Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331240 | RHN77086.1 | 59.434 | 106 | 18 | 2 | 152 | 232 | 197 | 302 | 1.29e-24 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331240 | sp|Q9SMY8|FBL15_ARATH | 41.538 | 130 | 25 | 2 | 152 | 230 | 390 | 519 | 1.24e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331240 | A0A396JFQ5 | 59.434 | 106 | 18 | 2 | 152 | 232 | 197 | 302 | 6.17e-25 | 113 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020410 | Msa1331240 | 0.800028 | 1.746245e-48 | -8.615850e-47 |
| Msa0026910 | Msa1331240 | 0.807582 | 4.712056e-50 | -8.615850e-47 |
| Msa0031180 | Msa1331240 | 0.813197 | 2.891644e-51 | -8.615850e-47 |
| Msa0036140 | Msa1331240 | 0.827269 | 1.717475e-54 | -8.615850e-47 |
| Msa0042550 | Msa1331240 | 0.811781 | 5.895118e-51 | -8.615850e-47 |
| Msa0042920 | Msa1331240 | 0.824685 | 7.060932e-54 | -8.615850e-47 |
| Msa0043980 | Msa1331240 | 0.836125 | 1.124111e-56 | -8.615850e-47 |
| Msa0051740 | Msa1331240 | 0.800754 | 1.242664e-48 | -8.615850e-47 |
| Msa0068680 | Msa1331240 | 0.806856 | 6.712720e-50 | -8.615850e-47 |
| Msa0070170 | Msa1331240 | 0.809186 | 2.142571e-50 | -8.615850e-47 |
| Msa0072720 | Msa1331240 | 0.820586 | 6.344419e-53 | -8.615850e-47 |
| Msa0078480 | Msa1331240 | 0.800780 | 1.227128e-48 | -8.615850e-47 |
| Msa0084080 | Msa1331240 | 0.830675 | 2.568857e-55 | -8.615850e-47 |
| Msa0095560 | Msa1331240 | 0.809710 | 1.654075e-50 | -8.615850e-47 |
| Msa0100160 | Msa1331240 | 0.803255 | 3.803089e-49 | -8.615850e-47 |
| Msa0613710 | Msa1331240 | 0.803989 | 2.678922e-49 | -8.615850e-47 |
| Msa0624060 | Msa1331240 | 0.805920 | 1.057172e-49 | -8.615850e-47 |
| Msa0638350 | Msa1331240 | 0.805207 | 1.492208e-49 | -8.615850e-47 |
| Msa0641730 | Msa1331240 | 0.824713 | 6.952140e-54 | -8.615850e-47 |
| Msa0654310 | Msa1331240 | 0.804416 | 2.183125e-49 | -8.615850e-47 |
| Msa0667740 | Msa1331240 | 0.808446 | 3.084806e-50 | -8.615850e-47 |
| Msa0676130 | Msa1331240 | 0.800827 | 1.200401e-48 | -8.615850e-47 |
| Msa0676180 | Msa1331240 | 0.800360 | 1.494772e-48 | -8.615850e-47 |
| Msa0682680 | Msa1331240 | 0.802116 | 6.534092e-49 | -8.615850e-47 |
| Msa0688070 | Msa1331240 | 0.817655 | 2.945645e-52 | -8.615850e-47 |
| Msa0689780 | Msa1331240 | 0.801212 | 1.001816e-48 | -8.615850e-47 |
| Msa0693380 | Msa1331240 | 0.811831 | 5.750332e-51 | -8.615850e-47 |
| Msa0703780 | Msa1331240 | 0.828470 | 8.832350e-55 | -8.615850e-47 |
| Msa0709160 | Msa1331240 | 0.832402 | 9.648635e-56 | -8.615850e-47 |
| Msa0711100 | Msa1331240 | 0.804761 | 1.849534e-49 | -8.615850e-47 |
| Msa0711790 | Msa1331240 | 0.804596 | 2.002212e-49 | -8.615850e-47 |
| Msa0715410 | Msa1331240 | 0.812689 | 3.735763e-51 | -8.615850e-47 |
| Msa0716960 | Msa1331240 | 0.801316 | 9.538294e-49 | -8.615850e-47 |
| Msa0717010 | Msa1331240 | 0.803155 | 3.990077e-49 | -8.615850e-47 |
| Msa0721280 | Msa1331240 | 0.828242 | 1.002259e-54 | -8.615850e-47 |
| Msa0732600 | Msa1331240 | 0.803724 | 3.040413e-49 | -8.615850e-47 |
| Msa0740510 | Msa1331240 | 0.809750 | 1.621620e-50 | -8.615850e-47 |
| Msa0749440 | Msa1331240 | 0.810786 | 9.693205e-51 | -8.615850e-47 |
| Msa0750850 | Msa1331240 | 0.809136 | 2.196791e-50 | -8.615850e-47 |
| Msa0751850 | Msa1331240 | 0.828629 | 8.084695e-55 | -8.615850e-47 |
| Msa0763890 | Msa1331240 | 0.821166 | 4.663865e-53 | -8.615850e-47 |
| Msa0763920 | Msa1331240 | 0.820367 | 7.119692e-53 | -8.615850e-47 |
| Msa0773590 | Msa1331240 | 0.811081 | 8.366014e-51 | -8.615850e-47 |
| Msa0784480 | Msa1331240 | 0.818582 | 1.818515e-52 | -8.615850e-47 |
| Msa0797770 | Msa1331240 | 0.835168 | 1.963663e-56 | -8.615850e-47 |
| Msa0811040 | Msa1331240 | 0.810626 | 1.049815e-50 | -8.615850e-47 |
| Msa0817460 | Msa1331240 | 0.810534 | 1.098828e-50 | -8.615850e-47 |
| Msa0818060 | Msa1331240 | 0.810153 | 1.328173e-50 | -8.615850e-47 |
| Msa0820770 | Msa1331240 | 0.814953 | 1.184844e-51 | -8.615850e-47 |
| Msa0820850 | Msa1331240 | 0.803349 | 3.636583e-49 | -8.615850e-47 |
| Msa0831850 | Msa1331240 | 0.835393 | 1.722998e-56 | -8.615850e-47 |
| Msa0832090 | Msa1331240 | 0.808029 | 3.786154e-50 | -8.615850e-47 |
| Msa0832150 | Msa1331240 | 0.835483 | 1.634249e-56 | -8.615850e-47 |
| Msa0832340 | Msa1331240 | 0.834550 | 2.809395e-56 | -8.615850e-47 |
| Msa0835230 | Msa1331240 | 0.837600 | 4.724458e-57 | -8.615850e-47 |
| Msa0131770 | Msa1331240 | 0.817500 | 3.193337e-52 | -8.615850e-47 |
| Msa0138020 | Msa1331240 | 0.829484 | 5.016237e-55 | -8.615850e-47 |
| Msa0168430 | Msa1331240 | 0.800278 | 1.553332e-48 | -8.615850e-47 |
| Msa0178510 | Msa1331240 | 0.829589 | 4.729952e-55 | -8.615850e-47 |
| Msa0178930 | Msa1331240 | 0.806156 | 9.433028e-50 | -8.615850e-47 |
| Msa0186950 | Msa1331240 | 0.805005 | 1.644835e-49 | -8.615850e-47 |
| Msa0190530 | Msa1331240 | 0.805481 | 1.307375e-49 | -8.615850e-47 |
| Msa0205010 | Msa1331240 | 0.800572 | 1.353584e-48 | -8.615850e-47 |
| Msa0206010 | Msa1331240 | 0.815351 | 9.668136e-52 | -8.615850e-47 |
| Msa0218370 | Msa1331240 | 0.810609 | 1.058457e-50 | -8.615850e-47 |
| Msa0218810 | Msa1331240 | 0.804127 | 2.507223e-49 | -8.615850e-47 |
| Msa0223120 | Msa1331240 | 0.814943 | 1.190975e-51 | -8.615850e-47 |
| Msa1243870 | Msa1331240 | 0.812040 | 5.177339e-51 | -8.615850e-47 |
| Msa1250530 | Msa1331240 | 0.811985 | 5.321885e-51 | -8.615850e-47 |
| Msa1270660 | Msa1331240 | 0.829365 | 5.363505e-55 | -8.615850e-47 |
| Msa1270730 | Msa1331240 | 0.839134 | 1.899618e-57 | -8.615850e-47 |
| Msa1276440 | Msa1331240 | 0.805191 | 1.504136e-49 | -8.615850e-47 |
| Msa1277690 | Msa1331240 | 0.800170 | 1.634019e-48 | -8.615850e-47 |
| Msa1284900 | Msa1331240 | 0.806570 | 7.713464e-50 | -8.615850e-47 |
| Msa1287220 | Msa1331240 | 0.800644 | 1.308291e-48 | -8.615850e-47 |
| Msa1295330 | Msa1331240 | 0.802031 | 6.804562e-49 | -8.615850e-47 |
| Msa1297290 | Msa1331240 | 0.809454 | 1.877038e-50 | -8.615850e-47 |
| Msa1305340 | Msa1331240 | 0.804290 | 2.319585e-49 | -8.615850e-47 |
| Msa1306840 | Msa1331240 | 0.817571 | 3.078503e-52 | -8.615850e-47 |
| Msa1306850 | Msa1331240 | 0.812932 | 3.305019e-51 | -8.615850e-47 |
| Msa1325860 | Msa1331240 | -0.802148 | 6.435427e-49 | -8.615850e-47 |
| Msa1328710 | Msa1331240 | 0.806722 | 7.164453e-50 | -8.615850e-47 |
| Msa1330170 | Msa1331240 | 0.811934 | 5.459841e-51 | -8.615850e-47 |
| Msa1330180 | Msa1331240 | 0.824992 | 5.976921e-54 | -8.615850e-47 |
| Msa1331000 | Msa1331240 | 0.830506 | 2.827167e-55 | -8.615850e-47 |
| Msa1331240 | Msa1331320 | 0.839941 | 1.172362e-57 | -8.615850e-47 |
| Msa1331240 | Msa1332050 | 0.810737 | 9.934029e-51 | -8.615850e-47 |
| Msa1331240 | Msa1333730 | 0.808436 | 3.100707e-50 | -8.615850e-47 |
| Msa1331240 | Msa1335230 | 0.814260 | 1.686363e-51 | -8.615850e-47 |
| Msa1331240 | Msa1341490 | 0.803641 | 3.164031e-49 | -8.615850e-47 |
| Msa1331240 | Msa1353470 | 0.814365 | 1.598695e-51 | -8.615850e-47 |
| Msa1331240 | Msa1357890 | 0.825755 | 3.942238e-54 | -8.615850e-47 |
| Msa1331240 | Msa1368430 | 0.803958 | 2.719222e-49 | -8.615850e-47 |
| Msa1331240 | Msa1371940 | 0.805389 | 1.366769e-49 | -8.615850e-47 |
| Msa1331240 | Msa1372150 | 0.832331 | 1.004581e-55 | -8.615850e-47 |
| Msa1331240 | Msa1373030 | 0.820947 | 5.239975e-53 | -8.615850e-47 |
| Msa1331240 | Msa1376130 | 0.806400 | 8.380269e-50 | -8.615850e-47 |
| Msa1331240 | Msa1377570 | 0.804626 | 1.973575e-49 | -8.615850e-47 |
| Msa1331240 | Msa1378410 | 0.806339 | 8.628889e-50 | -8.615850e-47 |
| Msa1331240 | Msa1380900 | 0.805585 | 1.243689e-49 | -8.615850e-47 |
| Msa1331240 | Msa1382790 | 0.801711 | 7.915983e-49 | -8.615850e-47 |
| Msa1331240 | Msa1385000 | 0.809326 | 2.000067e-50 | -8.615850e-47 |
| Msa1331240 | Msa1389880 | 0.803447 | 3.471757e-49 | -8.615850e-47 |
| Msa1331240 | Msa1390680 | 0.823003 | 1.750309e-53 | -8.615850e-47 |
| Msa1331240 | Msa1390690 | 0.812258 | 4.642141e-51 | -8.615850e-47 |
| Msa1331240 | Msa1390700 | 0.835899 | 1.282827e-56 | -8.615850e-47 |
| Msa1331240 | Msa1392260 | 0.804436 | 2.162189e-49 | -8.615850e-47 |
| Msa1331240 | Msa1392890 | 0.824271 | 8.837596e-54 | -8.615850e-47 |
| Msa1331240 | Msa1392900 | 0.806795 | 6.916783e-50 | -8.615850e-47 |
| Msa1331240 | Msa1392910 | 0.832572 | 8.758872e-56 | -8.615850e-47 |
| Msa1331240 | Msa1397120 | 0.823121 | 1.642357e-53 | -8.615850e-47 |
| Msa1331240 | Msa1398090 | 0.829665 | 4.532297e-55 | -8.615850e-47 |
| Msa1331240 | Msa1403890 | 0.820993 | 5.113452e-53 | -8.615850e-47 |
| Msa1331240 | Msa1407190 | 0.805304 | 1.424271e-49 | -8.615850e-47 |
| Msa1331240 | Msa1407600 | 0.812645 | 3.820846e-51 | -8.615850e-47 |
| Msa1331240 | Msa1420820 | 0.829979 | 3.801820e-55 | -8.615850e-47 |
| Msa1331240 | Msa1426570 | 0.807619 | 4.626505e-50 | -8.615850e-47 |
| Msa1331240 | Msa1432130 | 0.803273 | 3.771672e-49 | -8.615850e-47 |
| Msa1331240 | Msa1435270 | 0.823993 | 1.026567e-53 | -8.615850e-47 |
| Msa1331240 | Msa1443850 | 0.809813 | 1.571780e-50 | -8.615850e-47 |
| Msa1331240 | Msa1460050 | 0.808540 | 2.945628e-50 | -8.615850e-47 |
| Msa1331240 | Msa1462290 | 0.812225 | 4.718667e-51 | -8.615850e-47 |
| Msa1331240 | Msa1465570 | 0.818685 | 1.722665e-52 | -8.615850e-47 |
| Msa1331240 | Msa1466540 | 0.830114 | 3.523520e-55 | -8.615850e-47 |
| Msa0367870 | Msa1331240 | 0.816558 | 5.199050e-52 | -8.615850e-47 |
| Msa0371600 | Msa1331240 | 0.888886 | 3.966475e-73 | -8.615850e-47 |
| Msa0373450 | Msa1331240 | 0.804370 | 2.231322e-49 | -8.615850e-47 |
| Msa0376910 | Msa1331240 | 0.816830 | 4.517894e-52 | -8.615850e-47 |
| Msa0381610 | Msa1331240 | -0.801442 | 8.988138e-49 | -8.615850e-47 |
| Msa0382370 | Msa1331240 | 0.806319 | 8.713370e-50 | -8.615850e-47 |
| Msa0412840 | Msa1331240 | 0.818503 | 1.894967e-52 | -8.615850e-47 |
| Msa0426900 | Msa1331240 | 0.817623 | 2.995509e-52 | -8.615850e-47 |
| Msa0432160 | Msa1331240 | 0.822227 | 2.652185e-53 | -8.615850e-47 |
| Msa0433410 | Msa1331240 | -0.800815 | 1.207218e-48 | -8.615850e-47 |
| Msa0440750 | Msa1331240 | 0.803357 | 3.623525e-49 | -8.615850e-47 |
| Msa0453000 | Msa1331240 | 0.808570 | 2.902839e-50 | -8.615850e-47 |
| Msa0455760 | Msa1331240 | 0.816918 | 4.316502e-52 | -8.615850e-47 |
| Msa0460590 | Msa1331240 | 0.801577 | 8.430739e-49 | -8.615850e-47 |
| Msa0464100 | Msa1331240 | 0.809280 | 2.045523e-50 | -8.615850e-47 |
| Msa0464120 | Msa1331240 | 0.802539 | 5.346683e-49 | -8.615850e-47 |
| Msa0468320 | Msa1331240 | 0.801345 | 9.406102e-49 | -8.615850e-47 |
| Msa0471900 | Msa1331240 | 0.822950 | 1.800791e-53 | -8.615850e-47 |
| Msa0476680 | Msa1331240 | 0.825374 | 4.855130e-54 | -8.615850e-47 |
| Msa0986510 | Msa1331240 | 0.816438 | 5.530453e-52 | -8.615850e-47 |
| Msa1032800 | Msa1331240 | 0.802389 | 5.741964e-49 | -8.615850e-47 |
| Msa1034150 | Msa1331240 | 0.801573 | 8.448586e-49 | -8.615850e-47 |
| Msa1034500 | Msa1331240 | 0.805224 | 1.479742e-49 | -8.615850e-47 |
| Msa1036610 | Msa1331240 | 0.809444 | 1.886169e-50 | -8.615850e-47 |
| Msa1039710 | Msa1331240 | -0.810956 | 8.905758e-51 | -8.615850e-47 |
| Msa1054990 | Msa1331240 | 0.802525 | 5.384185e-49 | -8.615850e-47 |
| Msa1063420 | Msa1331240 | 0.831665 | 1.467955e-55 | -8.615850e-47 |
| Msa1080270 | Msa1331240 | 0.816297 | 5.947040e-52 | -8.615850e-47 |
| Msa1082500 | Msa1331240 | 0.810096 | 1.366068e-50 | -8.615850e-47 |
| Msa1089460 | Msa1331240 | 0.800912 | 1.153817e-48 | -8.615850e-47 |
| Msa0241140 | Msa1331240 | 0.805473 | 1.312249e-49 | -8.615850e-47 |
| Msa0259210 | Msa1331240 | 0.832165 | 1.104719e-55 | -8.615850e-47 |
| Msa0259220 | Msa1331240 | 0.803559 | 3.290686e-49 | -8.615850e-47 |
| Msa0259230 | Msa1331240 | 0.809395 | 1.933079e-50 | -8.615850e-47 |
| Msa0265150 | Msa1331240 | 0.800276 | 1.555041e-48 | -8.615850e-47 |
| Msa0287410 | Msa1331240 | 0.809363 | 1.963136e-50 | -8.615850e-47 |
| Msa0303150 | Msa1331240 | 0.802206 | 6.261571e-49 | -8.615850e-47 |
| Msa0319170 | Msa1331240 | 0.825542 | 4.429046e-54 | -8.615850e-47 |
| Msa0326110 | Msa1331240 | 0.814816 | 1.270313e-51 | -8.615850e-47 |
| Msa0336300 | Msa1331240 | 0.821404 | 4.112238e-53 | -8.615850e-47 |
| Msa0336310 | Msa1331240 | 0.831412 | 1.694168e-55 | -8.615850e-47 |
| Msa0336320 | Msa1331240 | 0.841066 | 5.951475e-58 | -8.615850e-47 |
| Msa0339740 | Msa1331240 | 0.800808 | 1.211563e-48 | -8.615850e-47 |
| Msa0339910 | Msa1331240 | 0.824047 | 9.972956e-54 | -8.615850e-47 |
| Msa0363790 | Msa1331240 | 0.830969 | 2.177087e-55 | -8.615850e-47 |
| Msa1111870 | Msa1331240 | 0.802266 | 6.087034e-49 | -8.615850e-47 |
| Msa1121490 | Msa1331240 | 0.805333 | 1.404471e-49 | -8.615850e-47 |
| Msa1123470 | Msa1331240 | 0.803962 | 2.714039e-49 | -8.615850e-47 |
| Msa1129550 | Msa1331240 | 0.802985 | 4.325823e-49 | -8.615850e-47 |
| Msa1130530 | Msa1331240 | 0.804760 | 1.850597e-49 | -8.615850e-47 |
| Msa1131220 | Msa1331240 | 0.806766 | 7.015217e-50 | -8.615850e-47 |
| Msa1142670 | Msa1331240 | 0.805929 | 1.052829e-49 | -8.615850e-47 |
| Msa1163540 | Msa1331240 | 0.801747 | 7.782043e-49 | -8.615850e-47 |
| Msa1199570 | Msa1331240 | 0.805764 | 1.140397e-49 | -8.615850e-47 |
| Msa1204530 | Msa1331240 | 0.832345 | 9.969763e-56 | -8.615850e-47 |
| Msa1204630 | Msa1331240 | 0.818971 | 1.483349e-52 | -8.615850e-47 |
| Msa1207310 | Msa1331240 | 0.823595 | 1.273064e-53 | -8.615850e-47 |
| Msa1224480 | Msa1331240 | 0.816605 | 5.074372e-52 | -8.615850e-47 |
| Msa0484780 | Msa1331240 | 0.825539 | 4.435444e-54 | -8.615850e-47 |
| Msa0485490 | Msa1331240 | 0.800349 | 1.502295e-48 | -8.615850e-47 |
| Msa0495330 | Msa1331240 | 0.807614 | 4.637604e-50 | -8.615850e-47 |
| Msa0512900 | Msa1331240 | 0.808715 | 2.702777e-50 | -8.615850e-47 |
| Msa0518380 | Msa1331240 | 0.834129 | 3.582946e-56 | -8.615850e-47 |
| Msa0518440 | Msa1331240 | 0.805149 | 1.534186e-49 | -8.615850e-47 |
| Msa0521010 | Msa1331240 | 0.821536 | 3.832677e-53 | -8.615850e-47 |
| Msa0547160 | Msa1331240 | 0.812756 | 3.611402e-51 | -8.615850e-47 |
| Msa0577500 | Msa1331240 | 0.815172 | 1.059374e-51 | -8.615850e-47 |
| Msa0581050 | Msa1331240 | 0.813421 | 2.581295e-51 | -8.615850e-47 |
| Msa0587190 | Msa1331240 | 0.800332 | 1.514626e-48 | -8.615850e-47 |
| Msa0844110 | Msa1331240 | 0.801379 | 9.258844e-49 | -8.615850e-47 |
| Msa0844320 | Msa1331240 | 0.801862 | 7.370726e-49 | -8.615850e-47 |
| Msa0844420 | Msa1331240 | 0.805294 | 1.430867e-49 | -8.615850e-47 |
| Msa0844490 | Msa1331240 | 0.831056 | 2.072172e-55 | -8.615850e-47 |
| Msa0861090 | Msa1331240 | 0.815538 | 8.783610e-52 | -8.615850e-47 |
| Msa0861130 | Msa1331240 | 0.802644 | 5.088614e-49 | -8.615850e-47 |
| Msa0873860 | Msa1331240 | 0.806974 | 6.338549e-50 | -8.615850e-47 |
| Msa0894710 | Msa1331240 | 0.808399 | 3.157470e-50 | -8.615850e-47 |
| Msa0902830 | Msa1331240 | 0.802016 | 6.852151e-49 | -8.615850e-47 |
| Msa0924310 | Msa1331240 | 0.812530 | 4.047273e-51 | -8.615850e-47 |
| Msa0927380 | Msa1331240 | 0.808086 | 3.680773e-50 | -8.615850e-47 |
| Msa0930860 | Msa1331240 | 0.805756 | 1.144836e-49 | -8.615850e-47 |
| Msa0933100 | Msa1331240 | 0.808301 | 3.311992e-50 | -8.615850e-47 |
| Msa0936300 | Msa1331240 | 0.801410 | 9.122829e-49 | -8.615850e-47 |
| Msa0947660 | Msa1331240 | 0.800153 | 1.647239e-48 | -8.615850e-47 |
| Msa0962840 | Msa1331240 | 0.820918 | 5.320034e-53 | -8.615850e-47 |
| Msa0964900 | Msa1331240 | 0.808404 | 3.149960e-50 | -8.615850e-47 |
| Msa0969450 | Msa1331240 | 0.811573 | 6.544296e-51 | -8.615850e-47 |
| Msa0969520 | Msa1331240 | 0.850115 | 2.092236e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331240 | MtrunA17_Chr1g0150991 | 59.434 | 106 | 18 | 2 | 152 | 232 | 197 | 302 | 1.19e-28 | 113 |
| Msa1331240 | MtrunA17_Chr1g0150971 | 49.242 | 132 | 16 | 2 | 152 | 232 | 381 | 512 | 1.72e-25 | 104 |
| Msa1331240 | MtrunA17_Chr3g0126111 | 89.583 | 48 | 5 | 0 | 107 | 154 | 483 | 530 | 8.39e-24 | 99.4 |
| Msa1331240 | MtrunA17_Chr5g0434401 | 89.474 | 38 | 4 | 0 | 51 | 88 | 253 | 290 | 1.28e-15 | 75.5 |
| Msa1331240 | MtrunA17_Chr3g0120661 | 51.923 | 52 | 25 | 0 | 98 | 149 | 482 | 533 | 6.51e-12 | 64.7 |
| Msa1331240 | MtrunA17_Chr4g0072811 | 50.000 | 52 | 26 | 0 | 98 | 149 | 56 | 107 | 7.12e-12 | 62.4 |
| Msa1331240 | MtrunA17_Chr2g0291461 | 58.140 | 43 | 18 | 0 | 107 | 149 | 489 | 531 | 7.28e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331240 | AT4G33210.1 | 41.538 | 130 | 25 | 2 | 152 | 230 | 390 | 519 | 1.26e-15 | 76.3 |
| Msa1331240 | AT5G37530.1 | 71.053 | 38 | 11 | 0 | 53 | 90 | 253 | 290 | 2.35e-11 | 63.5 |
| Msa1331240 | AT5G37530.2 | 71.053 | 38 | 11 | 0 | 53 | 90 | 252 | 289 | 2.68e-11 | 63.2 |
| Msa1331240 | AT5G49720.1 | 60.465 | 43 | 17 | 0 | 107 | 149 | 486 | 528 | 6.67e-11 | 62.0 |
| Msa1331240 | AT1G65610.1 | 54.348 | 46 | 21 | 0 | 107 | 152 | 490 | 535 | 7.82e-11 | 62.0 |
Find 49 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTTAAACTGCTTCCATTTA+AGG | 0.088576 | 8_4:+50701774 | Msa1331240:CDS |
| TCTCCACTTGGACCCTTAAA+TGG | 0.191266 | 8_4:-50701787 | None:intergenic |
| AATGGAAGCAGTTTAACTTT+AGG | 0.275163 | 8_4:-50701769 | None:intergenic |
| GTTAAACTGCTTCCATTTAA+GGG | 0.303011 | 8_4:+50701775 | Msa1331240:CDS |
| AGCAATCTAAAACGAATTTC+AGG | 0.326894 | 8_4:+50701535 | Msa1331240:CDS |
| GAGAGTAGAAATCAGAATAA+AGG | 0.353001 | 8_4:+50701562 | Msa1331240:CDS |
| GTTTCAGGTTAACTATATCT+TGG | 0.365347 | 8_4:+50703298 | Msa1331240:intron |
| GGAAAACCCTTCAGACTATC+AGG | 0.373502 | 8_4:+50701813 | Msa1331240:CDS |
| GCATCAAGAAAACCAAGATT+AGG | 0.389817 | 8_4:-50703708 | None:intergenic |
| GCGCATCATTGCCCTAATCT+TGG | 0.396131 | 8_4:+50703696 | Msa1331240:CDS |
| ATACTGCCCAAGCATATCTT+TGG | 0.400258 | 8_4:+50703734 | Msa1331240:CDS |
| AATGAAAATGAGTTATTTAG+TGG | 0.404423 | 8_4:+50703331 | Msa1331240:CDS |
| TTTCAGGTTAACTATATCTT+GGG | 0.404930 | 8_4:+50703299 | Msa1331240:intron |
| CATCAAGAAAACCAAGATTA+GGG | 0.410489 | 8_4:-50703707 | None:intergenic |
| CGTCGATCCCTTGGGATAAA+CGG | 0.412629 | 8_4:+50703396 | Msa1331240:CDS |
| TGCAACTTCATGCCCTCAAC+TGG | 0.430503 | 8_4:+50703617 | Msa1331240:CDS |
| ATGCCCTCAACTGGTGAAGC+TGG | 0.450963 | 8_4:+50703626 | Msa1331240:CDS |
| CGGTACTACAATTGTGATGA+TGG | 0.451797 | 8_4:+50703416 | Msa1331240:CDS |
| ATAGAAGTGCGTCGATCCCT+TGG | 0.463260 | 8_4:+50703387 | Msa1331240:CDS |
| GAATCCACATTCTCATCTGC+TGG | 0.465970 | 8_4:-50701459 | None:intergenic |
| AGAATAGAAGATGAGGGTAA+AGG | 0.481708 | 8_4:+50702425 | Msa1331240:CDS |
| CACAACTCCAAAGATATGCT+TGG | 0.485915 | 8_4:-50703741 | None:intergenic |
| CTTCTATGATGAACTTGGAC+TGG | 0.507668 | 8_4:-50703371 | None:intergenic |
| ACGCACTTCTATGATGAACT+TGG | 0.517227 | 8_4:-50703376 | None:intergenic |
| ATAGAAGATGAGGGTAAAGG+AGG | 0.518477 | 8_4:+50702428 | Msa1331240:CDS |
| ACAACTCCAAAGATATGCTT+GGG | 0.519266 | 8_4:-50703740 | None:intergenic |
| ATGTCCAGCTTCACCAGTTG+AGG | 0.523654 | 8_4:-50703630 | None:intergenic |
| TAGAAGTGCGTCGATCCCTT+GGG | 0.523700 | 8_4:+50703388 | Msa1331240:CDS |
| GGTGGAGATCGTGGCATTGA+TGG | 0.528712 | 8_4:+50701715 | Msa1331240:CDS |
| CAAGTGTCTAACTGCTCCAC+CGG | 0.534792 | 8_4:+50704327 | Msa1331240:CDS |
| TTTACAGAGAATAGAAGATG+AGG | 0.553938 | 8_4:+50702418 | Msa1331240:intron |
| TTGTAGTACCGTTTATCCCA+AGG | 0.555321 | 8_4:-50703404 | None:intergenic |
| AAAATCACCTGATAGTCTGA+AGG | 0.567444 | 8_4:-50701820 | None:intergenic |
| TAAGGGTCCAAGTGGAGAAG+AGG | 0.568996 | 8_4:+50701792 | Msa1331240:CDS |
| TTACAGAGAATAGAAGATGA+GGG | 0.574958 | 8_4:+50702419 | Msa1331240:intron |
| ATGAAAATGAGTTATTTAGT+GGG | 0.579900 | 8_4:+50703332 | Msa1331240:CDS |
| TTGAAGTGATATTGATCCGG+TGG | 0.584608 | 8_4:-50704343 | None:intergenic |
| AATTTGAAGTGATATTGATC+CGG | 0.587951 | 8_4:-50704346 | None:intergenic |
| GCTTTAGACGGTGGAGATCG+TGG | 0.589470 | 8_4:+50701706 | Msa1331240:intron |
| AAATCACCTGATAGTCTGAA+GGG | 0.590641 | 8_4:-50701819 | None:intergenic |
| TGTAGTACCGTTTATCCCAA+GGG | 0.591780 | 8_4:-50703403 | None:intergenic |
| TGTCCAGCTTCACCAGTTGA+GGG | 0.593662 | 8_4:-50703629 | None:intergenic |
| GAATGTGTGGATGCAGCAGA+TGG | 0.613326 | 8_4:+50701432 | None:intergenic |
| GATGTTACAGACTTGTAGTG+CGG | 0.630132 | 8_4:-50702453 | None:intergenic |
| CTTCCATTTAAGGGTCCAAG+TGG | 0.631821 | 8_4:+50701784 | Msa1331240:CDS |
| AATGATGCGCTATTTCACGC+AGG | 0.633998 | 8_4:-50703683 | None:intergenic |
| ATGATGCGCTATTTCACGCA+GGG | 0.640718 | 8_4:-50703682 | None:intergenic |
| AAAACCAGCAGATGAGAATG+TGG | 0.652461 | 8_4:+50701455 | Msa1331240:CDS |
| TTTCTAAAGAAAACACAACA+GGG | 0.688114 | 8_4:-50701744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATGTTAAACATAATTGT+AGG | + | chr8_4:50701965-50701984 | Msa1331240:intron | 15.0% |
| !! | AATAAAAAAAGTAGAAAAAC+TGG | + | chr8_4:50702174-50702193 | Msa1331240:intron | 15.0% |
| !! | CAATAAAAAATCAGAAAATT+TGG | + | chr8_4:50702225-50702244 | Msa1331240:intron | 15.0% |
| !! | ATTTCATGATTAATCAATAA+AGG | - | chr8_4:50702675-50702694 | None:intergenic | 15.0% |
| !! | GAATAAAGGTAAAATATTCA+TGG | + | chr8_4:50701576-50701595 | Msa1331240:intron | 20.0% |
| !!! | TATTGATTTTTAGAGTTGAT+TGG | + | chr8_4:50701672-50701691 | Msa1331240:intron | 20.0% |
| !!! | TCAACTTTATTTGACATTTA+TGG | + | chr8_4:50702496-50702515 | Msa1331240:intron | 20.0% |
| !!! | CAACTTTATTTGACATTTAT+GGG | + | chr8_4:50702497-50702516 | Msa1331240:intron | 20.0% |
| !! | GTAAAAAAGTAAACAACATA+GGG | + | chr8_4:50702566-50702585 | Msa1331240:intron | 20.0% |
| !! | TCATTTAAGCAAAATTGAAA+AGG | - | chr8_4:50702621-50702640 | None:intergenic | 20.0% |
| !! | AACAAAAATAGCAAAAAGAT+AGG | + | chr8_4:50702701-50702720 | Msa1331240:intron | 20.0% |
| !! | ACAAAAATAGCAAAAAGATA+GGG | + | chr8_4:50702702-50702721 | Msa1331240:intron | 20.0% |
| !!! | ACAATCATAGTTTTAAAACT+CGG | - | chr8_4:50703027-50703046 | None:intergenic | 20.0% |
| !!! | AGTTTTAAAACTATGATTGT+AGG | + | chr8_4:50703027-50703046 | Msa1331240:intron | 20.0% |
| !!! | ACTAAATAACTCATTTTCAT+TGG | - | chr8_4:50703332-50703351 | None:intergenic | 20.0% |
| !! | AATGAAAATGAGTTATTTAG+TGG | + | chr8_4:50703331-50703350 | Msa1331240:CDS | 20.0% |
| !! | ATGAAAATGAGTTATTTAGT+GGG | + | chr8_4:50703332-50703351 | Msa1331240:CDS | 20.0% |
| !!! | GTATTTTGAACTAAAGTATA+TGG | + | chr8_4:50703802-50703821 | Msa1331240:intron | 20.0% |
| !! | TGTCATTAATATCAATATCT+GGG | - | chr8_4:50703973-50703992 | None:intergenic | 20.0% |
| !! | ATGTCATTAATATCAATATC+TGG | - | chr8_4:50703974-50703993 | None:intergenic | 20.0% |
| !! | TTTCTAAAGAAAACACAACA+GGG | - | chr8_4:50701747-50701766 | None:intergenic | 25.0% |
| !!! | TTTTCTAAAGAAAACACAAC+AGG | - | chr8_4:50701748-50701767 | None:intergenic | 25.0% |
| !!! | TTCTACTTTTTTTATTGACC+CGG | - | chr8_4:50702170-50702189 | None:intergenic | 25.0% |
| !! | TTTTTACGAGAAAAGAGAAA+GGG | - | chr8_4:50702553-50702572 | None:intergenic | 25.0% |
| !!! | TTTTTTACGAGAAAAGAGAA+AGG | - | chr8_4:50702554-50702573 | None:intergenic | 25.0% |
| ! | CGTAAAAAAGTAAACAACAT+AGG | + | chr8_4:50702565-50702584 | Msa1331240:intron | 25.0% |
| ! | TTATTCACGATAACATAAGT+AGG | - | chr8_4:50702737-50702756 | None:intergenic | 25.0% |
| !! | TTTAAAACTATGATTGTAGG+TGG | + | chr8_4:50703030-50703049 | Msa1331240:intron | 25.0% |
| ! | AATGATCATCTCAAAATATC+CGG | + | chr8_4:50703138-50703157 | Msa1331240:intron | 25.0% |
| ! | CTATATGTTACTATCGAAAA+TGG | - | chr8_4:50703244-50703263 | None:intergenic | 25.0% |
| !! | CATTTTCGATAGTAACATAT+AGG | + | chr8_4:50703242-50703261 | Msa1331240:intron | 25.0% |
| !!! | TTTCAGGTTAACTATATCTT+GGG | + | chr8_4:50703299-50703318 | Msa1331240:intron | 25.0% |
| ! | AATCTAATATTCTTCATACG+TGG | - | chr8_4:50704089-50704108 | None:intergenic | 25.0% |
| ! | ACGTATGAAGAATATTAGAT+TGG | + | chr8_4:50704088-50704107 | Msa1331240:intron | 25.0% |
| !! | AGAATTATAGTGCTTTTCTT+GGG | - | chr8_4:50704153-50704172 | None:intergenic | 25.0% |
| !! | TAGAATTATAGTGCTTTTCT+TGG | - | chr8_4:50704154-50704173 | None:intergenic | 25.0% |
| ! | CAACAATAGAAAAAAGGATT+TGG | - | chr8_4:50704225-50704244 | None:intergenic | 25.0% |
| ! | TAGATGCAACAATAGAAAAA+AGG | - | chr8_4:50704231-50704250 | None:intergenic | 25.0% |
| !! | AATTTGAAGTGATATTGATC+CGG | - | chr8_4:50704349-50704368 | None:intergenic | 25.0% |
| !! | ATTCGTTTTAGATTGCTGAA+AGG | - | chr8_4:50701532-50701551 | None:intergenic | 30.0% |
| ! | AGCAATCTAAAACGAATTTC+AGG | + | chr8_4:50701535-50701554 | Msa1331240:CDS | 30.0% |
| GAGAGTAGAAATCAGAATAA+AGG | + | chr8_4:50701562-50701581 | Msa1331240:CDS | 30.0% | |
| ACATTGTGCTTCTAACTAAT+TGG | + | chr8_4:50701638-50701657 | Msa1331240:intron | 30.0% | |
| !! | GCTTATTACAAAGCTTTAGA+CGG | + | chr8_4:50701694-50701713 | Msa1331240:intron | 30.0% |
| ! | AATGGAAGCAGTTTAACTTT+AGG | - | chr8_4:50701772-50701791 | None:intergenic | 30.0% |
| AGTTAAACTGCTTCCATTTA+AGG | + | chr8_4:50701774-50701793 | Msa1331240:CDS | 30.0% | |
| GTTAAACTGCTTCCATTTAA+GGG | + | chr8_4:50701775-50701794 | Msa1331240:CDS | 30.0% | |
| AACAGTCACAAAATAGATAG+TGG | - | chr8_4:50701877-50701896 | None:intergenic | 30.0% | |
| GAAACTTTAGATCTGATATG+TGG | + | chr8_4:50702351-50702370 | Msa1331240:intron | 30.0% | |
| TTTACAGAGAATAGAAGATG+AGG | + | chr8_4:50702418-50702437 | Msa1331240:intron | 30.0% | |
| TTACAGAGAATAGAAGATGA+GGG | + | chr8_4:50702419-50702438 | Msa1331240:intron | 30.0% | |
| GTCTGTAACATCAAAAAAGT+AGG | + | chr8_4:50702464-50702483 | Msa1331240:intron | 30.0% | |
| ! | AAGGGAGATAAAAATTTGCT+AGG | - | chr8_4:50702535-50702554 | None:intergenic | 30.0% |
| CTATATGAAATTGAGTGACT+TGG | - | chr8_4:50702858-50702877 | None:intergenic | 30.0% | |
| ATGATAGAACCGGATTAAAT+CGG | - | chr8_4:50702930-50702949 | None:intergenic | 30.0% | |
| GTTATTCCAAAACCTGATAA+TGG | + | chr8_4:50703057-50703076 | Msa1331240:intron | 30.0% | |
| TACTATCGAAAATGGTTAGA+AGG | - | chr8_4:50703236-50703255 | None:intergenic | 30.0% | |
| CGATAGTAACATATAGGAAT+TGG | + | chr8_4:50703248-50703267 | Msa1331240:intron | 30.0% | |
| TATAGTTAACCTGAAACACA+AGG | - | chr8_4:50703295-50703314 | None:intergenic | 30.0% | |
| !! | GTTTCAGGTTAACTATATCT+TGG | + | chr8_4:50703298-50703317 | Msa1331240:intron | 30.0% |
| !! | ACATTAGGTTGATGTATTTG+AGG | - | chr8_4:50703468-50703487 | None:intergenic | 30.0% |
| TCAAGACTAACTTCTACATT+AGG | - | chr8_4:50703483-50703502 | None:intergenic | 30.0% | |
| TATCAAGTTCATGTAGAAGA+GGG | - | chr8_4:50703554-50703573 | None:intergenic | 30.0% | |
| ATATCAAGTTCATGTAGAAG+AGG | - | chr8_4:50703555-50703574 | None:intergenic | 30.0% | |
| CTTCTACATGAACTTGATAT+TGG | + | chr8_4:50703555-50703574 | Msa1331240:intron | 30.0% | |
| CATCAAGAAAACCAAGATTA+GGG | - | chr8_4:50703710-50703729 | None:intergenic | 30.0% | |
| TGACAATGTTGACAATTCTA+AGG | + | chr8_4:50703868-50703887 | Msa1331240:intron | 30.0% | |
| AATAGCTCATAGCTATATGT+TGG | + | chr8_4:50703932-50703951 | Msa1331240:intron | 30.0% | |
| TGTGCTTCTAACTAATTGGT+TGG | + | chr8_4:50701642-50701661 | Msa1331240:intron | 35.0% | |
| !! | TATTACAAAGCTTTAGACGG+TGG | + | chr8_4:50701697-50701716 | Msa1331240:intron | 35.0% |
| AAATCACCTGATAGTCTGAA+GGG | - | chr8_4:50701822-50701841 | None:intergenic | 35.0% | |
| AAAATCACCTGATAGTCTGA+AGG | - | chr8_4:50701823-50701842 | None:intergenic | 35.0% | |
| !!! | GTAGGCATAGTTTTAAAACC+CGG | + | chr8_4:50701983-50702002 | Msa1331240:intron | 35.0% |
| ATAGAACAGAGAGATCAACA+AGG | + | chr8_4:50702264-50702283 | Msa1331240:intron | 35.0% | |
| TAGAACAGAGAGATCAACAA+GGG | + | chr8_4:50702265-50702284 | Msa1331240:intron | 35.0% | |
| GGAAAGGAAGAAGATAAAGA+AGG | + | chr8_4:50702286-50702305 | Msa1331240:intron | 35.0% | |
| ATCAATCGTGACTAACATGA+TGG | + | chr8_4:50702329-50702348 | Msa1331240:intron | 35.0% | |
| AGAATAGAAGATGAGGGTAA+AGG | + | chr8_4:50702425-50702444 | Msa1331240:CDS | 35.0% | |
| TTTAATCCGGTTCTATCATG+CGG | + | chr8_4:50702931-50702950 | Msa1331240:intron | 35.0% | |
| !!! | CATAGTTTTAAAACTCGGAC+CGG | - | chr8_4:50703022-50703041 | None:intergenic | 35.0% |
| AACTATGATTGTAGGTGGAT+TGG | + | chr8_4:50703035-50703054 | Msa1331240:intron | 35.0% | |
| ! | AATGGTCCATTATCAGGTTT+TGG | - | chr8_4:50703066-50703085 | None:intergenic | 35.0% |
| CATTGAAACTGAGAATGCAT+CGG | - | chr8_4:50703177-50703196 | None:intergenic | 35.0% | |
| TCGAAAATGGTTAGAAGGTT+AGG | - | chr8_4:50703231-50703250 | None:intergenic | 35.0% | |
| ! | TTTTTGCTTCCTTGTGTTTC+AGG | + | chr8_4:50703283-50703302 | Msa1331240:intron | 35.0% |
| !! | ATTGTGATGATGGTAAGACA+TGG | + | chr8_4:50703426-50703445 | Msa1331240:intron | 35.0% |
| GCTGCACAAATAAATGTATC+AGG | - | chr8_4:50703597-50703616 | None:intergenic | 35.0% | |
| GCATCAAGAAAACCAAGATT+AGG | - | chr8_4:50703711-50703730 | None:intergenic | 35.0% | |
| ACAACTCCAAAGATATGCTT+GGG | - | chr8_4:50703743-50703762 | None:intergenic | 35.0% | |
| !! | GTATATGGCTTTGTCTAACA+TGG | + | chr8_4:50703817-50703836 | Msa1331240:intron | 35.0% |
| !!! | GTCGCTTTTCTCTTTTAAGT+TGG | + | chr8_4:50703839-50703858 | Msa1331240:intron | 35.0% |
| AAAACCAGCAGATGAGAATG+TGG | + | chr8_4:50701455-50701474 | Msa1331240:CDS | 40.0% | |
| ! | AGCATTTTCAGTAGACACAC+AGG | - | chr8_4:50701488-50701507 | None:intergenic | 40.0% |
| !!! | CATAGTTTTAAAACCCGGAC+CGG | + | chr8_4:50701988-50702007 | Msa1331240:intron | 40.0% |
| ATAGAAGATGAGGGTAAAGG+AGG | + | chr8_4:50702428-50702447 | Msa1331240:CDS | 40.0% | |
| GATGTTACAGACTTGTAGTG+CGG | - | chr8_4:50702456-50702475 | None:intergenic | 40.0% | |
| ! | GATGACTCGGCTATATAACT+CGG | - | chr8_4:50702908-50702927 | None:intergenic | 40.0% |
| ! | GAGTCATTGGTTGAACCATT+GGG | - | chr8_4:50702969-50702988 | None:intergenic | 40.0% |
| ! | TGAGTCATTGGTTGAACCAT+TGG | - | chr8_4:50702970-50702989 | None:intergenic | 40.0% |
| TGGAGTAATGGTCCATTATC+AGG | - | chr8_4:50703072-50703091 | None:intergenic | 40.0% | |
| AAGATGTTGTTGCAGCATAC+TGG | - | chr8_4:50703092-50703111 | None:intergenic | 40.0% | |
| !!! | TCGTGATTTTTCAAGCTCTC+AGG | + | chr8_4:50703199-50703218 | Msa1331240:intron | 40.0% |
| CTTCTATGATGAACTTGGAC+TGG | - | chr8_4:50703374-50703393 | None:intergenic | 40.0% | |
| ACGCACTTCTATGATGAACT+TGG | - | chr8_4:50703379-50703398 | None:intergenic | 40.0% | |
| TGTAGTACCGTTTATCCCAA+GGG | - | chr8_4:50703406-50703425 | None:intergenic | 40.0% | |
| TTGTAGTACCGTTTATCCCA+AGG | - | chr8_4:50703407-50703426 | None:intergenic | 40.0% | |
| CGGTACTACAATTGTGATGA+TGG | + | chr8_4:50703416-50703435 | Msa1331240:CDS | 40.0% | |
| ATACTGCCCAAGCATATCTT+TGG | + | chr8_4:50703734-50703753 | Msa1331240:CDS | 40.0% | |
| CACAACTCCAAAGATATGCT+TGG | - | chr8_4:50703744-50703763 | None:intergenic | 40.0% | |
| AGCTCATAGCTATATGTTGG+AGG | + | chr8_4:50703935-50703954 | Msa1331240:intron | 40.0% | |
| AAGTCAATAGACTGCAACTG+CGG | - | chr8_4:50704049-50704068 | None:intergenic | 40.0% | |
| !! | CAGTTGCAGTCTATTGACTT+CGG | + | chr8_4:50704049-50704068 | Msa1331240:intron | 40.0% |
| ! | TCAAATCTGCTAGTCTGCAA+AGG | - | chr8_4:50704278-50704297 | None:intergenic | 40.0% |
| TTGAAGTGATATTGATCCGG+TGG | - | chr8_4:50704346-50704365 | None:intergenic | 40.0% | |
| GAATCCACATTCTCATCTGC+TGG | - | chr8_4:50701462-50701481 | None:intergenic | 45.0% | |
| CTTCCATTTAAGGGTCCAAG+TGG | + | chr8_4:50701784-50701803 | Msa1331240:CDS | 45.0% | |
| TCTCCACTTGGACCCTTAAA+TGG | - | chr8_4:50701790-50701809 | None:intergenic | 45.0% | |
| GGAAAACCCTTCAGACTATC+AGG | + | chr8_4:50701813-50701832 | Msa1331240:CDS | 45.0% | |
| ATCCAATAAGCAGACCGAAC+CGG | - | chr8_4:50702061-50702080 | None:intergenic | 45.0% | |
| GTTCGGTCTGCTTATTGGAT+CGG | + | chr8_4:50702061-50702080 | Msa1331240:intron | 45.0% | |
| TTCGGTCTGCTTATTGGATC+GGG | + | chr8_4:50702062-50702081 | Msa1331240:intron | 45.0% | |
| !!! | CGGTTTTTAGCGAGTCATAC+CGG | - | chr8_4:50702110-50702129 | None:intergenic | 45.0% |
| CGGTATGACTCGCTAAAAAC+CGG | + | chr8_4:50702108-50702127 | Msa1331240:intron | 45.0% | |
| CGCTAAAAACCGGTCAAAAC+CGG | + | chr8_4:50702118-50702137 | Msa1331240:intron | 45.0% | |
| !!! | CTTTTTTTATTGACCCGGCC+CGG | - | chr8_4:50702165-50702184 | None:intergenic | 45.0% |
| CAGAGAGATCAACAAGGGAA+AGG | + | chr8_4:50702270-50702289 | Msa1331240:intron | 45.0% | |
| CCGGATTAAATCGGATGACT+CGG | - | chr8_4:50702921-50702940 | None:intergenic | 45.0% | |
| CCGAGTCATCCGATTTAATC+CGG | + | chr8_4:50702918-50702937 | Msa1331240:intron | 45.0% | |
| GTTGAACCGCATGATAGAAC+CGG | - | chr8_4:50702940-50702959 | None:intergenic | 45.0% | |
| TTACTGGGTCAGTGAGTCAT+TGG | - | chr8_4:50702982-50703001 | None:intergenic | 45.0% | |
| !! | ATTGACTCGGTGAGGTTACT+GGG | - | chr8_4:50702997-50703016 | None:intergenic | 45.0% |
| GTTGCAGCATACTGGAGTAA+TGG | - | chr8_4:50703084-50703103 | None:intergenic | 45.0% | |
| ! | ATGATGCGCTATTTCACGCA+GGG | - | chr8_4:50703685-50703704 | None:intergenic | 45.0% |
| ! | AATGATGCGCTATTTCACGC+AGG | - | chr8_4:50703686-50703705 | None:intergenic | 45.0% |
| ! | TCTAAGGTTTCATAGCTGCG+AGG | + | chr8_4:50703884-50703903 | Msa1331240:intron | 45.0% |
| CTAAGGTTTCATAGCTGCGA+GGG | + | chr8_4:50703885-50703904 | Msa1331240:intron | 45.0% | |
| ! | CATTTTATCACCGCCAATGC+AGG | + | chr8_4:50704013-50704032 | Msa1331240:intron | 45.0% |
| AGTTCCAAAACCTGCATTGG+CGG | - | chr8_4:50704026-50704045 | None:intergenic | 45.0% | |
| !! | TCTATTGACTTCGGTGTCGT+TGG | + | chr8_4:50704058-50704077 | Msa1331240:intron | 45.0% |
| TAAGGGTCCAAGTGGAGAAG+AGG | + | chr8_4:50701792-50701811 | Msa1331240:CDS | 50.0% | |
| ! | GGGTTTTCCTCTTCTCCACT+TGG | - | chr8_4:50701802-50701821 | None:intergenic | 50.0% |
| !!! | TTTTAAAACCCGGACCGGAC+CGG | + | chr8_4:50701993-50702012 | Msa1331240:intron | 50.0% |
| GCAGTTGAACCGGTCAAAAC+CGG | + | chr8_4:50702088-50702107 | Msa1331240:intron | 50.0% | |
| !!! | CGAGTCATACCGGTTTTGAC+CGG | - | chr8_4:50702100-50702119 | None:intergenic | 50.0% |
| TGGTTGAACCATTGGGTCAC+TGG | - | chr8_4:50702962-50702981 | None:intergenic | 50.0% | |
| !! | CATTGACTCGGTGAGGTTAC+TGG | - | chr8_4:50702998-50703017 | None:intergenic | 50.0% |
| AACCTCACCGAGTCAATGAC+CGG | + | chr8_4:50703000-50703019 | Msa1331240:intron | 50.0% | |
| ! | ATAGAAGTGCGTCGATCCCT+TGG | + | chr8_4:50703387-50703406 | Msa1331240:CDS | 50.0% |
| ! | TAGAAGTGCGTCGATCCCTT+GGG | + | chr8_4:50703388-50703407 | Msa1331240:CDS | 50.0% |
| CGTCGATCCCTTGGGATAAA+CGG | + | chr8_4:50703396-50703415 | Msa1331240:CDS | 50.0% | |
| TGCAACTTCATGCCCTCAAC+TGG | + | chr8_4:50703617-50703636 | Msa1331240:CDS | 50.0% | |
| TGTCCAGCTTCACCAGTTGA+GGG | - | chr8_4:50703632-50703651 | None:intergenic | 50.0% | |
| ATGTCCAGCTTCACCAGTTG+AGG | - | chr8_4:50703633-50703652 | None:intergenic | 50.0% | |
| GCGCATCATTGCCCTAATCT+TGG | + | chr8_4:50703696-50703715 | Msa1331240:CDS | 50.0% | |
| GGGCATCACTTCTGCATCAA+TGG | + | chr8_4:50703905-50703924 | Msa1331240:intron | 50.0% | |
| ! | ATCACCGCCAATGCAGGTTT+TGG | + | chr8_4:50704019-50704038 | Msa1331240:intron | 50.0% |
| CGGAGTTCCAAAACCTGCAT+TGG | - | chr8_4:50704029-50704048 | None:intergenic | 50.0% | |
| CAAGTGTCTAACTGCTCCAC+CGG | + | chr8_4:50704327-50704346 | Msa1331240:CDS | 50.0% | |
| ! | GCTTTAGACGGTGGAGATCG+TGG | + | chr8_4:50701706-50701725 | Msa1331240:intron | 55.0% |
| ! | GGTGGAGATCGTGGCATTGA+TGG | + | chr8_4:50701715-50701734 | Msa1331240:CDS | 55.0% |
| !! | GACCGGTTCGGTCTGCTTAT+TGG | + | chr8_4:50702056-50702075 | Msa1331240:intron | 55.0% |
| GATCGGGCATGCAGTTGAAC+CGG | + | chr8_4:50702078-50702097 | Msa1331240:intron | 55.0% | |
| ACCGGTCAAAACCGGTGACT+CGG | + | chr8_4:50702126-50702145 | Msa1331240:intron | 55.0% | |
| !! | ACTCGGCCGGTTTGATGAAC+CGG | + | chr8_4:50702143-50702162 | Msa1331240:intron | 55.0% |
| CGGTTCAACCAGTGACCCAA+TGG | + | chr8_4:50702951-50702970 | Msa1331240:intron | 55.0% | |
| ! | ACTCGGACCGGTCATTGACT+CGG | - | chr8_4:50703010-50703029 | None:intergenic | 55.0% |
| !! | CATCGGTTTCGCAGTTGCAC+CGG | - | chr8_4:50703160-50703179 | None:intergenic | 55.0% |
| ATGCCCTCAACTGGTGAAGC+TGG | + | chr8_4:50703626-50703645 | Msa1331240:CDS | 55.0% | |
| !!! | GCCGAGTCACCGGTTTTGAC+CGG | - | chr8_4:50702130-50702149 | None:intergenic | 60.0% |
| ! | GTCAAAACCGGTGACTCGGC+CGG | + | chr8_4:50702130-50702149 | Msa1331240:intron | 60.0% |
| CATCAAACCGGCCGAGTCAC+CGG | - | chr8_4:50702140-50702159 | None:intergenic | 60.0% | |
| !! | CTCGGCCGGTTTGATGAACC+GGG | + | chr8_4:50702144-50702163 | Msa1331240:intron | 60.0% |
| !! | GACCGGTCATTGACTCGGTG+AGG | - | chr8_4:50703005-50703024 | None:intergenic | 60.0% |
| CGGTTCACGGTTCGACCGGT+CGG | - | chr8_4:50702029-50702048 | None:intergenic | 65.0% | |
| CGACCGGTCGAACCGTGAAC+CGG | + | chr8_4:50702027-50702046 | Msa1331240:intron | 65.0% | |
| GACCGGTCGAACCGTGAACC+GGG | + | chr8_4:50702028-50702047 | Msa1331240:intron | 65.0% | |
| ACCGGTCGAACCGTGAACCG+GGG | + | chr8_4:50702029-50702048 | Msa1331240:intron | 65.0% | |
| TCCCCGGTTCACGGTTCGAC+CGG | - | chr8_4:50702033-50702052 | None:intergenic | 65.0% | |
| AACCGGGGACGTGACCGGTT+CGG | + | chr8_4:50702044-50702063 | Msa1331240:intron | 65.0% | |
| !! | GCCGGTTTGATGAACCGGGC+CGG | + | chr8_4:50702148-50702167 | Msa1331240:intron | 65.0% |
| CCCGGCCCGGTTCATCAAAC+CGG | - | chr8_4:50702152-50702171 | None:intergenic | 65.0% | |
| ! | CCGGTTTGATGAACCGGGCC+GGG | + | chr8_4:50702149-50702168 | Msa1331240:intron | 65.0% |
| AAACCCGGACCGGACCGGAC+CGG | + | chr8_4:50701998-50702017 | Msa1331240:intron | 70.0% | |
| CACGGTTCGACCGGTCGGAC+CGG | - | chr8_4:50702024-50702043 | None:intergenic | 70.0% | |
| CCGGTCACGTCCCCGGTTCA+CGG | - | chr8_4:50702042-50702061 | None:intergenic | 70.0% | |
| CCGTGAACCGGGGACGTGAC+CGG | + | chr8_4:50702039-50702058 | Msa1331240:intron | 70.0% | |
| GACCGAACCGGTCACGTCCC+CGG | - | chr8_4:50702049-50702068 | None:intergenic | 70.0% | |
| GTTCGACCGGTCGGACCGGC+CGG | - | chr8_4:50702020-50702039 | None:intergenic | 75.0% | |
| ! | TCGGACCGGCCGGTCCGGTC+CGG | - | chr8_4:50702010-50702029 | None:intergenic | 80.0% |
| ! | ACCGGACCGGCCGGTCCGAC+CGG | + | chr8_4:50702011-50702030 | Msa1331240:intron | 80.0% |
| ! | ACCGGTCGGACCGGCCGGTC+CGG | - | chr8_4:50702015-50702034 | None:intergenic | 80.0% |
| ! | CGGCCGGTCCGGTCCGGTCC+GGG | - | chr8_4:50702004-50702023 | None:intergenic | 85.0% |
| ! | CCGGCCGGTCCGGTCCGGTC+CGG | - | chr8_4:50702005-50702024 | None:intergenic | 85.0% |
| ! | CCGGACCGGACCGGACCGGC+CGG | + | chr8_4:50702002-50702021 | Msa1331240:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 50701442 | 50704374 | 50701442 | ID=Msa1331240;Name=Msa1331240 |
| chr8_4 | mRNA | 50701442 | 50704374 | 50701442 | ID=Msa1331240-mRNA-1;Parent=Msa1331240;Name=Msa1331240-mRNA-1;_AED=0.95;_eAED=0.95;_QI=0|0|0|0.16|0.6|1|6|0|241 |
| chr8_4 | exon | 50701442 | 50701583 | 50701442 | ID=Msa1331240-mRNA-1:exon:14854;Parent=Msa1331240-mRNA-1 |
| chr8_4 | exon | 50701713 | 50701834 | 50701713 | ID=Msa1331240-mRNA-1:exon:14855;Parent=Msa1331240-mRNA-1 |
| chr8_4 | exon | 50702425 | 50702481 | 50702425 | ID=Msa1331240-mRNA-1:exon:14856;Parent=Msa1331240-mRNA-1 |
| chr8_4 | exon | 50703305 | 50703437 | 50703305 | ID=Msa1331240-mRNA-1:exon:14857;Parent=Msa1331240-mRNA-1 |
| chr8_4 | exon | 50703616 | 50703793 | 50703616 | ID=Msa1331240-mRNA-1:exon:14858;Parent=Msa1331240-mRNA-1 |
| chr8_4 | exon | 50704284 | 50704374 | 50704284 | ID=Msa1331240-mRNA-1:exon:14859;Parent=Msa1331240-mRNA-1 |
| chr8_4 | CDS | 50701442 | 50701583 | 50701442 | ID=Msa1331240-mRNA-1:cds;Parent=Msa1331240-mRNA-1 |
| chr8_4 | CDS | 50701713 | 50701834 | 50701713 | ID=Msa1331240-mRNA-1:cds;Parent=Msa1331240-mRNA-1 |
| chr8_4 | CDS | 50702425 | 50702481 | 50702425 | ID=Msa1331240-mRNA-1:cds;Parent=Msa1331240-mRNA-1 |
| chr8_4 | CDS | 50703305 | 50703437 | 50703305 | ID=Msa1331240-mRNA-1:cds;Parent=Msa1331240-mRNA-1 |
| chr8_4 | CDS | 50703616 | 50703793 | 50703616 | ID=Msa1331240-mRNA-1:cds;Parent=Msa1331240-mRNA-1 |
| chr8_4 | CDS | 50704284 | 50704374 | 50704284 | ID=Msa1331240-mRNA-1:cds;Parent=Msa1331240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
