Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28345.t1 | XP_013456290.1 | 98.1 | 264 | 5 | 0 | 1 | 264 | 1 | 264 | 6.70E-125 | 456.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28345.t1 | Q9LX31 | 59.3 | 189 | 70 | 2 | 79 | 264 | 81 | 265 | 7.9e-58 | 225.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28345.t1 | A0A072ULR7 | 98.1 | 264 | 5 | 0 | 1 | 264 | 1 | 264 | 4.8e-125 | 456.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene28345 | 0.820853 | 5.51E-53 | -1.69E-46 |
MS.gene049171 | MS.gene28345 | 0.905482 | 4.10E-80 | -1.69E-46 |
MS.gene049173 | MS.gene28345 | 0.873181 | 1.79E-67 | -1.69E-46 |
MS.gene049217 | MS.gene28345 | 0.912846 | 1.22E-83 | -1.69E-46 |
MS.gene049222 | MS.gene28345 | 0.916126 | 2.59E-85 | -1.69E-46 |
MS.gene049232 | MS.gene28345 | 0.88754 | 1.30E-72 | -1.69E-46 |
MS.gene049285 | MS.gene28345 | 0.943195 | 1.86E-102 | -1.69E-46 |
MS.gene049313 | MS.gene28345 | -0.803412 | 3.53E-49 | -1.69E-46 |
MS.gene049320 | MS.gene28345 | 0.951043 | 4.68E-109 | -1.69E-46 |
MS.gene04939 | MS.gene28345 | 0.818437 | 1.96E-52 | -1.69E-46 |
MS.gene049427 | MS.gene28345 | 0.836526 | 8.89E-57 | -1.69E-46 |
MS.gene049600 | MS.gene28345 | 0.814603 | 1.42E-51 | -1.69E-46 |
MS.gene049609 | MS.gene28345 | 0.895517 | 8.89E-76 | -1.69E-46 |
MS.gene049611 | MS.gene28345 | -0.816312 | 5.90E-52 | -1.69E-46 |
MS.gene049615 | MS.gene28345 | 0.802715 | 4.92E-49 | -1.69E-46 |
MS.gene049627 | MS.gene28345 | 0.856851 | 2.43E-62 | -1.69E-46 |
MS.gene049633 | MS.gene28345 | 0.876837 | 1.02E-68 | -1.69E-46 |
MS.gene049805 | MS.gene28345 | 0.881939 | 1.58E-70 | -1.69E-46 |
MS.gene05010 | MS.gene28345 | 0.899035 | 2.95E-77 | -1.69E-46 |
MS.gene050163 | MS.gene28345 | 0.934699 | 2.70E-96 | -1.69E-46 |
MS.gene050165 | MS.gene28345 | 0.91964 | 3.50E-87 | -1.69E-46 |
MS.gene050170 | MS.gene28345 | 0.827411 | 1.59E-54 | -1.69E-46 |
MS.gene050216 | MS.gene28345 | 0.848546 | 5.72E-60 | -1.69E-46 |
MS.gene050323 | MS.gene28345 | 0.862116 | 6.36E-64 | -1.69E-46 |
MS.gene050333 | MS.gene28345 | 0.904913 | 7.46E-80 | -1.69E-46 |
MS.gene050353 | MS.gene28345 | -0.812418 | 4.28E-51 | -1.69E-46 |
MS.gene050380 | MS.gene28345 | -0.80033 | 1.52E-48 | -1.69E-46 |
MS.gene050381 | MS.gene28345 | -0.841414 | 4.82E-58 | -1.69E-46 |
MS.gene050432 | MS.gene28345 | 0.802825 | 4.67E-49 | -1.69E-46 |
MS.gene050444 | MS.gene28345 | 0.825881 | 3.68E-54 | -1.69E-46 |
MS.gene050496 | MS.gene28345 | 0.847678 | 9.93E-60 | -1.69E-46 |
MS.gene050504 | MS.gene28345 | 0.93156 | 3.15E-94 | -1.69E-46 |
MS.gene050518 | MS.gene28345 | 0.930729 | 1.07E-93 | -1.69E-46 |
MS.gene050520 | MS.gene28345 | 0.815714 | 8.03E-52 | -1.69E-46 |
MS.gene050538 | MS.gene28345 | 0.847676 | 9.95E-60 | -1.69E-46 |
MS.gene050577 | MS.gene28345 | 0.900155 | 9.72E-78 | -1.69E-46 |
MS.gene050593 | MS.gene28345 | 0.857935 | 1.16E-62 | -1.69E-46 |
MS.gene050612 | MS.gene28345 | 0.928444 | 2.86E-92 | -1.69E-46 |
MS.gene050647 | MS.gene28345 | -0.808604 | 2.85E-50 | -1.69E-46 |
MS.gene050662 | MS.gene28345 | 0.85569 | 5.33E-62 | -1.69E-46 |
MS.gene050675 | MS.gene28345 | 0.904017 | 1.90E-79 | -1.69E-46 |
MS.gene050686 | MS.gene28345 | 0.838437 | 2.88E-57 | -1.69E-46 |
MS.gene050690 | MS.gene28345 | 0.806848 | 6.74E-50 | -1.69E-46 |
MS.gene050699 | MS.gene28345 | 0.934152 | 6.28E-96 | -1.69E-46 |
MS.gene050747 | MS.gene28345 | 0.89259 | 1.38E-74 | -1.69E-46 |
MS.gene050767 | MS.gene28345 | 0.84554 | 3.81E-59 | -1.69E-46 |
MS.gene050770 | MS.gene28345 | 0.846419 | 2.20E-59 | -1.69E-46 |
MS.gene050772 | MS.gene28345 | 0.92841 | 3.01E-92 | -1.69E-46 |
MS.gene05080 | MS.gene28345 | 0.879758 | 9.60E-70 | -1.69E-46 |
MS.gene050868 | MS.gene28345 | 0.873985 | 9.61E-68 | -1.69E-46 |
MS.gene050871 | MS.gene28345 | 0.873398 | 1.52E-67 | -1.69E-46 |
MS.gene050876 | MS.gene28345 | 0.837773 | 4.27E-57 | -1.69E-46 |
MS.gene050883 | MS.gene28345 | -0.801855 | 7.39E-49 | -1.69E-46 |
MS.gene050904 | MS.gene28345 | 0.823261 | 1.52E-53 | -1.69E-46 |
MS.gene050950 | MS.gene28345 | 0.891401 | 4.11E-74 | -1.69E-46 |
MS.gene050986 | MS.gene28345 | 0.929457 | 6.77E-93 | -1.69E-46 |
MS.gene05100 | MS.gene28345 | 0.904844 | 8.02E-80 | -1.69E-46 |
MS.gene05104 | MS.gene28345 | -0.817987 | 2.48E-52 | -1.69E-46 |
MS.gene05105 | MS.gene28345 | 0.808745 | 2.66E-50 | -1.69E-46 |
MS.gene051127 | MS.gene28345 | -0.813311 | 2.73E-51 | -1.69E-46 |
MS.gene051167 | MS.gene28345 | -0.825201 | 5.33E-54 | -1.69E-46 |
MS.gene051228 | MS.gene28345 | 0.850902 | 1.26E-60 | -1.69E-46 |
MS.gene051268 | MS.gene28345 | 0.803219 | 3.87E-49 | -1.69E-46 |
MS.gene051317 | MS.gene28345 | 0.843749 | 1.16E-58 | -1.69E-46 |
MS.gene051364 | MS.gene28345 | -0.801059 | 1.08E-48 | -1.69E-46 |
MS.gene051387 | MS.gene28345 | 0.816314 | 5.89E-52 | -1.69E-46 |
MS.gene051509 | MS.gene28345 | 0.835312 | 1.81E-56 | -1.69E-46 |
MS.gene051551 | MS.gene28345 | 0.919423 | 4.59E-87 | -1.69E-46 |
MS.gene051564 | MS.gene28345 | 0.805433 | 1.34E-49 | -1.69E-46 |
MS.gene051666 | MS.gene28345 | 0.86229 | 5.63E-64 | -1.69E-46 |
MS.gene051692 | MS.gene28345 | 0.817515 | 3.17E-52 | -1.69E-46 |
MS.gene051694 | MS.gene28345 | 0.857251 | 1.85E-62 | -1.69E-46 |
MS.gene051734 | MS.gene28345 | 0.801255 | 9.82E-49 | -1.69E-46 |
MS.gene051810 | MS.gene28345 | 0.917707 | 3.82E-86 | -1.69E-46 |
MS.gene051838 | MS.gene28345 | 0.80629 | 8.84E-50 | -1.69E-46 |
MS.gene051858 | MS.gene28345 | 0.876461 | 1.37E-68 | -1.69E-46 |
MS.gene051874 | MS.gene28345 | 0.812601 | 3.91E-51 | -1.69E-46 |
MS.gene051949 | MS.gene28345 | 0.853753 | 1.94E-61 | -1.69E-46 |
MS.gene052164 | MS.gene28345 | 0.887973 | 8.91E-73 | -1.69E-46 |
MS.gene052271 | MS.gene28345 | 0.913814 | 3.97E-84 | -1.69E-46 |
MS.gene052379 | MS.gene28345 | 0.87245 | 3.15E-67 | -1.69E-46 |
MS.gene052421 | MS.gene28345 | 0.827786 | 1.29E-54 | -1.69E-46 |
MS.gene052482 | MS.gene28345 | 0.871001 | 9.52E-67 | -1.69E-46 |
MS.gene052484 | MS.gene28345 | 0.804244 | 2.37E-49 | -1.69E-46 |
MS.gene052486 | MS.gene28345 | 0.876351 | 1.50E-68 | -1.69E-46 |
MS.gene052501 | MS.gene28345 | 0.809865 | 1.53E-50 | -1.69E-46 |
MS.gene052503 | MS.gene28345 | 0.863579 | 2.25E-64 | -1.69E-46 |
MS.gene052504 | MS.gene28345 | 0.804824 | 1.79E-49 | -1.69E-46 |
MS.gene052506 | MS.gene28345 | 0.85011 | 2.10E-60 | -1.69E-46 |
MS.gene052615 | MS.gene28345 | 0.888156 | 7.58E-73 | -1.69E-46 |
MS.gene052670 | MS.gene28345 | 0.840448 | 8.64E-58 | -1.69E-46 |
MS.gene052822 | MS.gene28345 | 0.861069 | 1.33E-63 | -1.69E-46 |
MS.gene052823 | MS.gene28345 | 0.856136 | 3.94E-62 | -1.69E-46 |
MS.gene052825 | MS.gene28345 | 0.850526 | 1.60E-60 | -1.69E-46 |
MS.gene052870 | MS.gene28345 | 0.816385 | 5.68E-52 | -1.69E-46 |
MS.gene052872 | MS.gene28345 | 0.827702 | 1.35E-54 | -1.69E-46 |
MS.gene052916 | MS.gene28345 | 0.884522 | 1.78E-71 | -1.69E-46 |
MS.gene052966 | MS.gene28345 | 0.842233 | 2.93E-58 | -1.69E-46 |
MS.gene053009 | MS.gene28345 | 0.862038 | 6.72E-64 | -1.69E-46 |
MS.gene053018 | MS.gene28345 | 0.822814 | 1.94E-53 | -1.69E-46 |
MS.gene053104 | MS.gene28345 | 0.836393 | 9.61E-57 | -1.69E-46 |
MS.gene053203 | MS.gene28345 | 0.887118 | 1.89E-72 | -1.69E-46 |
MS.gene053207 | MS.gene28345 | 0.892278 | 1.84E-74 | -1.69E-46 |
MS.gene053213 | MS.gene28345 | 0.943976 | 4.54E-103 | -1.69E-46 |
MS.gene053286 | MS.gene28345 | 0.941483 | 3.85E-101 | -1.69E-46 |
MS.gene053322 | MS.gene28345 | 0.869813 | 2.34E-66 | -1.69E-46 |
MS.gene053420 | MS.gene28345 | -0.833537 | 5.04E-56 | -1.69E-46 |
MS.gene053436 | MS.gene28345 | 0.875579 | 2.76E-68 | -1.69E-46 |
MS.gene053479 | MS.gene28345 | 0.814053 | 1.87E-51 | -1.69E-46 |
MS.gene053480 | MS.gene28345 | 0.833229 | 6.01E-56 | -1.69E-46 |
MS.gene053561 | MS.gene28345 | -0.831232 | 1.88E-55 | -1.69E-46 |
MS.gene053574 | MS.gene28345 | 0.914892 | 1.12E-84 | -1.69E-46 |
MS.gene053626 | MS.gene28345 | 0.873468 | 1.44E-67 | -1.69E-46 |
MS.gene053632 | MS.gene28345 | 0.902947 | 5.75E-79 | -1.69E-46 |
MS.gene053633 | MS.gene28345 | 0.801118 | 1.05E-48 | -1.69E-46 |
MS.gene053813 | MS.gene28345 | 0.816717 | 4.79E-52 | -1.69E-46 |
MS.gene053824 | MS.gene28345 | 0.862649 | 4.36E-64 | -1.69E-46 |
MS.gene053916 | MS.gene28345 | 0.857374 | 1.71E-62 | -1.69E-46 |
MS.gene054003 | MS.gene28345 | 0.837664 | 4.55E-57 | -1.69E-46 |
MS.gene054376 | MS.gene28345 | 0.815404 | 9.40E-52 | -1.69E-46 |
MS.gene054408 | MS.gene28345 | 0.873577 | 1.32E-67 | -1.69E-46 |
MS.gene054595 | MS.gene28345 | 0.888283 | 6.77E-73 | -1.69E-46 |
MS.gene054600 | MS.gene28345 | 0.900732 | 5.46E-78 | -1.69E-46 |
MS.gene054616 | MS.gene28345 | -0.807905 | 4.02E-50 | -1.69E-46 |
MS.gene054642 | MS.gene28345 | 0.945664 | 2.00E-104 | -1.69E-46 |
MS.gene054706 | MS.gene28345 | -0.825001 | 5.95E-54 | -1.69E-46 |
MS.gene054708 | MS.gene28345 | -0.809045 | 2.30E-50 | -1.69E-46 |
MS.gene05470 | MS.gene28345 | 0.872078 | 4.19E-67 | -1.69E-46 |
MS.gene054802 | MS.gene28345 | 0.803607 | 3.22E-49 | -1.69E-46 |
MS.gene054803 | MS.gene28345 | 0.800579 | 1.35E-48 | -1.69E-46 |
MS.gene054804 | MS.gene28345 | 0.805093 | 1.58E-49 | -1.69E-46 |
MS.gene054927 | MS.gene28345 | 0.865901 | 4.22E-65 | -1.69E-46 |
MS.gene054954 | MS.gene28345 | 0.931235 | 5.10E-94 | -1.69E-46 |
MS.gene05505 | MS.gene28345 | 0.859297 | 4.56E-63 | -1.69E-46 |
MS.gene055154 | MS.gene28345 | -0.854321 | 1.33E-61 | -1.69E-46 |
MS.gene055206 | MS.gene28345 | 0.864613 | 1.07E-64 | -1.69E-46 |
MS.gene055212 | MS.gene28345 | 0.860532 | 1.93E-63 | -1.69E-46 |
MS.gene055224 | MS.gene28345 | 0.839331 | 1.69E-57 | -1.69E-46 |
MS.gene055289 | MS.gene28345 | 0.837377 | 5.39E-57 | -1.69E-46 |
MS.gene055362 | MS.gene28345 | 0.942617 | 5.23E-102 | -1.69E-46 |
MS.gene055397 | MS.gene28345 | 0.86215 | 6.21E-64 | -1.69E-46 |
MS.gene055499 | MS.gene28345 | 0.866728 | 2.31E-65 | -1.69E-46 |
MS.gene055502 | MS.gene28345 | 0.922181 | 1.37E-88 | -1.69E-46 |
MS.gene055577 | MS.gene28345 | 0.894552 | 2.22E-75 | -1.69E-46 |
MS.gene055629 | MS.gene28345 | 0.80363 | 3.18E-49 | -1.69E-46 |
MS.gene055634 | MS.gene28345 | 0.82524 | 5.22E-54 | -1.69E-46 |
MS.gene055636 | MS.gene28345 | 0.841491 | 4.60E-58 | -1.69E-46 |
MS.gene055638 | MS.gene28345 | 0.853684 | 2.03E-61 | -1.69E-46 |
MS.gene055647 | MS.gene28345 | 0.878027 | 3.91E-69 | -1.69E-46 |
MS.gene055722 | MS.gene28345 | 0.924561 | 5.98E-90 | -1.69E-46 |
MS.gene055748 | MS.gene28345 | 0.866587 | 2.56E-65 | -1.69E-46 |
MS.gene055750 | MS.gene28345 | 0.875613 | 2.68E-68 | -1.69E-46 |
MS.gene055751 | MS.gene28345 | 0.866892 | 2.04E-65 | -1.69E-46 |
MS.gene055776 | MS.gene28345 | 0.868252 | 7.50E-66 | -1.69E-46 |
MS.gene055849 | MS.gene28345 | 0.803807 | 2.92E-49 | -1.69E-46 |
MS.gene05589 | MS.gene28345 | 0.85169 | 7.53E-61 | -1.69E-46 |
MS.gene05592 | MS.gene28345 | 0.861363 | 1.08E-63 | -1.69E-46 |
MS.gene055941 | MS.gene28345 | 0.867049 | 1.82E-65 | -1.69E-46 |
MS.gene055954 | MS.gene28345 | 0.810591 | 1.07E-50 | -1.69E-46 |
MS.gene055956 | MS.gene28345 | -0.823776 | 1.15E-53 | -1.69E-46 |
MS.gene056040 | MS.gene28345 | 0.809728 | 1.64E-50 | -1.69E-46 |
MS.gene056046 | MS.gene28345 | 0.830327 | 3.13E-55 | -1.69E-46 |
MS.gene056083 | MS.gene28345 | 0.889545 | 2.20E-73 | -1.69E-46 |
MS.gene056166 | MS.gene28345 | 0.812581 | 3.95E-51 | -1.69E-46 |
MS.gene056374 | MS.gene28345 | 0.916559 | 1.54E-85 | -1.69E-46 |
MS.gene056409 | MS.gene28345 | 0.849516 | 3.08E-60 | -1.69E-46 |
MS.gene056422 | MS.gene28345 | 0.811045 | 8.52E-51 | -1.69E-46 |
MS.gene056446 | MS.gene28345 | 0.840118 | 1.05E-57 | -1.69E-46 |
MS.gene056448 | MS.gene28345 | 0.831532 | 1.58E-55 | -1.69E-46 |
MS.gene056449 | MS.gene28345 | 0.829496 | 4.98E-55 | -1.69E-46 |
MS.gene056487 | MS.gene28345 | 0.830714 | 2.51E-55 | -1.69E-46 |
MS.gene056504 | MS.gene28345 | 0.893637 | 5.22E-75 | -1.69E-46 |
MS.gene056510 | MS.gene28345 | 0.91842 | 1.59E-86 | -1.69E-46 |
MS.gene056549 | MS.gene28345 | 0.86127 | 1.15E-63 | -1.69E-46 |
MS.gene056550 | MS.gene28345 | -0.825894 | 3.65E-54 | -1.69E-46 |
MS.gene056610 | MS.gene28345 | 0.839746 | 1.32E-57 | -1.69E-46 |
MS.gene056657 | MS.gene28345 | 0.953456 | 2.64E-111 | -1.69E-46 |
MS.gene056692 | MS.gene28345 | 0.872527 | 2.97E-67 | -1.69E-46 |
MS.gene056878 | MS.gene28345 | 0.800096 | 1.69E-48 | -1.69E-46 |
MS.gene056897 | MS.gene28345 | 0.807782 | 4.27E-50 | -1.69E-46 |
MS.gene056898 | MS.gene28345 | 0.81626 | 6.06E-52 | -1.69E-46 |
MS.gene056942 | MS.gene28345 | 0.808288 | 3.33E-50 | -1.69E-46 |
MS.gene056946 | MS.gene28345 | 0.820857 | 5.50E-53 | -1.69E-46 |
MS.gene057011 | MS.gene28345 | 0.830387 | 3.02E-55 | -1.69E-46 |
MS.gene057014 | MS.gene28345 | -0.800857 | 1.18E-48 | -1.69E-46 |
MS.gene057076 | MS.gene28345 | 0.859994 | 2.81E-63 | -1.69E-46 |
MS.gene057086 | MS.gene28345 | 0.8177 | 2.88E-52 | -1.69E-46 |
MS.gene057129 | MS.gene28345 | 0.894931 | 1.55E-75 | -1.69E-46 |
MS.gene057146 | MS.gene28345 | 0.843811 | 1.11E-58 | -1.69E-46 |
MS.gene057246 | MS.gene28345 | 0.802914 | 4.47E-49 | -1.69E-46 |
MS.gene057331 | MS.gene28345 | 0.878106 | 3.67E-69 | -1.69E-46 |
MS.gene057416 | MS.gene28345 | 0.90835 | 1.88E-81 | -1.69E-46 |
MS.gene057658 | MS.gene28345 | 0.833148 | 6.30E-56 | -1.69E-46 |
MS.gene057734 | MS.gene28345 | 0.821391 | 4.14E-53 | -1.69E-46 |
MS.gene057775 | MS.gene28345 | 0.803481 | 3.42E-49 | -1.69E-46 |
MS.gene057831 | MS.gene28345 | 0.875558 | 2.80E-68 | -1.69E-46 |
MS.gene05787 | MS.gene28345 | 0.835076 | 2.07E-56 | -1.69E-46 |
MS.gene057926 | MS.gene28345 | 0.847684 | 9.90E-60 | -1.69E-46 |
MS.gene058019 | MS.gene28345 | 0.864902 | 8.71E-65 | -1.69E-46 |
MS.gene058130 | MS.gene28345 | 0.849071 | 4.09E-60 | -1.69E-46 |
MS.gene058157 | MS.gene28345 | 0.803269 | 3.78E-49 | -1.69E-46 |
MS.gene058269 | MS.gene28345 | -0.805207 | 1.49E-49 | -1.69E-46 |
MS.gene058323 | MS.gene28345 | 0.849156 | 3.87E-60 | -1.69E-46 |
MS.gene058334 | MS.gene28345 | -0.819784 | 9.68E-53 | -1.69E-46 |
MS.gene058338 | MS.gene28345 | 0.852457 | 4.56E-61 | -1.69E-46 |
MS.gene05837 | MS.gene28345 | 0.871003 | 9.51E-67 | -1.69E-46 |
MS.gene058419 | MS.gene28345 | 0.948736 | 5.21E-107 | -1.69E-46 |
MS.gene058544 | MS.gene28345 | 0.901228 | 3.31E-78 | -1.69E-46 |
MS.gene058719 | MS.gene28345 | 0.81914 | 1.36E-52 | -1.69E-46 |
MS.gene058723 | MS.gene28345 | 0.896579 | 3.22E-76 | -1.69E-46 |
MS.gene058773 | MS.gene28345 | 0.91115 | 8.42E-83 | -1.69E-46 |
MS.gene058838 | MS.gene28345 | 0.848016 | 8.02E-60 | -1.69E-46 |
MS.gene05883 | MS.gene28345 | 0.862149 | 6.22E-64 | -1.69E-46 |
MS.gene058840 | MS.gene28345 | -0.818756 | 1.66E-52 | -1.69E-46 |
MS.gene058978 | MS.gene28345 | -0.809044 | 2.30E-50 | -1.69E-46 |
MS.gene059022 | MS.gene28345 | 0.940605 | 1.75E-100 | -1.69E-46 |
MS.gene059023 | MS.gene28345 | 0.879219 | 1.49E-69 | -1.69E-46 |
MS.gene059029 | MS.gene28345 | 0.890479 | 9.49E-74 | -1.69E-46 |
MS.gene05912 | MS.gene28345 | 0.806957 | 6.39E-50 | -1.69E-46 |
MS.gene05913 | MS.gene28345 | 0.882313 | 1.16E-70 | -1.69E-46 |
MS.gene05934 | MS.gene28345 | 0.860844 | 1.56E-63 | -1.69E-46 |
MS.gene059367 | MS.gene28345 | 0.865947 | 4.08E-65 | -1.69E-46 |
MS.gene059368 | MS.gene28345 | 0.814136 | 1.80E-51 | -1.69E-46 |
MS.gene059536 | MS.gene28345 | 0.861332 | 1.11E-63 | -1.69E-46 |
MS.gene059667 | MS.gene28345 | 0.834147 | 3.55E-56 | -1.69E-46 |
MS.gene059677 | MS.gene28345 | 0.940977 | 9.24E-101 | -1.69E-46 |
MS.gene059711 | MS.gene28345 | 0.81634 | 5.82E-52 | -1.69E-46 |
MS.gene059718 | MS.gene28345 | 0.931399 | 4.00E-94 | -1.69E-46 |
MS.gene059756 | MS.gene28345 | 0.893159 | 8.15E-75 | -1.69E-46 |
MS.gene059801 | MS.gene28345 | 0.850657 | 1.47E-60 | -1.69E-46 |
MS.gene059837 | MS.gene28345 | 0.806947 | 6.42E-50 | -1.69E-46 |
MS.gene059858 | MS.gene28345 | 0.800746 | 1.25E-48 | -1.69E-46 |
MS.gene059865 | MS.gene28345 | 0.91276 | 1.35E-83 | -1.69E-46 |
MS.gene059902 | MS.gene28345 | 0.873663 | 1.24E-67 | -1.69E-46 |
MS.gene059960 | MS.gene28345 | 0.863878 | 1.82E-64 | -1.69E-46 |
MS.gene06000 | MS.gene28345 | 0.821868 | 3.21E-53 | -1.69E-46 |
MS.gene060193 | MS.gene28345 | 0.812248 | 4.66E-51 | -1.69E-46 |
MS.gene060337 | MS.gene28345 | -0.820859 | 5.49E-53 | -1.69E-46 |
MS.gene060341 | MS.gene28345 | 0.82831 | 9.66E-55 | -1.69E-46 |
MS.gene060356 | MS.gene28345 | 0.834487 | 2.91E-56 | -1.69E-46 |
MS.gene060482 | MS.gene28345 | 0.884378 | 2.02E-71 | -1.69E-46 |
MS.gene060595 | MS.gene28345 | -0.801177 | 1.02E-48 | -1.69E-46 |
MS.gene060703 | MS.gene28345 | 0.896589 | 3.19E-76 | -1.69E-46 |
MS.gene060727 | MS.gene28345 | 0.809687 | 1.67E-50 | -1.69E-46 |
MS.gene060728 | MS.gene28345 | 0.841725 | 3.99E-58 | -1.69E-46 |
MS.gene060762 | MS.gene28345 | 0.894032 | 3.61E-75 | -1.69E-46 |
MS.gene060778 | MS.gene28345 | 0.856156 | 3.89E-62 | -1.69E-46 |
MS.gene06077 | MS.gene28345 | 0.911046 | 9.47E-83 | -1.69E-46 |
MS.gene060804 | MS.gene28345 | 0.857808 | 1.27E-62 | -1.69E-46 |
MS.gene060818 | MS.gene28345 | 0.833513 | 5.11E-56 | -1.69E-46 |
MS.gene060835 | MS.gene28345 | 0.851687 | 7.55E-61 | -1.69E-46 |
MS.gene060837 | MS.gene28345 | 0.824152 | 9.43E-54 | -1.69E-46 |
MS.gene06092 | MS.gene28345 | 0.881126 | 3.11E-70 | -1.69E-46 |
MS.gene060982 | MS.gene28345 | 0.884088 | 2.59E-71 | -1.69E-46 |
MS.gene061041 | MS.gene28345 | 0.834464 | 2.95E-56 | -1.69E-46 |
MS.gene061134 | MS.gene28345 | 0.869795 | 2.37E-66 | -1.69E-46 |
MS.gene061150 | MS.gene28345 | 0.904301 | 1.42E-79 | -1.69E-46 |
MS.gene061171 | MS.gene28345 | 0.841544 | 4.46E-58 | -1.69E-46 |
MS.gene061200 | MS.gene28345 | 0.895189 | 1.21E-75 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28345.t1 | MTR_4g067150 | 98.106 | 264 | 5 | 0 | 1 | 264 | 1 | 264 | 0.0 | 530 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28345.t1 | AT3G59400 | 60.847 | 189 | 67 | 3 | 79 | 264 | 81 | 265 | 1.23e-75 | 231 |
Find 65 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTTATGTTGGTGGGGTTGA+TGG | 0.249835 | 4.2:-38669476 | None:intergenic |
GACCATAGTGACAACAAATT+TGG | 0.281402 | 4.2:+38669769 | MS.gene28345:CDS |
CCTTATTAAATAATTTCTTT+TGG | 0.281882 | 4.2:-38669801 | None:intergenic |
CCAAAAGAAATTATTTAATA+AGG | 0.285031 | 4.2:+38669801 | MS.gene28345:CDS |
TTGTCTCTTCATCGGCTTCT+CGG | 0.317241 | 4.2:-38669630 | None:intergenic |
GGTTGATGGTGGTTGGTTTG+AGG | 0.356236 | 4.2:-38669462 | None:intergenic |
ATCCAAATTTGTTGTCACTA+TGG | 0.367364 | 4.2:-38669771 | None:intergenic |
ATGGCGTGGAGGATGTTGTT+TGG | 0.369809 | 4.2:-38669546 | None:intergenic |
GACGAAGTTGAAGTTTCATT+TGG | 0.377430 | 4.2:+38670039 | MS.gene28345:CDS |
TTGGTGGGGTTGATGGTGGT+TGG | 0.383998 | 4.2:-38669469 | None:intergenic |
AGAAAATGTGATAGAGGAGT+TGG | 0.385483 | 4.2:-38669518 | None:intergenic |
TGGAAGAGGAAGAGTGAGAG+AGG | 0.386701 | 4.2:-38669498 | None:intergenic |
TTTGGTAACACTGAAGGAAA+TGG | 0.408657 | 4.2:+38670057 | MS.gene28345:CDS |
TGGCGTGGAGGATGTTGTTT+GGG | 0.430614 | 4.2:-38669545 | None:intergenic |
TTGAATTGAGTGAAGAGAAT+TGG | 0.431834 | 4.2:-38669365 | None:intergenic |
TATGTTGGTGGGGTTGATGG+TGG | 0.435437 | 4.2:-38669473 | None:intergenic |
TGAGAGAGGGTTATGTTGGT+GGG | 0.442343 | 4.2:-38669484 | None:intergenic |
AGAGTGAGAGAGGGTTATGT+TGG | 0.443722 | 4.2:-38669488 | None:intergenic |
GAAGAAGCTTGACACTGAAA+TGG | 0.447244 | 4.2:+38669867 | MS.gene28345:CDS |
CACTATGGTCCCTCCACAGC+TGG | 0.452202 | 4.2:-38669756 | None:intergenic |
TCTGAGCTGCTTCGCCTGCT+AGG | 0.457028 | 4.2:-38669669 | None:intergenic |
CTGGAGGAGTTCAAAGGAGC+TGG | 0.460854 | 4.2:-38669584 | None:intergenic |
GGAGATAGAAAATGTGATAG+AGG | 0.463312 | 4.2:-38669524 | None:intergenic |
CGTCTTCTCATCGTCCTAGC+AGG | 0.467340 | 4.2:+38669655 | MS.gene28345:CDS |
TGTGATAGAGGAGTTGGAAG+AGG | 0.470211 | 4.2:-38669512 | None:intergenic |
TCCTGGACTGCATCAAAAGC+TGG | 0.475555 | 4.2:-38670018 | None:intergenic |
CTTCACCAAGTTCTTCATCA+AGG | 0.483845 | 4.2:+38669834 | MS.gene28345:CDS |
GTGAGAGAGGGTTATGTTGG+TGG | 0.487193 | 4.2:-38669485 | None:intergenic |
ACCAAGTTCTTCATCAAGGT+TGG | 0.494609 | 4.2:+38669838 | MS.gene28345:CDS |
AAAAGATTCATCAAAACCAT+TGG | 0.496783 | 4.2:+38670095 | MS.gene28345:CDS |
AGTTCTTCATCAAGGTTGGT+TGG | 0.506590 | 4.2:+38669842 | MS.gene28345:CDS |
GGCGAAGCAGCTCAGAAGCG+TGG | 0.511684 | 4.2:+38669676 | MS.gene28345:CDS |
AAGACGTCTTGTCTCTTCAT+CGG | 0.512265 | 4.2:-38669638 | None:intergenic |
TTGAAGATCTTGGTAGCCAA+TGG | 0.513830 | 4.2:-38670111 | None:intergenic |
GTTTCATTTGGTAACACTGA+AGG | 0.518176 | 4.2:+38670051 | MS.gene28345:CDS |
GTCAGAGGTAAATGACCCTC+TGG | 0.526832 | 4.2:-38669949 | None:intergenic |
TTCAAAGGAGCTGGTTTGAG+AGG | 0.533319 | 4.2:-38669575 | None:intergenic |
CTGGTTTGAGAGGTTGATGA+TGG | 0.533734 | 4.2:-38669565 | None:intergenic |
ATGAAACTTCAACTTCGTCC+TGG | 0.535529 | 4.2:-38670035 | None:intergenic |
GAAGGAAATGGAGCACTCAA+AGG | 0.541600 | 4.2:+38670069 | MS.gene28345:CDS |
GAGAGAGGGTTATGTTGGTG+GGG | 0.544230 | 4.2:-38669483 | None:intergenic |
ACCAACCTTGATGAAGAACT+TGG | 0.545583 | 4.2:-38669839 | None:intergenic |
AAATGGAGCAATATAACTAC+AGG | 0.552072 | 4.2:+38669884 | MS.gene28345:CDS |
GGAAGAGGAAGAGTGAGAGA+GGG | 0.558791 | 4.2:-38669497 | None:intergenic |
AAGGAAATGGAGCACTCAAA+GGG | 0.561615 | 4.2:+38670070 | MS.gene28345:CDS |
AAACAATTGACCAGCTGTGG+AGG | 0.563830 | 4.2:+38669746 | MS.gene28345:CDS |
CAGTTTCAGAAGGGTAGTAG+TGG | 0.564931 | 4.2:-38669408 | None:intergenic |
AGTGAGGATGAAAGTGTGGA+TGG | 0.569347 | 4.2:-38669436 | None:intergenic |
TGGCTGAGAGATGCTGCTGG+AGG | 0.581059 | 4.2:-38669600 | None:intergenic |
TCAAAACAATTGACCAGCTG+TGG | 0.581708 | 4.2:+38669743 | MS.gene28345:CDS |
GATGGAGGAGCAGTTTCAGA+AGG | 0.592373 | 4.2:-38669418 | None:intergenic |
GAGGATGAAAGTGTGGATGG+AGG | 0.603905 | 4.2:-38669433 | None:intergenic |
TTGAGAGGTTGATGATGGCG+TGG | 0.604696 | 4.2:-38669560 | None:intergenic |
CCTCTGAGTGCATTTGTCAG+AGG | 0.605940 | 4.2:-38669964 | None:intergenic |
ATGCTGCTGGAGGAGTTCAA+AGG | 0.611446 | 4.2:-38669590 | None:intergenic |
AACAATTGACCAGCTGTGGA+GGG | 0.613807 | 4.2:+38669747 | MS.gene28345:CDS |
GGACTGCATCAAAAGCTGGA+TGG | 0.636421 | 4.2:-38670014 | None:intergenic |
GAAAAGTGAGGATGAAAGTG+TGG | 0.636789 | 4.2:-38669440 | None:intergenic |
CTCAATGATGACACTCCAGA+GGG | 0.646176 | 4.2:+38669934 | MS.gene28345:CDS |
ATGGAGGAGCAGTTTCAGAA+GGG | 0.648881 | 4.2:-38669417 | None:intergenic |
AGCTCCCATATAAACTCCGT+AGG | 0.660834 | 4.2:-38669913 | None:intergenic |
AGAGGTTGATGATGGCGTGG+AGG | 0.664388 | 4.2:-38669557 | None:intergenic |
GCTCAATGATGACACTCCAG+AGG | 0.675722 | 4.2:+38669933 | MS.gene28345:CDS |
GGTTGGTTTGAGGAAAAGTG+AGG | 0.680158 | 4.2:-38669452 | None:intergenic |
CCTCTGACAAATGCACTCAG+AGG | 0.721539 | 4.2:+38669964 | MS.gene28345:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CCAAAAGAAATTATTTAATA+AGG | + | chr4.2:38669801-38669820 | MS.gene28345:CDS | 15.0% |
!!! | CCTTATTAAATAATTTCTTT+TGG | - | chr4.2:38669804-38669823 | None:intergenic | 15.0% |
! | AAAAGATTCATCAAAACCAT+TGG | + | chr4.2:38670095-38670114 | MS.gene28345:CDS | 25.0% |
AAATGGAGCAATATAACTAC+AGG | + | chr4.2:38669884-38669903 | MS.gene28345:CDS | 30.0% | |
TTGAATTGAGTGAAGAGAAT+TGG | - | chr4.2:38669368-38669387 | None:intergenic | 30.0% | |
! | TTTTCCTACGGAGTTTATAT+GGG | + | chr4.2:38669909-38669928 | MS.gene28345:CDS | 30.0% |
!! | ATCCAAATTTGTTGTCACTA+TGG | - | chr4.2:38669774-38669793 | None:intergenic | 30.0% |
!!! | ATAGTCTGTTTTGAAGATCT+TGG | - | chr4.2:38670124-38670143 | None:intergenic | 30.0% |
AGAAAATGTGATAGAGGAGT+TGG | - | chr4.2:38669521-38669540 | None:intergenic | 35.0% | |
GACCATAGTGACAACAAATT+TGG | + | chr4.2:38669769-38669788 | MS.gene28345:CDS | 35.0% | |
GACGAAGTTGAAGTTTCATT+TGG | + | chr4.2:38670039-38670058 | MS.gene28345:CDS | 35.0% | |
GGAGATAGAAAATGTGATAG+AGG | - | chr4.2:38669527-38669546 | None:intergenic | 35.0% | |
! | CTTTTCCTACGGAGTTTATA+TGG | + | chr4.2:38669908-38669927 | MS.gene28345:CDS | 35.0% |
! | GTTTCATTTGGTAACACTGA+AGG | + | chr4.2:38670051-38670070 | MS.gene28345:CDS | 35.0% |
! | TAACTACAGGTCTTTTCCTA+CGG | + | chr4.2:38669897-38669916 | MS.gene28345:CDS | 35.0% |
! | TTTGGTAACACTGAAGGAAA+TGG | + | chr4.2:38670057-38670076 | MS.gene28345:CDS | 35.0% |
AAGACGTCTTGTCTCTTCAT+CGG | - | chr4.2:38669641-38669660 | None:intergenic | 40.0% | |
ACCAACCTTGATGAAGAACT+TGG | - | chr4.2:38669842-38669861 | None:intergenic | 40.0% | |
ACCAAGTTCTTCATCAAGGT+TGG | + | chr4.2:38669838-38669857 | MS.gene28345:CDS | 40.0% | |
ATGAAACTTCAACTTCGTCC+TGG | - | chr4.2:38670038-38670057 | None:intergenic | 40.0% | |
CTTCACCAAGTTCTTCATCA+AGG | + | chr4.2:38669834-38669853 | MS.gene28345:CDS | 40.0% | |
GAAAAGTGAGGATGAAAGTG+TGG | - | chr4.2:38669443-38669462 | None:intergenic | 40.0% | |
GAAGAAGCTTGACACTGAAA+TGG | + | chr4.2:38669867-38669886 | MS.gene28345:CDS | 40.0% | |
TCAAAACAATTGACCAGCTG+TGG | + | chr4.2:38669743-38669762 | MS.gene28345:CDS | 40.0% | |
! | AAGGAAATGGAGCACTCAAA+GGG | + | chr4.2:38670070-38670089 | MS.gene28345:CDS | 40.0% |
! | AGTTCTTCATCAAGGTTGGT+TGG | + | chr4.2:38669842-38669861 | MS.gene28345:CDS | 40.0% |
! | TGGCTATGTTTTCTTCTCAG+AGG | + | chr4.2:38669696-38669715 | MS.gene28345:CDS | 40.0% |
! | TTGAAGATCTTGGTAGCCAA+TGG | - | chr4.2:38670114-38670133 | None:intergenic | 40.0% |
!! | ACAGCTGGTCAATTGTTTTG+AGG | - | chr4.2:38669744-38669763 | None:intergenic | 40.0% |
AAACAATTGACCAGCTGTGG+AGG | + | chr4.2:38669746-38669765 | MS.gene28345:CDS | 45.0% | |
AACAATTGACCAGCTGTGGA+GGG | + | chr4.2:38669747-38669766 | MS.gene28345:CDS | 45.0% | |
AGAGTGAGAGAGGGTTATGT+TGG | - | chr4.2:38669491-38669510 | None:intergenic | 45.0% | |
AGCTCCCATATAAACTCCGT+AGG | - | chr4.2:38669916-38669935 | None:intergenic | 45.0% | |
ATGGAGGAGCAGTTTCAGAA+GGG | - | chr4.2:38669420-38669439 | None:intergenic | 45.0% | |
CAGTTTCAGAAGGGTAGTAG+TGG | - | chr4.2:38669411-38669430 | None:intergenic | 45.0% | |
CTCAATGATGACACTCCAGA+GGG | + | chr4.2:38669934-38669953 | MS.gene28345:CDS | 45.0% | |
TGAGAGAGGGTTATGTTGGT+GGG | - | chr4.2:38669487-38669506 | None:intergenic | 45.0% | |
TGTGATAGAGGAGTTGGAAG+AGG | - | chr4.2:38669515-38669534 | None:intergenic | 45.0% | |
! | AGTGAGGATGAAAGTGTGGA+TGG | - | chr4.2:38669439-38669458 | None:intergenic | 45.0% |
! | GAAGGAAATGGAGCACTCAA+AGG | + | chr4.2:38670069-38670088 | MS.gene28345:CDS | 45.0% |
!! | ATCGGCTTCTCGGAAGTTTT+TGG | - | chr4.2:38669623-38669642 | None:intergenic | 45.0% |
!! | CTGGTTTGAGAGGTTGATGA+TGG | - | chr4.2:38669568-38669587 | None:intergenic | 45.0% |
!! | GGTTGGTTTGAGGAAAAGTG+AGG | - | chr4.2:38669455-38669474 | None:intergenic | 45.0% |
!! | TTCAAAGGAGCTGGTTTGAG+AGG | - | chr4.2:38669578-38669597 | None:intergenic | 45.0% |
!! | TTGTCTCTTCATCGGCTTCT+CGG | - | chr4.2:38669633-38669652 | None:intergenic | 45.0% |
ATGCTGCTGGAGGAGTTCAA+AGG | - | chr4.2:38669593-38669612 | None:intergenic | 50.0% | |
ATGGCGTGGAGGATGTTGTT+TGG | - | chr4.2:38669549-38669568 | None:intergenic | 50.0% | |
CCTCTGACAAATGCACTCAG+AGG | + | chr4.2:38669964-38669983 | MS.gene28345:CDS | 50.0% | |
CCTCTGAGTGCATTTGTCAG+AGG | - | chr4.2:38669967-38669986 | None:intergenic | 50.0% | |
GAGAGAGGGTTATGTTGGTG+GGG | - | chr4.2:38669486-38669505 | None:intergenic | 50.0% | |
GATGGAGGAGCAGTTTCAGA+AGG | - | chr4.2:38669421-38669440 | None:intergenic | 50.0% | |
GCTCAATGATGACACTCCAG+AGG | + | chr4.2:38669933-38669952 | MS.gene28345:CDS | 50.0% | |
GGAAGAGGAAGAGTGAGAGA+GGG | - | chr4.2:38669500-38669519 | None:intergenic | 50.0% | |
GGACTGCATCAAAAGCTGGA+TGG | - | chr4.2:38670017-38670036 | None:intergenic | 50.0% | |
GTCAGAGGTAAATGACCCTC+TGG | - | chr4.2:38669952-38669971 | None:intergenic | 50.0% | |
GTGAGAGAGGGTTATGTTGG+TGG | - | chr4.2:38669488-38669507 | None:intergenic | 50.0% | |
TCCTGGACTGCATCAAAAGC+TGG | - | chr4.2:38670021-38670040 | None:intergenic | 50.0% | |
TGGAAGAGGAAGAGTGAGAG+AGG | - | chr4.2:38669501-38669520 | None:intergenic | 50.0% | |
! | GAGGATGAAAGTGTGGATGG+AGG | - | chr4.2:38669436-38669455 | None:intergenic | 50.0% |
! | GGTTATGTTGGTGGGGTTGA+TGG | - | chr4.2:38669479-38669498 | None:intergenic | 50.0% |
! | TCCAGCTTTTGATGCAGTCC+AGG | + | chr4.2:38670017-38670036 | MS.gene28345:CDS | 50.0% |
! | TGGCGTGGAGGATGTTGTTT+GGG | - | chr4.2:38669548-38669567 | None:intergenic | 50.0% |
!! | GGTTGATGGTGGTTGGTTTG+AGG | - | chr4.2:38669465-38669484 | None:intergenic | 50.0% |
!! | TATGTTGGTGGGGTTGATGG+TGG | - | chr4.2:38669476-38669495 | None:intergenic | 50.0% |
!! | TTGAGAGGTTGATGATGGCG+TGG | - | chr4.2:38669563-38669582 | None:intergenic | 50.0% |
!! | TTTTGGCTGAGAGATGCTGC+TGG | - | chr4.2:38669606-38669625 | None:intergenic | 50.0% |
CGTCTTCTCATCGTCCTAGC+AGG | + | chr4.2:38669655-38669674 | MS.gene28345:CDS | 55.0% | |
CTGGAGGAGTTCAAAGGAGC+TGG | - | chr4.2:38669587-38669606 | None:intergenic | 55.0% | |
!! | AGAGGTTGATGATGGCGTGG+AGG | - | chr4.2:38669560-38669579 | None:intergenic | 55.0% |
!! | TTGGTGGGGTTGATGGTGGT+TGG | - | chr4.2:38669472-38669491 | None:intergenic | 55.0% |
CACTATGGTCCCTCCACAGC+TGG | - | chr4.2:38669759-38669778 | None:intergenic | 60.0% | |
TCTGAGCTGCTTCGCCTGCT+AGG | - | chr4.2:38669672-38669691 | None:intergenic | 60.0% | |
TGGCTGAGAGATGCTGCTGG+AGG | - | chr4.2:38669603-38669622 | None:intergenic | 60.0% | |
GGCGAAGCAGCTCAGAAGCG+TGG | + | chr4.2:38669676-38669695 | MS.gene28345:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 38669358 | 38670152 | 38669358 | ID=MS.gene28345 |
chr4.2 | mRNA | 38669358 | 38670152 | 38669358 | ID=MS.gene28345.t1;Parent=MS.gene28345 |
chr4.2 | exon | 38669358 | 38670152 | 38669358 | ID=MS.gene28345.t1.exon1;Parent=MS.gene28345.t1 |
chr4.2 | CDS | 38669358 | 38670152 | 38669358 | ID=cds.MS.gene28345.t1;Parent=MS.gene28345.t1 |
Gene Sequence |
Protein sequence |