Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417270 | sp|Q8GW96|AATP3_ARATH | 44.350 | 469 | 217 | 8 | 25 | 481 | 17 | 453 | 3.83e-133 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417270 | G7KF10 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1417270 | -0.835426 | 1.690201e-56 | -8.615850e-47 |
| Msa0027020 | Msa1417270 | -0.802113 | 6.544888e-49 | -8.615850e-47 |
| Msa0042210 | Msa1417270 | -0.805566 | 1.254685e-49 | -8.615850e-47 |
| Msa0047560 | Msa1417270 | -0.810006 | 1.428476e-50 | -8.615850e-47 |
| Msa0052180 | Msa1417270 | -0.814095 | 1.833923e-51 | -8.615850e-47 |
| Msa0065520 | Msa1417270 | -0.817605 | 3.023189e-52 | -8.615850e-47 |
| Msa0075080 | Msa1417270 | -0.835661 | 1.473510e-56 | -8.615850e-47 |
| Msa0075820 | Msa1417270 | -0.803930 | 2.755269e-49 | -8.615850e-47 |
| Msa0076590 | Msa1417270 | -0.815350 | 9.670670e-52 | -8.615850e-47 |
| Msa0078160 | Msa1417270 | -0.808649 | 2.791784e-50 | -8.615850e-47 |
| Msa0078170 | Msa1417270 | -0.804807 | 1.808910e-49 | -8.615850e-47 |
| Msa0086620 | Msa1417270 | -0.800439 | 1.440499e-48 | -8.615850e-47 |
| Msa0093360 | Msa1417270 | -0.819622 | 1.054485e-52 | -8.615850e-47 |
| Msa0095890 | Msa1417270 | -0.833674 | 4.657597e-56 | -8.615850e-47 |
| Msa0097220 | Msa1417270 | -0.809567 | 1.775657e-50 | -8.615850e-47 |
| Msa0120100 | Msa1417270 | -0.821538 | 3.829260e-53 | -8.615850e-47 |
| Msa0120160 | Msa1417270 | -0.815207 | 1.040592e-51 | -8.615850e-47 |
| Msa1350590 | Msa1417270 | -0.806633 | 7.482105e-50 | -8.615850e-47 |
| Msa1363170 | Msa1417270 | -0.808310 | 3.298341e-50 | -8.615850e-47 |
| Msa1375120 | Msa1417270 | -0.805433 | 1.338137e-49 | -8.615850e-47 |
| Msa1375650 | Msa1417270 | -0.814190 | 1.747999e-51 | -8.615850e-47 |
| Msa1376510 | Msa1417270 | -0.803167 | 3.967480e-49 | -8.615850e-47 |
| Msa1379000 | Msa1417270 | 0.997874 | 4.945788e-251 | -8.615850e-47 |
| Msa1379270 | Msa1417270 | -0.803399 | 3.551051e-49 | -8.615850e-47 |
| Msa1381060 | Msa1417270 | -0.802445 | 5.591009e-49 | -8.615850e-47 |
| Msa1395380 | Msa1417270 | -0.801710 | 7.919477e-49 | -8.615850e-47 |
| Msa1407900 | Msa1417270 | 0.952204 | 4.008629e-110 | -8.615850e-47 |
| Msa1408230 | Msa1417270 | -0.806789 | 6.936922e-50 | -8.615850e-47 |
| Msa1412330 | Msa1417270 | -0.832716 | 8.063419e-56 | -8.615850e-47 |
| Msa1412810 | Msa1417270 | -0.803080 | 4.134414e-49 | -8.615850e-47 |
| Msa1417270 | Msa1429180 | -0.801833 | 7.470695e-49 | -8.615850e-47 |
| Msa1417270 | Msa1432360 | 0.826610 | 2.468310e-54 | -8.615850e-47 |
| Msa1417270 | Msa1439000 | -0.807638 | 4.582834e-50 | -8.615850e-47 |
| Msa1417270 | Msa1460340 | -0.811336 | 7.368508e-51 | -8.615850e-47 |
| Msa1417270 | Msa1462700 | -0.810180 | 1.310465e-50 | -8.615850e-47 |
| Msa0608720 | Msa1417270 | -0.802030 | 6.806568e-49 | -8.615850e-47 |
| Msa0615460 | Msa1417270 | -0.827930 | 1.191424e-54 | -8.615850e-47 |
| Msa0616570 | Msa1417270 | -0.809120 | 2.213992e-50 | -8.615850e-47 |
| Msa0619960 | Msa1417270 | -0.801622 | 8.255241e-49 | -8.615850e-47 |
| Msa0622450 | Msa1417270 | -0.814498 | 1.493977e-51 | -8.615850e-47 |
| Msa0644220 | Msa1417270 | -0.828158 | 1.049982e-54 | -8.615850e-47 |
| Msa0654560 | Msa1417270 | -0.821922 | 3.121054e-53 | -8.615850e-47 |
| Msa0654850 | Msa1417270 | -0.816784 | 4.625197e-52 | -8.615850e-47 |
| Msa0655980 | Msa1417270 | -0.802479 | 5.501439e-49 | -8.615850e-47 |
| Msa0681100 | Msa1417270 | -0.812683 | 3.747928e-51 | -8.615850e-47 |
| Msa0684030 | Msa1417270 | -0.827082 | 1.904299e-54 | -8.615850e-47 |
| Msa0698510 | Msa1417270 | -0.828442 | 8.971031e-55 | -8.615850e-47 |
| Msa0698680 | Msa1417270 | -0.821594 | 3.715792e-53 | -8.615850e-47 |
| Msa0699900 | Msa1417270 | -0.811405 | 7.119070e-51 | -8.615850e-47 |
| Msa0713570 | Msa1417270 | -0.802593 | 5.212856e-49 | -8.615850e-47 |
| Msa0739820 | Msa1417270 | -0.806630 | 7.494573e-50 | -8.615850e-47 |
| Msa0745010 | Msa1417270 | -0.814752 | 1.312680e-51 | -8.615850e-47 |
| Msa0750200 | Msa1417270 | -0.825679 | 4.110910e-54 | -8.615850e-47 |
| Msa0751490 | Msa1417270 | -0.802431 | 5.630086e-49 | -8.615850e-47 |
| Msa0753590 | Msa1417270 | -0.852011 | 6.104928e-61 | -8.615850e-47 |
| Msa0755550 | Msa1417270 | -0.803478 | 3.419875e-49 | -8.615850e-47 |
| Msa0784780 | Msa1417270 | -0.802077 | 6.656737e-49 | -8.615850e-47 |
| Msa0793270 | Msa1417270 | 0.803674 | 3.113847e-49 | -8.615850e-47 |
| Msa0793530 | Msa1417270 | -0.800600 | 1.335935e-48 | -8.615850e-47 |
| Msa0794900 | Msa1417270 | -0.809421 | 1.907663e-50 | -8.615850e-47 |
| Msa0810420 | Msa1417270 | 0.996257 | 2.844628e-225 | -8.615850e-47 |
| Msa0817880 | Msa1417270 | -0.802464 | 5.542516e-49 | -8.615850e-47 |
| Msa0833200 | Msa1417270 | -0.832686 | 8.203925e-56 | -8.615850e-47 |
| Msa0835050 | Msa1417270 | -0.805818 | 1.110829e-49 | -8.615850e-47 |
| Msa0122930 | Msa1417270 | -0.841876 | 3.642100e-58 | -8.615850e-47 |
| Msa0167570 | Msa1417270 | -0.829210 | 5.845959e-55 | -8.615850e-47 |
| Msa0181560 | Msa1417270 | -0.803122 | 4.053380e-49 | -8.615850e-47 |
| Msa0184900 | Msa1417270 | -0.801557 | 8.510467e-49 | -8.615850e-47 |
| Msa0185540 | Msa1417270 | -0.827702 | 1.352116e-54 | -8.615850e-47 |
| Msa0211590 | Msa1417270 | -0.806037 | 9.990150e-50 | -8.615850e-47 |
| Msa0213590 | Msa1417270 | -0.804833 | 1.786478e-49 | -8.615850e-47 |
| Msa0224180 | Msa1417270 | -0.807718 | 4.408694e-50 | -8.615850e-47 |
| Msa0225080 | Msa1417270 | -0.803395 | 3.558253e-49 | -8.615850e-47 |
| Msa1228260 | Msa1417270 | -0.802001 | 6.901580e-49 | -8.615850e-47 |
| Msa1266750 | Msa1417270 | -0.801157 | 1.028067e-48 | -8.615850e-47 |
| Msa1269730 | Msa1417270 | -0.826365 | 2.823543e-54 | -8.615850e-47 |
| Msa1271220 | Msa1417270 | -0.800564 | 1.358638e-48 | -8.615850e-47 |
| Msa1297490 | Msa1417270 | -0.806840 | 6.766925e-50 | -8.615850e-47 |
| Msa1297550 | Msa1417270 | -0.815095 | 1.101643e-51 | -8.615850e-47 |
| Msa1303690 | Msa1417270 | -0.804797 | 1.817846e-49 | -8.615850e-47 |
| Msa1325260 | Msa1417270 | -0.822526 | 2.260056e-53 | -8.615850e-47 |
| Msa1330080 | Msa1417270 | -0.802425 | 5.644235e-49 | -8.615850e-47 |
| Msa1341710 | Msa1417270 | -0.802143 | 6.451840e-49 | -8.615850e-47 |
| Msa0367380 | Msa1417270 | -0.810035 | 1.408103e-50 | -8.615850e-47 |
| Msa0367600 | Msa1417270 | -0.813840 | 2.088192e-51 | -8.615850e-47 |
| Msa0375570 | Msa1417270 | -0.804464 | 2.133231e-49 | -8.615850e-47 |
| Msa0377990 | Msa1417270 | -0.802810 | 4.700423e-49 | -8.615850e-47 |
| Msa0380470 | Msa1417270 | -0.811717 | 6.088898e-51 | -8.615850e-47 |
| Msa0382020 | Msa1417270 | -0.804592 | 2.005845e-49 | -8.615850e-47 |
| Msa0382050 | Msa1417270 | -0.830841 | 2.339724e-55 | -8.615850e-47 |
| Msa0386230 | Msa1417270 | -0.811197 | 7.895666e-51 | -8.615850e-47 |
| Msa0390760 | Msa1417270 | -0.805205 | 1.493619e-49 | -8.615850e-47 |
| Msa0393880 | Msa1417270 | -0.820891 | 5.397011e-53 | -8.615850e-47 |
| Msa0397420 | Msa1417270 | -0.805369 | 1.380375e-49 | -8.615850e-47 |
| Msa0415210 | Msa1417270 | -0.801811 | 7.551197e-49 | -8.615850e-47 |
| Msa0424220 | Msa1417270 | -0.814131 | 1.800907e-51 | -8.615850e-47 |
| Msa0425810 | Msa1417270 | -0.800283 | 1.549934e-48 | -8.615850e-47 |
| Msa0427600 | Msa1417270 | -0.800591 | 1.341472e-48 | -8.615850e-47 |
| Msa0428280 | Msa1417270 | -0.820907 | 5.351598e-53 | -8.615850e-47 |
| Msa0428300 | Msa1417270 | -0.813502 | 2.477806e-51 | -8.615850e-47 |
| Msa0429990 | Msa1417270 | -0.810291 | 1.239872e-50 | -8.615850e-47 |
| Msa0431270 | Msa1417270 | -0.806986 | 6.302278e-50 | -8.615850e-47 |
| Msa0431550 | Msa1417270 | -0.831621 | 1.504975e-55 | -8.615850e-47 |
| Msa0436660 | Msa1417270 | -0.801704 | 7.943054e-49 | -8.615850e-47 |
| Msa0439090 | Msa1417270 | -0.804297 | 2.311060e-49 | -8.615850e-47 |
| Msa0446110 | Msa1417270 | -0.809298 | 2.027594e-50 | -8.615850e-47 |
| Msa0471130 | Msa1417270 | -0.801282 | 9.691082e-49 | -8.615850e-47 |
| Msa0472570 | Msa1417270 | -0.802678 | 5.005054e-49 | -8.615850e-47 |
| Msa0473740 | Msa1417270 | -0.800517 | 1.388680e-48 | -8.615850e-47 |
| Msa0474630 | Msa1417270 | -0.822959 | 1.791436e-53 | -8.615850e-47 |
| Msa0474660 | Msa1417270 | -0.803934 | 2.750291e-49 | -8.615850e-47 |
| Msa0476140 | Msa1417270 | -0.821230 | 4.509418e-53 | -8.615850e-47 |
| Msa0476560 | Msa1417270 | -0.831623 | 1.502825e-55 | -8.615850e-47 |
| Msa0479890 | Msa1417270 | -0.802286 | 6.028613e-49 | -8.615850e-47 |
| Msa0985570 | Msa1417270 | -0.805857 | 1.089960e-49 | -8.615850e-47 |
| Msa1002550 | Msa1417270 | -0.827400 | 1.597403e-54 | -8.615850e-47 |
| Msa1027910 | Msa1417270 | 0.800800 | 1.215987e-48 | -8.615850e-47 |
| Msa1028890 | Msa1417270 | -0.816075 | 6.665662e-52 | -8.615850e-47 |
| Msa1031190 | Msa1417270 | -0.810894 | 9.186665e-51 | -8.615850e-47 |
| Msa1036260 | Msa1417270 | -0.821759 | 3.404125e-53 | -8.615850e-47 |
| Msa1037440 | Msa1417270 | -0.808731 | 2.681116e-50 | -8.615850e-47 |
| Msa1045750 | Msa1417270 | -0.809005 | 2.342726e-50 | -8.615850e-47 |
| Msa1058280 | Msa1417270 | 0.823354 | 1.449327e-53 | -8.615850e-47 |
| Msa1058550 | Msa1417270 | -0.812393 | 4.335841e-51 | -8.615850e-47 |
| Msa1068010 | Msa1417270 | -0.814765 | 1.303856e-51 | -8.615850e-47 |
| Msa1070370 | Msa1417270 | -0.810831 | 9.479558e-51 | -8.615850e-47 |
| Msa1078120 | Msa1417270 | -0.819012 | 1.451804e-52 | -8.615850e-47 |
| Msa1091400 | Msa1417270 | -0.815674 | 8.192508e-52 | -8.615850e-47 |
| Msa1095880 | Msa1417270 | -0.811361 | 7.275736e-51 | -8.615850e-47 |
| Msa0266330 | Msa1417270 | -0.812608 | 3.891983e-51 | -8.615850e-47 |
| Msa0341950 | Msa1417270 | -0.814472 | 1.514239e-51 | -8.615850e-47 |
| Msa0347280 | Msa1417270 | -0.807580 | 4.714991e-50 | -8.615850e-47 |
| Msa1119420 | Msa1417270 | -0.806389 | 8.425000e-50 | -8.615850e-47 |
| Msa1121920 | Msa1417270 | -0.803484 | 3.409612e-49 | -8.615850e-47 |
| Msa1122710 | Msa1417270 | -0.801067 | 1.072468e-48 | -8.615850e-47 |
| Msa1130150 | Msa1417270 | -0.825410 | 4.758802e-54 | -8.615850e-47 |
| Msa1134800 | Msa1417270 | -0.804242 | 2.373667e-49 | -8.615850e-47 |
| Msa1137210 | Msa1417270 | 0.812671 | 3.770916e-51 | -8.615850e-47 |
| Msa1156100 | Msa1417270 | -0.819846 | 9.370998e-53 | -8.615850e-47 |
| Msa1156430 | Msa1417270 | -0.806913 | 6.528991e-50 | -8.615850e-47 |
| Msa1158180 | Msa1417270 | -0.808202 | 3.476940e-50 | -8.615850e-47 |
| Msa1161060 | Msa1417270 | -0.805006 | 1.643818e-49 | -8.615850e-47 |
| Msa1162870 | Msa1417270 | 0.807120 | 5.902401e-50 | -8.615850e-47 |
| Msa1190670 | Msa1417270 | -0.807003 | 6.249253e-50 | -8.615850e-47 |
| Msa1191530 | Msa1417270 | -0.800694 | 1.278154e-48 | -8.615850e-47 |
| Msa1199700 | Msa1417270 | -0.800356 | 1.497761e-48 | -8.615850e-47 |
| Msa1203320 | Msa1417270 | -0.814714 | 1.338658e-51 | -8.615850e-47 |
| Msa0484590 | Msa1417270 | -0.812056 | 5.135985e-51 | -8.615850e-47 |
| Msa0487480 | Msa1417270 | -0.810504 | 1.115490e-50 | -8.615850e-47 |
| Msa0489330 | Msa1417270 | -0.807904 | 4.024629e-50 | -8.615850e-47 |
| Msa0492330 | Msa1417270 | -0.823859 | 1.104101e-53 | -8.615850e-47 |
| Msa0500580 | Msa1417270 | -0.816120 | 6.514081e-52 | -8.615850e-47 |
| Msa0506700 | Msa1417270 | -0.815778 | 7.765496e-52 | -8.615850e-47 |
| Msa0519070 | Msa1417270 | -0.811070 | 8.413297e-51 | -8.615850e-47 |
| Msa0519090 | Msa1417270 | -0.827730 | 1.331206e-54 | -8.615850e-47 |
| Msa0519100 | Msa1417270 | -0.826753 | 2.281947e-54 | -8.615850e-47 |
| Msa0523600 | Msa1417270 | -0.801141 | 1.035459e-48 | -8.615850e-47 |
| Msa0528180 | Msa1417270 | 0.812950 | 3.275964e-51 | -8.615850e-47 |
| Msa0558570 | Msa1417270 | 0.817799 | 2.733457e-52 | -8.615850e-47 |
| Msa0561450 | Msa1417270 | -0.814584 | 1.430188e-51 | -8.615850e-47 |
| Msa0580890 | Msa1417270 | -0.809958 | 1.463153e-50 | -8.615850e-47 |
| Msa0858250 | Msa1417270 | -0.802525 | 5.383169e-49 | -8.615850e-47 |
| Msa0868500 | Msa1417270 | -0.823802 | 1.138392e-53 | -8.615850e-47 |
| Msa0868510 | Msa1417270 | -0.812598 | 3.911781e-51 | -8.615850e-47 |
| Msa0868520 | Msa1417270 | -0.803229 | 3.851811e-49 | -8.615850e-47 |
| Msa0882480 | Msa1417270 | -0.800605 | 1.332776e-48 | -8.615850e-47 |
| Msa0935840 | Msa1417270 | -0.824603 | 7.381077e-54 | -8.615850e-47 |
| Msa0941410 | Msa1417270 | -0.810628 | 1.048679e-50 | -8.615850e-47 |
| Msa0941420 | Msa1417270 | -0.802575 | 5.256685e-49 | -8.615850e-47 |
| Msa0958960 | Msa1417270 | -0.821381 | 4.161077e-53 | -8.615850e-47 |
| Msa0973010 | Msa1417270 | -0.831593 | 1.528822e-55 | -8.615850e-47 |
| Msa0978540 | Msa1417270 | -0.807414 | 5.114397e-50 | -8.615850e-47 |
| Msa0978550 | Msa1417270 | -0.808891 | 2.478067e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417270 | MtrunA17_Chr5g0404661 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Msa1417270 | MtrunA17_Chr3g0134831 | 79.522 | 293 | 57 | 2 | 182 | 472 | 1 | 292 | 9.33e-172 | 484 |
| Msa1417270 | MtrunA17_Chr5g0404651 | 40.764 | 471 | 241 | 8 | 18 | 473 | 9 | 456 | 1.44e-123 | 370 |
| Msa1417270 | MtrunA17_Chr8g0372701 | 41.075 | 465 | 235 | 6 | 14 | 466 | 15 | 452 | 1.99e-121 | 364 |
| Msa1417270 | MtrunA17_Chr2g0315911 | 41.957 | 460 | 227 | 8 | 33 | 484 | 21 | 448 | 3.70e-117 | 352 |
| Msa1417270 | MtrunA17_Chr2g0315981 | 41.667 | 456 | 234 | 8 | 33 | 479 | 14 | 446 | 9.39e-113 | 340 |
| Msa1417270 | MtrunA17_Chr2g0315921 | 41.573 | 445 | 225 | 8 | 33 | 467 | 19 | 438 | 1.11e-112 | 340 |
| Msa1417270 | MtrunA17_Chr2g0315991 | 41.593 | 452 | 229 | 8 | 33 | 479 | 20 | 441 | 2.25e-112 | 340 |
| Msa1417270 | MtrunA17_Chr2g0315971 | 41.447 | 456 | 232 | 7 | 33 | 481 | 14 | 441 | 2.34e-111 | 345 |
| Msa1417270 | MtrunA17_Chr2g0315971 | 51.095 | 274 | 119 | 3 | 196 | 467 | 443 | 703 | 1.25e-82 | 270 |
| Msa1417270 | MtrunA17_Chr2g0316041 | 41.809 | 409 | 205 | 6 | 80 | 479 | 2 | 386 | 1.13e-100 | 309 |
| Msa1417270 | MtrunA17_Chr1g0155131 | 38.562 | 459 | 254 | 8 | 23 | 467 | 7 | 451 | 5.92e-97 | 300 |
| Msa1417270 | MtrunA17_Chr2g0316021 | 37.744 | 461 | 216 | 8 | 33 | 484 | 14 | 412 | 9.75e-97 | 298 |
| Msa1417270 | MtrunA17_Chr2g0292561 | 37.885 | 454 | 259 | 8 | 23 | 467 | 10 | 449 | 6.33e-96 | 297 |
| Msa1417270 | MtrunA17_Chr6g0452401 | 37.744 | 461 | 234 | 9 | 43 | 467 | 5 | 448 | 1.18e-93 | 292 |
| Msa1417270 | MtrunA17_Chr6g0452451 | 38.034 | 468 | 250 | 10 | 27 | 466 | 13 | 468 | 1.48e-93 | 293 |
| Msa1417270 | MtrunA17_Chr7g0215951 | 36.943 | 471 | 257 | 8 | 22 | 467 | 5 | 460 | 1.13e-91 | 288 |
| Msa1417270 | MtrunA17_Chr6g0452391 | 37.045 | 467 | 259 | 9 | 24 | 467 | 5 | 459 | 6.57e-91 | 286 |
| Msa1417270 | MtrunA17_Chr6g0452411 | 41.534 | 378 | 181 | 7 | 118 | 467 | 1 | 366 | 4.03e-90 | 281 |
| Msa1417270 | MtrunA17_Chr6g0452371 | 37.045 | 467 | 259 | 8 | 24 | 467 | 7 | 461 | 4.67e-89 | 281 |
| Msa1417270 | MtrunA17_Chr4g0059811 | 34.325 | 504 | 270 | 13 | 22 | 485 | 10 | 492 | 3.60e-87 | 276 |
| Msa1417270 | MtrunA17_Chr1g0155121 | 37.650 | 417 | 212 | 8 | 81 | 467 | 63 | 461 | 3.35e-86 | 273 |
| Msa1417270 | MtrunA17_Chr6g0466811 | 39.394 | 396 | 204 | 8 | 84 | 467 | 80 | 451 | 1.29e-85 | 272 |
| Msa1417270 | MtrunA17_Chr2g0308991 | 37.740 | 416 | 218 | 10 | 83 | 483 | 67 | 456 | 4.10e-85 | 271 |
| Msa1417270 | MtrunA17_Chr4g0072491 | 34.573 | 457 | 256 | 8 | 20 | 452 | 6 | 443 | 5.61e-85 | 271 |
| Msa1417270 | MtrunA17_Chr6g0452361 | 49.587 | 242 | 108 | 3 | 229 | 467 | 1 | 231 | 3.54e-73 | 232 |
| Msa1417270 | MtrunA17_Chr5g0404671 | 85.366 | 123 | 18 | 0 | 363 | 485 | 1 | 123 | 1.43e-69 | 219 |
| Msa1417270 | MtrunA17_Chr7g0276031 | 34.066 | 364 | 184 | 9 | 109 | 467 | 93 | 405 | 4.18e-66 | 220 |
| Msa1417270 | MtrunA17_Chr3g0127381 | 35.342 | 365 | 180 | 10 | 112 | 467 | 97 | 414 | 4.26e-66 | 221 |
| Msa1417270 | MtrunA17_Chr5g0404681 | 77.778 | 126 | 27 | 1 | 158 | 283 | 28 | 152 | 7.02e-66 | 209 |
| Msa1417270 | MtrunA17_Chr5g0404691 | 63.158 | 171 | 46 | 2 | 302 | 472 | 1 | 154 | 1.33e-61 | 198 |
| Msa1417270 | MtrunA17_Chr8g0346371 | 30.913 | 427 | 230 | 12 | 55 | 467 | 39 | 414 | 2.79e-59 | 202 |
| Msa1417270 | MtrunA17_Chr6g0452481 | 42.424 | 264 | 127 | 5 | 213 | 467 | 7 | 254 | 7.14e-59 | 196 |
| Msa1417270 | MtrunA17_Chr3g0134841 | 72.477 | 109 | 29 | 1 | 14 | 121 | 26 | 134 | 5.72e-51 | 169 |
| Msa1417270 | MtrunA17_Chr1g0148871 | 41.129 | 124 | 71 | 1 | 346 | 469 | 12 | 133 | 3.68e-23 | 96.3 |
| Msa1417270 | MtrunA17_Chr5g0404451 | 84.091 | 44 | 7 | 0 | 396 | 439 | 1 | 44 | 4.31e-18 | 78.2 |
| Msa1417270 | MtrunA17_Chr3g0145011 | 31.902 | 163 | 88 | 6 | 249 | 404 | 166 | 312 | 1.23e-11 | 66.2 |
| Msa1417270 | MtrunA17_Chr3g0141901 | 31.288 | 163 | 89 | 6 | 249 | 404 | 163 | 309 | 1.97e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1417270 | AT2G18193.1 | 44.350 | 469 | 217 | 8 | 25 | 481 | 17 | 453 | 3.90e-134 | 397 |
| Msa1417270 | AT2G18190.1 | 43.515 | 478 | 226 | 8 | 12 | 474 | 4 | 452 | 5.97e-132 | 391 |
| Msa1417270 | AT3G50940.1 | 44.685 | 461 | 230 | 6 | 10 | 467 | 3 | 441 | 1.52e-130 | 386 |
| Msa1417270 | AT5G17760.1 | 43.413 | 463 | 246 | 5 | 15 | 471 | 6 | 458 | 9.92e-124 | 370 |
| Msa1417270 | AT5G17730.1 | 43.137 | 459 | 240 | 7 | 12 | 467 | 3 | 443 | 2.88e-121 | 363 |
| Msa1417270 | AT5G17740.1 | 43.355 | 459 | 240 | 7 | 15 | 467 | 6 | 450 | 3.44e-120 | 362 |
| Msa1417270 | AT3G50930.1 | 42.760 | 442 | 230 | 5 | 34 | 467 | 73 | 499 | 7.98e-118 | 358 |
| Msa1417270 | AT4G05380.1 | 39.496 | 476 | 263 | 8 | 10 | 479 | 3 | 459 | 2.77e-109 | 332 |
| Msa1417270 | AT1G43910.1 | 37.234 | 470 | 259 | 9 | 10 | 467 | 2 | 447 | 3.62e-98 | 304 |
| Msa1417270 | AT5G17750.1 | 39.110 | 427 | 214 | 6 | 15 | 436 | 6 | 391 | 1.24e-97 | 300 |
| Msa1417270 | AT3G28510.1 | 41.565 | 409 | 201 | 7 | 82 | 468 | 67 | 459 | 2.61e-96 | 301 |
| Msa1417270 | AT3G28610.1 | 39.062 | 448 | 224 | 11 | 55 | 485 | 52 | 467 | 3.28e-94 | 294 |
| Msa1417270 | AT3G28600.1 | 37.768 | 466 | 245 | 11 | 18 | 467 | 10 | 446 | 7.66e-94 | 293 |
| Msa1417270 | AT4G25835.1 | 34.316 | 475 | 279 | 10 | 27 | 485 | 9 | 466 | 6.97e-91 | 286 |
| Msa1417270 | AT3G28580.1 | 36.831 | 486 | 247 | 13 | 5 | 463 | 3 | 455 | 1.72e-89 | 282 |
| Msa1417270 | AT3G28570.2 | 36.747 | 498 | 258 | 14 | 1 | 483 | 1 | 456 | 2.32e-89 | 281 |
| Msa1417270 | AT3G28570.1 | 36.939 | 490 | 252 | 14 | 9 | 483 | 2 | 449 | 4.44e-89 | 280 |
| Msa1417270 | AT3G28540.2 | 35.532 | 470 | 260 | 8 | 19 | 464 | 4 | 454 | 1.27e-88 | 280 |
| Msa1417270 | AT3G28540.1 | 35.532 | 470 | 260 | 8 | 19 | 464 | 4 | 454 | 1.58e-88 | 280 |
| Msa1417270 | AT5G40000.1 | 36.025 | 483 | 244 | 16 | 12 | 468 | 7 | 450 | 6.14e-88 | 277 |
| Msa1417270 | AT5G40010.1 | 36.709 | 474 | 256 | 8 | 13 | 463 | 8 | 460 | 1.86e-87 | 277 |
| Msa1417270 | AT5G57480.1 | 33.548 | 465 | 273 | 7 | 27 | 467 | 9 | 461 | 3.93e-86 | 274 |
| Msa1417270 | AT3G28600.2 | 45.886 | 316 | 147 | 7 | 165 | 467 | 103 | 407 | 1.13e-81 | 260 |
| Msa1417270 | AT4G30250.1 | 33.546 | 471 | 279 | 8 | 20 | 468 | 2 | 460 | 1.61e-81 | 262 |
| Msa1417270 | AT3G28520.1 | 44.073 | 329 | 163 | 5 | 155 | 466 | 117 | 441 | 1.68e-81 | 261 |
| Msa1417270 | AT4G30250.2 | 33.546 | 471 | 279 | 8 | 20 | 468 | 4 | 462 | 2.12e-81 | 262 |
| Msa1417270 | AT3G28580.2 | 34.937 | 478 | 245 | 12 | 5 | 463 | 3 | 433 | 2.10e-77 | 250 |
| Msa1417270 | AT5G17760.2 | 41.195 | 318 | 182 | 2 | 15 | 328 | 6 | 322 | 1.23e-75 | 241 |
| Msa1417270 | AT2G46620.1 | 32.684 | 462 | 232 | 14 | 25 | 467 | 15 | 416 | 4.68e-69 | 229 |
| Msa1417270 | AT3G29800.1 | 38.068 | 352 | 162 | 10 | 123 | 465 | 74 | 378 | 1.18e-60 | 205 |
| Msa1417270 | AT4G05340.1 | 55.844 | 77 | 32 | 1 | 344 | 420 | 19 | 93 | 7.98e-21 | 87.4 |
| Msa1417270 | AT5G43010.1 | 31.902 | 163 | 88 | 6 | 249 | 404 | 163 | 309 | 1.05e-11 | 67.0 |
| Msa1417270 | AT1G45000.1 | 31.902 | 163 | 88 | 6 | 249 | 404 | 163 | 309 | 1.52e-11 | 66.6 |
| Msa1417270 | AT3G28560.1 | 26.316 | 152 | 93 | 2 | 91 | 232 | 69 | 211 | 7.81e-11 | 63.2 |
Find 84 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTCAAATTGATCAGTTT+TGG | 0.150920 | tig0024455:-74130 | Msa1417270:CDS |
| CTGGGTCTACTTTGTCCTTA+TGG | 0.184391 | tig0024455:+70746 | None:intergenic |
| TCAAAAGACTATGAAGAAAA+TGG | 0.215368 | tig0024455:-73858 | Msa1417270:CDS |
| TGAAGTGAAACTTGGTTATT+TGG | 0.217186 | tig0024455:+74146 | None:intergenic |
| TAGAAGTTTACTTAATTTAT+TGG | 0.221662 | tig0024455:-70127 | Msa1417270:three_prime_UTR |
| TTGATGATATCAAGCTTAAA+TGG | 0.279360 | tig0024455:-73956 | Msa1417270:CDS |
| CCAGACAAAGTAAACTTTCT+AGG | 0.283489 | tig0024455:+70838 | None:intergenic |
| ATTTCTATTATATTTCTATA+TGG | 0.287169 | tig0024455:+74426 | None:intergenic |
| TTTAGTAGGGATATACTCTT+TGG | 0.296287 | tig0024455:+74076 | None:intergenic |
| GTCTGGTCTGCTTAACTATA+TGG | 0.299508 | tig0024455:-70821 | Msa1417270:CDS |
| ACCAGACAAGTTTCCAGATA+TGG | 0.299840 | tig0024455:-73349 | Msa1417270:CDS |
| TGAACAAATTGAAGAGCTAT+TGG | 0.308188 | tig0024455:-70605 | Msa1417270:CDS |
| AAACGTGGTTACTTATTATA+TGG | 0.310407 | tig0024455:-73564 | Msa1417270:CDS |
| AAAACTACAATAACATAATA+AGG | 0.310725 | tig0024455:+70389 | None:intergenic |
| AAGAACTATGTTGTTATGTT+TGG | 0.317224 | tig0024455:+74013 | None:intergenic |
| CCTAGAAAGTTTACTTTGTC+TGG | 0.319922 | tig0024455:-70838 | Msa1417270:CDS |
| TATTCACTTGTCATTTCTTA+AGG | 0.331615 | tig0024455:-70692 | Msa1417270:CDS |
| GGCCAAAGCATTCAGAATCT+TGG | 0.339174 | tig0024455:-70671 | Msa1417270:CDS |
| GAAATTTGATGTGTATGATT+TGG | 0.345687 | tig0024455:-73490 | Msa1417270:CDS |
| AATCTTGGCTTCTAATTACT+TGG | 0.360580 | tig0024455:-70656 | Msa1417270:CDS |
| AAGATTCATTCTATGCAATC+TGG | 0.364238 | tig0024455:-73729 | Msa1417270:CDS |
| ATCAAAACCATCATCATTGT+TGG | 0.393123 | tig0024455:+73917 | None:intergenic |
| AGCCAAGATTCTGAATGCTT+TGG | 0.400001 | tig0024455:+70669 | None:intergenic |
| TCCATATCTGGAAACTTGTC+TGG | 0.403332 | tig0024455:+73348 | None:intergenic |
| CTTTGGCTGCATAGTAAAGA+TGG | 0.405145 | tig0024455:+74093 | None:intergenic |
| CGACCAGGGCGCAACAATGC+TGG | 0.407208 | tig0024455:+70727 | None:intergenic |
| TCTAATTACTTGGACATTGA+AGG | 0.408423 | tig0024455:-70646 | Msa1417270:CDS |
| TTCATTTGATTCACTTGCTA+TGG | 0.411884 | tig0024455:-73673 | Msa1417270:CDS |
| TGTTGTTTATGTGTGGATAA+TGG | 0.411949 | tig0024455:+74360 | None:intergenic |
| TCTTCTTCTTTCACAAACAT+TGG | 0.424150 | tig0024455:-74311 | Msa1417270:CDS |
| TTATATGGTCCACCAGGAAC+TGG | 0.430679 | tig0024455:-73549 | Msa1417270:CDS |
| TTTAAGGGATTTGTAAGTGT+TGG | 0.439054 | tig0024455:+74049 | None:intergenic |
| ACTTACAAATCCCTTAAAGT+TGG | 0.449216 | tig0024455:-74044 | Msa1417270:CDS |
| GTTAAATCACTTTGTTTCCA+TGG | 0.449328 | tig0024455:+73705 | None:intergenic |
| ATCTAGTCTTATTGCTGCTA+TGG | 0.454061 | tig0024455:-73523 | Msa1417270:CDS |
| AAGAGAAACGACCAACCATT+GGG | 0.454644 | tig0024455:+74330 | None:intergenic |
| CAAAAGACTATGAAGAAAAT+GGG | 0.454921 | tig0024455:-73857 | Msa1417270:CDS |
| GAAGATCCTGATGTTGCTCT+TGG | 0.466250 | tig0024455:-70532 | Msa1417270:CDS |
| GAAAATTCCAACAATGATGA+TGG | 0.483127 | tig0024455:-73924 | Msa1417270:CDS |
| GATCAATTTGAAGTGAAACT+TGG | 0.486219 | tig0024455:+74138 | None:intergenic |
| AGATACTCTGCCACTACAGC+AGG | 0.486605 | tig0024455:+70565 | None:intergenic |
| GATATTTACGACGAACCATA+AGG | 0.488719 | tig0024455:-70761 | Msa1417270:CDS |
| ACTTATGATGCTATAAAAGC+AGG | 0.490362 | tig0024455:-73765 | Msa1417270:CDS |
| GTGAAACTTGGTTATTTGGT+TGG | 0.495911 | tig0024455:+74150 | None:intergenic |
| TTAACTATATGGATGGTTTG+TGG | 0.503709 | tig0024455:-70810 | Msa1417270:CDS |
| ATTGTTGCGCCCTGGTCGTA+TGG | 0.508196 | tig0024455:-70722 | Msa1417270:CDS |
| AATGATATCTGAAATTGTAA+TGG | 0.510074 | tig0024455:+70234 | None:intergenic |
| GAAGAGAAACGACCAACCAT+TGG | 0.510972 | tig0024455:+74329 | None:intergenic |
| ACATTGGTTCAGCATCATCA+TGG | 0.528828 | tig0024455:-74295 | Msa1417270:CDS |
| GCAAGTGAATCAAATGAAGC+AGG | 0.530314 | tig0024455:+73678 | None:intergenic |
| AATAAGTAACCACGTTTCCA+AGG | 0.530569 | tig0024455:+73570 | None:intergenic |
| CTATAATTGATGATTTAGAT+CGG | 0.531151 | tig0024455:-73632 | Msa1417270:CDS |
| GACCCAGCATTGTTGCGCCC+TGG | 0.532969 | tig0024455:-70730 | Msa1417270:CDS |
| AATTTCAGATATCATTCAGT+AGG | 0.538203 | tig0024455:-70227 | Msa1417270:three_prime_UTR |
| AGATGTCACCCCTGCTGTAG+TGG | 0.539506 | tig0024455:-70575 | Msa1417270:CDS |
| GACCAGGGCGCAACAATGCT+GGG | 0.539616 | tig0024455:+70728 | None:intergenic |
| GAAGCATAGAGATAAAGTAA+TGG | 0.547256 | tig0024455:-73814 | Msa1417270:CDS |
| GGTCTGCTTAACTATATGGA+TGG | 0.549195 | tig0024455:-70817 | Msa1417270:CDS |
| AGTTCCCTCTAGTATTGTAA+AGG | 0.554385 | tig0024455:-70320 | Msa1417270:three_prime_UTR |
| GATGGTTTGTGGTCAAGTTG+TGG | 0.563526 | tig0024455:-70799 | Msa1417270:CDS |
| AGTGCTCCAAGAGCAACATC+AGG | 0.565349 | tig0024455:+70526 | None:intergenic |
| TCTATTAGATGTCTCTCTCA+TGG | 0.569550 | tig0024455:+73428 | None:intergenic |
| GGTCTCATGTTGTTTATGTG+TGG | 0.571783 | tig0024455:+74353 | None:intergenic |
| TCTTAAAAGCATCATGAATG+TGG | 0.575866 | tig0024455:+74250 | None:intergenic |
| AGACATTGATTGCAATTCAG+AGG | 0.577579 | tig0024455:-73388 | Msa1417270:CDS |
| ATATGCATGTCCATACGACC+AGG | 0.580884 | tig0024455:+70712 | None:intergenic |
| TCATAAGTGCTTAAAACATG+TGG | 0.584224 | tig0024455:+73780 | None:intergenic |
| TACTTATTATATGGTCCACC+AGG | 0.593809 | tig0024455:-73555 | Msa1417270:CDS |
| GTTGGCAAGCCTTGGAAACG+TGG | 0.596762 | tig0024455:-73579 | Msa1417270:CDS |
| TGATGGAAAACAAGTAGTGG+AGG | 0.599321 | tig0024455:-73985 | Msa1417270:CDS |
| ATGATATCAAGCTTAAATGG+AGG | 0.601584 | tig0024455:-73953 | Msa1417270:CDS |
| AGTATAAGGAATATAAGCAT+AGG | 0.601948 | tig0024455:-73881 | Msa1417270:CDS |
| ATTCTATGCAATCTGGACCA+TGG | 0.603360 | tig0024455:-73722 | Msa1417270:CDS |
| GATACTCTGCCACTACAGCA+GGG | 0.619261 | tig0024455:+70566 | None:intergenic |
| CATACCTTTACAATACTAGA+GGG | 0.632099 | tig0024455:+70316 | None:intergenic |
| GCATACCTTTACAATACTAG+AGG | 0.643016 | tig0024455:+70315 | None:intergenic |
| AGAGAAACGACCAACCATTG+GGG | 0.654195 | tig0024455:+74331 | None:intergenic |
| AGTAATTTGTCACACAACTG+AGG | 0.662002 | tig0024455:+70425 | None:intergenic |
| ATACTCTGCCACTACAGCAG+GGG | 0.676441 | tig0024455:+70567 | None:intergenic |
| AATTTGTCACACAACTGAGG+AGG | 0.686396 | tig0024455:+70428 | None:intergenic |
| TATGCATGTCCATACGACCA+GGG | 0.693400 | tig0024455:+70713 | None:intergenic |
| GAGAAACGACCAACCATTGG+GGG | 0.708121 | tig0024455:+74332 | None:intergenic |
| TTTGTGGTCAAGTTGTGGAG+AGG | 0.724193 | tig0024455:-70794 | Msa1417270:CDS |
| GACAAAGTAAACTTTCTAGG+CGG | 0.728578 | tig0024455:+70841 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCTATTATATTTCTATA+TGG | + | tig0024455:70186-70205 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTACTTTTAC+GGG | - | tig0024455:71788-71807 | Msa1417270:intron | 10.0% |
| !! | TTATTCTATCAAATTATTAT+CGG | - | tig0024455:72594-72613 | Msa1417270:intron | 10.0% |
| !!! | ATGAAATTTCTAAGTTTTAA+GGG | + | tig0024455:70406-70425 | None:intergenic | 15.0% |
| !! | AAAAAGTTGTATAAAAAAGT+TGG | - | tig0024455:71012-71031 | Msa1417270:intron | 15.0% |
| !!! | TTTTTTTTTTAAACAAGCAA+TGG | - | tig0024455:71928-71947 | Msa1417270:intron | 15.0% |
| !!! | TTAATTTTAGTTTTTTGACA+CGG | + | tig0024455:72022-72041 | None:intergenic | 15.0% |
| !!! | AATTTGGTGTTATAAAAAAA+AGG | - | tig0024455:72145-72164 | Msa1417270:intron | 15.0% |
| !!! | AAAAAAAGGATTTTTAAGTT+TGG | - | tig0024455:72159-72178 | Msa1417270:intron | 15.0% |
| !!! | AAAAAAGGATTTTTAAGTTT+GGG | - | tig0024455:72160-72179 | Msa1417270:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | tig0024455:73263-73282 | Msa1417270:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | tig0024455:73264-73283 | Msa1417270:intron | 15.0% |
| !! | AAAGTGAAATATATTGTATT+GGG | - | tig0024455:73288-73307 | Msa1417270:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | tig0024455:73263-73282 | Msa1417270:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | tig0024455:73264-73283 | Msa1417270:intron | 15.0% |
| !! | AAAATGGAATATATTGTATT+GGG | - | tig0024455:73400-73419 | Msa1417270:CDS | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | tig0024455:73440-73459 | Msa1417270:CDS | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | tig0024455:73441-73460 | Msa1417270:CDS | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | tig0024455:73440-73459 | Msa1417270:CDS | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | tig0024455:73441-73460 | Msa1417270:CDS | 15.0% |
| !! | AAAACTACAATAACATAATA+AGG | + | tig0024455:74223-74242 | None:intergenic | 15.0% |
| !! | TAGAAGTTTACTTAATTTAT+TGG | - | tig0024455:74482-74501 | Msa1417270:five_prime_UTR | 15.0% |
| !! | ATGTTTATAAGATGAAAAAG+TGG | + | tig0024455:70138-70157 | None:intergenic | 20.0% |
| !!! | GATGAAATTTCTAAGTTTTA+AGG | + | tig0024455:70407-70426 | None:intergenic | 20.0% |
| !!! | TTATAGAGTTTTTTAGATCA+GGG | + | tig0024455:70963-70982 | None:intergenic | 20.0% |
| !!! | ATTATAGAGTTTTTTAGATC+AGG | + | tig0024455:70964-70983 | None:intergenic | 20.0% |
| !!! | CTATAATTGATGATTTAGAT+CGG | - | tig0024455:70977-70996 | Msa1417270:intron | 20.0% |
| !!! | TAACTGTTAAGAATTTTAAC+TGG | - | tig0024455:71443-71462 | Msa1417270:intron | 20.0% |
| !!! | TGTCTTATTTCTTACATTTA+CGG | - | tig0024455:71472-71491 | Msa1417270:intron | 20.0% |
| !!! | TGTTAGTTTATTAGATAGAT+AGG | - | tig0024455:71884-71903 | Msa1417270:intron | 20.0% |
| !!! | AAAAAAACTATTTCTATTGC+TGG | + | tig0024455:71914-71933 | None:intergenic | 20.0% |
| !! | CGGTTTAAATAATTTAGTTA+TGG | + | tig0024455:72002-72021 | None:intergenic | 20.0% |
| !! | ATAAATTATATGTTGATCGA+AGG | - | tig0024455:72116-72135 | Msa1417270:intron | 20.0% |
| !! | TTCAATGTAATCATATTTGT+TGG | + | tig0024455:72569-72588 | None:intergenic | 20.0% |
| !!! | ATAAACTTAATTTTTGACAG+TGG | + | tig0024455:73107-73126 | None:intergenic | 20.0% |
| !!! | AAAATGTAAGTCATTTTTAG+TGG | + | tig0024455:73159-73178 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | tig0024455:73265-73284 | Msa1417270:intron | 20.0% |
| !! | GAAAGTGAAATATATTGTAT+TGG | - | tig0024455:73287-73306 | Msa1417270:intron | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | tig0024455:73265-73284 | Msa1417270:intron | 20.0% |
| !! | GAAAATGGAATATATTGTAT+TGG | - | tig0024455:73399-73418 | Msa1417270:CDS | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | tig0024455:73473-73492 | Msa1417270:CDS | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | tig0024455:73474-73493 | Msa1417270:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | - | tig0024455:73510-73529 | Msa1417270:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | - | tig0024455:73510-73529 | Msa1417270:CDS | 20.0% |
| !!! | AATGATATCTGAAATTGTAA+TGG | + | tig0024455:74378-74397 | None:intergenic | 20.0% |
| !! | ACTTCAAATTGATCAGTTTT+GGG | - | tig0024455:70480-70499 | Msa1417270:CDS | 25.0% |
| !!! | AAGTGTTGGATATTTTAGTA+GGG | + | tig0024455:70549-70568 | None:intergenic | 25.0% |
| !!! | TAAGTGTTGGATATTTTAGT+AGG | + | tig0024455:70550-70569 | None:intergenic | 25.0% |
| !! | GGATATTTTTCCAACTTTAA+GGG | + | tig0024455:70578-70597 | None:intergenic | 25.0% |
| !! | TGGATATTTTTCCAACTTTA+AGG | + | tig0024455:70579-70598 | None:intergenic | 25.0% |
| ! | AAGAACTATGTTGTTATGTT+TGG | + | tig0024455:70599-70618 | None:intergenic | 25.0% |
| !! | TTGATGATATCAAGCTTAAA+TGG | - | tig0024455:70653-70672 | Msa1417270:CDS | 25.0% |
| !! | TATTCCTTATACTCCTTTTT+GGG | + | tig0024455:70721-70740 | None:intergenic | 25.0% |
| !! | ATATTCCTTATACTCCTTTT+TGG | + | tig0024455:70722-70741 | None:intergenic | 25.0% |
| ! | AGTATAAGGAATATAAGCAT+AGG | - | tig0024455:70728-70747 | Msa1417270:CDS | 25.0% |
| ! | TCAAAAGACTATGAAGAAAA+TGG | - | tig0024455:70751-70770 | Msa1417270:CDS | 25.0% |
| ! | CAAAAGACTATGAAGAAAAT+GGG | - | tig0024455:70752-70771 | Msa1417270:CDS | 25.0% |
| ! | AAACGTGGTTACTTATTATA+TGG | - | tig0024455:71045-71064 | Msa1417270:intron | 25.0% |
| ! | GAAATTTGATGTGTATGATT+TGG | - | tig0024455:71119-71138 | Msa1417270:intron | 25.0% |
| !!! | CAGATATGGATTTTTTAGAT+GGG | - | tig0024455:71274-71293 | Msa1417270:intron | 25.0% |
| !!! | CTCTTTTTTTAGTTTGAGTT+TGG | - | tig0024455:71401-71420 | Msa1417270:intron | 25.0% |
| ! | TTTGAAAGAGTAGAGAAAAA+GGG | - | tig0024455:71559-71578 | Msa1417270:intron | 25.0% |
| !!! | GTTTGTTGTTGTTGTTAAAT+TGG | - | tig0024455:71750-71769 | Msa1417270:intron | 25.0% |
| ! | GTAATAATTATGGAGCAAAA+TGG | - | tig0024455:71853-71872 | Msa1417270:intron | 25.0% |
| ! | TGATCGAAGGATTTATAATT+TGG | - | tig0024455:72129-72148 | Msa1417270:intron | 25.0% |
| !!! | ATTTTTAAGTTTGGGCATTT+TGG | - | tig0024455:72168-72187 | Msa1417270:intron | 25.0% |
| !! | GTCAAAACTTTTAACAGTTA+TGG | + | tig0024455:72378-72397 | None:intergenic | 25.0% |
| !!! | TAACTGTTAAAAGTTTTGAC+TGG | - | tig0024455:72378-72397 | Msa1417270:intron | 25.0% |
| !!! | AACTGTTAAAAGTTTTGACT+GGG | - | tig0024455:72379-72398 | Msa1417270:intron | 25.0% |
| !!! | TATCTGGTTAGTCTAATTTA+GGG | + | tig0024455:72500-72519 | None:intergenic | 25.0% |
| !!! | ATATCTGGTTAGTCTAATTT+AGG | + | tig0024455:72501-72520 | None:intergenic | 25.0% |
| ! | TATGTTATTCTACTGATAAG+AGG | + | tig0024455:72922-72941 | None:intergenic | 25.0% |
| ! | TTTAGTGGTTAATAAAGTAC+TGG | + | tig0024455:73144-73163 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGGGGAAAA+TGG | - | tig0024455:73384-73403 | Msa1417270:CDS | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | tig0024455:73607-73626 | Msa1417270:CDS | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | tig0024455:73608-73627 | Msa1417270:CDS | 25.0% |
| !!! | ACTTGTTTTTCTTGAAATTG+TGG | - | tig0024455:73725-73744 | Msa1417270:CDS | 25.0% |
| !! | TATTCACTTGTCATTTCTTA+AGG | - | tig0024455:73917-73936 | Msa1417270:CDS | 25.0% |
| ! | AATTTCAGATATCATTCAGT+AGG | - | tig0024455:74382-74401 | Msa1417270:five_prime_UTR | 25.0% |
| ! | TGTTGTTTATGTGTGGATAA+TGG | + | tig0024455:70252-70271 | None:intergenic | 30.0% |
| TCTTCTTCTTTCACAAACAT+TGG | - | tig0024455:70298-70317 | Msa1417270:three_prime_UTR | 30.0% | |
| !! | TCTTAAAAGCATCATGAATG+TGG | + | tig0024455:70362-70381 | None:intergenic | 30.0% |
| TGAAGTGAAACTTGGTTATT+TGG | + | tig0024455:70466-70485 | None:intergenic | 30.0% | |
| ! | GATCAATTTGAAGTGAAACT+TGG | + | tig0024455:70474-70493 | None:intergenic | 30.0% |
| ! | CACTTCAAATTGATCAGTTT+TGG | - | tig0024455:70479-70498 | Msa1417270:CDS | 30.0% |
| TTTAGTAGGGATATACTCTT+TGG | + | tig0024455:70536-70555 | None:intergenic | 30.0% | |
| TTTAAGGGATTTGTAAGTGT+TGG | + | tig0024455:70563-70582 | None:intergenic | 30.0% | |
| ACTTACAAATCCCTTAAAGT+TGG | - | tig0024455:70565-70584 | Msa1417270:CDS | 30.0% | |
| !! | AACATAGTTCTTGCTTTTGA+TGG | - | tig0024455:70607-70626 | Msa1417270:CDS | 30.0% |
| ! | TTTTGATGGAAAACAAGTAG+TGG | - | tig0024455:70621-70640 | Msa1417270:CDS | 30.0% |
| ATGATATCAAGCTTAAATGG+AGG | - | tig0024455:70656-70675 | Msa1417270:CDS | 30.0% | |
| GAAAATTCCAACAATGATGA+TGG | - | tig0024455:70685-70704 | Msa1417270:CDS | 30.0% | |
| ATCAAAACCATCATCATTGT+TGG | + | tig0024455:70695-70714 | None:intergenic | 30.0% | |
| !!! | TGGTTTTGATAATCCCAAAA+AGG | - | tig0024455:70705-70724 | Msa1417270:CDS | 30.0% |
| ! | TAATCCCAAAAAGGAGTATA+AGG | - | tig0024455:70714-70733 | Msa1417270:CDS | 30.0% |
| GAAGCATAGAGATAAAGTAA+TGG | - | tig0024455:70795-70814 | Msa1417270:CDS | 30.0% | |
| TCATAAGTGCTTAAAACATG+TGG | + | tig0024455:70832-70851 | None:intergenic | 30.0% | |
| ACTTATGATGCTATAAAAGC+AGG | - | tig0024455:70844-70863 | Msa1417270:CDS | 30.0% | |
| AAGATTCATTCTATGCAATC+TGG | - | tig0024455:70880-70899 | Msa1417270:intron | 30.0% | |
| ! | GTTAAATCACTTTGTTTCCA+TGG | + | tig0024455:70907-70926 | None:intergenic | 30.0% |
| ! | TTCATTTGATTCACTTGCTA+TGG | - | tig0024455:70936-70955 | Msa1417270:intron | 30.0% |
| !! | ATGATTTAGATCGGTTTTTG+AGG | - | tig0024455:70986-71005 | Msa1417270:intron | 30.0% |
| CCATCTAAAAAATCCATATC+TGG | + | tig0024455:71276-71295 | None:intergenic | 30.0% | |
| !!! | CCAGATATGGATTTTTTAGA+TGG | - | tig0024455:71273-71292 | Msa1417270:intron | 30.0% |
| !!! | GGATTTTTTAGATGGGATTA+AGG | - | tig0024455:71281-71300 | Msa1417270:intron | 30.0% |
| GTTTGAAAGAGTAGAGAAAA+AGG | - | tig0024455:71558-71577 | Msa1417270:intron | 30.0% | |
| TTGAAAGAGTAGAGAAAAAG+GGG | - | tig0024455:71560-71579 | Msa1417270:intron | 30.0% | |
| AGGAGAAGAAAAATAGCTAT+GGG | + | tig0024455:71609-71628 | None:intergenic | 30.0% | |
| GAGAAATAGGGTAGATTTAA+TGG | + | tig0024455:72260-72279 | None:intergenic | 30.0% | |
| TGAGAAATAGGTGAGAAATA+GGG | + | tig0024455:72272-72291 | None:intergenic | 30.0% | |
| GAGAGAAATATGTGAGAAAT+AGG | + | tig0024455:72284-72303 | None:intergenic | 30.0% | |
| GAAGTTATGAAGAGAGAAAT+AGG | + | tig0024455:72325-72344 | None:intergenic | 30.0% | |
| AACAGTTATGGAGTAACTAA+GGG | + | tig0024455:72366-72385 | None:intergenic | 30.0% | |
| TAACAGTTATGGAGTAACTA+AGG | + | tig0024455:72367-72386 | None:intergenic | 30.0% | |
| !! | ATCTGGTTAGTCTAATTTAG+GGG | + | tig0024455:72499-72518 | None:intergenic | 30.0% |
| AAATGACAATGTGTATTGTG+TGG | - | tig0024455:72730-72749 | Msa1417270:intron | 30.0% | |
| !!! | TTTGTTTTGTTCAGGTCTAA+TGG | + | tig0024455:72898-72917 | None:intergenic | 30.0% |
| !!! | TAAGAGGATTTGTTTTGTTC+AGG | + | tig0024455:72906-72925 | None:intergenic | 30.0% |
| ATACTTTCAGCTTAACTTCT+TGG | + | tig0024455:73036-73055 | None:intergenic | 30.0% | |
| ! | GACTTACATTTTGCTAGTTA+AGG | - | tig0024455:73167-73186 | Msa1417270:intron | 30.0% |
| CAAAATAGGTCAATTATACC+GGG | + | tig0024455:73340-73359 | None:intergenic | 30.0% | |
| CCAAAATAGGTCAATTATAC+CGG | + | tig0024455:73341-73360 | None:intergenic | 30.0% | |
| TCTGTGTGAAAAACCAAAAT+AGG | + | tig0024455:73354-73373 | None:intergenic | 30.0% | |
| !!! | TTGAAATGGGTCAGTTTTTT+TGG | - | tig0024455:73487-73506 | Msa1417270:CDS | 30.0% |
| !!! | TGAAATGGGTCAGTTTTTTT+GGG | - | tig0024455:73488-73507 | Msa1417270:CDS | 30.0% |
| AGAAAATAGGTCAGTTATTC+CGG | - | tig0024455:73523-73542 | Msa1417270:CDS | 30.0% | |
| AGAAAATAGGTCAGTTATTC+CGG | - | tig0024455:73523-73542 | Msa1417270:CDS | 30.0% | |
| TCTTGAAATTGTGGAATAGA+TGG | - | tig0024455:73734-73753 | Msa1417270:CDS | 30.0% | |
| TTAACTATATGGATGGTTTG+TGG | - | tig0024455:73799-73818 | Msa1417270:CDS | 30.0% | |
| AATCTTGGCTTCTAATTACT+TGG | - | tig0024455:73953-73972 | Msa1417270:CDS | 30.0% | |
| TCTAATTACTTGGACATTGA+AGG | - | tig0024455:73963-73982 | Msa1417270:CDS | 30.0% | |
| TGAACAAATTGAAGAGCTAT+TGG | - | tig0024455:74004-74023 | Msa1417270:CDS | 30.0% | |
| CATACCTTTACAATACTAGA+GGG | + | tig0024455:74296-74315 | None:intergenic | 30.0% | |
| GTGAAACTTGGTTATTTGGT+TGG | + | tig0024455:70462-70481 | None:intergenic | 35.0% | |
| !!! | CAAATTGATCAGTTTTGGGA+TGG | - | tig0024455:70484-70503 | Msa1417270:CDS | 35.0% |
| !! | ATTTAGATCGGTTTTTGAGG+AGG | - | tig0024455:70989-71008 | Msa1417270:intron | 35.0% |
| ATAAAAAAGTTGGCAAGCCT+TGG | - | tig0024455:71022-71041 | Msa1417270:intron | 35.0% | |
| AATAAGTAACCACGTTTCCA+AGG | + | tig0024455:71042-71061 | None:intergenic | 35.0% | |
| TACTTATTATATGGTCCACC+AGG | - | tig0024455:71054-71073 | Msa1417270:intron | 35.0% | |
| !! | ATCTAGTCTTATTGCTGCTA+TGG | - | tig0024455:71086-71105 | Msa1417270:intron | 35.0% |
| TCTATTAGATGTCTCTCTCA+TGG | + | tig0024455:71184-71203 | None:intergenic | 35.0% | |
| ! | AGACATTGATTGCAATTCAG+AGG | - | tig0024455:71221-71240 | Msa1417270:intron | 35.0% |
| ! | TGAGTTTGGTTTCTTGAGTT+TGG | - | tig0024455:71415-71434 | Msa1417270:intron | 35.0% |
| GTTTGTTTGAAGAGAGATAG+AGG | - | tig0024455:71498-71517 | Msa1417270:intron | 35.0% | |
| GAGAGAGACCAAATATATGT+GGG | - | tig0024455:71582-71601 | Msa1417270:intron | 35.0% | |
| GGAGAAGAAAAATAGCTATG+GGG | + | tig0024455:71608-71627 | None:intergenic | 35.0% | |
| GAGGAGAAGAAAAATAGCTA+TGG | + | tig0024455:71610-71629 | None:intergenic | 35.0% | |
| AAAGTGGAAAAGCAAAAGAG+TGG | + | tig0024455:71662-71681 | None:intergenic | 35.0% | |
| CAAAGAAAGAAGGGTAAAAG+TGG | + | tig0024455:71678-71697 | None:intergenic | 35.0% | |
| AATACCAATTCAAGACAAGG+TGG | + | tig0024455:71718-71737 | None:intergenic | 35.0% | |
| AGCAATACCAATTCAAGACA+AGG | + | tig0024455:71721-71740 | None:intergenic | 35.0% | |
| TTGTCTTGAATTGGTATTGC+TGG | - | tig0024455:71720-71739 | Msa1417270:intron | 35.0% | |
| TGTCTTGAATTGGTATTGCT+GGG | - | tig0024455:71721-71740 | Msa1417270:intron | 35.0% | |
| GTGAGAAATAGGTGAGAAAT+AGG | + | tig0024455:72273-72292 | None:intergenic | 35.0% | |
| TAGACTAACCAGATATGAAG+TGG | - | tig0024455:72505-72524 | Msa1417270:intron | 35.0% | |
| TAACCAGATATGAAGTGGTT+AGG | - | tig0024455:72510-72529 | Msa1417270:intron | 35.0% | |
| ATTGTATCTATGTCGTGTCT+GGG | - | tig0024455:72621-72640 | Msa1417270:intron | 35.0% | |
| CATCCATGAGTATATTTGTG+TGG | + | tig0024455:72691-72710 | None:intergenic | 35.0% | |
| ! | ACACATTGTCATTTGCATCT+GGG | + | tig0024455:72724-72743 | None:intergenic | 35.0% |
| ! | TACACATTGTCATTTGCATC+TGG | + | tig0024455:72725-72744 | None:intergenic | 35.0% |
| ! | TTTTGTTCAGGTCTAATGGT+AGG | + | tig0024455:72894-72913 | None:intergenic | 35.0% |
| !! | CTTGATAAGACTAGTCTTGT+TGG | + | tig0024455:72947-72966 | None:intergenic | 35.0% |
| CAAAGTAGGTCAATTAAACC+GGG | + | tig0024455:73228-73247 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | + | tig0024455:73229-73248 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | tig0024455:73242-73261 | None:intergenic | 35.0% | |
| ! | CCGGTATAATTGACCTATTT+TGG | - | tig0024455:73338-73357 | Msa1417270:CDS | 35.0% |
| GAAAATAGGTCAGTTATTCC+GGG | - | tig0024455:73524-73543 | Msa1417270:CDS | 35.0% | |
| GAAAATAGGTCAGTTATTCC+GGG | - | tig0024455:73524-73543 | Msa1417270:CDS | 35.0% | |
| GACAAAGTAAACTTTCTAGG+CGG | + | tig0024455:73771-73790 | None:intergenic | 35.0% | |
| CCAGACAAAGTAAACTTTCT+AGG | + | tig0024455:73774-73793 | None:intergenic | 35.0% | |
| CCTAGAAAGTTTACTTTGTC+TGG | - | tig0024455:73771-73790 | Msa1417270:CDS | 35.0% | |
| GATATTTACGACGAACCATA+AGG | - | tig0024455:73848-73867 | Msa1417270:CDS | 35.0% | |
| ! | AGTAATTTGTCACACAACTG+AGG | + | tig0024455:74187-74206 | None:intergenic | 35.0% |
| ! | GCAATGTTTGCTTCTTTTAC+AGG | + | tig0024455:74268-74287 | None:intergenic | 35.0% |
| AGTTCCCTCTAGTATTGTAA+AGG | - | tig0024455:74289-74308 | Msa1417270:CDS | 35.0% | |
| GCATACCTTTACAATACTAG+AGG | + | tig0024455:74297-74316 | None:intergenic | 35.0% | |
| ! | GGTCTCATGTTGTTTATGTG+TGG | + | tig0024455:70259-70278 | None:intergenic | 40.0% |
| AAGAGAAACGACCAACCATT+GGG | + | tig0024455:70282-70301 | None:intergenic | 40.0% | |
| !! | ACATTGGTTCAGCATCATCA+TGG | - | tig0024455:70314-70333 | Msa1417270:three_prime_UTR | 40.0% |
| CTTTGGCTGCATAGTAAAGA+TGG | + | tig0024455:70519-70538 | None:intergenic | 40.0% | |
| TGATGGAAAACAAGTAGTGG+AGG | - | tig0024455:70624-70643 | Msa1417270:CDS | 40.0% | |
| ATTCTATGCAATCTGGACCA+TGG | - | tig0024455:70887-70906 | Msa1417270:intron | 40.0% | |
| GCAAGTGAATCAAATGAAGC+AGG | + | tig0024455:70934-70953 | None:intergenic | 40.0% | |
| ! | AGACTAGATTTTCCAGTTCC+TGG | + | tig0024455:71075-71094 | None:intergenic | 40.0% |
| ACCAGACAAGTTTCCAGATA+TGG | - | tig0024455:71260-71279 | Msa1417270:intron | 40.0% | |
| TCCATATCTGGAAACTTGTC+TGG | + | tig0024455:71264-71283 | None:intergenic | 40.0% | |
| GGAGAGAGACCAAATATATG+TGG | - | tig0024455:71581-71600 | Msa1417270:intron | 40.0% | |
| TGCATTTCTTCGCTGTTTAG+AGG | + | tig0024455:71629-71648 | None:intergenic | 40.0% | |
| CACAGCTTGCAAAGAAAGAA+GGG | + | tig0024455:71687-71706 | None:intergenic | 40.0% | |
| TATGGAGCAAAATGGATAGC+AGG | - | tig0024455:71861-71880 | Msa1417270:intron | 40.0% | |
| ! | AACTAAGGGTGTGTTTGGTT+CGG | + | tig0024455:72352-72371 | None:intergenic | 40.0% |
| CATTGTATCTATGTCGTGTC+TGG | - | tig0024455:72620-72639 | Msa1417270:intron | 40.0% | |
| TCGTGTCTGGGAAAATACTT+GGG | - | tig0024455:72633-72652 | Msa1417270:intron | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | - | tig0024455:72664-72683 | Msa1417270:intron | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | - | tig0024455:72665-72684 | Msa1417270:intron | 40.0% | |
| GTGGCTCAGATTTAATGTCA+CGG | - | tig0024455:72749-72768 | Msa1417270:intron | 40.0% | |
| ! | CAATGGATTCGTTCAAACAG+TGG | + | tig0024455:72836-72855 | None:intergenic | 40.0% |
| CACTGTTTGAACGAATCCAT+TGG | - | tig0024455:72834-72853 | Msa1417270:intron | 40.0% | |
| !! | AATTGCTAGTTCTAGCAGAG+AGG | + | tig0024455:72992-73011 | None:intergenic | 40.0% |
| CCGGTTTAATTGACCTACTT+TGG | - | tig0024455:73226-73245 | Msa1417270:intron | 40.0% | |
| ATAGGTCAATTATACCGGGA+CGG | + | tig0024455:73336-73355 | None:intergenic | 40.0% | |
| GTCTGGTCTGCTTAACTATA+TGG | - | tig0024455:73788-73807 | Msa1417270:CDS | 40.0% | |
| GGTCTGCTTAACTATATGGA+TGG | - | tig0024455:73792-73811 | Msa1417270:CDS | 40.0% | |
| AGCCAAGATTCTGAATGCTT+TGG | + | tig0024455:73943-73962 | None:intergenic | 40.0% | |
| AATTTGTCACACAACTGAGG+AGG | + | tig0024455:74184-74203 | None:intergenic | 40.0% | |
| AAACAACATGAGACCCCCAA+TGG | - | tig0024455:70264-70283 | Msa1417270:three_prime_UTR | 45.0% | |
| AGAGAAACGACCAACCATTG+GGG | + | tig0024455:70281-70300 | None:intergenic | 45.0% | |
| GAAGAGAAACGACCAACCAT+TGG | + | tig0024455:70283-70302 | None:intergenic | 45.0% | |
| TTATATGGTCCACCAGGAAC+TGG | - | tig0024455:71060-71079 | Msa1417270:intron | 45.0% | |
| ! | CTAGATTTTCCAGTTCCTGG+TGG | + | tig0024455:71072-71091 | None:intergenic | 45.0% |
| GATAGAGGAGAGAGAGATAG+AGG | - | tig0024455:71513-71532 | Msa1417270:intron | 45.0% | |
| CTATGGGGCCCACATATATT+TGG | + | tig0024455:71593-71612 | None:intergenic | 45.0% | |
| GCACAGCTTGCAAAGAAAGA+AGG | + | tig0024455:71688-71707 | None:intergenic | 45.0% | |
| ! | GGAGTAACTAAGGGTGTGTT+TGG | + | tig0024455:72357-72376 | None:intergenic | 45.0% |
| ACGCCTAACCACTTCATATC+TGG | + | tig0024455:72516-72535 | None:intergenic | 45.0% | |
| GTCGTGTCTGGGAAAATACT+TGG | - | tig0024455:72632-72651 | Msa1417270:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | + | tig0024455:72672-72691 | None:intergenic | 45.0% | |
| GGGCCACACAAATATACTCA+TGG | - | tig0024455:72685-72704 | Msa1417270:intron | 45.0% | |
| ACATACACTACCAGACACGA+CGG | + | tig0024455:72800-72819 | None:intergenic | 45.0% | |
| TTCAGGTCTAATGGTAGGTG+AGG | + | tig0024455:72889-72908 | None:intergenic | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | + | tig0024455:73224-73243 | None:intergenic | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | - | tig0024455:73528-73547 | Msa1417270:CDS | 45.0% | |
| AAATAATACTCCCTCCGTCC+CGG | + | tig0024455:73545-73564 | None:intergenic | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | - | tig0024455:73528-73547 | Msa1417270:CDS | 45.0% | |
| ! | GATGGTTTGTGGTCAAGTTG+TGG | - | tig0024455:73810-73829 | Msa1417270:CDS | 45.0% |
| ! | TTTGTGGTCAAGTTGTGGAG+AGG | - | tig0024455:73815-73834 | Msa1417270:CDS | 45.0% |
| CTGGGTCTACTTTGTCCTTA+TGG | + | tig0024455:73866-73885 | None:intergenic | 45.0% | |
| TATGCATGTCCATACGACCA+GGG | + | tig0024455:73899-73918 | None:intergenic | 45.0% | |
| ATATGCATGTCCATACGACC+AGG | + | tig0024455:73900-73919 | None:intergenic | 45.0% | |
| ! | GGCCAAAGCATTCAGAATCT+TGG | - | tig0024455:73938-73957 | Msa1417270:CDS | 45.0% |
| GAAGATCCTGATGTTGCTCT+TGG | - | tig0024455:74077-74096 | Msa1417270:CDS | 45.0% | |
| !!! | TTTTTTTTTTTTTACTTTTA+CGG | - | tig0024455:71787-71806 | Msa1417270:intron | 5.0% |
| !! | ATTAATTATAGTAATAATTA+TGG | - | tig0024455:71843-71862 | Msa1417270:intron | 5.0% |
| AACATGAGACCCCCAATGGT+TGG | - | tig0024455:70268-70287 | Msa1417270:three_prime_UTR | 50.0% | |
| GAGAAACGACCAACCATTGG+GGG | + | tig0024455:70280-70299 | None:intergenic | 50.0% | |
| CTGGCCACCTTGTCTTGAAT+TGG | - | tig0024455:71711-71730 | Msa1417270:intron | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | + | tig0024455:73220-73239 | None:intergenic | 50.0% | |
| AAGTAGTACTACCTCCGTCC+CGG | - | tig0024455:73319-73338 | Msa1417270:intron | 50.0% | |
| ATACTCTGCCACTACAGCAG+GGG | + | tig0024455:74045-74064 | None:intergenic | 50.0% | |
| GATACTCTGCCACTACAGCA+GGG | + | tig0024455:74046-74065 | None:intergenic | 50.0% | |
| AGATACTCTGCCACTACAGC+AGG | + | tig0024455:74047-74066 | None:intergenic | 50.0% | |
| AGTGCTCCAAGAGCAACATC+AGG | + | tig0024455:74086-74105 | None:intergenic | 50.0% | |
| GTTGGCAAGCCTTGGAAACG+TGG | - | tig0024455:71030-71049 | Msa1417270:intron | 55.0% | |
| TCTTTGCAAGCTGTGCACGC+TGG | - | tig0024455:71692-71711 | Msa1417270:intron | 55.0% | |
| GAAGTGGTTAGGCGTGTCTC+AGG | - | tig0024455:72521-72540 | Msa1417270:intron | 55.0% | |
| AGACACGACGGACAGCACTT+GGG | + | tig0024455:72788-72807 | None:intergenic | 55.0% | |
| CCTCTTCGCACGCATTCCAA+TGG | + | tig0024455:72853-72872 | None:intergenic | 55.0% | |
| CCATTGGAATGCGTGCGAAG+AGG | - | tig0024455:72850-72869 | Msa1417270:intron | 55.0% | |
| TGGTAGGTGAGGCAGCAAGT+GGG | + | tig0024455:72878-72897 | None:intergenic | 55.0% | |
| ATGGTAGGTGAGGCAGCAAG+TGG | + | tig0024455:72879-72898 | None:intergenic | 55.0% | |
| AACTAGTACTCCCTCCGTCC+CGG | - | tig0024455:73207-73226 | Msa1417270:intron | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | + | tig0024455:73221-73240 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | + | tig0024455:73333-73352 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | tig0024455:73532-73551 | Msa1417270:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | tig0024455:73532-73551 | Msa1417270:CDS | 55.0% | |
| AAGTAGTACTCCCTCCGTCC+CGG | + | tig0024455:73665-73684 | None:intergenic | 55.0% | |
| ATTGTTGCGCCCTGGTCGTA+TGG | - | tig0024455:73887-73906 | Msa1417270:CDS | 55.0% | |
| AGATGTCACCCCTGCTGTAG+TGG | - | tig0024455:74034-74053 | Msa1417270:CDS | 55.0% | |
| CAGACACGACGGACAGCACT+TGG | + | tig0024455:72789-72808 | None:intergenic | 60.0% | |
| ! | CAAGTGCTGTCCGTCGTGTC+TGG | - | tig0024455:72787-72806 | Msa1417270:intron | 60.0% |
| GGTCAGTTATTCCGGGACGG+AGG | - | tig0024455:73531-73550 | Msa1417270:CDS | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | tig0024455:73531-73550 | Msa1417270:CDS | 60.0% | |
| GACCAGGGCGCAACAATGCT+GGG | + | tig0024455:73884-73903 | None:intergenic | 60.0% | |
| GACCCAGCATTGTTGCGCCC+TGG | - | tig0024455:73879-73898 | Msa1417270:CDS | 65.0% | |
| CGACCAGGGCGCAACAATGC+TGG | + | tig0024455:73885-73904 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024455 | gene | 70110 | 74521 | 70110 | ID=Msa1417270;Name=Msa1417270 |
| tig0024455 | mRNA | 70110 | 74521 | 70110 | ID=Msa1417270-mRNA-1;Parent=Msa1417270;Name=Msa1417270-mRNA-1;_AED=0.01;_eAED=0.01;_QI=161|1|1|1|1|1|2|343|485 |
| tig0024455 | exon | 70110 | 70878 | 70110 | ID=Msa1417270-mRNA-1:exon:23291;Parent=Msa1417270-mRNA-1 |
| tig0024455 | exon | 73329 | 74521 | 73329 | ID=Msa1417270-mRNA-1:exon:23290;Parent=Msa1417270-mRNA-1 |
| tig0024455 | five_prime_UTR | 74361 | 74521 | 74361 | ID=Msa1417270-mRNA-1:five_prime_utr;Parent=Msa1417270-mRNA-1 |
| tig0024455 | CDS | 73329 | 74360 | 73329 | ID=Msa1417270-mRNA-1:cds;Parent=Msa1417270-mRNA-1 |
| tig0024455 | CDS | 70453 | 70878 | 70453 | ID=Msa1417270-mRNA-1:cds;Parent=Msa1417270-mRNA-1 |
| tig0024455 | three_prime_UTR | 70110 | 70452 | 70110 | ID=Msa1417270-mRNA-1:three_prime_utr;Parent=Msa1417270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
