Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379000 | XP_003612072.1 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379000 | sp|Q8GW96|AATP3_ARATH | 44.350 | 469 | 217 | 8 | 25 | 481 | 17 | 453 | 3.83e-133 | 397 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379000 | G7KF10 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa1379000 | -0.842272 | 2.861213e-58 | -8.615850e-47 |
| Msa0024320 | Msa1379000 | -0.800883 | 1.169531e-48 | -8.615850e-47 |
| Msa0027020 | Msa1379000 | -0.810251 | 1.264581e-50 | -8.615850e-47 |
| Msa0027120 | Msa1379000 | -0.802234 | 6.180365e-49 | -8.615850e-47 |
| Msa0042210 | Msa1379000 | -0.809822 | 1.564767e-50 | -8.615850e-47 |
| Msa0047560 | Msa1379000 | -0.813735 | 2.201894e-51 | -8.615850e-47 |
| Msa0052180 | Msa1379000 | -0.815152 | 1.070171e-51 | -8.615850e-47 |
| Msa0064310 | Msa1379000 | -0.800488 | 1.407503e-48 | -8.615850e-47 |
| Msa0065520 | Msa1379000 | -0.823199 | 1.575376e-53 | -8.615850e-47 |
| Msa0075080 | Msa1379000 | -0.842586 | 2.362490e-58 | -8.615850e-47 |
| Msa0075820 | Msa1379000 | -0.809314 | 2.011261e-50 | -8.615850e-47 |
| Msa0076590 | Msa1379000 | -0.820619 | 6.233476e-53 | -8.615850e-47 |
| Msa0078160 | Msa1379000 | -0.811854 | 5.683897e-51 | -8.615850e-47 |
| Msa0078170 | Msa1379000 | -0.806975 | 6.334824e-50 | -8.615850e-47 |
| Msa0079100 | Msa1379000 | -0.801115 | 1.048263e-48 | -8.615850e-47 |
| Msa0086620 | Msa1379000 | -0.806695 | 7.260939e-50 | -8.615850e-47 |
| Msa0093360 | Msa1379000 | -0.824205 | 9.156581e-54 | -8.615850e-47 |
| Msa0095890 | Msa1379000 | -0.838436 | 2.879793e-57 | -8.615850e-47 |
| Msa0097220 | Msa1379000 | -0.810086 | 1.373114e-50 | -8.615850e-47 |
| Msa0120100 | Msa1379000 | -0.826126 | 3.219020e-54 | -8.615850e-47 |
| Msa0120160 | Msa1379000 | -0.821029 | 5.017571e-53 | -8.615850e-47 |
| Msa1350590 | Msa1379000 | -0.813791 | 2.140877e-51 | -8.615850e-47 |
| Msa1363170 | Msa1379000 | -0.815091 | 1.104191e-51 | -8.615850e-47 |
| Msa1373930 | Msa1379000 | -0.802011 | 6.868748e-49 | -8.615850e-47 |
| Msa1375120 | Msa1379000 | -0.810185 | 1.307057e-50 | -8.615850e-47 |
| Msa1375650 | Msa1379000 | -0.818383 | 2.017689e-52 | -8.615850e-47 |
| Msa1376510 | Msa1379000 | -0.804487 | 2.110387e-49 | -8.615850e-47 |
| Msa1379000 | Msa1379270 | -0.807115 | 5.916397e-50 | -8.615850e-47 |
| Msa1379000 | Msa1381060 | -0.802342 | 5.872308e-49 | -8.615850e-47 |
| Msa1379000 | Msa1388010 | -0.800889 | 1.166275e-48 | -8.615850e-47 |
| Msa1379000 | Msa1395380 | -0.804778 | 1.834734e-49 | -8.615850e-47 |
| Msa1379000 | Msa1407900 | 0.952819 | 1.060958e-110 | -8.615850e-47 |
| Msa1379000 | Msa1408230 | -0.815269 | 1.007909e-51 | -8.615850e-47 |
| Msa1379000 | Msa1412330 | -0.837684 | 4.495926e-57 | -8.615850e-47 |
| Msa1379000 | Msa1412810 | -0.800431 | 1.445614e-48 | -8.615850e-47 |
| Msa1379000 | Msa1415510 | -0.802743 | 4.854594e-49 | -8.615850e-47 |
| Msa1379000 | Msa1417270 | 0.997874 | 4.945788e-251 | -8.615850e-47 |
| Msa1379000 | Msa1423560 | -0.801311 | 9.558741e-49 | -8.615850e-47 |
| Msa1379000 | Msa1429180 | -0.804599 | 1.999425e-49 | -8.615850e-47 |
| Msa1379000 | Msa1432360 | 0.828945 | 6.778914e-55 | -8.615850e-47 |
| Msa1379000 | Msa1439000 | -0.811521 | 6.716288e-51 | -8.615850e-47 |
| Msa1379000 | Msa1454300 | -0.800102 | 1.687358e-48 | -8.615850e-47 |
| Msa1379000 | Msa1460340 | -0.812494 | 4.120977e-51 | -8.615850e-47 |
| Msa1379000 | Msa1462700 | -0.817474 | 3.235813e-52 | -8.615850e-47 |
| Msa0606340 | Msa1379000 | -0.801360 | 9.342633e-49 | -8.615850e-47 |
| Msa0608720 | Msa1379000 | -0.806017 | 1.009017e-49 | -8.615850e-47 |
| Msa0615460 | Msa1379000 | -0.830516 | 2.810280e-55 | -8.615850e-47 |
| Msa0616570 | Msa1379000 | -0.814754 | 1.311575e-51 | -8.615850e-47 |
| Msa0619960 | Msa1379000 | -0.804120 | 2.516242e-49 | -8.615850e-47 |
| Msa0620050 | Msa1379000 | -0.802014 | 6.856929e-49 | -8.615850e-47 |
| Msa0622450 | Msa1379000 | -0.820471 | 6.741513e-53 | -8.615850e-47 |
| Msa0644220 | Msa1379000 | -0.830697 | 2.537178e-55 | -8.615850e-47 |
| Msa0649160 | Msa1379000 | -0.803713 | 3.057661e-49 | -8.615850e-47 |
| Msa0654560 | Msa1379000 | -0.819736 | 9.928168e-53 | -8.615850e-47 |
| Msa0654850 | Msa1379000 | -0.822682 | 2.078388e-53 | -8.615850e-47 |
| Msa0655980 | Msa1379000 | -0.807204 | 5.666515e-50 | -8.615850e-47 |
| Msa0681100 | Msa1379000 | -0.814529 | 1.470998e-51 | -8.615850e-47 |
| Msa0684030 | Msa1379000 | -0.830812 | 2.378298e-55 | -8.615850e-47 |
| Msa0695250 | Msa1379000 | -0.801710 | 7.919477e-49 | -8.615850e-47 |
| Msa0698510 | Msa1379000 | -0.830900 | 2.262811e-55 | -8.615850e-47 |
| Msa0698680 | Msa1379000 | -0.823889 | 1.086233e-53 | -8.615850e-47 |
| Msa0699200 | Msa1379000 | -0.802166 | 6.381631e-49 | -8.615850e-47 |
| Msa0699900 | Msa1379000 | -0.817492 | 3.206450e-52 | -8.615850e-47 |
| Msa0713570 | Msa1379000 | -0.807128 | 5.880000e-50 | -8.615850e-47 |
| Msa0739820 | Msa1379000 | -0.816283 | 5.989225e-52 | -8.615850e-47 |
| Msa0745010 | Msa1379000 | -0.818365 | 2.036100e-52 | -8.615850e-47 |
| Msa0750200 | Msa1379000 | -0.830092 | 3.568201e-55 | -8.615850e-47 |
| Msa0751490 | Msa1379000 | -0.809033 | 2.310649e-50 | -8.615850e-47 |
| Msa0753590 | Msa1379000 | -0.858348 | 8.765149e-63 | -8.615850e-47 |
| Msa0755550 | Msa1379000 | -0.808061 | 3.725973e-50 | -8.615850e-47 |
| Msa0766910 | Msa1379000 | -0.801337 | 9.443033e-49 | -8.615850e-47 |
| Msa0784780 | Msa1379000 | -0.810914 | 9.095122e-51 | -8.615850e-47 |
| Msa0792490 | Msa1379000 | -0.802434 | 5.620677e-49 | -8.615850e-47 |
| Msa0793270 | Msa1379000 | 0.811393 | 7.158912e-51 | -8.615850e-47 |
| Msa0793530 | Msa1379000 | -0.802532 | 5.364628e-49 | -8.615850e-47 |
| Msa0794900 | Msa1379000 | -0.813221 | 2.856104e-51 | -8.615850e-47 |
| Msa0810420 | Msa1379000 | 0.998320 | 9.364276e-262 | -8.615850e-47 |
| Msa0817880 | Msa1379000 | -0.806793 | 6.923534e-50 | -8.615850e-47 |
| Msa0829250 | Msa1379000 | -0.803615 | 3.202893e-49 | -8.615850e-47 |
| Msa0833200 | Msa1379000 | -0.837676 | 4.516046e-57 | -8.615850e-47 |
| Msa0835050 | Msa1379000 | -0.810297 | 1.236423e-50 | -8.615850e-47 |
| Msa0122930 | Msa1379000 | -0.848676 | 5.266807e-60 | -8.615850e-47 |
| Msa0127350 | Msa1379000 | -0.803545 | 3.312615e-49 | -8.615850e-47 |
| Msa0167160 | Msa1379000 | -0.806120 | 9.595770e-50 | -8.615850e-47 |
| Msa0167570 | Msa1379000 | -0.838194 | 3.324610e-57 | -8.615850e-47 |
| Msa0181560 | Msa1379000 | -0.806865 | 6.684466e-50 | -8.615850e-47 |
| Msa0184900 | Msa1379000 | -0.805182 | 1.510216e-49 | -8.615850e-47 |
| Msa0185540 | Msa1379000 | -0.830033 | 3.687129e-55 | -8.615850e-47 |
| Msa0211590 | Msa1379000 | -0.814075 | 1.852846e-51 | -8.615850e-47 |
| Msa0213590 | Msa1379000 | -0.810195 | 1.300670e-50 | -8.615850e-47 |
| Msa0224180 | Msa1379000 | -0.812991 | 3.208325e-51 | -8.615850e-47 |
| Msa0225080 | Msa1379000 | -0.808361 | 3.216397e-50 | -8.615850e-47 |
| Msa0225190 | Msa1379000 | -0.803374 | 3.594746e-49 | -8.615850e-47 |
| Msa0225280 | Msa1379000 | -0.805199 | 1.498344e-49 | -8.615850e-47 |
| Msa1228260 | Msa1379000 | -0.806726 | 7.150601e-50 | -8.615850e-47 |
| Msa1266750 | Msa1379000 | -0.807768 | 4.302397e-50 | -8.615850e-47 |
| Msa1269730 | Msa1379000 | -0.830446 | 2.924073e-55 | -8.615850e-47 |
| Msa1271220 | Msa1379000 | -0.805473 | 1.312452e-49 | -8.615850e-47 |
| Msa1297490 | Msa1379000 | -0.806997 | 6.267575e-50 | -8.615850e-47 |
| Msa1297550 | Msa1379000 | -0.815697 | 8.093479e-52 | -8.615850e-47 |
| Msa1303690 | Msa1379000 | -0.811666 | 6.245053e-51 | -8.615850e-47 |
| Msa1325260 | Msa1379000 | -0.824920 | 6.214323e-54 | -8.615850e-47 |
| Msa1330080 | Msa1379000 | -0.806882 | 6.627336e-50 | -8.615850e-47 |
| Msa1341710 | Msa1379000 | -0.807872 | 4.087247e-50 | -8.615850e-47 |
| Msa1341850 | Msa1379000 | -0.802417 | 5.665175e-49 | -8.615850e-47 |
| Msa0367380 | Msa1379000 | -0.816263 | 6.052100e-52 | -8.615850e-47 |
| Msa0367600 | Msa1379000 | -0.816826 | 4.526953e-52 | -8.615850e-47 |
| Msa0375100 | Msa1379000 | -0.801171 | 1.021259e-48 | -8.615850e-47 |
| Msa0375570 | Msa1379000 | -0.806411 | 8.335669e-50 | -8.615850e-47 |
| Msa0377990 | Msa1379000 | -0.806475 | 8.078557e-50 | -8.615850e-47 |
| Msa0380470 | Msa1379000 | -0.816127 | 6.489872e-52 | -8.615850e-47 |
| Msa0382020 | Msa1379000 | -0.809157 | 2.173513e-50 | -8.615850e-47 |
| Msa0382050 | Msa1379000 | -0.837672 | 4.526140e-57 | -8.615850e-47 |
| Msa0386230 | Msa1379000 | -0.819456 | 1.150722e-52 | -8.615850e-47 |
| Msa0390760 | Msa1379000 | -0.810449 | 1.146100e-50 | -8.615850e-47 |
| Msa0393880 | Msa1379000 | -0.820012 | 8.589138e-53 | -8.615850e-47 |
| Msa0397420 | Msa1379000 | -0.811382 | 7.198033e-51 | -8.615850e-47 |
| Msa0415210 | Msa1379000 | -0.804957 | 1.683459e-49 | -8.615850e-47 |
| Msa0424220 | Msa1379000 | -0.816047 | 6.763586e-52 | -8.615850e-47 |
| Msa0425810 | Msa1379000 | -0.800598 | 1.337121e-48 | -8.615850e-47 |
| Msa0427230 | Msa1379000 | -0.802629 | 5.123212e-49 | -8.615850e-47 |
| Msa0427600 | Msa1379000 | -0.805205 | 1.493656e-49 | -8.615850e-47 |
| Msa0428280 | Msa1379000 | -0.822832 | 1.918654e-53 | -8.615850e-47 |
| Msa0428300 | Msa1379000 | -0.816648 | 4.961687e-52 | -8.615850e-47 |
| Msa0429990 | Msa1379000 | -0.814866 | 1.238325e-51 | -8.615850e-47 |
| Msa0431270 | Msa1379000 | -0.812076 | 5.084293e-51 | -8.615850e-47 |
| Msa0431550 | Msa1379000 | -0.835806 | 1.354228e-56 | -8.615850e-47 |
| Msa0436660 | Msa1379000 | -0.808717 | 2.699421e-50 | -8.615850e-47 |
| Msa0439090 | Msa1379000 | -0.808824 | 2.560910e-50 | -8.615850e-47 |
| Msa0444770 | Msa1379000 | -0.805556 | 1.260807e-49 | -8.615850e-47 |
| Msa0446110 | Msa1379000 | -0.812748 | 3.625979e-51 | -8.615850e-47 |
| Msa0471130 | Msa1379000 | -0.804984 | 1.661247e-49 | -8.615850e-47 |
| Msa0472570 | Msa1379000 | -0.803739 | 3.019453e-49 | -8.615850e-47 |
| Msa0473740 | Msa1379000 | -0.805658 | 1.200162e-49 | -8.615850e-47 |
| Msa0474630 | Msa1379000 | -0.829624 | 4.637452e-55 | -8.615850e-47 |
| Msa0474660 | Msa1379000 | -0.813245 | 2.821763e-51 | -8.615850e-47 |
| Msa0476140 | Msa1379000 | -0.823317 | 1.478394e-53 | -8.615850e-47 |
| Msa0476560 | Msa1379000 | -0.834941 | 2.240311e-56 | -8.615850e-47 |
| Msa0479890 | Msa1379000 | -0.802333 | 5.896589e-49 | -8.615850e-47 |
| Msa0984230 | Msa1379000 | -0.803586 | 3.247516e-49 | -8.615850e-47 |
| Msa0985570 | Msa1379000 | -0.803603 | 3.222296e-49 | -8.615850e-47 |
| Msa1002550 | Msa1379000 | -0.833378 | 5.521108e-56 | -8.615850e-47 |
| Msa1027910 | Msa1379000 | 0.809983 | 1.444996e-50 | -8.615850e-47 |
| Msa1028890 | Msa1379000 | -0.821468 | 3.973239e-53 | -8.615850e-47 |
| Msa1031190 | Msa1379000 | -0.816789 | 4.613177e-52 | -8.615850e-47 |
| Msa1036260 | Msa1379000 | -0.824088 | 9.757108e-54 | -8.615850e-47 |
| Msa1037440 | Msa1379000 | -0.812467 | 4.178395e-51 | -8.615850e-47 |
| Msa1045750 | Msa1379000 | -0.813610 | 2.345911e-51 | -8.615850e-47 |
| Msa1058260 | Msa1379000 | 0.803691 | 3.088867e-49 | -8.615850e-47 |
| Msa1058280 | Msa1379000 | 0.830753 | 2.458601e-55 | -8.615850e-47 |
| Msa1058550 | Msa1379000 | -0.819046 | 1.426470e-52 | -8.615850e-47 |
| Msa1068010 | Msa1379000 | -0.820511 | 6.599450e-53 | -8.615850e-47 |
| Msa1070370 | Msa1379000 | -0.816807 | 4.571351e-52 | -8.615850e-47 |
| Msa1078120 | Msa1379000 | -0.823087 | 1.672772e-53 | -8.615850e-47 |
| Msa1084890 | Msa1379000 | 0.811301 | 7.495835e-51 | -8.615850e-47 |
| Msa1091400 | Msa1379000 | -0.820778 | 5.730026e-53 | -8.615850e-47 |
| Msa1095880 | Msa1379000 | -0.813477 | 2.509118e-51 | -8.615850e-47 |
| Msa0266150 | Msa1379000 | -0.802705 | 4.942550e-49 | -8.615850e-47 |
| Msa0266330 | Msa1379000 | -0.818508 | 1.889352e-52 | -8.615850e-47 |
| Msa0292060 | Msa1379000 | -0.801284 | 9.681463e-49 | -8.615850e-47 |
| Msa0299130 | Msa1379000 | -0.800565 | 1.357835e-48 | -8.615850e-47 |
| Msa0300130 | Msa1379000 | -0.807335 | 5.314715e-50 | -8.615850e-47 |
| Msa0340700 | Msa1379000 | -0.803634 | 3.174118e-49 | -8.615850e-47 |
| Msa0341950 | Msa1379000 | -0.820260 | 7.533405e-53 | -8.615850e-47 |
| Msa0347280 | Msa1379000 | -0.806896 | 6.584010e-50 | -8.615850e-47 |
| Msa1119420 | Msa1379000 | -0.812458 | 4.196972e-51 | -8.615850e-47 |
| Msa1121920 | Msa1379000 | -0.808729 | 2.684442e-50 | -8.615850e-47 |
| Msa1122710 | Msa1379000 | -0.804338 | 2.265967e-49 | -8.615850e-47 |
| Msa1123260 | Msa1379000 | -0.800607 | 1.331594e-48 | -8.615850e-47 |
| Msa1129510 | Msa1379000 | -0.802503 | 5.438851e-49 | -8.615850e-47 |
| Msa1130150 | Msa1379000 | -0.832803 | 7.672577e-56 | -8.615850e-47 |
| Msa1134800 | Msa1379000 | -0.808688 | 2.739464e-50 | -8.615850e-47 |
| Msa1137210 | Msa1379000 | 0.818130 | 2.301030e-52 | -8.615850e-47 |
| Msa1156100 | Msa1379000 | -0.827119 | 1.864966e-54 | -8.615850e-47 |
| Msa1156430 | Msa1379000 | -0.808893 | 2.475776e-50 | -8.615850e-47 |
| Msa1158180 | Msa1379000 | -0.814196 | 1.742411e-51 | -8.615850e-47 |
| Msa1161060 | Msa1379000 | -0.808382 | 3.183972e-50 | -8.615850e-47 |
| Msa1162870 | Msa1379000 | 0.812143 | 4.917295e-51 | -8.615850e-47 |
| Msa1190670 | Msa1379000 | -0.809521 | 1.816406e-50 | -8.615850e-47 |
| Msa1191530 | Msa1379000 | -0.804736 | 1.871850e-49 | -8.615850e-47 |
| Msa1199700 | Msa1379000 | -0.803487 | 3.405515e-49 | -8.615850e-47 |
| Msa1203320 | Msa1379000 | -0.821303 | 4.337328e-53 | -8.615850e-47 |
| Msa1215540 | Msa1379000 | -0.800692 | 1.279103e-48 | -8.615850e-47 |
| Msa0484590 | Msa1379000 | -0.818110 | 2.325026e-52 | -8.615850e-47 |
| Msa0487480 | Msa1379000 | -0.813076 | 3.074123e-51 | -8.615850e-47 |
| Msa0489330 | Msa1379000 | -0.807056 | 6.089646e-50 | -8.615850e-47 |
| Msa0490740 | Msa1379000 | -0.805794 | 1.123763e-49 | -8.615850e-47 |
| Msa0492330 | Msa1379000 | -0.830958 | 2.189956e-55 | -8.615850e-47 |
| Msa0500580 | Msa1379000 | -0.821546 | 3.812598e-53 | -8.615850e-47 |
| Msa0506700 | Msa1379000 | -0.822027 | 2.949817e-53 | -8.615850e-47 |
| Msa0514630 | Msa1379000 | -0.801930 | 7.135790e-49 | -8.615850e-47 |
| Msa0519070 | Msa1379000 | -0.814312 | 1.642691e-51 | -8.615850e-47 |
| Msa0519090 | Msa1379000 | -0.828739 | 7.604829e-55 | -8.615850e-47 |
| Msa0519100 | Msa1379000 | -0.832801 | 7.683638e-56 | -8.615850e-47 |
| Msa0523600 | Msa1379000 | -0.801260 | 9.791760e-49 | -8.615850e-47 |
| Msa0528180 | Msa1379000 | 0.816092 | 6.607947e-52 | -8.615850e-47 |
| Msa0558570 | Msa1379000 | 0.826938 | 2.060980e-54 | -8.615850e-47 |
| Msa0561450 | Msa1379000 | -0.819770 | 9.752150e-53 | -8.615850e-47 |
| Msa0580890 | Msa1379000 | -0.816777 | 4.642841e-52 | -8.615850e-47 |
| Msa0858250 | Msa1379000 | -0.812543 | 4.021505e-51 | -8.615850e-47 |
| Msa0868500 | Msa1379000 | -0.830545 | 2.764787e-55 | -8.615850e-47 |
| Msa0868510 | Msa1379000 | -0.817890 | 2.607584e-52 | -8.615850e-47 |
| Msa0868520 | Msa1379000 | -0.808199 | 3.483391e-50 | -8.615850e-47 |
| Msa0882480 | Msa1379000 | -0.812522 | 4.064480e-51 | -8.615850e-47 |
| Msa0888520 | Msa1379000 | -0.804644 | 1.956340e-49 | -8.615850e-47 |
| Msa0935840 | Msa1379000 | -0.829345 | 5.422855e-55 | -8.615850e-47 |
| Msa0941410 | Msa1379000 | -0.816191 | 6.279931e-52 | -8.615850e-47 |
| Msa0941420 | Msa1379000 | -0.807573 | 4.732854e-50 | -8.615850e-47 |
| Msa0945160 | Msa1379000 | -0.805104 | 1.568130e-49 | -8.615850e-47 |
| Msa0958960 | Msa1379000 | -0.830512 | 2.816268e-55 | -8.615850e-47 |
| Msa0964400 | Msa1379000 | -0.805029 | 1.626262e-49 | -8.615850e-47 |
| Msa0967890 | Msa1379000 | -0.800301 | 1.537179e-48 | -8.615850e-47 |
| Msa0973010 | Msa1379000 | -0.834583 | 2.756213e-56 | -8.615850e-47 |
| Msa0978540 | Msa1379000 | -0.814107 | 1.823438e-51 | -8.615850e-47 |
| Msa0978550 | Msa1379000 | -0.814272 | 1.676719e-51 | -8.615850e-47 |
| Msa0978560 | Msa1379000 | -0.802316 | 5.945304e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379000 | MtrunA17_Chr5g0404661 | 95.868 | 484 | 15 | 2 | 1 | 483 | 3 | 482 | 0.0 | 952 |
| Msa1379000 | MtrunA17_Chr3g0134831 | 79.522 | 293 | 57 | 2 | 182 | 472 | 1 | 292 | 9.33e-172 | 484 |
| Msa1379000 | MtrunA17_Chr5g0404651 | 40.764 | 471 | 241 | 8 | 18 | 473 | 9 | 456 | 1.44e-123 | 370 |
| Msa1379000 | MtrunA17_Chr8g0372701 | 41.075 | 465 | 235 | 6 | 14 | 466 | 15 | 452 | 1.99e-121 | 364 |
| Msa1379000 | MtrunA17_Chr2g0315911 | 41.957 | 460 | 227 | 8 | 33 | 484 | 21 | 448 | 3.70e-117 | 352 |
| Msa1379000 | MtrunA17_Chr2g0315981 | 41.667 | 456 | 234 | 8 | 33 | 479 | 14 | 446 | 9.39e-113 | 340 |
| Msa1379000 | MtrunA17_Chr2g0315921 | 41.573 | 445 | 225 | 8 | 33 | 467 | 19 | 438 | 1.11e-112 | 340 |
| Msa1379000 | MtrunA17_Chr2g0315991 | 41.593 | 452 | 229 | 8 | 33 | 479 | 20 | 441 | 2.25e-112 | 340 |
| Msa1379000 | MtrunA17_Chr2g0315971 | 41.447 | 456 | 232 | 7 | 33 | 481 | 14 | 441 | 2.34e-111 | 345 |
| Msa1379000 | MtrunA17_Chr2g0315971 | 51.095 | 274 | 119 | 3 | 196 | 467 | 443 | 703 | 1.25e-82 | 270 |
| Msa1379000 | MtrunA17_Chr2g0316041 | 41.809 | 409 | 205 | 6 | 80 | 479 | 2 | 386 | 1.13e-100 | 309 |
| Msa1379000 | MtrunA17_Chr1g0155131 | 38.562 | 459 | 254 | 8 | 23 | 467 | 7 | 451 | 5.92e-97 | 300 |
| Msa1379000 | MtrunA17_Chr2g0316021 | 37.744 | 461 | 216 | 8 | 33 | 484 | 14 | 412 | 9.75e-97 | 298 |
| Msa1379000 | MtrunA17_Chr2g0292561 | 37.885 | 454 | 259 | 8 | 23 | 467 | 10 | 449 | 6.33e-96 | 297 |
| Msa1379000 | MtrunA17_Chr6g0452401 | 37.744 | 461 | 234 | 9 | 43 | 467 | 5 | 448 | 1.18e-93 | 292 |
| Msa1379000 | MtrunA17_Chr6g0452451 | 38.034 | 468 | 250 | 10 | 27 | 466 | 13 | 468 | 1.48e-93 | 293 |
| Msa1379000 | MtrunA17_Chr7g0215951 | 36.943 | 471 | 257 | 8 | 22 | 467 | 5 | 460 | 1.13e-91 | 288 |
| Msa1379000 | MtrunA17_Chr6g0452391 | 37.045 | 467 | 259 | 9 | 24 | 467 | 5 | 459 | 6.57e-91 | 286 |
| Msa1379000 | MtrunA17_Chr6g0452411 | 41.534 | 378 | 181 | 7 | 118 | 467 | 1 | 366 | 4.03e-90 | 281 |
| Msa1379000 | MtrunA17_Chr6g0452371 | 37.045 | 467 | 259 | 8 | 24 | 467 | 7 | 461 | 4.67e-89 | 281 |
| Msa1379000 | MtrunA17_Chr4g0059811 | 34.325 | 504 | 270 | 13 | 22 | 485 | 10 | 492 | 3.60e-87 | 276 |
| Msa1379000 | MtrunA17_Chr1g0155121 | 37.650 | 417 | 212 | 8 | 81 | 467 | 63 | 461 | 3.35e-86 | 273 |
| Msa1379000 | MtrunA17_Chr6g0466811 | 39.394 | 396 | 204 | 8 | 84 | 467 | 80 | 451 | 1.29e-85 | 272 |
| Msa1379000 | MtrunA17_Chr2g0308991 | 37.740 | 416 | 218 | 10 | 83 | 483 | 67 | 456 | 4.10e-85 | 271 |
| Msa1379000 | MtrunA17_Chr4g0072491 | 34.573 | 457 | 256 | 8 | 20 | 452 | 6 | 443 | 5.61e-85 | 271 |
| Msa1379000 | MtrunA17_Chr6g0452361 | 49.587 | 242 | 108 | 3 | 229 | 467 | 1 | 231 | 3.54e-73 | 232 |
| Msa1379000 | MtrunA17_Chr5g0404671 | 85.366 | 123 | 18 | 0 | 363 | 485 | 1 | 123 | 1.43e-69 | 219 |
| Msa1379000 | MtrunA17_Chr7g0276031 | 34.066 | 364 | 184 | 9 | 109 | 467 | 93 | 405 | 4.18e-66 | 220 |
| Msa1379000 | MtrunA17_Chr3g0127381 | 35.342 | 365 | 180 | 10 | 112 | 467 | 97 | 414 | 4.26e-66 | 221 |
| Msa1379000 | MtrunA17_Chr5g0404681 | 77.778 | 126 | 27 | 1 | 158 | 283 | 28 | 152 | 7.02e-66 | 209 |
| Msa1379000 | MtrunA17_Chr5g0404691 | 63.158 | 171 | 46 | 2 | 302 | 472 | 1 | 154 | 1.33e-61 | 198 |
| Msa1379000 | MtrunA17_Chr8g0346371 | 30.913 | 427 | 230 | 12 | 55 | 467 | 39 | 414 | 2.79e-59 | 202 |
| Msa1379000 | MtrunA17_Chr6g0452481 | 42.424 | 264 | 127 | 5 | 213 | 467 | 7 | 254 | 7.14e-59 | 196 |
| Msa1379000 | MtrunA17_Chr3g0134841 | 72.477 | 109 | 29 | 1 | 14 | 121 | 26 | 134 | 5.72e-51 | 169 |
| Msa1379000 | MtrunA17_Chr1g0148871 | 41.129 | 124 | 71 | 1 | 346 | 469 | 12 | 133 | 3.68e-23 | 96.3 |
| Msa1379000 | MtrunA17_Chr5g0404451 | 84.091 | 44 | 7 | 0 | 396 | 439 | 1 | 44 | 4.31e-18 | 78.2 |
| Msa1379000 | MtrunA17_Chr3g0145011 | 31.902 | 163 | 88 | 6 | 249 | 404 | 166 | 312 | 1.23e-11 | 66.2 |
| Msa1379000 | MtrunA17_Chr3g0141901 | 31.288 | 163 | 89 | 6 | 249 | 404 | 163 | 309 | 1.97e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379000 | AT2G18193.1 | 44.350 | 469 | 217 | 8 | 25 | 481 | 17 | 453 | 3.90e-134 | 397 |
| Msa1379000 | AT2G18190.1 | 43.515 | 478 | 226 | 8 | 12 | 474 | 4 | 452 | 5.97e-132 | 391 |
| Msa1379000 | AT3G50940.1 | 44.685 | 461 | 230 | 6 | 10 | 467 | 3 | 441 | 1.52e-130 | 386 |
| Msa1379000 | AT5G17760.1 | 43.413 | 463 | 246 | 5 | 15 | 471 | 6 | 458 | 9.92e-124 | 370 |
| Msa1379000 | AT5G17730.1 | 43.137 | 459 | 240 | 7 | 12 | 467 | 3 | 443 | 2.88e-121 | 363 |
| Msa1379000 | AT5G17740.1 | 43.355 | 459 | 240 | 7 | 15 | 467 | 6 | 450 | 3.44e-120 | 362 |
| Msa1379000 | AT3G50930.1 | 42.760 | 442 | 230 | 5 | 34 | 467 | 73 | 499 | 7.98e-118 | 358 |
| Msa1379000 | AT4G05380.1 | 39.496 | 476 | 263 | 8 | 10 | 479 | 3 | 459 | 2.77e-109 | 332 |
| Msa1379000 | AT1G43910.1 | 37.234 | 470 | 259 | 9 | 10 | 467 | 2 | 447 | 3.62e-98 | 304 |
| Msa1379000 | AT5G17750.1 | 39.110 | 427 | 214 | 6 | 15 | 436 | 6 | 391 | 1.24e-97 | 300 |
| Msa1379000 | AT3G28510.1 | 41.565 | 409 | 201 | 7 | 82 | 468 | 67 | 459 | 2.61e-96 | 301 |
| Msa1379000 | AT3G28610.1 | 39.062 | 448 | 224 | 11 | 55 | 485 | 52 | 467 | 3.28e-94 | 294 |
| Msa1379000 | AT3G28600.1 | 37.768 | 466 | 245 | 11 | 18 | 467 | 10 | 446 | 7.66e-94 | 293 |
| Msa1379000 | AT4G25835.1 | 34.316 | 475 | 279 | 10 | 27 | 485 | 9 | 466 | 6.97e-91 | 286 |
| Msa1379000 | AT3G28580.1 | 36.831 | 486 | 247 | 13 | 5 | 463 | 3 | 455 | 1.72e-89 | 282 |
| Msa1379000 | AT3G28570.2 | 36.747 | 498 | 258 | 14 | 1 | 483 | 1 | 456 | 2.32e-89 | 281 |
| Msa1379000 | AT3G28570.1 | 36.939 | 490 | 252 | 14 | 9 | 483 | 2 | 449 | 4.44e-89 | 280 |
| Msa1379000 | AT3G28540.2 | 35.532 | 470 | 260 | 8 | 19 | 464 | 4 | 454 | 1.27e-88 | 280 |
| Msa1379000 | AT3G28540.1 | 35.532 | 470 | 260 | 8 | 19 | 464 | 4 | 454 | 1.58e-88 | 280 |
| Msa1379000 | AT5G40000.1 | 36.025 | 483 | 244 | 16 | 12 | 468 | 7 | 450 | 6.14e-88 | 277 |
| Msa1379000 | AT5G40010.1 | 36.709 | 474 | 256 | 8 | 13 | 463 | 8 | 460 | 1.86e-87 | 277 |
| Msa1379000 | AT5G57480.1 | 33.548 | 465 | 273 | 7 | 27 | 467 | 9 | 461 | 3.93e-86 | 274 |
| Msa1379000 | AT3G28600.2 | 45.886 | 316 | 147 | 7 | 165 | 467 | 103 | 407 | 1.13e-81 | 260 |
| Msa1379000 | AT4G30250.1 | 33.546 | 471 | 279 | 8 | 20 | 468 | 2 | 460 | 1.61e-81 | 262 |
| Msa1379000 | AT3G28520.1 | 44.073 | 329 | 163 | 5 | 155 | 466 | 117 | 441 | 1.68e-81 | 261 |
| Msa1379000 | AT4G30250.2 | 33.546 | 471 | 279 | 8 | 20 | 468 | 4 | 462 | 2.12e-81 | 262 |
| Msa1379000 | AT3G28580.2 | 34.937 | 478 | 245 | 12 | 5 | 463 | 3 | 433 | 2.10e-77 | 250 |
| Msa1379000 | AT5G17760.2 | 41.195 | 318 | 182 | 2 | 15 | 328 | 6 | 322 | 1.23e-75 | 241 |
| Msa1379000 | AT2G46620.1 | 32.684 | 462 | 232 | 14 | 25 | 467 | 15 | 416 | 4.68e-69 | 229 |
| Msa1379000 | AT3G29800.1 | 38.068 | 352 | 162 | 10 | 123 | 465 | 74 | 378 | 1.18e-60 | 205 |
| Msa1379000 | AT4G05340.1 | 55.844 | 77 | 32 | 1 | 344 | 420 | 19 | 93 | 7.98e-21 | 87.4 |
| Msa1379000 | AT5G43010.1 | 31.902 | 163 | 88 | 6 | 249 | 404 | 163 | 309 | 1.05e-11 | 67.0 |
| Msa1379000 | AT1G45000.1 | 31.902 | 163 | 88 | 6 | 249 | 404 | 163 | 309 | 1.52e-11 | 66.6 |
| Msa1379000 | AT3G28560.1 | 26.316 | 152 | 93 | 2 | 91 | 232 | 69 | 211 | 7.81e-11 | 63.2 |
Find 84 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTTCAAATTGATCAGTTT+TGG | 0.150920 | tig0020246:-68284 | Msa1379000:CDS |
| CTGGGTCTACTTTGTCCTTA+TGG | 0.184391 | tig0020246:+64893 | None:intergenic |
| TCAAAAGACTATGAAGAAAA+TGG | 0.215368 | tig0020246:-68012 | Msa1379000:CDS |
| TGAAGTGAAACTTGGTTATT+TGG | 0.217186 | tig0020246:+68300 | None:intergenic |
| TAGAAGTTTACTTAATTTAT+TGG | 0.221662 | tig0020246:-64274 | Msa1379000:three_prime_UTR |
| TTGATGATATCAAGCTTAAA+TGG | 0.279360 | tig0020246:-68110 | Msa1379000:CDS |
| CCAGACAAAGTAAACTTTCT+AGG | 0.283489 | tig0020246:+64985 | None:intergenic |
| ATTTCTATTATATTTCTATA+TGG | 0.287169 | tig0020246:+68580 | None:intergenic |
| TTTAGTAGGGATATACTCTT+TGG | 0.296287 | tig0020246:+68230 | None:intergenic |
| GTCTGGTCTGCTTAACTATA+TGG | 0.299508 | tig0020246:-64968 | Msa1379000:CDS |
| ACCAGACAAGTTTCCAGATA+TGG | 0.299840 | tig0020246:-67503 | Msa1379000:CDS |
| TGAACAAATTGAAGAGCTAT+TGG | 0.308188 | tig0020246:-64752 | Msa1379000:CDS |
| AAACGTGGTTACTTATTATA+TGG | 0.310407 | tig0020246:-67718 | Msa1379000:CDS |
| AAAACTACAATAACATAATA+AGG | 0.310725 | tig0020246:+64536 | None:intergenic |
| AAGAACTATGTTGTTATGTT+TGG | 0.317224 | tig0020246:+68167 | None:intergenic |
| CCTAGAAAGTTTACTTTGTC+TGG | 0.319922 | tig0020246:-64985 | Msa1379000:CDS |
| TATTCACTTGTCATTTCTTA+AGG | 0.331615 | tig0020246:-64839 | Msa1379000:CDS |
| GGCCAAAGCATTCAGAATCT+TGG | 0.339174 | tig0020246:-64818 | Msa1379000:CDS |
| GAAATTTGATGTGTATGATT+TGG | 0.345687 | tig0020246:-67644 | Msa1379000:CDS |
| AATCTTGGCTTCTAATTACT+TGG | 0.360580 | tig0020246:-64803 | Msa1379000:CDS |
| AAGATTCATTCTATGCAATC+TGG | 0.364238 | tig0020246:-67883 | Msa1379000:CDS |
| ATCAAAACCATCATCATTGT+TGG | 0.393123 | tig0020246:+68071 | None:intergenic |
| AGCCAAGATTCTGAATGCTT+TGG | 0.400001 | tig0020246:+64816 | None:intergenic |
| TCCATATCTGGAAACTTGTC+TGG | 0.403332 | tig0020246:+67502 | None:intergenic |
| CTTTGGCTGCATAGTAAAGA+TGG | 0.405145 | tig0020246:+68247 | None:intergenic |
| CGACCAGGGCGCAACAATGC+TGG | 0.407208 | tig0020246:+64874 | None:intergenic |
| TCTAATTACTTGGACATTGA+AGG | 0.408423 | tig0020246:-64793 | Msa1379000:CDS |
| TTCATTTGATTCACTTGCTA+TGG | 0.411884 | tig0020246:-67827 | Msa1379000:CDS |
| TGTTGTTTATGTGTGGATAA+TGG | 0.411949 | tig0020246:+68514 | None:intergenic |
| TCTTCTTCTTTCACAAACAT+TGG | 0.424150 | tig0020246:-68465 | Msa1379000:CDS |
| TTATATGGTCCACCAGGAAC+TGG | 0.430679 | tig0020246:-67703 | Msa1379000:CDS |
| TTTAAGGGATTTGTAAGTGT+TGG | 0.439054 | tig0020246:+68203 | None:intergenic |
| ACTTACAAATCCCTTAAAGT+TGG | 0.449216 | tig0020246:-68198 | Msa1379000:CDS |
| GTTAAATCACTTTGTTTCCA+TGG | 0.449328 | tig0020246:+67859 | None:intergenic |
| ATCTAGTCTTATTGCTGCTA+TGG | 0.454061 | tig0020246:-67677 | Msa1379000:CDS |
| AAGAGAAACGACCAACCATT+GGG | 0.454644 | tig0020246:+68484 | None:intergenic |
| CAAAAGACTATGAAGAAAAT+GGG | 0.454921 | tig0020246:-68011 | Msa1379000:CDS |
| GAAGATCCTGATGTTGCTCT+TGG | 0.466250 | tig0020246:-64679 | Msa1379000:CDS |
| GAAAATTCCAACAATGATGA+TGG | 0.483127 | tig0020246:-68078 | Msa1379000:CDS |
| GATCAATTTGAAGTGAAACT+TGG | 0.486219 | tig0020246:+68292 | None:intergenic |
| AGATACTCTGCCACTACAGC+AGG | 0.486605 | tig0020246:+64712 | None:intergenic |
| GATATTTACGACGAACCATA+AGG | 0.488719 | tig0020246:-64908 | Msa1379000:CDS |
| ACTTATGATGCTATAAAAGC+AGG | 0.490362 | tig0020246:-67919 | Msa1379000:CDS |
| GTGAAACTTGGTTATTTGGT+TGG | 0.495911 | tig0020246:+68304 | None:intergenic |
| TTAACTATATGGATGGTTTG+TGG | 0.503709 | tig0020246:-64957 | Msa1379000:CDS |
| ATTGTTGCGCCCTGGTCGTA+TGG | 0.508196 | tig0020246:-64869 | Msa1379000:CDS |
| AATGATATCTGAAATTGTAA+TGG | 0.510074 | tig0020246:+64381 | None:intergenic |
| GAAGAGAAACGACCAACCAT+TGG | 0.510972 | tig0020246:+68483 | None:intergenic |
| ACATTGGTTCAGCATCATCA+TGG | 0.528828 | tig0020246:-68449 | Msa1379000:CDS |
| GCAAGTGAATCAAATGAAGC+AGG | 0.530314 | tig0020246:+67832 | None:intergenic |
| AATAAGTAACCACGTTTCCA+AGG | 0.530569 | tig0020246:+67724 | None:intergenic |
| CTATAATTGATGATTTAGAT+CGG | 0.531151 | tig0020246:-67786 | Msa1379000:CDS |
| GACCCAGCATTGTTGCGCCC+TGG | 0.532969 | tig0020246:-64877 | Msa1379000:CDS |
| AATTTCAGATATCATTCAGT+AGG | 0.538203 | tig0020246:-64374 | Msa1379000:three_prime_UTR |
| AGATGTCACCCCTGCTGTAG+TGG | 0.539506 | tig0020246:-64722 | Msa1379000:CDS |
| GACCAGGGCGCAACAATGCT+GGG | 0.539616 | tig0020246:+64875 | None:intergenic |
| GAAGCATAGAGATAAAGTAA+TGG | 0.547256 | tig0020246:-67968 | Msa1379000:CDS |
| GGTCTGCTTAACTATATGGA+TGG | 0.549195 | tig0020246:-64964 | Msa1379000:CDS |
| AGTTCCCTCTAGTATTGTAA+AGG | 0.554385 | tig0020246:-64467 | Msa1379000:three_prime_UTR |
| GATGGTTTGTGGTCAAGTTG+TGG | 0.563526 | tig0020246:-64946 | Msa1379000:CDS |
| AGTGCTCCAAGAGCAACATC+AGG | 0.565349 | tig0020246:+64673 | None:intergenic |
| TCTATTAGATGTCTCTCTCA+TGG | 0.569550 | tig0020246:+67582 | None:intergenic |
| GGTCTCATGTTGTTTATGTG+TGG | 0.571783 | tig0020246:+68507 | None:intergenic |
| TCTTAAAAGCATCATGAATG+TGG | 0.575866 | tig0020246:+68404 | None:intergenic |
| AGACATTGATTGCAATTCAG+AGG | 0.577579 | tig0020246:-67542 | Msa1379000:CDS |
| ATATGCATGTCCATACGACC+AGG | 0.580884 | tig0020246:+64859 | None:intergenic |
| TCATAAGTGCTTAAAACATG+TGG | 0.584224 | tig0020246:+67934 | None:intergenic |
| TACTTATTATATGGTCCACC+AGG | 0.593809 | tig0020246:-67709 | Msa1379000:CDS |
| GTTGGCAAGCCTTGGAAACG+TGG | 0.596762 | tig0020246:-67733 | Msa1379000:CDS |
| TGATGGAAAACAAGTAGTGG+AGG | 0.599321 | tig0020246:-68139 | Msa1379000:CDS |
| ATGATATCAAGCTTAAATGG+AGG | 0.601584 | tig0020246:-68107 | Msa1379000:CDS |
| AGTATAAGGAATATAAGCAT+AGG | 0.601948 | tig0020246:-68035 | Msa1379000:CDS |
| ATTCTATGCAATCTGGACCA+TGG | 0.603360 | tig0020246:-67876 | Msa1379000:CDS |
| GATACTCTGCCACTACAGCA+GGG | 0.619261 | tig0020246:+64713 | None:intergenic |
| CATACCTTTACAATACTAGA+GGG | 0.632099 | tig0020246:+64463 | None:intergenic |
| GCATACCTTTACAATACTAG+AGG | 0.643016 | tig0020246:+64462 | None:intergenic |
| AGAGAAACGACCAACCATTG+GGG | 0.654195 | tig0020246:+68485 | None:intergenic |
| AGTAATTTGTCACACAACTG+AGG | 0.662002 | tig0020246:+64572 | None:intergenic |
| ATACTCTGCCACTACAGCAG+GGG | 0.676441 | tig0020246:+64714 | None:intergenic |
| AATTTGTCACACAACTGAGG+AGG | 0.686396 | tig0020246:+64575 | None:intergenic |
| TATGCATGTCCATACGACCA+GGG | 0.693400 | tig0020246:+64860 | None:intergenic |
| GAGAAACGACCAACCATTGG+GGG | 0.708121 | tig0020246:+68486 | None:intergenic |
| TTTGTGGTCAAGTTGTGGAG+AGG | 0.724193 | tig0020246:-64941 | Msa1379000:CDS |
| GACAAAGTAAACTTTCTAGG+CGG | 0.728578 | tig0020246:+64988 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCTATTATATTTCTATA+TGG | + | tig0020246:64333-64352 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTACTTTTAC+GGG | - | tig0020246:65935-65954 | Msa1379000:intron | 10.0% |
| !! | TTATTCTATCAAATTATTAT+CGG | - | tig0020246:66742-66761 | Msa1379000:intron | 10.0% |
| !!! | ATGAAATTTCTAAGTTTTAA+GGG | + | tig0020246:64553-64572 | None:intergenic | 15.0% |
| !! | AAAAAGTTGTATAAAAAAGT+TGG | - | tig0020246:65159-65178 | Msa1379000:intron | 15.0% |
| !!! | TTTTTTTTTTAAACAAGCAA+TGG | - | tig0020246:66076-66095 | Msa1379000:intron | 15.0% |
| !!! | TTAATTTTAGTTTTTTGACA+CGG | + | tig0020246:66170-66189 | None:intergenic | 15.0% |
| !!! | AATTTGGTGTTATAAAAAAA+AGG | - | tig0020246:66293-66312 | Msa1379000:intron | 15.0% |
| !!! | AAAAAAAGGATTTTTAAGTT+TGG | - | tig0020246:66307-66326 | Msa1379000:intron | 15.0% |
| !!! | AAAAAAGGATTTTTAAGTTT+GGG | - | tig0020246:66308-66327 | Msa1379000:intron | 15.0% |
| !!! | AAAATTTAAGTCATTTTTAG+TGG | + | tig0020246:67313-67332 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | tig0020246:67417-67436 | Msa1379000:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | tig0020246:67418-67437 | Msa1379000:intron | 15.0% |
| !! | AAAGTGAAATATATTGTATT+GGG | - | tig0020246:67442-67461 | Msa1379000:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | tig0020246:67417-67436 | Msa1379000:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | tig0020246:67418-67437 | Msa1379000:intron | 15.0% |
| !! | AAAATGGAATATATTGTATT+GGG | - | tig0020246:67554-67573 | Msa1379000:CDS | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | tig0020246:67594-67613 | Msa1379000:CDS | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | tig0020246:67595-67614 | Msa1379000:CDS | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | tig0020246:67594-67613 | Msa1379000:CDS | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | tig0020246:67595-67614 | Msa1379000:CDS | 15.0% |
| !! | AAAACTACAATAACATAATA+AGG | + | tig0020246:68377-68396 | None:intergenic | 15.0% |
| !! | TAGAAGTTTACTTAATTTAT+TGG | - | tig0020246:68636-68655 | Msa1379000:five_prime_UTR | 15.0% |
| !! | ATGTTTATAAGATGAAAAAG+TGG | + | tig0020246:64285-64304 | None:intergenic | 20.0% |
| !!! | GATGAAATTTCTAAGTTTTA+AGG | + | tig0020246:64554-64573 | None:intergenic | 20.0% |
| !!! | TTATAGAGTTTTTTAGATCA+GGG | + | tig0020246:65110-65129 | None:intergenic | 20.0% |
| !!! | ATTATAGAGTTTTTTAGATC+AGG | + | tig0020246:65111-65130 | None:intergenic | 20.0% |
| !!! | CTATAATTGATGATTTAGAT+CGG | - | tig0020246:65124-65143 | Msa1379000:intron | 20.0% |
| !!! | TAACTGTTAAGAATTTTAAC+TGG | - | tig0020246:65590-65609 | Msa1379000:intron | 20.0% |
| !!! | TGTCTTATTTCTTACATTTA+CGG | - | tig0020246:65619-65638 | Msa1379000:intron | 20.0% |
| !!! | TGTTAGTTTATTAGATAGAT+AGG | - | tig0020246:66031-66050 | Msa1379000:intron | 20.0% |
| !!! | AAAAAAACTATTTCTATTGC+TGG | + | tig0020246:66061-66080 | None:intergenic | 20.0% |
| !! | CGGTTTAAATAATTTAGTTA+TGG | + | tig0020246:66150-66169 | None:intergenic | 20.0% |
| !! | ATAAATTATATGTTGATCGA+AGG | - | tig0020246:66264-66283 | Msa1379000:intron | 20.0% |
| !! | TTCAATGTAATCATATTTGT+TGG | + | tig0020246:66717-66736 | None:intergenic | 20.0% |
| !!! | ATAAACTTAATTTTTGACAG+TGG | + | tig0020246:67261-67280 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | tig0020246:67419-67438 | Msa1379000:intron | 20.0% |
| !! | GAAAGTGAAATATATTGTAT+TGG | - | tig0020246:67441-67460 | Msa1379000:intron | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | tig0020246:67419-67438 | Msa1379000:intron | 20.0% |
| !! | GAAAATGGAATATATTGTAT+TGG | - | tig0020246:67553-67572 | Msa1379000:CDS | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | tig0020246:67627-67646 | Msa1379000:CDS | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | tig0020246:67628-67647 | Msa1379000:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | - | tig0020246:67664-67683 | Msa1379000:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+AGG | - | tig0020246:67664-67683 | Msa1379000:CDS | 20.0% |
| !!! | AATGATATCTGAAATTGTAA+TGG | + | tig0020246:68532-68551 | None:intergenic | 20.0% |
| !! | ACTTCAAATTGATCAGTTTT+GGG | - | tig0020246:64627-64646 | Msa1379000:CDS | 25.0% |
| !!! | AAGTGTTGGATATTTTAGTA+GGG | + | tig0020246:64696-64715 | None:intergenic | 25.0% |
| !!! | TAAGTGTTGGATATTTTAGT+AGG | + | tig0020246:64697-64716 | None:intergenic | 25.0% |
| !! | GGATATTTTTCCAACTTTAA+GGG | + | tig0020246:64725-64744 | None:intergenic | 25.0% |
| !! | TGGATATTTTTCCAACTTTA+AGG | + | tig0020246:64726-64745 | None:intergenic | 25.0% |
| ! | AAGAACTATGTTGTTATGTT+TGG | + | tig0020246:64746-64765 | None:intergenic | 25.0% |
| !! | TTGATGATATCAAGCTTAAA+TGG | - | tig0020246:64800-64819 | Msa1379000:CDS | 25.0% |
| !! | TATTCCTTATACTCCTTTTT+GGG | + | tig0020246:64868-64887 | None:intergenic | 25.0% |
| !! | ATATTCCTTATACTCCTTTT+TGG | + | tig0020246:64869-64888 | None:intergenic | 25.0% |
| ! | AGTATAAGGAATATAAGCAT+AGG | - | tig0020246:64875-64894 | Msa1379000:CDS | 25.0% |
| ! | TCAAAAGACTATGAAGAAAA+TGG | - | tig0020246:64898-64917 | Msa1379000:CDS | 25.0% |
| ! | CAAAAGACTATGAAGAAAAT+GGG | - | tig0020246:64899-64918 | Msa1379000:CDS | 25.0% |
| ! | AAACGTGGTTACTTATTATA+TGG | - | tig0020246:65192-65211 | Msa1379000:intron | 25.0% |
| ! | GAAATTTGATGTGTATGATT+TGG | - | tig0020246:65266-65285 | Msa1379000:intron | 25.0% |
| !!! | CAGATATGGATTTTTTAGAT+GGG | - | tig0020246:65421-65440 | Msa1379000:intron | 25.0% |
| !!! | CTCTTTTTTTAGTTTGAGTT+TGG | - | tig0020246:65548-65567 | Msa1379000:intron | 25.0% |
| ! | TTTGAAAGAGTAGAGAAAAA+GGG | - | tig0020246:65706-65725 | Msa1379000:intron | 25.0% |
| !!! | GTTTGTTGTTGTTGTTAAAT+TGG | - | tig0020246:65897-65916 | Msa1379000:intron | 25.0% |
| ! | GTAATAATTATGGAGCAAAA+TGG | - | tig0020246:66000-66019 | Msa1379000:intron | 25.0% |
| ! | TGATCGAAGGATTTATAATT+TGG | - | tig0020246:66277-66296 | Msa1379000:intron | 25.0% |
| !!! | ATTTTTAAGTTTGGGCATTT+TGG | - | tig0020246:66316-66335 | Msa1379000:intron | 25.0% |
| !! | GTCAAAACTTTTAACAGTTA+TGG | + | tig0020246:66526-66545 | None:intergenic | 25.0% |
| !!! | TAACTGTTAAAAGTTTTGAC+TGG | - | tig0020246:66526-66545 | Msa1379000:intron | 25.0% |
| !!! | AACTGTTAAAAGTTTTGACT+GGG | - | tig0020246:66527-66546 | Msa1379000:intron | 25.0% |
| !!! | TATCTGGTTAGTCTAATTTA+GGG | + | tig0020246:66648-66667 | None:intergenic | 25.0% |
| !!! | ATATCTGGTTAGTCTAATTT+AGG | + | tig0020246:66649-66668 | None:intergenic | 25.0% |
| ! | TATGTTATTCTACTGATAAG+AGG | + | tig0020246:67070-67089 | None:intergenic | 25.0% |
| ! | TTTAGTGGTTAATAAAGTAC+TGG | + | tig0020246:67298-67317 | None:intergenic | 25.0% |
| !! | GACTTAAATTTTGCTAGTTA+AGG | - | tig0020246:67321-67340 | Msa1379000:intron | 25.0% |
| ! | TGTATAAATAAAGGGGAAAA+TGG | - | tig0020246:67538-67557 | Msa1379000:CDS | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | tig0020246:67761-67780 | Msa1379000:CDS | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | tig0020246:67762-67781 | Msa1379000:CDS | 25.0% |
| !!! | ACTTGTTTTTCTTGAAATTG+TGG | - | tig0020246:67879-67898 | Msa1379000:CDS | 25.0% |
| !! | TATTCACTTGTCATTTCTTA+AGG | - | tig0020246:68071-68090 | Msa1379000:CDS | 25.0% |
| ! | AATTTCAGATATCATTCAGT+AGG | - | tig0020246:68536-68555 | Msa1379000:five_prime_UTR | 25.0% |
| ! | TGTTGTTTATGTGTGGATAA+TGG | + | tig0020246:64399-64418 | None:intergenic | 30.0% |
| TCTTCTTCTTTCACAAACAT+TGG | - | tig0020246:64445-64464 | Msa1379000:three_prime_UTR | 30.0% | |
| !! | TCTTAAAAGCATCATGAATG+TGG | + | tig0020246:64509-64528 | None:intergenic | 30.0% |
| TGAAGTGAAACTTGGTTATT+TGG | + | tig0020246:64613-64632 | None:intergenic | 30.0% | |
| ! | GATCAATTTGAAGTGAAACT+TGG | + | tig0020246:64621-64640 | None:intergenic | 30.0% |
| ! | CACTTCAAATTGATCAGTTT+TGG | - | tig0020246:64626-64645 | Msa1379000:CDS | 30.0% |
| TTTAGTAGGGATATACTCTT+TGG | + | tig0020246:64683-64702 | None:intergenic | 30.0% | |
| TTTAAGGGATTTGTAAGTGT+TGG | + | tig0020246:64710-64729 | None:intergenic | 30.0% | |
| ACTTACAAATCCCTTAAAGT+TGG | - | tig0020246:64712-64731 | Msa1379000:CDS | 30.0% | |
| !! | AACATAGTTCTTGCTTTTGA+TGG | - | tig0020246:64754-64773 | Msa1379000:CDS | 30.0% |
| ! | TTTTGATGGAAAACAAGTAG+TGG | - | tig0020246:64768-64787 | Msa1379000:CDS | 30.0% |
| ATGATATCAAGCTTAAATGG+AGG | - | tig0020246:64803-64822 | Msa1379000:CDS | 30.0% | |
| GAAAATTCCAACAATGATGA+TGG | - | tig0020246:64832-64851 | Msa1379000:CDS | 30.0% | |
| ATCAAAACCATCATCATTGT+TGG | + | tig0020246:64842-64861 | None:intergenic | 30.0% | |
| !!! | TGGTTTTGATAATCCCAAAA+AGG | - | tig0020246:64852-64871 | Msa1379000:CDS | 30.0% |
| ! | TAATCCCAAAAAGGAGTATA+AGG | - | tig0020246:64861-64880 | Msa1379000:CDS | 30.0% |
| GAAGCATAGAGATAAAGTAA+TGG | - | tig0020246:64942-64961 | Msa1379000:CDS | 30.0% | |
| TCATAAGTGCTTAAAACATG+TGG | + | tig0020246:64979-64998 | None:intergenic | 30.0% | |
| ACTTATGATGCTATAAAAGC+AGG | - | tig0020246:64991-65010 | Msa1379000:CDS | 30.0% | |
| AAGATTCATTCTATGCAATC+TGG | - | tig0020246:65027-65046 | Msa1379000:intron | 30.0% | |
| ! | GTTAAATCACTTTGTTTCCA+TGG | + | tig0020246:65054-65073 | None:intergenic | 30.0% |
| ! | TTCATTTGATTCACTTGCTA+TGG | - | tig0020246:65083-65102 | Msa1379000:intron | 30.0% |
| !! | ATGATTTAGATCGGTTTTTG+AGG | - | tig0020246:65133-65152 | Msa1379000:intron | 30.0% |
| CCATCTAAAAAATCCATATC+TGG | + | tig0020246:65423-65442 | None:intergenic | 30.0% | |
| !!! | CCAGATATGGATTTTTTAGA+TGG | - | tig0020246:65420-65439 | Msa1379000:intron | 30.0% |
| !!! | GGATTTTTTAGATGGGATTA+AGG | - | tig0020246:65428-65447 | Msa1379000:intron | 30.0% |
| GTTTGAAAGAGTAGAGAAAA+AGG | - | tig0020246:65705-65724 | Msa1379000:intron | 30.0% | |
| TTGAAAGAGTAGAGAAAAAG+GGG | - | tig0020246:65707-65726 | Msa1379000:intron | 30.0% | |
| AGGAGAAGAAAAATAGCTAT+GGG | + | tig0020246:65756-65775 | None:intergenic | 30.0% | |
| GAGAAATAGGGTAGATTTAA+TGG | + | tig0020246:66408-66427 | None:intergenic | 30.0% | |
| TGAGAAATAGGTGAGAAATA+GGG | + | tig0020246:66420-66439 | None:intergenic | 30.0% | |
| GAGAGAAATATGTGAGAAAT+AGG | + | tig0020246:66432-66451 | None:intergenic | 30.0% | |
| GAAGTTATGAAGAGAGAAAT+AGG | + | tig0020246:66473-66492 | None:intergenic | 30.0% | |
| AACAGTTATGGAGTAACTAA+GGG | + | tig0020246:66514-66533 | None:intergenic | 30.0% | |
| TAACAGTTATGGAGTAACTA+AGG | + | tig0020246:66515-66534 | None:intergenic | 30.0% | |
| !! | ATCTGGTTAGTCTAATTTAG+GGG | + | tig0020246:66647-66666 | None:intergenic | 30.0% |
| AAATGACAATGTGTATTGTG+TGG | - | tig0020246:66878-66897 | Msa1379000:intron | 30.0% | |
| !!! | TTTGTTTTGTTCAGGTCTAA+TGG | + | tig0020246:67046-67065 | None:intergenic | 30.0% |
| !!! | TAAGAGGATTTGTTTTGTTC+AGG | + | tig0020246:67054-67073 | None:intergenic | 30.0% |
| !!! | TGATAAGACTAGTCTTTTAC+TGG | + | tig0020246:67099-67118 | None:intergenic | 30.0% |
| ATACTTTCAGCTTAACTTCT+TGG | + | tig0020246:67190-67209 | None:intergenic | 30.0% | |
| CAAAATAGGTCAATTATACC+GGG | + | tig0020246:67494-67513 | None:intergenic | 30.0% | |
| CCAAAATAGGTCAATTATAC+CGG | + | tig0020246:67495-67514 | None:intergenic | 30.0% | |
| TCTGTGTGAAAAACCAAAAT+AGG | + | tig0020246:67508-67527 | None:intergenic | 30.0% | |
| !!! | TTGAAATGGGTCAGTTTTTT+TGG | - | tig0020246:67641-67660 | Msa1379000:CDS | 30.0% |
| !!! | TGAAATGGGTCAGTTTTTTT+GGG | - | tig0020246:67642-67661 | Msa1379000:CDS | 30.0% |
| AGAAAATAGGTCAGTTATTC+CGG | - | tig0020246:67677-67696 | Msa1379000:CDS | 30.0% | |
| AGAAAATAGGTCAGTTATTC+CGG | - | tig0020246:67677-67696 | Msa1379000:CDS | 30.0% | |
| TCTTGAAATTGTGGAATAGA+TGG | - | tig0020246:67888-67907 | Msa1379000:CDS | 30.0% | |
| TTAACTATATGGATGGTTTG+TGG | - | tig0020246:67953-67972 | Msa1379000:CDS | 30.0% | |
| AATCTTGGCTTCTAATTACT+TGG | - | tig0020246:68107-68126 | Msa1379000:CDS | 30.0% | |
| TCTAATTACTTGGACATTGA+AGG | - | tig0020246:68117-68136 | Msa1379000:CDS | 30.0% | |
| TGAACAAATTGAAGAGCTAT+TGG | - | tig0020246:68158-68177 | Msa1379000:CDS | 30.0% | |
| CATACCTTTACAATACTAGA+GGG | + | tig0020246:68450-68469 | None:intergenic | 30.0% | |
| GTGAAACTTGGTTATTTGGT+TGG | + | tig0020246:64609-64628 | None:intergenic | 35.0% | |
| !!! | CAAATTGATCAGTTTTGGGA+TGG | - | tig0020246:64631-64650 | Msa1379000:CDS | 35.0% |
| !! | ATTTAGATCGGTTTTTGAGG+AGG | - | tig0020246:65136-65155 | Msa1379000:intron | 35.0% |
| ATAAAAAAGTTGGCAAGCCT+TGG | - | tig0020246:65169-65188 | Msa1379000:intron | 35.0% | |
| AATAAGTAACCACGTTTCCA+AGG | + | tig0020246:65189-65208 | None:intergenic | 35.0% | |
| TACTTATTATATGGTCCACC+AGG | - | tig0020246:65201-65220 | Msa1379000:intron | 35.0% | |
| !! | ATCTAGTCTTATTGCTGCTA+TGG | - | tig0020246:65233-65252 | Msa1379000:intron | 35.0% |
| TCTATTAGATGTCTCTCTCA+TGG | + | tig0020246:65331-65350 | None:intergenic | 35.0% | |
| ! | AGACATTGATTGCAATTCAG+AGG | - | tig0020246:65368-65387 | Msa1379000:intron | 35.0% |
| ! | TGAGTTTGGTTTCTTGAGTT+TGG | - | tig0020246:65562-65581 | Msa1379000:intron | 35.0% |
| GTTTGTTTGAAGAGAGATAG+AGG | - | tig0020246:65645-65664 | Msa1379000:intron | 35.0% | |
| GAGAGAGACCAAATATATGT+GGG | - | tig0020246:65729-65748 | Msa1379000:intron | 35.0% | |
| GGAGAAGAAAAATAGCTATG+GGG | + | tig0020246:65755-65774 | None:intergenic | 35.0% | |
| GAGGAGAAGAAAAATAGCTA+TGG | + | tig0020246:65757-65776 | None:intergenic | 35.0% | |
| AAAGTGGAAAAGCAAAAGAG+TGG | + | tig0020246:65809-65828 | None:intergenic | 35.0% | |
| CAAAGAAAGAAGGGTAAAAG+TGG | + | tig0020246:65825-65844 | None:intergenic | 35.0% | |
| AATACCAATTCAAGACAAGG+TGG | + | tig0020246:65865-65884 | None:intergenic | 35.0% | |
| AGCAATACCAATTCAAGACA+AGG | + | tig0020246:65868-65887 | None:intergenic | 35.0% | |
| TTGTCTTGAATTGGTATTGC+TGG | - | tig0020246:65867-65886 | Msa1379000:intron | 35.0% | |
| TGTCTTGAATTGGTATTGCT+GGG | - | tig0020246:65868-65887 | Msa1379000:intron | 35.0% | |
| GTGAGAAATAGGTGAGAAAT+AGG | + | tig0020246:66421-66440 | None:intergenic | 35.0% | |
| TAGACTAACCAGATATGAAG+TGG | - | tig0020246:66653-66672 | Msa1379000:intron | 35.0% | |
| TAACCAGATATGAAGTGGTT+AGG | - | tig0020246:66658-66677 | Msa1379000:intron | 35.0% | |
| ATTGTATCTATGTCGTGTCT+GGG | - | tig0020246:66769-66788 | Msa1379000:intron | 35.0% | |
| CATCCATGAGTATATTTGTG+TGG | + | tig0020246:66839-66858 | None:intergenic | 35.0% | |
| ! | ACACATTGTCATTTGCATCT+GGG | + | tig0020246:66872-66891 | None:intergenic | 35.0% |
| ! | TACACATTGTCATTTGCATC+TGG | + | tig0020246:66873-66892 | None:intergenic | 35.0% |
| ! | TTTTGTTCAGGTCTAATGGT+AGG | + | tig0020246:67042-67061 | None:intergenic | 35.0% |
| !!! | AAGACTAGTCTTTTACTGGT+TGG | + | tig0020246:67095-67114 | None:intergenic | 35.0% |
| CAAAGTAGGTCAATTAAACC+GGG | + | tig0020246:67382-67401 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | + | tig0020246:67383-67402 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | tig0020246:67396-67415 | None:intergenic | 35.0% | |
| ! | CCGGTATAATTGACCTATTT+TGG | - | tig0020246:67492-67511 | Msa1379000:CDS | 35.0% |
| GAAAATAGGTCAGTTATTCC+GGG | - | tig0020246:67678-67697 | Msa1379000:CDS | 35.0% | |
| GAAAATAGGTCAGTTATTCC+GGG | - | tig0020246:67678-67697 | Msa1379000:CDS | 35.0% | |
| GACAAAGTAAACTTTCTAGG+CGG | + | tig0020246:67925-67944 | None:intergenic | 35.0% | |
| CCAGACAAAGTAAACTTTCT+AGG | + | tig0020246:67928-67947 | None:intergenic | 35.0% | |
| CCTAGAAAGTTTACTTTGTC+TGG | - | tig0020246:67925-67944 | Msa1379000:CDS | 35.0% | |
| GATATTTACGACGAACCATA+AGG | - | tig0020246:68002-68021 | Msa1379000:CDS | 35.0% | |
| ! | AGTAATTTGTCACACAACTG+AGG | + | tig0020246:68341-68360 | None:intergenic | 35.0% |
| ! | GCAATGTTTGCTTCTTTTAC+AGG | + | tig0020246:68422-68441 | None:intergenic | 35.0% |
| AGTTCCCTCTAGTATTGTAA+AGG | - | tig0020246:68443-68462 | Msa1379000:CDS | 35.0% | |
| GCATACCTTTACAATACTAG+AGG | + | tig0020246:68451-68470 | None:intergenic | 35.0% | |
| ! | GGTCTCATGTTGTTTATGTG+TGG | + | tig0020246:64406-64425 | None:intergenic | 40.0% |
| AAGAGAAACGACCAACCATT+GGG | + | tig0020246:64429-64448 | None:intergenic | 40.0% | |
| !! | ACATTGGTTCAGCATCATCA+TGG | - | tig0020246:64461-64480 | Msa1379000:three_prime_UTR | 40.0% |
| CTTTGGCTGCATAGTAAAGA+TGG | + | tig0020246:64666-64685 | None:intergenic | 40.0% | |
| TGATGGAAAACAAGTAGTGG+AGG | - | tig0020246:64771-64790 | Msa1379000:CDS | 40.0% | |
| ATTCTATGCAATCTGGACCA+TGG | - | tig0020246:65034-65053 | Msa1379000:intron | 40.0% | |
| GCAAGTGAATCAAATGAAGC+AGG | + | tig0020246:65081-65100 | None:intergenic | 40.0% | |
| ! | AGACTAGATTTTCCAGTTCC+TGG | + | tig0020246:65222-65241 | None:intergenic | 40.0% |
| ACCAGACAAGTTTCCAGATA+TGG | - | tig0020246:65407-65426 | Msa1379000:intron | 40.0% | |
| TCCATATCTGGAAACTTGTC+TGG | + | tig0020246:65411-65430 | None:intergenic | 40.0% | |
| GGAGAGAGACCAAATATATG+TGG | - | tig0020246:65728-65747 | Msa1379000:intron | 40.0% | |
| TGCATTTCTTCGCTGTTTAG+AGG | + | tig0020246:65776-65795 | None:intergenic | 40.0% | |
| CACAGCTTGCAAAGAAAGAA+GGG | + | tig0020246:65834-65853 | None:intergenic | 40.0% | |
| TATGGAGCAAAATGGATAGC+AGG | - | tig0020246:66008-66027 | Msa1379000:intron | 40.0% | |
| ! | AACTAAGGGTGTGTTTGGTT+CGG | + | tig0020246:66500-66519 | None:intergenic | 40.0% |
| CATTGTATCTATGTCGTGTC+TGG | - | tig0020246:66768-66787 | Msa1379000:intron | 40.0% | |
| TCGTGTCTGGGAAAATACTT+GGG | - | tig0020246:66781-66800 | Msa1379000:intron | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | - | tig0020246:66812-66831 | Msa1379000:intron | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | - | tig0020246:66813-66832 | Msa1379000:intron | 40.0% | |
| GTGGCTCAGATTTAATGTCA+CGG | - | tig0020246:66897-66916 | Msa1379000:intron | 40.0% | |
| ! | CAATGGATTCGTTCAAACAG+TGG | + | tig0020246:66984-67003 | None:intergenic | 40.0% |
| CACTGTTTGAACGAATCCAT+TGG | - | tig0020246:66982-67001 | Msa1379000:intron | 40.0% | |
| !! | AATTGCTAGTTCTAGCAGAG+AGG | + | tig0020246:67146-67165 | None:intergenic | 40.0% |
| CCGGTTTAATTGACCTACTT+TGG | - | tig0020246:67380-67399 | Msa1379000:intron | 40.0% | |
| ATAGGTCAATTATACCGGGA+CGG | + | tig0020246:67490-67509 | None:intergenic | 40.0% | |
| GTCTGGTCTGCTTAACTATA+TGG | - | tig0020246:67942-67961 | Msa1379000:CDS | 40.0% | |
| GGTCTGCTTAACTATATGGA+TGG | - | tig0020246:67946-67965 | Msa1379000:CDS | 40.0% | |
| AGCCAAGATTCTGAATGCTT+TGG | + | tig0020246:68097-68116 | None:intergenic | 40.0% | |
| AATTTGTCACACAACTGAGG+AGG | + | tig0020246:68338-68357 | None:intergenic | 40.0% | |
| AAACAACATGAGACCCCCAA+TGG | - | tig0020246:64411-64430 | Msa1379000:three_prime_UTR | 45.0% | |
| AGAGAAACGACCAACCATTG+GGG | + | tig0020246:64428-64447 | None:intergenic | 45.0% | |
| GAAGAGAAACGACCAACCAT+TGG | + | tig0020246:64430-64449 | None:intergenic | 45.0% | |
| TTATATGGTCCACCAGGAAC+TGG | - | tig0020246:65207-65226 | Msa1379000:intron | 45.0% | |
| ! | CTAGATTTTCCAGTTCCTGG+TGG | + | tig0020246:65219-65238 | None:intergenic | 45.0% |
| GATAGAGGAGAGAGAGATAG+AGG | - | tig0020246:65660-65679 | Msa1379000:intron | 45.0% | |
| CTATGGGGCCCACATATATT+TGG | + | tig0020246:65740-65759 | None:intergenic | 45.0% | |
| GCACAGCTTGCAAAGAAAGA+AGG | + | tig0020246:65835-65854 | None:intergenic | 45.0% | |
| ! | GGAGTAACTAAGGGTGTGTT+TGG | + | tig0020246:66505-66524 | None:intergenic | 45.0% |
| ACGCCTAACCACTTCATATC+TGG | + | tig0020246:66664-66683 | None:intergenic | 45.0% | |
| GTCGTGTCTGGGAAAATACT+TGG | - | tig0020246:66780-66799 | Msa1379000:intron | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | + | tig0020246:66820-66839 | None:intergenic | 45.0% | |
| GGGCCACACAAATATACTCA+TGG | - | tig0020246:66833-66852 | Msa1379000:intron | 45.0% | |
| ACATACACTACCAGACACGA+CGG | + | tig0020246:66948-66967 | None:intergenic | 45.0% | |
| TTCAGGTCTAATGGTAGGTG+AGG | + | tig0020246:67037-67056 | None:intergenic | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | + | tig0020246:67378-67397 | None:intergenic | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | - | tig0020246:67682-67701 | Msa1379000:CDS | 45.0% | |
| AAATAATACTCCCTCCGTCC+CGG | + | tig0020246:67699-67718 | None:intergenic | 45.0% | |
| ATAGGTCAGTTATTCCGGGA+CGG | - | tig0020246:67682-67701 | Msa1379000:CDS | 45.0% | |
| ! | GATGGTTTGTGGTCAAGTTG+TGG | - | tig0020246:67964-67983 | Msa1379000:CDS | 45.0% |
| ! | TTTGTGGTCAAGTTGTGGAG+AGG | - | tig0020246:67969-67988 | Msa1379000:CDS | 45.0% |
| CTGGGTCTACTTTGTCCTTA+TGG | + | tig0020246:68020-68039 | None:intergenic | 45.0% | |
| TATGCATGTCCATACGACCA+GGG | + | tig0020246:68053-68072 | None:intergenic | 45.0% | |
| ATATGCATGTCCATACGACC+AGG | + | tig0020246:68054-68073 | None:intergenic | 45.0% | |
| ! | GGCCAAAGCATTCAGAATCT+TGG | - | tig0020246:68092-68111 | Msa1379000:CDS | 45.0% |
| GAAGATCCTGATGTTGCTCT+TGG | - | tig0020246:68231-68250 | Msa1379000:CDS | 45.0% | |
| !!! | TTTTTTTTTTTTTACTTTTA+CGG | - | tig0020246:65934-65953 | Msa1379000:intron | 5.0% |
| !! | ATTAATTATAGTAATAATTA+TGG | - | tig0020246:65990-66009 | Msa1379000:intron | 5.0% |
| AACATGAGACCCCCAATGGT+TGG | - | tig0020246:64415-64434 | Msa1379000:three_prime_UTR | 50.0% | |
| GAGAAACGACCAACCATTGG+GGG | + | tig0020246:64427-64446 | None:intergenic | 50.0% | |
| CTGGCCACCTTGTCTTGAAT+TGG | - | tig0020246:65858-65877 | Msa1379000:intron | 50.0% | |
| GTCAATTAAACCGGGACGGA+GGG | + | tig0020246:67374-67393 | None:intergenic | 50.0% | |
| AAGTAGTACTACCTCCGTCC+CGG | - | tig0020246:67473-67492 | Msa1379000:intron | 50.0% | |
| ATACTCTGCCACTACAGCAG+GGG | + | tig0020246:68199-68218 | None:intergenic | 50.0% | |
| GATACTCTGCCACTACAGCA+GGG | + | tig0020246:68200-68219 | None:intergenic | 50.0% | |
| AGATACTCTGCCACTACAGC+AGG | + | tig0020246:68201-68220 | None:intergenic | 50.0% | |
| AGTGCTCCAAGAGCAACATC+AGG | + | tig0020246:68240-68259 | None:intergenic | 50.0% | |
| GTTGGCAAGCCTTGGAAACG+TGG | - | tig0020246:65177-65196 | Msa1379000:intron | 55.0% | |
| TCTTTGCAAGCTGTGCACGC+TGG | - | tig0020246:65839-65858 | Msa1379000:intron | 55.0% | |
| GAAGTGGTTAGGCGTGTCTC+AGG | - | tig0020246:66669-66688 | Msa1379000:intron | 55.0% | |
| AGACACGACGGACAGCACTT+GGG | + | tig0020246:66936-66955 | None:intergenic | 55.0% | |
| CCTCTTCGCACGCATTCCAA+TGG | + | tig0020246:67001-67020 | None:intergenic | 55.0% | |
| CCATTGGAATGCGTGCGAAG+AGG | - | tig0020246:66998-67017 | Msa1379000:intron | 55.0% | |
| TGGTAGGTGAGGCAGCAAGT+GGG | + | tig0020246:67026-67045 | None:intergenic | 55.0% | |
| ATGGTAGGTGAGGCAGCAAG+TGG | + | tig0020246:67027-67046 | None:intergenic | 55.0% | |
| AACTAGTACTCCCTCCGTCC+CGG | - | tig0020246:67361-67380 | Msa1379000:intron | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | + | tig0020246:67375-67394 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | + | tig0020246:67487-67506 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | tig0020246:67686-67705 | Msa1379000:CDS | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | tig0020246:67686-67705 | Msa1379000:CDS | 55.0% | |
| AAGTAGTACTCCCTCCGTCC+CGG | + | tig0020246:67819-67838 | None:intergenic | 55.0% | |
| ATTGTTGCGCCCTGGTCGTA+TGG | - | tig0020246:68041-68060 | Msa1379000:CDS | 55.0% | |
| AGATGTCACCCCTGCTGTAG+TGG | - | tig0020246:68188-68207 | Msa1379000:CDS | 55.0% | |
| CAGACACGACGGACAGCACT+TGG | + | tig0020246:66937-66956 | None:intergenic | 60.0% | |
| ! | CAAGTGCTGTCCGTCGTGTC+TGG | - | tig0020246:66935-66954 | Msa1379000:intron | 60.0% |
| GGTCAGTTATTCCGGGACGG+AGG | - | tig0020246:67685-67704 | Msa1379000:CDS | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | tig0020246:67685-67704 | Msa1379000:CDS | 60.0% | |
| GACCAGGGCGCAACAATGCT+GGG | + | tig0020246:68038-68057 | None:intergenic | 60.0% | |
| GACCCAGCATTGTTGCGCCC+TGG | - | tig0020246:68033-68052 | Msa1379000:CDS | 65.0% | |
| CGACCAGGGCGCAACAATGC+TGG | + | tig0020246:68039-68058 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020246 | gene | 64257 | 68675 | 64257 | ID=Msa1379000;Name=Msa1379000 |
| tig0020246 | mRNA | 64257 | 68675 | 64257 | ID=Msa1379000-mRNA-1;Parent=Msa1379000;Name=Msa1379000-mRNA-1;_AED=0.22;_eAED=0.22;_QI=161|1|1|1|1|1|2|343|485 |
| tig0020246 | exon | 64257 | 65025 | 64257 | ID=Msa1379000-mRNA-1:exon:6331;Parent=Msa1379000-mRNA-1 |
| tig0020246 | exon | 67483 | 68675 | 67483 | ID=Msa1379000-mRNA-1:exon:6330;Parent=Msa1379000-mRNA-1 |
| tig0020246 | five_prime_UTR | 68515 | 68675 | 68515 | ID=Msa1379000-mRNA-1:five_prime_utr;Parent=Msa1379000-mRNA-1 |
| tig0020246 | CDS | 67483 | 68514 | 67483 | ID=Msa1379000-mRNA-1:cds;Parent=Msa1379000-mRNA-1 |
| tig0020246 | CDS | 64600 | 65025 | 64600 | ID=Msa1379000-mRNA-1:cds;Parent=Msa1379000-mRNA-1 |
| tig0020246 | three_prime_UTR | 64257 | 64599 | 64257 | ID=Msa1379000-mRNA-1:three_prime_utr;Parent=Msa1379000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
