCTTTG+TGG | + | chr7_2:48253388-48253407 | Msa1060350:CDS | 15.0% |
| !! | ATGTATAATATGAAATTGAT+TGG | - | chr7_2:48254776-48254795 | None:intergenic | 15.0% |
| !! | TAGTTTGGTTAATTAGATTT+AGG | + | chr7_2:48248310-48248329 | Msa1060350:intron | 20.0% |
| !!! | ATAGTATTGGCTTTATTAAT+AGG | - | chr7_2:48248442-48248461 | None:intergenic | 20.0% |
| !!! | ATAAAGCCAATACTATTTTT+TGG | + | chr7_2:48248446-48248465 | Msa1060350:intron | 20.0% |
| !!! | ATTTTGGGATTTACAAAAAA+AGG | - | chr7_2:48248477-48248496 | None:intergenic | 20.0% |
| !!! | GTTGATTTTTTCTTAATAAC+TGG | - | chr7_2:48248522-48248541 | None:intergenic | 20.0% |
| !!! | TTTTTGTTTGGAAATGTTTT+GGG | - | chr7_2:48248610-48248629 | None:intergenic | 20.0% |
| !!! | CTTTTTTATTATTAGTAGCA+TGG | + | chr7_2:48248931-48248950 | Msa1060350:intron | 20.0% |
| !!! | AGTTTTTTGTGTAGAATTTA+AGG | + | chr7_2:48249440-48249459 | Msa1060350:intron | 20.0% |
| !! | TTAATCCTCTAATTAATTGA+AGG | - | chr7_2:48249664-48249683 | None:intergenic | 20.0% |
| !! | AATTAATTAGAGGATTAAAC+AGG | + | chr7_2:48249666-48249685 | Msa1060350:intron | 20.0% |
| !! | CAACTATAAACTCTTAATAA+AGG | - | chr7_2:48249723-48249742 | None:intergenic | 20.0% |
| !! | CTTTATTAAGAGTTTATAGT+TGG | + | chr7_2:48249721-48249740 | Msa1060350:intron | 20.0% |
| !! | TTTAAACAAGAGTTTATAGT+TGG | + | chr7_2:48249830-48249849 | Msa1060350:intron | 20.0% |
| !! | GATATATAAGACATACAAAA+AGG | - | chr7_2:48249905-48249924 | None:intergenic | 20.0% |
| !!! | CCAAGTAAATTTACATTTTT+GGG | - | chr7_2:48250785-48250804 | None:intergenic | 20.0% |
| !! | CCAAAAATGTAAATTTACTT+GGG | + | chr7_2:48250783-48250802 | Msa1060350:intron | 20.0% |
| !!! | CTTCATTTCTTCTTTTATAT+AGG | - | chr7_2:48250959-48250978 | None:intergenic | 20.0% |
| !! | ATGTATCTTTATGAACTAAA+AGG | + | chr7_2:48251502-48251521 | Msa1060350:intron | 20.0% |
| !!! | CAATTCGTTATATTTTGTTT+GGG | - | chr7_2:48251617-48251636 | None:intergenic | 20.0% |
| !!! | ACAATTCGTTATATTTTGTT+TGG | - | chr7_2:48251618-48251637 | None:intergenic | 20.0% |
| !! | TATGTTTCTTGTGAAAATAT+TGG | - | chr7_2:48251705-48251724 | None:intergenic | 20.0% |
| !! | AAAATTGTATCTTCATAAAC+TGG | - | chr7_2:48251986-48252005 | None:intergenic | 20.0% |
| !! | AGGAACTATATTAATTGAAT+AGG | + | chr7_2:48252103-48252122 | Msa1060350:intron | 20.0% |
| !! | AATTAGTTGAAGTTATTACT+AGG | - | chr7_2:48252143-48252162 | None:intergenic | 20.0% |
| !!! | TTAACTTCTTTTTTTTACGA+AGG | - | chr7_2:48252332-48252351 | None:intergenic | 20.0% |
| !! | ATTCTTATTCTAAATTGAAC+TGG | + | chr7_2:48252365-48252384 | Msa1060350:intron | 20.0% |
| !!! | CAACATATTTTAAAGGTTTT+CGG | - | chr7_2:48252509-48252528 | None:intergenic | 20.0% |
| !!! | TCTCAAGAAAAAGTTTATTT+TGG | + | chr7_2:48252654-48252673 | Msa1060350:intron | 20.0% |
| !!! | CTCAAGAAAAAGTTTATTTT+GGG | + | chr7_2:48252655-48252674 | Msa1060350:intron | 20.0% |
| !! | AATAAAACCTTAATCATACA+TGG | - | chr7_2:48252994-48253013 | None:intergenic | 20.0% |
| !!! | TGTATGATTAAGGTTTTATT+TGG | + | chr7_2:48252994-48253013 | Msa1060350:intron | 20.0% |
| !!! | AATTTTATGTCCTTCATAAT+TGG | + | chr7_2:48253300-48253319 | Msa1060350:intron | 20.0% |
| !!! | ATTTTATGTCCTTCATAATT+GGG | + | chr7_2:48253301-48253320 | Msa1060350:intron | 20.0% |
| !! | ATAGTTGAGACTTATTTATA+GGG | - | chr7_2:48254058-48254077 | None:intergenic | 20.0% |
| !! | AATAGTTGAGACTTATTTAT+AGG | - | chr7_2:48254059-48254078 | None:intergenic | 20.0% |
| !! | ATATATACTGTTATGAATCA+TGG | - | chr7_2:48254205-48254224 | None:intergenic | 20.0% |
| !! | TTCCCTTTAATAACATAATA+TGG | - | chr7_2:48254266-48254285 | None:intergenic | 20.0% |
| !!! | ATGTTGTTTTGATTGGTTTT+AGG | - | chr7_2:48247974-48247993 | None:intergenic | 25.0% |
| !!! | CTAAACAATGTTGTTTTGAT+TGG | - | chr7_2:48247981-48248000 | None:intergenic | 25.0% |
| !! | TTTAACTTCAAAACCGAATT+GGG | - | chr7_2:48248128-48248147 | None:intergenic | 25.0% |
| ! | GAACAATCGAATTTATCTAA+AGG | + | chr7_2:48248227-48248246 | Msa1060350:CDS | 25.0% |
| ! | ATCGAATTTATCTAAAGGTT+AGG | + | chr7_2:48248232-48248251 | Msa1060350:intron | 25.0% |
| ! | TAGGTTGTAATGTTTAAAAG+AGG | + | chr7_2:48248329-48248348 | Msa1060350:intron | 25.0% |
| ! | TAATGTTTAAAAGAGGTGAA+GGG | + | chr7_2:48248336-48248355 | Msa1060350:intron | 25.0% |
| !!! | AGACAATTTTGTGTTTTAAG+TGG | - | chr7_2:48248584-48248603 | None:intergenic | 25.0% |
| !!! | GTTTTTGTTTGGAAATGTTT+TGG | - | chr7_2:48248611-48248630 | None:intergenic | 25.0% |
| ! | AAAATTTAATTCCCCACAAA+TGG | + | chr7_2:48248786-48248805 | Msa1060350:intron | 25.0% |
| ! | AATAAAAGGTAAAACATCCA+AGG | - | chr7_2:48248894-48248913 | None:intergenic | 25.0% |
| !!! | CTCTTTTCTTTCTTATTTCA+TGG | + | chr7_2:48249021-48249040 | Msa1060350:intron | 25.0% |
| !!! | TAGTTTTGGCTATAAAAATC+AGG | - | chr7_2:48249114-48249133 | None:intergenic | 25.0% |
| ! | TAACCGATAATAATTGCTAA+GGG | - | chr7_2:48249186-48249205 | None:intergenic | 25.0% |
| ! | TTAACCGATAATAATTGCTA+AGG | - | chr7_2:48249187-48249206 | None:intergenic | 25.0% |
| ! | TGTAATTGTAGTTAAACAAG+CGG | + | chr7_2:48249231-48249250 | Msa1060350:intron | 25.0% |
| ! | AGAGGAAAATATTGTGAAAA+AGG | + | chr7_2:48249393-48249412 | Msa1060350:intron | 25.0% |
| ! | GAGGAAAATATTGTGAAAAA+GGG | + | chr7_2:48249394-48249413 | Msa1060350:intron | 25.0% |
| ! | AGGAAAATATTGTGAAAAAG+GGG | + | chr7_2:48249395-48249414 | Msa1060350:intron | 25.0% |
| !! | AGAATTTAAGGATTTTTGTG+CGG | + | chr7_2:48249452-48249471 | Msa1060350:intron | 25.0% |
| !! | ATGGTGACTTTCATTTTAAA+TGG | + | chr7_2:48249509-48249528 | Msa1060350:intron | 25.0% |
| !! | ACTTTCATTTTAAATGGTCA+TGG | + | chr7_2:48249515-48249534 | Msa1060350:intron | 25.0% |
| !! | TTTTGTTGAATTCACATTCA+TGG | + | chr7_2:48249616-48249635 | Msa1060350:intron | 25.0% |
| ! | ACTAACCTTCAATTAATTAG+AGG | + | chr7_2:48249656-48249675 | Msa1060350:intron | 25.0% |
| ! | GTTGGATTTACATCTTAAAT+TGG | + | chr7_2:48249739-48249758 | Msa1060350:intron | 25.0% |
| !! | AAAATTTTGTCAAAGTTTGG+CGG | - | chr7_2:48249813-48249832 | None:intergenic | 25.0% |
| ! | GTAAAGAACACTATTAGTAT+TGG | - | chr7_2:48250095-48250114 | None:intergenic | 25.0% |
| ! | AATAGTGTTCTTTACAAGTA+CGG | + | chr7_2:48250100-48250119 | Msa1060350:intron | 25.0% |
| ! | AAAATGAAAGTCAAGAGTAA+AGG | + | chr7_2:48250166-48250185 | Msa1060350:intron | 25.0% |
| !! | TTTGAGATATTCTATCTTGA+TGG | + | chr7_2:48250540-48250559 | Msa1060350:intron | 25.0% |
| !!! | ATGAACAATTACTTTTTCAC+CGG | + | chr7_2:48250645-48250664 | Msa1060350:intron | 25.0% |
| !!! | ATGATTGTTCTTGCTTTTTA+AGG | + | chr7_2:48250675-48250694 | Msa1060350:intron | 25.0% |
| ! | CCCAAAAATGTAAATTTACT+TGG | + | chr7_2:48250782-48250801 | Msa1060350:intron | 25.0% |
| !! | CCCAAGTAAATTTACATTTT+TGG | - | chr7_2:48250786-48250805 | None:intergenic | 25.0% |
| ! | TGTAAATTTACTTGGGTTTA+AGG | + | chr7_2:48250790-48250809 | Msa1060350:intron | 25.0% |
| ! | AATGTGTTTATCCTCTTAAT+GGG | + | chr7_2:48250861-48250880 | Msa1060350:intron | 25.0% |
| !!! | GTCAATCGTTTTAAGTTTAT+TGG | + | chr7_2:48251025-48251044 | Msa1060350:intron | 25.0% |
| ! | ATAAGCAAGCTTGAAAAATA+AGG | + | chr7_2:48251182-48251201 | Msa1060350:intron | 25.0% |
| ! | AAGTATTATGACACACAATT+TGG | + | chr7_2:48251311-48251330 | Msa1060350:intron | 25.0% |
| ! | AAAATGGTAACCATAATGTT+GGG | - | chr7_2:48251343-48251362 | None:intergenic | 25.0% |
| ! | AAAAATGGTAACCATAATGT+TGG | - | chr7_2:48251344-48251363 | None:intergenic | 25.0% |
| ! | GTGACTTAAACAAACAAAAA+TGG | - | chr7_2:48251359-48251378 | None:intergenic | 25.0% |
| ! | GTATGTGTTGAAATAAAAGA+CGG | + | chr7_2:48251524-48251543 | Msa1060350:intron | 25.0% |
| ! | ATATATTTCTCATGAACGTA+TGG | - | chr7_2:48251656-48251675 | None:intergenic | 25.0% |
| ! | TTCTAAATTGAACTGGTTAA+TGG | + | chr7_2:48252372-48252391 | Msa1060350:intron | 25.0% |
| !!! | CAAGGTACAACATATTTTAA+AGG | - | chr7_2:48252516-48252535 | None:intergenic | 25.0% |
| ! | AATATGTTGTACCTTGATTA+AGG | + | chr7_2:48252520-48252539 | Msa1060350:intron | 25.0% |
| ! | AAACATAAAGACCTTAATCA+AGG | - | chr7_2:48252534-48252553 | None:intergenic | 25.0% |
| ! | TGATTAAGGTCTTTATGTTT+AGG | + | chr7_2:48252534-48252553 | Msa1060350:intron | 25.0% |
| !! | TAGTTAAGTTGTTTATCCTA+AGG | + | chr7_2:48253242-48253261 | Msa1060350:intron | 25.0% |
| ! | AAAATGAAAGAGCAATAGTT+AGG | - | chr7_2:48253375-48253394 | None:intergenic | 25.0% |
| ! | TTGTACTAAATCACTTATTG+CGG | - | chr7_2:48253574-48253593 | None:intergenic | 25.0% |
| ! | GTAAAAAACTTGAAAACAAC+AGG | - | chr7_2:48253698-48253717 | None:intergenic | 25.0% |
| ! | ATAGTGAATAAACCATAGTT+AGG | + | chr7_2:48253970-48253989 | Msa1060350:intron | 25.0% |
| ! | GTTTACATATAACCTAACTA+TGG | - | chr7_2:48253985-48254004 | None:intergenic | 25.0% |
| ! | GTTAGGTTATATGTAAACTA+TGG | + | chr7_2:48253987-48254006 | Msa1060350:intron | 25.0% |
| ! | TAGTTGAGACTTATTTATAG+GGG | - | chr7_2:48254057-48254076 | None:intergenic | 25.0% |
| ! | TGGCCATATTATGTTATTAA+AGG | + | chr7_2:48254260-48254279 | Msa1060350:intron | 25.0% |
| ! | GGCCATATTATGTTATTAAA+GGG | + | chr7_2:48254261-48254280 | Msa1060350:intron | 25.0% |
| ! | AAAAATTCAACCCTACAAAA+GGG | - | chr7_2:48254317-48254336 | None:intergenic | 25.0% |
| ! | AAAAAATTCAACCCTACAAA+AGG | - | chr7_2:48254318-48254337 | None:intergenic | 25.0% |
| !!! | TACAAAGTATTGTCAAACAA+CGG | + | chr7_2:48254419-48254438 | Msa1060350:intron | 25.0% |
| !! | AACATCAATGCTATATTTTG+TGG | + | chr7_2:48254556-48254575 | Msa1060350:intron | 25.0% |
| !!! | ATTGTTAGTTTTGATGACAA+AGG | + | chr7_2:48254818-48254837 | Msa1060350:three_prime_UTR | 25.0% |
| AACACAAGAGAACAAACATT+AGG | - | chr7_2:48247916-48247935 | None:intergenic | 30.0% | |
| AGAACAAAAATGTTTGCCAA+TGG | + | chr7_2:48248023-48248042 | Msa1060350:exon | 30.0% | |
| AAAGTTGTGAACAAAACCAT+TGG | - | chr7_2:48248042-48248061 | None:intergenic | 30.0% | |
| !! | TTTCGATTTTGAAAGCAACA+TGG | - | chr7_2:48248074-48248093 | None:intergenic | 30.0% |
| TTGCTTTCAAAATCGAAACT+TGG | + | chr7_2:48248076-48248095 | Msa1060350:CDS | 30.0% | |
| ! | CTTTAACTTCAAAACCGAAT+TGG | - | chr7_2:48248129-48248148 | None:intergenic | 30.0% |
| TTCTGCAAAAACTACGAAAT+TGG | - | chr7_2:48248210-48248229 | None:intergenic | 30.0% | |
| TTGATGCATTTCTCTTAGTT+TGG | + | chr7_2:48248295-48248314 | Msa1060350:intron | 30.0% | |
| GTAATGTTTAAAAGAGGTGA+AGG | + | chr7_2:48248335-48248354 | Msa1060350:intron | 30.0% | |
| GCTACACCAAAAAATAGTAT+TGG | - | chr7_2:48248455-48248474 | None:intergenic | 30.0% | |
| !! | TTTGTGTTTTAAGTGGTGTA+TGG | - | chr7_2:48248577-48248596 | None:intergenic | 30.0% |
| AATTGAAAATCTGTTGAGAG+AGG | + | chr7_2:48248638-48248657 | Msa1060350:intron | 30.0% | |
| ! | GTAGTCAAAATAGGTTGAAT+TGG | - | chr7_2:48248702-48248721 | None:intergenic | 30.0% |
| TAGTTATGAAACCTCTGATT+TGG | - | chr7_2:48248729-48248748 | None:intergenic | 30.0% | |
| ATGGCAGATAATACAAAAAG+TGG | + | chr7_2:48248842-48248861 | Msa1060350:intron | 30.0% | |
| ! | ATAATTGCTAAGGGAGTTTT+CGG | - | chr7_2:48249177-48249196 | None:intergenic | 30.0% |
| ACTCCCTTAGCAATTATTAT+CGG | + | chr7_2:48249180-48249199 | Msa1060350:intron | 30.0% | |
| ACTACAATTACACAGAAAGA+TGG | - | chr7_2:48249223-48249242 | None:intergenic | 30.0% | |
| AATGAGTTTAATTGTGAGTG+GGG | - | chr7_2:48249285-48249304 | None:intergenic | 30.0% | |
| CAATGAGTTTAATTGTGAGT+GGG | - | chr7_2:48249286-48249305 | None:intergenic | 30.0% | |
| TTGATTAAACGTACTTCTTG+TGG | - | chr7_2:48249421-48249440 | None:intergenic | 30.0% | |
| TTGAAATGGTTATGTAGTCA+TGG | + | chr7_2:48249490-48249509 | Msa1060350:intron | 30.0% | |
| GAAAAATTTATTCCAGATGG+TGG | - | chr7_2:48249693-48249712 | None:intergenic | 30.0% | |
| GCTGAAAAATTTATTCCAGA+TGG | - | chr7_2:48249696-48249715 | None:intergenic | 30.0% | |
| !!! | TATCTTGCCATTTTGTGTAA+TGG | + | chr7_2:48249786-48249805 | Msa1060350:intron | 30.0% |
| AGAGTTTATAGTTGGATACT+TGG | + | chr7_2:48249838-48249857 | Msa1060350:intron | 30.0% | |
| AAGTCAATAACAATAGTGCA+AGG | + | chr7_2:48249984-48250003 | Msa1060350:intron | 30.0% | |
| ! | GAATTGAATCTGAAACCTTA+AGG | - | chr7_2:48250250-48250269 | None:intergenic | 30.0% |
| ! | CTAAATTAACCCACCTATTT+TGG | - | chr7_2:48250282-48250301 | None:intergenic | 30.0% |
| !! | TGACATTTTTAGAAAAGACG+AGG | + | chr7_2:48250346-48250365 | Msa1060350:intron | 30.0% |
| AAAGCAACCAAAAAAACTAG+CGG | + | chr7_2:48250442-48250461 | Msa1060350:intron | 30.0% | |
| !!! | TCTTTTACCGCTAGTTTTTT+TGG | - | chr7_2:48250452-48250471 | None:intergenic | 30.0% |
| ! | AAGAACAATCATAAGAGTAC+CGG | - | chr7_2:48250667-48250686 | None:intergenic | 30.0% |
| AAATTTACTTGGGTTTAAGG+TGG | + | chr7_2:48250793-48250812 | Msa1060350:intron | 30.0% | |
| CAATGTGTTTATCCTCTTAA+TGG | + | chr7_2:48250860-48250879 | Msa1060350:intron | 30.0% | |
| ATGTGTTTATCCTCTTAATG+GGG | + | chr7_2:48250862-48250881 | Msa1060350:intron | 30.0% | |
| ! | TTTAAGTTAAGTGCATGTAG+TGG | + | chr7_2:48250894-48250913 | Msa1060350:intron | 30.0% |
| !! | TGTCTAGTGGCTTTATTAAT+AGG | - | chr7_2:48251138-48251157 | None:intergenic | 30.0% |
| CACTAGACATTAATCAATGA+GGG | + | chr7_2:48251149-48251168 | Msa1060350:intron | 30.0% | |
| AAGATAAGTCAATCCATAGA+GGG | + | chr7_2:48252074-48252093 | Msa1060350:intron | 30.0% | |
| AAGTTATTACTAGGTGACTA+GGG | - | chr7_2:48252134-48252153 | None:intergenic | 30.0% | |
| ACATTACATTAGCATGATCT+TGG | + | chr7_2:48252466-48252485 | Msa1060350:intron | 30.0% | |
| !!! | GTTTATTTTGGGATGTAAGA+TGG | + | chr7_2:48252666-48252685 | Msa1060350:intron | 30.0% |
| ! | ATTTTCACTTGGCATATACA+AGG | - | chr7_2:48252747-48252766 | None:intergenic | 30.0% |
| ! | TTCTCTGTGAAATTTTCACT+TGG | - | chr7_2:48252758-48252777 | None:intergenic | 30.0% |
| ! | ACGAAAACTAGGTACATTTT+AGG | - | chr7_2:48252801-48252820 | None:intergenic | 30.0% |
| AAGATATGATCCTTTCATGA+TGG | + | chr7_2:48252839-48252858 | Msa1060350:intron | 30.0% | |
| AATACAGTAACCATCATGAA+AGG | - | chr7_2:48252852-48252871 | None:intergenic | 30.0% | |
| !! | TTGTCTTTTGGAAATTCATG+TGG | + | chr7_2:48252893-48252912 | Msa1060350:intron | 30.0% |
| !! | TGTCTTTTGGAAATTCATGT+GGG | + | chr7_2:48252894-48252913 | Msa1060350:intron | 30.0% |
| ! | TGGTGTTTTCCTTTCAAAAT+AGG | - | chr7_2:48252974-48252993 | None:intergenic | 30.0% |
| GAAAACACCATGTATGATTA+AGG | + | chr7_2:48252984-48253003 | Msa1060350:intron | 30.0% | |
| ! | TCTTAAAGTGCTTACATCAT+TGG | - | chr7_2:48253040-48253059 | None:intergenic | 30.0% |
| !! | CTTATTTTCATTAGCTCTCT+AGG | + | chr7_2:48253115-48253134 | Msa1060350:intron | 30.0% |
| TTAAGTGTTCCCAATTATGA+AGG | - | chr7_2:48253313-48253332 | None:intergenic | 30.0% | |
| AATGGTAATTGTGACTTACA+GGG | - | chr7_2:48253483-48253502 | None:intergenic | 30.0% | |
| AAATGGTAATTGTGACTTAC+AGG | - | chr7_2:48253484-48253503 | None:intergenic | 30.0% | |
| TAAGTCACAATTACCATTTC+CGG | + | chr7_2:48253485-48253504 | Msa1060350:intron | 30.0% | |
| TAGCAGATATTTGTGCTATA+TGG | + | chr7_2:48253519-48253538 | Msa1060350:intron | 30.0% | |
| ATATTTGTGCTATATGGTAG+CGG | + | chr7_2:48253525-48253544 | Msa1060350:intron | 30.0% | |
| GAGAAACATGAAAAACTAGA+AGG | - | chr7_2:48253734-48253753 | None:intergenic | 30.0% | |
| AAATAAAGAAAGCTGTAGAG+AGG | - | chr7_2:48253866-48253885 | None:intergenic | 30.0% | |
| !! | CTCTACAGCTTTCTTTATTT+TGG | + | chr7_2:48253866-48253885 | Msa1060350:CDS | 30.0% |
| ! | CTATGGTTAGTTAGTTAGTT+AGG | + | chr7_2:48254004-48254023 | Msa1060350:intron | 30.0% |
| ! | ATATGTCTTTTCCCTTTTGT+AGG | + | chr7_2:48254303-48254322 | Msa1060350:intron | 30.0% |
| ! | TATGTCTTTTCCCTTTTGTA+GGG | + | chr7_2:48254304-48254323 | Msa1060350:intron | 30.0% |
| ATCCTAAAGTCTTAACCATT+GGG | - | chr7_2:48254522-48254541 | None:intergenic | 30.0% | |
| TATCCTAAAGTCTTAACCAT+TGG | - | chr7_2:48254523-48254542 | None:intergenic | 30.0% | |
| CAAGTACATTGTTTGTTCAT+AGG | + | chr7_2:48254585-48254604 | Msa1060350:intron | 30.0% | |
| CTTGATCTTTATTGAATGCT+AGG | - | chr7_2:48254639-48254658 | None:intergenic | 30.0% | |
| CAAAACAAACTTTGACAGAA+TGG | + | chr7_2:48254850-48254869 | Msa1060350:three_prime_UTR | 30.0% | |
| ! | AATGACATTTTCTATTGCAC+AGG | + | chr7_2:48254957-48254976 | Msa1060350:three_prime_UTR | 30.0% |
| TCAATTTCGTTCACCCAATT+CGG | + | chr7_2:48248112-48248131 | Msa1060350:CDS | 35.0% | |
| CACAGGAAAAAACAATTGCA+AGG | - | chr7_2:48248388-48248407 | None:intergenic | 35.0% | |
| !!! | CTTGCAATTGTTTTTTCCTG+TGG | + | chr7_2:48248386-48248405 | Msa1060350:intron | 35.0% |
| ! | TCAATACTAGAGTTTTCCAC+AGG | - | chr7_2:48248405-48248424 | None:intergenic | 35.0% |
| !!! | AGTTAGTGTAAGGGCATTTT+GGG | - | chr7_2:48248492-48248511 | None:intergenic | 35.0% |
| AACACGACATCAACAAATTG+AGG | + | chr7_2:48248675-48248694 | Msa1060350:intron | 35.0% | |
| ! | TTTGGAGCAGTAGTCAAAAT+AGG | - | chr7_2:48248711-48248730 | None:intergenic | 35.0% |
| AATACGTTAGTTGTGGTTGT+GGG | - | chr7_2:48248983-48249002 | None:intergenic | 35.0% | |
| AAATACGTTAGTTGTGGTTG+TGG | - | chr7_2:48248984-48249003 | None:intergenic | 35.0% | |
| TCTTGCAAATACGTTAGTTG+TGG | - | chr7_2:48248990-48249009 | None:intergenic | 35.0% | |
| GCAATGAGTTTAATTGTGAG+TGG | - | chr7_2:48249287-48249306 | None:intergenic | 35.0% | |
| CATTTCAACTGTCTATACAG+TGG | - | chr7_2:48249330-48249349 | None:intergenic | 35.0% | |
| TGATCATGAGAACGTTGAAA+TGG | + | chr7_2:48249476-48249495 | Msa1060350:intron | 35.0% | |
| CATTAAAATGGTGAACGGTT+AGG | - | chr7_2:48249573-48249592 | None:intergenic | 35.0% | |
| ! | CTAACCGTTCACCATTTTAA+TGG | + | chr7_2:48249571-48249590 | Msa1060350:intron | 35.0% |
| CATGCCATTAAAATGGTGAA+CGG | - | chr7_2:48249578-48249597 | None:intergenic | 35.0% | |
| !! | GTTCACCATTTTAATGGCAT+GGG | + | chr7_2:48249577-48249596 | Msa1060350:intron | 35.0% |
| GAAAACCCATGCCATTAAAA+TGG | - | chr7_2:48249585-48249604 | None:intergenic | 35.0% | |
| GTTGAATTCACATTCATGGA+TGG | + | chr7_2:48249620-48249639 | Msa1060350:intron | 35.0% | |
| TTCTTTACAAGTACGGAAGA+AGG | + | chr7_2:48250107-48250126 | Msa1060350:intron | 35.0% | |
| ATGGATAACAAAGACTCAGT+TGG | + | chr7_2:48250136-48250155 | Msa1060350:intron | 35.0% | |
| TGGATAACAAAGACTCAGTT+GGG | + | chr7_2:48250137-48250156 | Msa1060350:intron | 35.0% | |
| !! | GTGGTATTGACTTGAGATTT+GGG | + | chr7_2:48250216-48250235 | Msa1060350:intron | 35.0% |
| ! | TTGAATCTGAAACCTTAAGG+AGG | - | chr7_2:48250247-48250266 | None:intergenic | 35.0% |
| GTTTCAGATTCAATTCTCTC+CGG | + | chr7_2:48250254-48250273 | Msa1060350:intron | 35.0% | |
| ATACGTTGTGGTTACATGAT+CGG | + | chr7_2:48250375-48250394 | Msa1060350:intron | 35.0% | |
| !! | AGAGTTTACGTTCTAAAGCA+CGG | + | chr7_2:48250411-48250430 | Msa1060350:intron | 35.0% |
| CATTGTCGCTCTATTTGATT+TGG | - | chr7_2:48250845-48250864 | None:intergenic | 35.0% | |
| AAGAAATGAAGTGAAGTACG+AGG | + | chr7_2:48250968-48250987 | Msa1060350:intron | 35.0% | |
| ! | CCTCATTGATTAATGTCTAG+TGG | - | chr7_2:48251151-48251170 | None:intergenic | 35.0% |
| CCACTAGACATTAATCAATG+AGG | + | chr7_2:48251148-48251167 | Msa1060350:intron | 35.0% | |
| ! | TAGATCAAAGTACCAAGAGA+AGG | + | chr7_2:48251212-48251231 | Msa1060350:intron | 35.0% |
| ATATTGTTTGCACCTTCTCT+TGG | - | chr7_2:48251227-48251246 | None:intergenic | 35.0% | |
| ! | AAGAGAAGGTGCAAACAATA+TGG | + | chr7_2:48251226-48251245 | Msa1060350:intron | 35.0% |
| TTGGTATAGTCCCAACATTA+TGG | + | chr7_2:48251330-48251349 | Msa1060350:intron | 35.0% | |
| TAAGTCACTCGAGAAATTTG+TGG | + | chr7_2:48251371-48251390 | Msa1060350:intron | 35.0% | |
| AAAATTTACTAGCGTCCAGA+CGG | - | chr7_2:48251787-48251806 | None:intergenic | 35.0% | |
| ! | CTGGACGCTAGTAAATTTTA+TGG | + | chr7_2:48251788-48251807 | Msa1060350:intron | 35.0% |
| !! | TTTGGTGTTAAGTGTCTGTT+TGG | + | chr7_2:48251870-48251889 | Msa1060350:intron | 35.0% |
| TGTTAAGTGTCTGTTTGGAT+TGG | + | chr7_2:48251875-48251894 | Msa1060350:intron | 35.0% | |
| GAAGATAAGTCAATCCATAG+AGG | + | chr7_2:48252073-48252092 | Msa1060350:intron | 35.0% | |
| AGTTATTACTAGGTGACTAG+GGG | - | chr7_2:48252133-48252152 | None:intergenic | 35.0% | |
| GAAGTTATTACTAGGTGACT+AGG | - | chr7_2:48252135-48252154 | None:intergenic | 35.0% | |
| CATTTGCCAATATGAAGTGT+CGG | + | chr7_2:48252286-48252305 | Msa1060350:intron | 35.0% | |
| !! | TGAGTGTCACTTCTACAAAT+TGG | - | chr7_2:48252417-48252436 | None:intergenic | 35.0% |
| TTGTAGAAGTGACACTCATT+TGG | + | chr7_2:48252419-48252438 | Msa1060350:intron | 35.0% | |
| TAAAGATTGCTTGACCTAGA+TGG | + | chr7_2:48252616-48252635 | Msa1060350:intron | 35.0% | |
| TTAAGAGTTTGATGCCATCT+AGG | - | chr7_2:48252633-48252652 | None:intergenic | 35.0% | |
| AAAGGATCATATCTTCCAAG+TGG | - | chr7_2:48252834-48252853 | None:intergenic | 35.0% | |
| GAGTTTATGCATTTGTGATG+AGG | + | chr7_2:48252945-48252964 | Msa1060350:intron | 35.0% | |
| !! | ATGAGGCATCCTATTTTGAA+AGG | + | chr7_2:48252962-48252981 | Msa1060350:intron | 35.0% |
| !! | GTAAGCACTTTAAGACTGTT+TGG | + | chr7_2:48253045-48253064 | Msa1060350:intron | 35.0% |
| TTCATTGTTCAACAAGCCTT+AGG | - | chr7_2:48253261-48253280 | None:intergenic | 35.0% | |
| AAGTCACAATTACCATTTCC+GGG | + | chr7_2:48253486-48253505 | Msa1060350:intron | 35.0% | |
| ! | TACAAAGTCTTGTCGAATAG+TGG | + | chr7_2:48253589-48253608 | Msa1060350:intron | 35.0% |
| TCTAGCATCAGCAAAAAGAA+GGG | - | chr7_2:48253764-48253783 | None:intergenic | 35.0% | |
| TTCTAGCATCAGCAAAAAGA+AGG | - | chr7_2:48253765-48253784 | None:intergenic | 35.0% | |
| ! | AAGGATTTCAGTGACTTTTG+TGG | + | chr7_2:48253806-48253825 | Msa1060350:CDS | 35.0% |
| TACTCTACTATGAGTCACTA+TGG | + | chr7_2:48254111-48254130 | Msa1060350:intron | 35.0% | |
| ACTCTACTATGAGTCACTAT+GGG | + | chr7_2:48254112-48254131 | Msa1060350:intron | 35.0% | |
| TAGCATAGGTGTATTCATGT+GGG | - | chr7_2:48254143-48254162 | None:intergenic | 35.0% | |
| ATAGCATAGGTGTATTCATG+TGG | - | chr7_2:48254144-48254163 | None:intergenic | 35.0% | |
| ATCAGCAAGAAAGATAGCAT+AGG | - | chr7_2:48254157-48254176 | None:intergenic | 35.0% | |
| ATCATTATGACCTTTATCCC+TGG | + | chr7_2:48254175-48254194 | Msa1060350:intron | 35.0% | |
| TCATTATGACCTTTATCCCT+GGG | + | chr7_2:48254176-48254195 | Msa1060350:intron | 35.0% | |
| TTATGAATCATGGAATCCCA+GGG | - | chr7_2:48254195-48254214 | None:intergenic | 35.0% | |
| ACATGAATGAACATGGCAAT+TGG | - | chr7_2:48254238-48254257 | None:intergenic | 35.0% | |
| TTCCCAATGGTTAAGACTTT+AGG | + | chr7_2:48254517-48254536 | Msa1060350:intron | 35.0% | |
| !! | TCGCTTTGTTTAGTTATGTG+TGG | + | chr7_2:48255021-48255040 | Msa1060350:three_prime_UTR | 35.0% |
| !! | GAACGAAATTGATGATGGGT+AGG | - | chr7_2:48248104-48248123 | None:intergenic | 40.0% |
| ! | GGGTGAACGAAATTGATGAT+GGG | - | chr7_2:48248108-48248127 | None:intergenic | 40.0% |
| TGGGTGAACGAAATTGATGA+TGG | - | chr7_2:48248109-48248128 | None:intergenic | 40.0% | |
| AAAACTACGAAATTGGAGCG+AGG | - | chr7_2:48248203-48248222 | None:intergenic | 40.0% | |
| AAGAGGTGAAGGGATGTTAA+TGG | + | chr7_2:48248346-48248365 | Msa1060350:intron | 40.0% | |
| AGAGGTGAAGGGATGTTAAT+GGG | + | chr7_2:48248347-48248366 | Msa1060350:intron | 40.0% | |
| !!! | GAGTTAGTGTAAGGGCATTT+TGG | - | chr7_2:48248493-48248512 | None:intergenic | 40.0% |
| GGTCAAGTGAGTTAGTGTAA+GGG | - | chr7_2:48248501-48248520 | None:intergenic | 40.0% | |
| TGGTCAAGTGAGTTAGTGTA+AGG | - | chr7_2:48248502-48248521 | None:intergenic | 40.0% | |
| !! | TGTAGGAGTTTTAGTGTGCA+AGG | - | chr7_2:48248547-48248566 | None:intergenic | 40.0% |
| !! | TTTTAAGTGGTGTATGGCAG+CGG | - | chr7_2:48248571-48248590 | None:intergenic | 40.0% |
| AACATGTTCAGCCATTTGTG+GGG | - | chr7_2:48248800-48248819 | None:intergenic | 40.0% | |
| CAACATGTTCAGCCATTTGT+GGG | - | chr7_2:48248801-48248820 | None:intergenic | 40.0% | |
| TCAACATGTTCAGCCATTTG+TGG | - | chr7_2:48248802-48248821 | None:intergenic | 40.0% | |
| CTATGATCATTGCTTTGCCT+TGG | + | chr7_2:48248874-48248893 | Msa1060350:intron | 40.0% | |
| TACACAGAAAGATGGCGATT+GGG | - | chr7_2:48249215-48249234 | None:intergenic | 40.0% | |
| TTACACAGAAAGATGGCGAT+TGG | - | chr7_2:48249216-48249235 | None:intergenic | 40.0% | |
| AACTGTCTATACAGTGGAAG+AGG | - | chr7_2:48249324-48249343 | None:intergenic | 40.0% | |
| !! | CGTTCACCATTTTAATGGCA+TGG | + | chr7_2:48249576-48249595 | Msa1060350:intron | 40.0% |
| GTACGGAAGAAGGTAATCAA+TGG | + | chr7_2:48250117-48250136 | Msa1060350:intron | 40.0% | |
| AAAGGAAAAACGAACCCACT+TGG | + | chr7_2:48250184-48250203 | Msa1060350:intron | 40.0% | |
| AAGGAAAAACGAACCCACTT+GGG | + | chr7_2:48250185-48250204 | Msa1060350:intron | 40.0% | |
| AATCTCAAGTCAATACCACC+AGG | - | chr7_2:48250215-48250234 | None:intergenic | 40.0% | |
| !! | GGTGGTATTGACTTGAGATT+TGG | + | chr7_2:48250215-48250234 | Msa1060350:intron | 40.0% |
| ! | ATTTGGGATTGTCCTCCTTA+AGG | + | chr7_2:48250232-48250251 | Msa1060350:intron | 40.0% |
| TACGTTGTGGTTACATGATC+GGG | + | chr7_2:48250376-48250395 | Msa1060350:intron | 40.0% | |
| !! | TTTACGTTCTAAAGCACGGA+GGG | + | chr7_2:48250415-48250434 | Msa1060350:intron | 40.0% |
| ! | TTACTTGGGTTTAAGGTGGA+AGG | + | chr7_2:48250797-48250816 | Msa1060350:intron | 40.0% |
| TGTTTATCCTCTTAATGGGG+TGG | + | chr7_2:48250865-48250884 | Msa1060350:intron | 40.0% | |
| ACACCATTCAGACTCTTGAA+GGG | - | chr7_2:48251007-48251026 | None:intergenic | 40.0% | |
| ATGGAAACAAATCCACGTAG+TGG | + | chr7_2:48251245-48251264 | Msa1060350:intron | 40.0% | |
| TGGAAACAAATCCACGTAGT+GGG | + | chr7_2:48251246-48251265 | Msa1060350:intron | 40.0% | |
| ACACCAAACAAAGACCATGA+AGG | - | chr7_2:48251397-48251416 | None:intergenic | 40.0% | |
| TGTTAGCGCAGTAGAAAAAG+CGG | + | chr7_2:48251741-48251760 | Msa1060350:intron | 40.0% | |
| CAGTAGAAAAAGCGGATAGA+CGG | + | chr7_2:48251749-48251768 | Msa1060350:intron | 40.0% | |
| AGTAGAAAAAGCGGATAGAC+GGG | + | chr7_2:48251750-48251769 | Msa1060350:intron | 40.0% | |
| AAATTTACTAGCGTCCAGAC+GGG | - | chr7_2:48251786-48251805 | None:intergenic | 40.0% | |
| CAATCCATAGAGGGACATTA+AGG | + | chr7_2:48252083-48252102 | Msa1060350:intron | 40.0% | |
| AGTTCCTTAATGTCCCTCTA+TGG | - | chr7_2:48252090-48252109 | None:intergenic | 40.0% | |
| CTGCATGGTGCATAATATGT+GGG | + | chr7_2:48252243-48252262 | Msa1060350:intron | 40.0% | |
| TATGTGGGTACTACATAGCT+AGG | + | chr7_2:48252258-48252277 | Msa1060350:intron | 40.0% | |
| ATGTGGGTACTACATAGCTA+GGG | + | chr7_2:48252259-48252278 | Msa1060350:intron | 40.0% | |
| !! | TGATCTTGGATTAGCGAGTT+AGG | + | chr7_2:48252480-48252499 | Msa1060350:intron | 40.0% |
| ! | GATGGCTAGTAACCATTTTC+TGG | + | chr7_2:48252684-48252703 | Msa1060350:intron | 40.0% |
| GAAACATCAACGCCAGAAAA+TGG | - | chr7_2:48252699-48252718 | None:intergenic | 40.0% | |
| AGAGCAATAGTTAGGCTTTC+TGG | - | chr7_2:48253367-48253386 | None:intergenic | 40.0% | |
| ! | AGATAGTTCTGCAGAATGCA+TGG | + | chr7_2:48253416-48253435 | Msa1060350:CDS | 40.0% |
| TATTTGACAATGCCCGGAAA+TGG | - | chr7_2:48253501-48253520 | None:intergenic | 40.0% | |
| ! | ATCTGCTATTTGACAATGCC+CGG | - | chr7_2:48253507-48253526 | None:intergenic | 40.0% |
| ATCACTTATTGCGGAACAAC+AGG | - | chr7_2:48253565-48253584 | None:intergenic | 40.0% | |
| TCGAATAGTGGCTATAACAG+TGG | + | chr7_2:48253601-48253620 | Msa1060350:intron | 40.0% | |
| !!! | ACAGGCAGTTTTTTCAATCG+CGG | - | chr7_2:48253680-48253699 | None:intergenic | 40.0% |
| !! | GAAATCCTTGCTATTGGTCT+TGG | - | chr7_2:48253795-48253814 | None:intergenic | 40.0% |
| ! | GTCACTGAAATCCTTGCTAT+TGG | - | chr7_2:48253801-48253820 | None:intergenic | 40.0% |
| GTTATGAATCATGGAATCCC+AGG | - | chr7_2:48254196-48254215 | None:intergenic | 40.0% | |
| TGCCATGTTCATTCATGTAC+TGG | + | chr7_2:48254240-48254259 | Msa1060350:intron | 40.0% | |
| ! | ATAGCTGCTGTTTGAAACAG+CGG | - | chr7_2:48254350-48254369 | None:intergenic | 40.0% |
| !! | GGGAAACTTGCTGTCAATTA+CGG | - | chr7_2:48254502-48254521 | None:intergenic | 40.0% |
| ATTGACAGCAAGTTTCCCAA+TGG | + | chr7_2:48254504-48254523 | Msa1060350:intron | 40.0% | |
| GTTTGTTCATAGGCTACCAT+AGG | + | chr7_2:48254595-48254614 | Msa1060350:intron | 40.0% | |
| TGCAAAGTATGCAAGTCCTA+TGG | - | chr7_2:48254614-48254633 | None:intergenic | 40.0% | |
| AAAGATCAAGAACCACCTAG+CGG | + | chr7_2:48254649-48254668 | Msa1060350:CDS | 40.0% | |
| CAAAGGATCATCCATAGGTT+TGG | - | chr7_2:48254692-48254711 | None:intergenic | 40.0% | |
| CAAACCTATGGATGATCCTT+TGG | + | chr7_2:48254690-48254709 | Msa1060350:CDS | 40.0% | |
| TCTTCCAAAGGATCATCCAT+AGG | - | chr7_2:48254697-48254716 | None:intergenic | 40.0% | |
| ! | TATGGATGATCCTTTGGAAG+AGG | + | chr7_2:48254696-48254715 | Msa1060350:CDS | 40.0% |
| ! | ATCCTTTGGAAGAGGCTAAT+AGG | + | chr7_2:48254704-48254723 | Msa1060350:CDS | 40.0% |
| ! | ATCCTATTAGCCTCTTCCAA+AGG | - | chr7_2:48254709-48254728 | None:intergenic | 40.0% |
| GGAAGAGGCTAATAGGATAA+TGG | + | chr7_2:48254711-48254730 | Msa1060350:CDS | 40.0% | |
| ATAGCCTTTAACAAAGCCTC+AGG | + | chr7_2:48254929-48254948 | Msa1060350:three_prime_UTR | 40.0% | |
| TAGCCTTTAACAAAGCCTCA+GGG | + | chr7_2:48254930-48254949 | Msa1060350:three_prime_UTR | 40.0% | |
| ! | AAAATGTCATTTGCACCCTG+AGG | - | chr7_2:48254948-48254967 | None:intergenic | 40.0% |
| !!! | GATTGGTTTTAGGTGCACGT+GGG | - | chr7_2:48247964-48247983 | None:intergenic | 45.0% |
| !!! | TGATTGGTTTTAGGTGCACG+TGG | - | chr7_2:48247965-48247984 | None:intergenic | 45.0% |
| ! | CGAAATTGGAGCGAGGTTTT+TGG | - | chr7_2:48248196-48248215 | None:intergenic | 45.0% |
| !! | AGGAGTTTTAGTGTGCAAGG+CGG | - | chr7_2:48248544-48248563 | None:intergenic | 45.0% |
| TGACTACTGCTCCAAATCAG+AGG | + | chr7_2:48248715-48248734 | Msa1060350:intron | 45.0% | |
| !! | GGAAGAGGATGAAGCGTTTT+TGG | - | chr7_2:48249309-48249328 | None:intergenic | 45.0% |
| TACATGAGAGAGAGAGAGAG+AGG | + | chr7_2:48249375-48249394 | Msa1060350:intron | 45.0% | |
| GATTAAACAGGACCACCATC+TGG | + | chr7_2:48249678-48249697 | Msa1060350:intron | 45.0% | |
| ! | TGGCGGACCATTACACAAAA+TGG | - | chr7_2:48249796-48249815 | None:intergenic | 45.0% |
| ! | ATTCTCTCCGGTGCCAAAAT+AGG | + | chr7_2:48250266-48250285 | Msa1060350:intron | 45.0% |
| !!! | TAACCCACCTATTTTGGCAC+CGG | - | chr7_2:48250276-48250295 | None:intergenic | 45.0% |
| !! | GTTTACGTTCTAAAGCACGG+AGG | + | chr7_2:48250414-48250433 | Msa1060350:intron | 45.0% |
| AACAAAGCCACCCCATTAAG+AGG | - | chr7_2:48250875-48250894 | None:intergenic | 45.0% | |
| TGAAGTGAAGTACGAGGAAG+AGG | + | chr7_2:48250974-48250993 | Msa1060350:intron | 45.0% | |
| ACCATTCAGACTCTTGAAGG+GGG | - | chr7_2:48251005-48251024 | None:intergenic | 45.0% | |
| CACCATTCAGACTCTTGAAG+GGG | - | chr7_2:48251006-48251025 | None:intergenic | 45.0% | |
| GACACCATTCAGACTCTTGA+AGG | - | chr7_2:48251008-48251027 | None:intergenic | 45.0% | |
| ATATTCATCCCCGCACTACT+TGG | - | chr7_2:48251281-48251300 | None:intergenic | 45.0% | |
| CGAGAAATTTGTGGCCTTCA+TGG | + | chr7_2:48251380-48251399 | Msa1060350:intron | 45.0% | |
| TGGCCTTCATGGTCTTTGTT+TGG | + | chr7_2:48251391-48251410 | Msa1060350:intron | 45.0% | |
| CCACATATTATGCACCATGC+AGG | - | chr7_2:48252245-48252264 | None:intergenic | 45.0% | |
| CCTGCATGGTGCATAATATG+TGG | + | chr7_2:48252242-48252261 | Msa1060350:intron | 45.0% | |
| TGTGGGTACTACATAGCTAG+GGG | + | chr7_2:48252260-48252279 | Msa1060350:intron | 45.0% | |
| !! | GTAGCACCGACACTTCATAT+TGG | - | chr7_2:48252295-48252314 | None:intergenic | 45.0% |
| !! | AGTGTCGGTGCTACATAGTT+AGG | + | chr7_2:48252301-48252320 | Msa1060350:intron | 45.0% |
| !! | GTGTCGGTGCTACATAGTTA+GGG | + | chr7_2:48252302-48252321 | Msa1060350:intron | 45.0% |
| GTCATCGACACACGAAAACT+AGG | - | chr7_2:48252812-48252831 | None:intergenic | 45.0% | |
| !! | GAATGCATGGAGAGTTGGTA+AGG | + | chr7_2:48253429-48253448 | Msa1060350:CDS | 45.0% |
| GGTAAGGATGGAATTGATGC+AGG | + | chr7_2:48253445-48253464 | Msa1060350:CDS | 45.0% | |
| GTTATAGCACTGCAGTGTAG+CGG | + | chr7_2:48253625-48253644 | Msa1060350:intron | 45.0% | |
| CAATCGCGGATCACAGAAAA+TGG | - | chr7_2:48253666-48253685 | None:intergenic | 45.0% | |
| CTGTACCAAGACCAATAGCA+AGG | + | chr7_2:48253787-48253806 | Msa1060350:CDS | 45.0% | |
| TCATGGAATCCCAGGGATAA+AGG | - | chr7_2:48254188-48254207 | None:intergenic | 45.0% | |
| GGCCAGTACATGAATGAACA+TGG | - | chr7_2:48254245-48254264 | None:intergenic | 45.0% | |
| AAGATCAAGAACCACCTAGC+GGG | + | chr7_2:48254650-48254669 | Msa1060350:CDS | 45.0% | |
| AGGAACTACGACCAAACCTA+TGG | + | chr7_2:48254678-48254697 | Msa1060350:CDS | 45.0% | |
| !! | GTTTTAGGTGCACGTGGGAA+TGG | - | chr7_2:48247959-48247978 | None:intergenic | 50.0% |
| !!! | GGAGCGAGGTTTTTGGCTTT+TGG | - | chr7_2:48248189-48248208 | None:intergenic | 50.0% |
| ! | TCTCCGGTGCCAAAATAGGT+GGG | + | chr7_2:48250270-48250289 | Msa1060350:intron | 50.0% |
| ACGAGGCATGTGATACGTTG+TGG | + | chr7_2:48250363-48250382 | Msa1060350:intron | 50.0% | |
| ACCCCCTTCAAGAGTCTGAA+TGG | + | chr7_2:48251001-48251020 | Msa1060350:intron | 50.0% | |
| ! | ATCCACGTAGTGGGATGAGA+AGG | + | chr7_2:48251255-48251274 | Msa1060350:intron | 50.0% |
| GATGAGAAGGCCAAGTAGTG+CGG | + | chr7_2:48251268-48251287 | Msa1060350:intron | 50.0% | |
| ATGAGAAGGCCAAGTAGTGC+GGG | + | chr7_2:48251269-48251288 | Msa1060350:intron | 50.0% | |
| AAAAAGCGGATAGACGGGCA+CGG | + | chr7_2:48251755-48251774 | Msa1060350:intron | 50.0% | |
| ACACGACACTCACACGTAGA+CGG | + | chr7_2:48252200-48252219 | Msa1060350:intron | 50.0% | |
| ! | TTCGTGTGTCGATGACCACT+TGG | + | chr7_2:48252816-48252835 | Msa1060350:intron | 50.0% |
| CTGCAGAATGCATGGAGAGT+TGG | + | chr7_2:48253424-48253443 | Msa1060350:CDS | 50.0% | |
| !! | GCATGGAGAGTTGGTAAGGA+TGG | + | chr7_2:48253433-48253452 | Msa1060350:CDS | 50.0% |
| !! | GCACCCTGAGGCTTTGTTAA+AGG | - | chr7_2:48254936-48254955 | None:intergenic | 50.0% |
| !!! | TAACCAGCGCCGTTTTTCCA+CGG | + | chr7_2:48255108-48255127 | Msa1060350:three_prime_UTR | 50.0% |
| TCCAAGCACCCGTGGAAAAA+CGG | - | chr7_2:48255120-48255139 | None:intergenic | 50.0% | |
| TGGTGTATGGCAGCGGTTGT+AGG | - | chr7_2:48248564-48248583 | None:intergenic | 55.0% | |
| ACCACCAGGCTAACCCAAGT+GGG | - | chr7_2:48250201-48250220 | None:intergenic | 55.0% | |
| TACCACCAGGCTAACCCAAG+TGG | - | chr7_2:48250202-48250221 | None:intergenic | 55.0% | |
| ! | CTCTCCGGTGCCAAAATAGG+TGG | + | chr7_2:48250269-48250288 | Msa1060350:intron | 55.0% |
| TGAGAAGGCCAAGTAGTGCG+GGG | + | chr7_2:48251270-48251289 | Msa1060350:intron | 55.0% | |
| AAAAGCGGATAGACGGGCAC+GGG | + | chr7_2:48251756-48251775 | Msa1060350:intron | 55.0% | |
| GTGGCGTTGCTTGCTTCACT+GGG | - | chr7_2:48252173-48252192 | None:intergenic | 55.0% | |
| TGTGGCGTTGCTTGCTTCAC+TGG | - | chr7_2:48252174-48252193 | None:intergenic | 55.0% | |
| ! | TGAGTGTCGTGTCAGGTGTG+TGG | - | chr7_2:48252192-48252211 | None:intergenic | 55.0% |
| ! | CTACGTGTGAGTGTCGTGTC+AGG | - | chr7_2:48252199-48252218 | None:intergenic | 55.0% |
| CACGACACTCACACGTAGAC+GGG | + | chr7_2:48252201-48252220 | Msa1060350:intron | 55.0% | |
| ! | CACTCACACGTAGACGGGTT+TGG | + | chr7_2:48252206-48252225 | Msa1060350:intron | 55.0% |
| ! | AGACGGGTTTGGATCCCCTA+TGG | + | chr7_2:48252217-48252236 | Msa1060350:intron | 55.0% |
| ! | TGCACCATGCAGGTGCCATA+GGG | - | chr7_2:48252235-48252254 | None:intergenic | 55.0% |
| ! | ATGCACCATGCAGGTGCCAT+AGG | - | chr7_2:48252236-48252255 | None:intergenic | 55.0% |
| CAAGAACCACCTAGCGGGAA+TGG | + | chr7_2:48254655-48254674 | Msa1060350:CDS | 55.0% | |
| GTAGTTCCTCCATTCCCGCT+AGG | - | chr7_2:48254667-48254686 | None:intergenic | 55.0% | |
| !!! | AACCAGCGCCGTTTTTCCAC+GGG | + | chr7_2:48255109-48255128 | Msa1060350:three_prime_UTR | 55.0% |
| GGTGCACGTGGGAATGGAAG+AGG | - | chr7_2:48247953-48247972 | None:intergenic | 60.0% | |
| !! | CGAACCCACTTGGGTTAGCC+TGG | + | chr7_2:48250194-48250213 | Msa1060350:intron | 60.0% |
| !! | ACCCACTTGGGTTAGCCTGG+TGG | + | chr7_2:48250197-48250216 | Msa1060350:intron | 60.0% |
| GGCCTTCTCATCCCACTACG+TGG | - | chr7_2:48251260-48251279 | None:intergenic | 60.0% | |
| GATCCCCTATGGCACCTGCA+TGG | + | chr7_2:48252228-48252247 | Msa1060350:intron | 60.0% | |
| ! | GCACCATGCAGGTGCCATAG+GGG | - | chr7_2:48252234-48252253 | None:intergenic | 60.0% |
| GAACCACCTAGCGGGAATGG+AGG | + | chr7_2:48254658-48254677 | Msa1060350:CDS | 60.0% | |
| GTTCCTCCATTCCCGCTAGG+TGG | - | chr7_2:48254664-48254683 | None:intergenic | 60.0% | |
| !!! | GCCGTTTTTCCACGGGTGCT+TGG | + | chr7_2:48255116-48255135 | Msa1060350:three_prime_UTR | 60.0% |
| CACCCGTGGAAAAACGGCGC+TGG | - | chr7_2:48255114-48255133 | None:intergenic | 65.0% | |
| CTGCTCGTTCCAAGCACCCG+TGG | - | chr7_2:48255128-48255147 | None:intergenic | 65.0% | |
| !!! | CGGGCACGGGAGTGCCCGTC+TGG | + | chr7_2:48251769-48251788 | Msa1060350:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 48247892 | 48255152 | 48247892 | ID=Msa1060350;Name=Msa1060350 |
| chr7_2 | mRNA | 48247892 | 48255152 | 48247892 | ID=Msa1060350-mRNA-1;Parent=Msa1060350;Name=Msa1060350-mRNA-1;_AED=0.17;_eAED=0.17;_QI=140|0.66|0.75|1|1|1|4|405|192 |
| chr7_2 | exon | 48247892 | 48248248 | 48247892 | ID=Msa1060350-mRNA-1:exon:8714;Parent=Msa1060350-mRNA-1 |
| chr7_2 | exon | 48253368 | 48253483 | 48253368 | ID=Msa1060350-mRNA-1:exon:8715;Parent=Msa1060350-mRNA-1 |
| chr7_2 | exon | 48253783 | 48253887 | 48253783 | ID=Msa1060350-mRNA-1:exon:8716;Parent=Msa1060350-mRNA-1 |
| chr7_2 | exon | 48254607 | 48255152 | 48254607 | ID=Msa1060350-mRNA-1:exon:8717;Parent=Msa1060350-mRNA-1 |
| chr7_2 | five_prime_UTR | 48247892 | 48248031 | 48247892 | ID=Msa1060350-mRNA-1:five_prime_utr;Parent=Msa1060350-mRNA-1 |
| chr7_2 | CDS | 48248032 | 48248248 | 48248032 | ID=Msa1060350-mRNA-1:cds;Parent=Msa1060350-mRNA-1 |
| chr7_2 | CDS | 48253368 | 48253483 | 48253368 | ID=Msa1060350-mRNA-1:cds;Parent=Msa1060350-mRNA-1 |
| chr7_2 | CDS | 48253783 | 48253887 | 48253783 | ID=Msa1060350-mRNA-1:cds;Parent=Msa1060350-mRNA-1 |
| chr7_2 | CDS | 48254607 | 48254747 | 48254607 | ID=Msa1060350-mRNA-1:cds;Parent=Msa1060350-mRNA-1 |
| chr7_2 | three_prime_UTR | 48254748 | 48255152 | 48254748 | ID=Msa1060350-mRNA-1:three_prime_utr;Parent=Msa1060350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
