Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0817120 | XP_003612082.1 | 91.026 | 78 | 7 | 0 | 1 | 78 | 1 | 78 | 4.84e-44 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0817120 | sp|Q9FVX1|GRXC3_ARATH | 56.338 | 71 | 31 | 0 | 8 | 78 | 9 | 79 | 5.19e-21 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0817120 | G7KG98 | 91.026 | 78 | 7 | 0 | 1 | 78 | 1 | 78 | 2.31e-44 | 149 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003220 | Msa0817120 | 0.801392 | 9.202176e-49 | -8.615850e-47 |
| Msa0005270 | Msa0817120 | 0.819601 | 1.066227e-52 | -8.615850e-47 |
| Msa0010770 | Msa0817120 | 0.811631 | 6.355383e-51 | -8.615850e-47 |
| Msa0017320 | Msa0817120 | 0.816527 | 5.281724e-52 | -8.615850e-47 |
| Msa0020390 | Msa0817120 | 0.821179 | 4.631861e-53 | -8.615850e-47 |
| Msa0027890 | Msa0817120 | 0.800693 | 1.278678e-48 | -8.615850e-47 |
| Msa0030300 | Msa0817120 | 0.833908 | 4.069603e-56 | -8.615850e-47 |
| Msa0031180 | Msa0817120 | 0.804311 | 2.296158e-49 | -8.615850e-47 |
| Msa0033880 | Msa0817120 | 0.823932 | 1.061332e-53 | -8.615850e-47 |
| Msa0038870 | Msa0817120 | 0.814334 | 1.624740e-51 | -8.615850e-47 |
| Msa0043980 | Msa0817120 | 0.815450 | 9.189187e-52 | -8.615850e-47 |
| Msa0047250 | Msa0817120 | 0.802710 | 4.931400e-49 | -8.615850e-47 |
| Msa0051630 | Msa0817120 | 0.805641 | 1.210159e-49 | -8.615850e-47 |
| Msa0051740 | Msa0817120 | 0.805427 | 1.342045e-49 | -8.615850e-47 |
| Msa0051750 | Msa0817120 | 0.809791 | 1.589143e-50 | -8.615850e-47 |
| Msa0052860 | Msa0817120 | 0.815890 | 7.329573e-52 | -8.615850e-47 |
| Msa0054820 | Msa0817120 | 0.807174 | 5.749017e-50 | -8.615850e-47 |
| Msa0058310 | Msa0817120 | 0.801918 | 7.175898e-49 | -8.615850e-47 |
| Msa0059890 | Msa0817120 | 0.826696 | 2.354036e-54 | -8.615850e-47 |
| Msa0065650 | Msa0817120 | 0.806700 | 7.242531e-50 | -8.615850e-47 |
| Msa0068430 | Msa0817120 | 0.808985 | 2.366762e-50 | -8.615850e-47 |
| Msa0074750 | Msa0817120 | 0.812758 | 3.609316e-51 | -8.615850e-47 |
| Msa0077900 | Msa0817120 | 0.836435 | 9.373273e-57 | -8.615850e-47 |
| Msa0078480 | Msa0817120 | 0.812861 | 3.426131e-51 | -8.615850e-47 |
| Msa0081650 | Msa0817120 | 0.828980 | 6.649101e-55 | -8.615850e-47 |
| Msa0084430 | Msa0817120 | 0.826734 | 2.306289e-54 | -8.615850e-47 |
| Msa0086420 | Msa0817120 | 0.834574 | 2.769756e-56 | -8.615850e-47 |
| Msa0090390 | Msa0817120 | 0.808799 | 2.592960e-50 | -8.615850e-47 |
| Msa0090550 | Msa0817120 | 0.847680 | 9.921629e-60 | -8.615850e-47 |
| Msa0092170 | Msa0817120 | 0.807204 | 5.667004e-50 | -8.615850e-47 |
| Msa0092410 | Msa0817120 | 0.800392 | 1.472937e-48 | -8.615850e-47 |
| Msa0095360 | Msa0817120 | 0.833960 | 3.950269e-56 | -8.615850e-47 |
| Msa0095770 | Msa0817120 | 0.832953 | 7.042313e-56 | -8.615850e-47 |
| Msa0096580 | Msa0817120 | 0.820063 | 8.359664e-53 | -8.615850e-47 |
| Msa0100160 | Msa0817120 | 0.800832 | 1.197495e-48 | -8.615850e-47 |
| Msa0104230 | Msa0817120 | 0.812366 | 4.396343e-51 | -8.615850e-47 |
| Msa0104800 | Msa0817120 | 0.805375 | 1.375821e-49 | -8.615850e-47 |
| Msa0111080 | Msa0817120 | 0.827229 | 1.755760e-54 | -8.615850e-47 |
| Msa0610130 | Msa0817120 | 0.802846 | 4.622061e-49 | -8.615850e-47 |
| Msa0614510 | Msa0817120 | 0.819992 | 8.676275e-53 | -8.615850e-47 |
| Msa0618950 | Msa0817120 | 0.812706 | 3.704504e-51 | -8.615850e-47 |
| Msa0618970 | Msa0817120 | 0.803090 | 4.114990e-49 | -8.615850e-47 |
| Msa0619920 | Msa0817120 | 0.809312 | 2.013613e-50 | -8.615850e-47 |
| Msa0620330 | Msa0817120 | 0.841598 | 4.312873e-58 | -8.615850e-47 |
| Msa0620620 | Msa0817120 | 0.805091 | 1.578383e-49 | -8.615850e-47 |
| Msa0626220 | Msa0817120 | 0.807972 | 3.892160e-50 | -8.615850e-47 |
| Msa0628290 | Msa0817120 | 0.809036 | 2.306972e-50 | -8.615850e-47 |
| Msa0630950 | Msa0817120 | 0.803055 | 4.183728e-49 | -8.615850e-47 |
| Msa0640940 | Msa0817120 | 0.837041 | 6.567118e-57 | -8.615850e-47 |
| Msa0641730 | Msa0817120 | 0.803327 | 3.675437e-49 | -8.615850e-47 |
| Msa0643320 | Msa0817120 | 0.806713 | 7.196340e-50 | -8.615850e-47 |
| Msa0652690 | Msa0817120 | 0.805010 | 1.640883e-49 | -8.615850e-47 |
| Msa0662630 | Msa0817120 | 0.813402 | 2.606850e-51 | -8.615850e-47 |
| Msa0679360 | Msa0817120 | 0.832944 | 7.077954e-56 | -8.615850e-47 |
| Msa0679550 | Msa0817120 | 0.821818 | 3.299100e-53 | -8.615850e-47 |
| Msa0680480 | Msa0817120 | 0.805989 | 1.022791e-49 | -8.615850e-47 |
| Msa0683140 | Msa0817120 | 0.800388 | 1.475549e-48 | -8.615850e-47 |
| Msa0686080 | Msa0817120 | 0.846269 | 2.415029e-59 | -8.615850e-47 |
| Msa0689420 | Msa0817120 | 0.803216 | 3.874684e-49 | -8.615850e-47 |
| Msa0689780 | Msa0817120 | 0.812799 | 3.534227e-51 | -8.615850e-47 |
| Msa0697720 | Msa0817120 | 0.802072 | 6.672407e-49 | -8.615850e-47 |
| Msa0704920 | Msa0817120 | 0.803695 | 3.083790e-49 | -8.615850e-47 |
| Msa0705390 | Msa0817120 | 0.834495 | 2.899894e-56 | -8.615850e-47 |
| Msa0705990 | Msa0817120 | 0.827348 | 1.644029e-54 | -8.615850e-47 |
| Msa0709120 | Msa0817120 | 0.805962 | 1.035979e-49 | -8.615850e-47 |
| Msa0716960 | Msa0817120 | 0.824521 | 7.717184e-54 | -8.615850e-47 |
| Msa0717010 | Msa0817120 | 0.815672 | 8.197514e-52 | -8.615850e-47 |
| Msa0721280 | Msa0817120 | 0.800601 | 1.335378e-48 | -8.615850e-47 |
| Msa0721340 | Msa0817120 | 0.802203 | 6.270939e-49 | -8.615850e-47 |
| Msa0726080 | Msa0817120 | 0.835717 | 1.426205e-56 | -8.615850e-47 |
| Msa0743530 | Msa0817120 | 0.816922 | 4.306580e-52 | -8.615850e-47 |
| Msa0746170 | Msa0817120 | 0.839699 | 1.355156e-57 | -8.615850e-47 |
| Msa0746210 | Msa0817120 | 0.833874 | 4.150127e-56 | -8.615850e-47 |
| Msa0748730 | Msa0817120 | 0.808951 | 2.406770e-50 | -8.615850e-47 |
| Msa0749440 | Msa0817120 | 0.818575 | 1.824627e-52 | -8.615850e-47 |
| Msa0750850 | Msa0817120 | 0.831428 | 1.679196e-55 | -8.615850e-47 |
| Msa0751850 | Msa0817120 | 0.805157 | 1.528410e-49 | -8.615850e-47 |
| Msa0758130 | Msa0817120 | 0.806448 | 8.187113e-50 | -8.615850e-47 |
| Msa0763890 | Msa0817120 | 0.825449 | 4.660462e-54 | -8.615850e-47 |
| Msa0763920 | Msa0817120 | 0.831775 | 1.378557e-55 | -8.615850e-47 |
| Msa0765180 | Msa0817120 | 0.805776 | 1.133804e-49 | -8.615850e-47 |
| Msa0773590 | Msa0817120 | 0.812931 | 3.306671e-51 | -8.615850e-47 |
| Msa0774750 | Msa0817120 | 0.808899 | 2.468300e-50 | -8.615850e-47 |
| Msa0777320 | Msa0817120 | 0.804835 | 1.785383e-49 | -8.615850e-47 |
| Msa0781270 | Msa0817120 | 0.809921 | 1.490116e-50 | -8.615850e-47 |
| Msa0789560 | Msa0817120 | 0.805372 | 1.378395e-49 | -8.615850e-47 |
| Msa0805420 | Msa0817120 | 0.818581 | 1.819341e-52 | -8.615850e-47 |
| Msa0809140 | Msa0817120 | 0.805250 | 1.461950e-49 | -8.615850e-47 |
| Msa0811040 | Msa0817120 | 0.819649 | 1.039352e-52 | -8.615850e-47 |
| Msa0812290 | Msa0817120 | 0.800768 | 1.234175e-48 | -8.615850e-47 |
| Msa0817120 | Msa0821800 | 0.803770 | 2.974361e-49 | -8.615850e-47 |
| Msa0817120 | Msa0822170 | 0.809835 | 1.554814e-50 | -8.615850e-47 |
| Msa0817120 | Msa0823500 | 0.816092 | 6.607610e-52 | -8.615850e-47 |
| Msa0817120 | Msa0827280 | 0.812336 | 4.463691e-51 | -8.615850e-47 |
| Msa0817120 | Msa0829220 | 0.815608 | 8.471147e-52 | -8.615850e-47 |
| Msa0817120 | Msa0836500 | 0.819644 | 1.042526e-52 | -8.615850e-47 |
| Msa0817120 | Msa0837780 | 0.821858 | 3.228938e-53 | -8.615850e-47 |
| Msa0817120 | Msa0842770 | 0.820472 | 6.735245e-53 | -8.615850e-47 |
| Msa0817120 | Msa0844110 | 0.818986 | 1.472017e-52 | -8.615850e-47 |
| Msa0817120 | Msa0846230 | 0.836964 | 6.870772e-57 | -8.615850e-47 |
| Msa0817120 | Msa0847470 | 0.801451 | 8.948722e-49 | -8.615850e-47 |
| Msa0817120 | Msa0853950 | 0.807075 | 6.034827e-50 | -8.615850e-47 |
| Msa0817120 | Msa0861470 | 0.821179 | 4.632497e-53 | -8.615850e-47 |
| Msa0817120 | Msa0861570 | 0.823965 | 1.042724e-53 | -8.615850e-47 |
| Msa0817120 | Msa0861830 | 0.801848 | 7.419275e-49 | -8.615850e-47 |
| Msa0817120 | Msa0862500 | 0.817986 | 2.481109e-52 | -8.615850e-47 |
| Msa0817120 | Msa0866400 | 0.819838 | 9.409743e-53 | -8.615850e-47 |
| Msa0817120 | Msa0866410 | 0.800822 | 1.203409e-48 | -8.615850e-47 |
| Msa0817120 | Msa0877710 | 0.817790 | 2.746279e-52 | -8.615850e-47 |
| Msa0817120 | Msa0880810 | 0.825117 | 5.582778e-54 | -8.615850e-47 |
| Msa0817120 | Msa0901320 | 0.823184 | 1.588277e-53 | -8.615850e-47 |
| Msa0817120 | Msa0902830 | 0.806529 | 7.869354e-50 | -8.615850e-47 |
| Msa0817120 | Msa0918390 | 0.802881 | 4.545004e-49 | -8.615850e-47 |
| Msa0817120 | Msa0945120 | 0.801427 | 9.050796e-49 | -8.615850e-47 |
| Msa0817120 | Msa0945240 | 0.812947 | 3.280790e-51 | -8.615850e-47 |
| Msa0817120 | Msa0957870 | 0.819688 | 1.018522e-52 | -8.615850e-47 |
| Msa0817120 | Msa0957970 | 0.816914 | 4.326021e-52 | -8.615850e-47 |
| Msa0817120 | Msa0958030 | 0.816235 | 6.140908e-52 | -8.615850e-47 |
| Msa0817120 | Msa0990580 | 0.828564 | 8.380876e-55 | -8.615850e-47 |
| Msa0817120 | Msa0992580 | 0.808847 | 2.532417e-50 | -8.615850e-47 |
| Msa0817120 | Msa0992600 | 0.820049 | 8.420941e-53 | -8.615850e-47 |
| Msa0817120 | Msa0994370 | 0.835754 | 1.395881e-56 | -8.615850e-47 |
| Msa0817120 | Msa1024750 | 0.805105 | 1.567068e-49 | -8.615850e-47 |
| Msa0817120 | Msa1026640 | 0.812361 | 4.407498e-51 | -8.615850e-47 |
| Msa0817120 | Msa1034270 | 0.803857 | 2.853590e-49 | -8.615850e-47 |
| Msa0817120 | Msa1037520 | 0.813969 | 1.955042e-51 | -8.615850e-47 |
| Msa0817120 | Msa1042660 | 0.846537 | 2.040557e-59 | -8.615850e-47 |
| Msa0817120 | Msa1048750 | -0.801706 | 7.935662e-49 | -8.615850e-47 |
| Msa0817120 | Msa1063420 | 0.827023 | 1.966247e-54 | -8.615850e-47 |
| Msa0817120 | Msa1070840 | 0.800654 | 1.302503e-48 | -8.615850e-47 |
| Msa0817120 | Msa1071320 | 0.828642 | 8.025160e-55 | -8.615850e-47 |
| Msa0817120 | Msa1072900 | 0.808030 | 3.784251e-50 | -8.615850e-47 |
| Msa0817120 | Msa1077070 | 0.816059 | 6.719857e-52 | -8.615850e-47 |
| Msa0817120 | Msa1080330 | -0.806680 | 7.311883e-50 | -8.615850e-47 |
| Msa0817120 | Msa1081790 | -0.818942 | 1.506388e-52 | -8.615850e-47 |
| Msa0817120 | Msa1089320 | 0.850776 | 1.363946e-60 | -8.615850e-47 |
| Msa0817120 | Msa1098890 | 0.822206 | 2.682063e-53 | -8.615850e-47 |
| Msa0817120 | Msa1113590 | 0.800039 | 1.737384e-48 | -8.615850e-47 |
| Msa0817120 | Msa1121110 | 0.818030 | 2.424827e-52 | -8.615850e-47 |
| Msa0817120 | Msa1122780 | 0.810966 | 8.861112e-51 | -8.615850e-47 |
| Msa0817120 | Msa1127430 | 0.824524 | 7.704342e-54 | -8.615850e-47 |
| Msa0817120 | Msa1128330 | 0.807138 | 5.852347e-50 | -8.615850e-47 |
| Msa0817120 | Msa1130530 | 0.815147 | 1.072722e-51 | -8.615850e-47 |
| Msa0817120 | Msa1143020 | 0.821755 | 3.410968e-53 | -8.615850e-47 |
| Msa0817120 | Msa1144040 | 0.807528 | 4.836647e-50 | -8.615850e-47 |
| Msa0817120 | Msa1152520 | 0.815889 | 7.336480e-52 | -8.615850e-47 |
| Msa0817120 | Msa1156150 | -0.806503 | 7.971140e-50 | -8.615850e-47 |
| Msa0817120 | Msa1163870 | 0.807019 | 6.200053e-50 | -8.615850e-47 |
| Msa0817120 | Msa1166090 | -0.806096 | 9.710871e-50 | -8.615850e-47 |
| Msa0817120 | Msa1167010 | 0.804294 | 2.314537e-49 | -8.615850e-47 |
| Msa0817120 | Msa1177780 | 0.817438 | 3.298170e-52 | -8.615850e-47 |
| Msa0817120 | Msa1178580 | 0.803188 | 3.926809e-49 | -8.615850e-47 |
| Msa0817120 | Msa1188600 | -0.827570 | 1.454361e-54 | -8.615850e-47 |
| Msa0817120 | Msa1197070 | 0.800346 | 1.504414e-48 | -8.615850e-47 |
| Msa0817120 | Msa1199710 | 0.812387 | 4.349247e-51 | -8.615850e-47 |
| Msa0817120 | Msa1205590 | 0.813549 | 2.420043e-51 | -8.615850e-47 |
| Msa0817120 | Msa1206310 | 0.804594 | 2.004315e-49 | -8.615850e-47 |
| Msa0817120 | Msa1206360 | 0.802858 | 4.596288e-49 | -8.615850e-47 |
| Msa0817120 | Msa1206650 | 0.807162 | 5.784443e-50 | -8.615850e-47 |
| Msa0817120 | Msa1207310 | 0.812584 | 3.939695e-51 | -8.615850e-47 |
| Msa0817120 | Msa1207350 | 0.828107 | 1.080341e-54 | -8.615850e-47 |
| Msa0817120 | Msa1209190 | 0.815102 | 1.097888e-51 | -8.615850e-47 |
| Msa0817120 | Msa1211340 | 0.803562 | 3.284944e-49 | -8.615850e-47 |
| Msa0817120 | Msa1215920 | 0.808826 | 2.559265e-50 | -8.615850e-47 |
| Msa0817120 | Msa1218580 | 0.823598 | 1.270900e-53 | -8.615850e-47 |
| Msa0817120 | Msa1230040 | 0.813743 | 2.193439e-51 | -8.615850e-47 |
| Msa0817120 | Msa1233850 | 0.809249 | 2.077220e-50 | -8.615850e-47 |
| Msa0817120 | Msa1242580 | -0.812239 | 4.686724e-51 | -8.615850e-47 |
| Msa0817120 | Msa1250110 | 0.862712 | 4.173768e-64 | -8.615850e-47 |
| Msa0817120 | Msa1250730 | 0.864173 | 1.470631e-64 | -8.615850e-47 |
| Msa0817120 | Msa1257070 | 0.800314 | 1.527694e-48 | -8.615850e-47 |
| Msa0817120 | Msa1258370 | 0.822681 | 2.080003e-53 | -8.615850e-47 |
| Msa0817120 | Msa1259640 | 0.800339 | 1.509935e-48 | -8.615850e-47 |
| Msa0817120 | Msa1265280 | 0.812232 | 4.701581e-51 | -8.615850e-47 |
| Msa0817120 | Msa1270660 | 0.863943 | 1.735261e-64 | -8.615850e-47 |
| Msa0817120 | Msa1270730 | 0.826493 | 2.632230e-54 | -8.615850e-47 |
| Msa0817120 | Msa1276150 | 0.802294 | 6.007075e-49 | -8.615850e-47 |
| Msa0817120 | Msa1286550 | 0.812557 | 3.992523e-51 | -8.615850e-47 |
| Msa0817120 | Msa1295330 | 0.817523 | 3.154821e-52 | -8.615850e-47 |
| Msa0817120 | Msa1295930 | 0.808725 | 2.689436e-50 | -8.615850e-47 |
| Msa0817120 | Msa1297530 | 0.806188 | 9.287498e-50 | -8.615850e-47 |
| Msa0817120 | Msa1307180 | 0.831599 | 1.523731e-55 | -8.615850e-47 |
| Msa0817120 | Msa1307550 | 0.802100 | 6.586195e-49 | -8.615850e-47 |
| Msa0817120 | Msa1316360 | 0.824843 | 6.480867e-54 | -8.615850e-47 |
| Msa0817120 | Msa1316440 | 0.811718 | 6.084654e-51 | -8.615850e-47 |
| Msa0817120 | Msa1331280 | 0.818113 | 2.321969e-52 | -8.615850e-47 |
| Msa0817120 | Msa1331350 | 0.801653 | 8.136512e-49 | -8.615850e-47 |
| Msa0817120 | Msa1332050 | 0.813234 | 2.837754e-51 | -8.615850e-47 |
| Msa0817120 | Msa1335230 | 0.816401 | 5.636337e-52 | -8.615850e-47 |
| Msa0817120 | Msa1336040 | 0.815637 | 8.346195e-52 | -8.615850e-47 |
| Msa0817120 | Msa1337480 | 0.832607 | 8.585153e-56 | -8.615850e-47 |
| Msa0817120 | Msa1339190 | 0.823321 | 1.475179e-53 | -8.615850e-47 |
| Msa0817120 | Msa1340810 | 0.811274 | 7.600704e-51 | -8.615850e-47 |
| Msa0817120 | Msa1341490 | 0.821547 | 3.810044e-53 | -8.615850e-47 |
| Msa0817120 | Msa1355890 | 0.805748 | 1.149240e-49 | -8.615850e-47 |
| Msa0817120 | Msa1357080 | 0.806290 | 8.840480e-50 | -8.615850e-47 |
| Msa0817120 | Msa1357430 | 0.802047 | 6.752473e-49 | -8.615850e-47 |
| Msa0817120 | Msa1357890 | 0.803461 | 3.447904e-49 | -8.615850e-47 |
| Msa0817120 | Msa1359560 | 0.804277 | 2.333919e-49 | -8.615850e-47 |
| Msa0817120 | Msa1364210 | 0.848909 | 4.536355e-60 | -8.615850e-47 |
| Msa0817120 | Msa1366300 | 0.801193 | 1.010733e-48 | -8.615850e-47 |
| Msa0817120 | Msa1370590 | 0.826852 | 2.160885e-54 | -8.615850e-47 |
| Msa0817120 | Msa1371240 | 0.826118 | 3.233663e-54 | -8.615850e-47 |
| Msa0817120 | Msa1371940 | 0.820818 | 5.611215e-53 | -8.615850e-47 |
| Msa0817120 | Msa1372280 | 0.812148 | 4.905219e-51 | -8.615850e-47 |
| Msa0817120 | Msa1372290 | 0.834151 | 3.537281e-56 | -8.615850e-47 |
| Msa0817120 | Msa1376130 | 0.834501 | 2.889348e-56 | -8.615850e-47 |
| Msa0817120 | Msa1377570 | 0.839431 | 1.591270e-57 | -8.615850e-47 |
| Msa0817120 | Msa1382790 | 0.803297 | 3.729173e-49 | -8.615850e-47 |
| Msa0817120 | Msa1384100 | 0.824587 | 7.445694e-54 | -8.615850e-47 |
| Msa0817120 | Msa1389850 | 0.804604 | 1.994372e-49 | -8.615850e-47 |
| Msa0817120 | Msa1396400 | -0.805300 | 1.427023e-49 | -8.615850e-47 |
| Msa0817120 | Msa1398090 | 0.803017 | 4.260858e-49 | -8.615850e-47 |
| Msa0817120 | Msa1400120 | 0.838967 | 2.098730e-57 | -8.615850e-47 |
| Msa0817120 | Msa1401460 | 0.805394 | 1.363430e-49 | -8.615850e-47 |
| Msa0817120 | Msa1407190 | 0.817122 | 3.884727e-52 | -8.615850e-47 |
| Msa0817120 | Msa1416260 | 0.824039 | 1.001684e-53 | -8.615850e-47 |
| Msa0817120 | Msa1420270 | 0.806793 | 6.921378e-50 | -8.615850e-47 |
| Msa0817120 | Msa1423820 | 0.802708 | 4.934639e-49 | -8.615850e-47 |
| Msa0817120 | Msa1426570 | 0.814630 | 1.397330e-51 | -8.615850e-47 |
| Msa0817120 | Msa1428780 | 0.849083 | 4.059827e-60 | -8.615850e-47 |
| Msa0817120 | Msa1432130 | 0.827762 | 1.308224e-54 | -8.615850e-47 |
| Msa0817120 | Msa1436600 | 0.822174 | 2.727687e-53 | -8.615850e-47 |
| Msa0817120 | Msa1437130 | 0.804307 | 2.300295e-49 | -8.615850e-47 |
| Msa0817120 | Msa1437210 | 0.805229 | 1.476677e-49 | -8.615850e-47 |
| Msa0817120 | Msa1437330 | 0.800584 | 1.345576e-48 | -8.615850e-47 |
| Msa0817120 | Msa1442790 | 0.807386 | 5.184932e-50 | -8.615850e-47 |
| Msa0817120 | Msa1443610 | 0.803696 | 3.082500e-49 | -8.615850e-47 |
| Msa0817120 | Msa1444120 | 0.831046 | 2.084176e-55 | -8.615850e-47 |
| Msa0817120 | Msa1447890 | 0.808384 | 3.180921e-50 | -8.615850e-47 |
| Msa0817120 | Msa1448490 | 0.803671 | 3.119265e-49 | -8.615850e-47 |
| Msa0817120 | Msa1454960 | 0.814098 | 1.831729e-51 | -8.615850e-47 |
| Msa0817120 | Msa1458610 | 0.800413 | 1.458389e-48 | -8.615850e-47 |
| Msa0817120 | Msa1458810 | 0.800322 | 1.521572e-48 | -8.615850e-47 |
| Msa0817120 | Msa1462290 | 0.806265 | 8.947746e-50 | -8.615850e-47 |
| Msa0817120 | Msa1463600 | 0.845568 | 3.743931e-59 | -8.615850e-47 |
| Msa0124550 | Msa0817120 | 0.803312 | 3.702388e-49 | -8.615850e-47 |
| Msa0127850 | Msa0817120 | 0.826959 | 2.037225e-54 | -8.615850e-47 |
| Msa0137870 | Msa0817120 | 0.801704 | 7.942496e-49 | -8.615850e-47 |
| Msa0138020 | Msa0817120 | 0.806551 | 7.787897e-50 | -8.615850e-47 |
| Msa0138210 | Msa0817120 | 0.811853 | 5.687203e-51 | -8.615850e-47 |
| Msa0139670 | Msa0817120 | 0.806595 | 7.622807e-50 | -8.615850e-47 |
| Msa0142500 | Msa0817120 | 0.862947 | 3.532618e-64 | -8.615850e-47 |
| Msa0145740 | Msa0817120 | 0.805648 | 1.206361e-49 | -8.615850e-47 |
| Msa0146080 | Msa0817120 | 0.835552 | 1.570191e-56 | -8.615850e-47 |
| Msa0150260 | Msa0817120 | 0.807795 | 4.244440e-50 | -8.615850e-47 |
| Msa0154920 | Msa0817120 | 0.825423 | 4.724919e-54 | -8.615850e-47 |
| Msa0157100 | Msa0817120 | 0.805136 | 1.544274e-49 | -8.615850e-47 |
| Msa0160960 | Msa0817120 | 0.800533 | 1.378485e-48 | -8.615850e-47 |
| Msa0167980 | Msa0817120 | 0.813983 | 1.941333e-51 | -8.615850e-47 |
| Msa0174000 | Msa0817120 | 0.811289 | 7.543511e-51 | -8.615850e-47 |
| Msa0175540 | Msa0817120 | 0.822538 | 2.245969e-53 | -8.615850e-47 |
| Msa0176330 | Msa0817120 | 0.806741 | 7.099984e-50 | -8.615850e-47 |
| Msa0178510 | Msa0817120 | 0.804893 | 1.735810e-49 | -8.615850e-47 |
| Msa0183420 | Msa0817120 | 0.807887 | 4.057584e-50 | -8.615850e-47 |
| Msa0183870 | Msa0817120 | 0.835020 | 2.138932e-56 | -8.615850e-47 |
| Msa0187490 | Msa0817120 | 0.831785 | 1.370688e-55 | -8.615850e-47 |
| Msa0191070 | Msa0817120 | 0.809179 | 2.150818e-50 | -8.615850e-47 |
| Msa0202410 | Msa0817120 | 0.805479 | 1.308994e-49 | -8.615850e-47 |
| Msa0210260 | Msa0817120 | 0.828771 | 7.471083e-55 | -8.615850e-47 |
| Msa0223330 | Msa0817120 | 0.800753 | 1.243009e-48 | -8.615850e-47 |
| Msa0224030 | Msa0817120 | 0.800491 | 1.405755e-48 | -8.615850e-47 |
| Msa0225220 | Msa0817120 | 0.805587 | 1.242256e-49 | -8.615850e-47 |
| Msa0233370 | Msa0817120 | 0.834436 | 3.000900e-56 | -8.615850e-47 |
| Msa0237200 | Msa0817120 | 0.809860 | 1.535528e-50 | -8.615850e-47 |
| Msa0376020 | Msa0817120 | 0.807373 | 5.216921e-50 | -8.615850e-47 |
| Msa0376600 | Msa0817120 | 0.816789 | 4.614239e-52 | -8.615850e-47 |
| Msa0376910 | Msa0817120 | 0.815736 | 7.936259e-52 | -8.615850e-47 |
| Msa0378970 | Msa0817120 | 0.807629 | 4.604151e-50 | -8.615850e-47 |
| Msa0382310 | Msa0817120 | 0.802008 | 6.878456e-49 | -8.615850e-47 |
| Msa0382370 | Msa0817120 | 0.815601 | 8.504047e-52 | -8.615850e-47 |
| Msa0385490 | Msa0817120 | 0.817023 | 4.087890e-52 | -8.615850e-47 |
| Msa0387050 | Msa0817120 | 0.831696 | 1.442095e-55 | -8.615850e-47 |
| Msa0392270 | Msa0817120 | 0.837428 | 5.229044e-57 | -8.615850e-47 |
| Msa0395980 | Msa0817120 | 0.810525 | 1.103717e-50 | -8.615850e-47 |
| Msa0403490 | Msa0817120 | 0.811926 | 5.482599e-51 | -8.615850e-47 |
| Msa0422180 | Msa0817120 | 0.819347 | 1.217903e-52 | -8.615850e-47 |
| Msa0427580 | Msa0817120 | 0.805969 | 1.032824e-49 | -8.615850e-47 |
| Msa0431210 | Msa0817120 | 0.809458 | 1.873363e-50 | -8.615850e-47 |
| Msa0432160 | Msa0817120 | 0.814031 | 1.894704e-51 | -8.615850e-47 |
| Msa0432500 | Msa0817120 | 0.830260 | 3.246655e-55 | -8.615850e-47 |
| Msa0433400 | Msa0817120 | 0.807775 | 4.286655e-50 | -8.615850e-47 |
| Msa0439890 | Msa0817120 | 0.831137 | 1.979970e-55 | -8.615850e-47 |
| Msa0443430 | Msa0817120 | 0.827666 | 1.379381e-54 | -8.615850e-47 |
| Msa0468320 | Msa0817120 | 0.813205 | 2.879994e-51 | -8.615850e-47 |
| Msa0472960 | Msa0817120 | -0.803366 | 3.607963e-49 | -8.615850e-47 |
| Msa0476680 | Msa0817120 | 0.816121 | 6.509860e-52 | -8.615850e-47 |
| Msa0480780 | Msa0817120 | 0.810278 | 1.247831e-50 | -8.615850e-47 |
| Msa0481030 | Msa0817120 | 0.801019 | 1.096949e-48 | -8.615850e-47 |
| Msa0481280 | Msa0817120 | 0.801010 | 1.101511e-48 | -8.615850e-47 |
| Msa0482040 | Msa0817120 | 0.805560 | 1.258235e-49 | -8.615850e-47 |
| Msa0482180 | Msa0817120 | 0.821804 | 3.322850e-53 | -8.615850e-47 |
| Msa0241140 | Msa0817120 | 0.802904 | 4.496868e-49 | -8.615850e-47 |
| Msa0244980 | Msa0817120 | 0.826892 | 2.113484e-54 | -8.615850e-47 |
| Msa0245430 | Msa0817120 | 0.802827 | 4.664267e-49 | -8.615850e-47 |
| Msa0257500 | Msa0817120 | 0.800097 | 1.691103e-48 | -8.615850e-47 |
| Msa0261720 | Msa0817120 | 0.805147 | 1.535828e-49 | -8.615850e-47 |
| Msa0262370 | Msa0817120 | 0.826286 | 2.948018e-54 | -8.615850e-47 |
| Msa0264530 | Msa0817120 | 0.802848 | 4.617405e-49 | -8.615850e-47 |
| Msa0265600 | Msa0817120 | 0.812139 | 4.926991e-51 | -8.615850e-47 |
| Msa0271360 | Msa0817120 | 0.813995 | 1.929873e-51 | -8.615850e-47 |
| Msa0271790 | Msa0817120 | 0.823257 | 1.527101e-53 | -8.615850e-47 |
| Msa0274970 | Msa0817120 | 0.803001 | 4.294013e-49 | -8.615850e-47 |
| Msa0281480 | Msa0817120 | 0.814930 | 1.198565e-51 | -8.615850e-47 |
| Msa0283420 | Msa0817120 | 0.812647 | 3.816677e-51 | -8.615850e-47 |
| Msa0284450 | Msa0817120 | 0.806879 | 6.636996e-50 | -8.615850e-47 |
| Msa0285330 | Msa0817120 | 0.802580 | 5.244918e-49 | -8.615850e-47 |
| Msa0286670 | Msa0817120 | 0.801610 | 8.302776e-49 | -8.615850e-47 |
| Msa0296790 | Msa0817120 | 0.801834 | 7.468048e-49 | -8.615850e-47 |
| Msa0296980 | Msa0817120 | -0.800646 | 1.307135e-48 | -8.615850e-47 |
| Msa0300150 | Msa0817120 | 0.821953 | 3.069708e-53 | -8.615850e-47 |
| Msa0303460 | Msa0817120 | 0.807936 | 3.961112e-50 | -8.615850e-47 |
| Msa0303520 | Msa0817120 | 0.801018 | 1.097600e-48 | -8.615850e-47 |
| Msa0304840 | Msa0817120 | 0.838067 | 3.584559e-57 | -8.615850e-47 |
| Msa0307560 | Msa0817120 | 0.812406 | 4.307901e-51 | -8.615850e-47 |
| Msa0307960 | Msa0817120 | 0.801593 | 8.368474e-49 | -8.615850e-47 |
| Msa0309880 | Msa0817120 | 0.812947 | 3.280260e-51 | -8.615850e-47 |
| Msa0310430 | Msa0817120 | 0.831349 | 1.755176e-55 | -8.615850e-47 |
| Msa0311720 | Msa0817120 | 0.804903 | 1.727686e-49 | -8.615850e-47 |
| Msa0313930 | Msa0817120 | 0.800661 | 1.297888e-48 | -8.615850e-47 |
| Msa0315680 | Msa0817120 | 0.802344 | 5.865256e-49 | -8.615850e-47 |
| Msa0317960 | Msa0817120 | 0.808532 | 2.956831e-50 | -8.615850e-47 |
| Msa0320610 | Msa0817120 | 0.808200 | 3.481468e-50 | -8.615850e-47 |
| Msa0321690 | Msa0817120 | 0.816251 | 6.089352e-52 | -8.615850e-47 |
| Msa0324240 | Msa0817120 | 0.826095 | 3.274060e-54 | -8.615850e-47 |
| Msa0337590 | Msa0817120 | 0.825412 | 4.754212e-54 | -8.615850e-47 |
| Msa0341230 | Msa0817120 | 0.837002 | 6.719738e-57 | -8.615850e-47 |
| Msa0342010 | Msa0817120 | 0.809201 | 2.126885e-50 | -8.615850e-47 |
| Msa0343190 | Msa0817120 | 0.817027 | 4.079907e-52 | -8.615850e-47 |
| Msa0347750 | Msa0817120 | 0.803691 | 3.089365e-49 | -8.615850e-47 |
| Msa0347950 | Msa0817120 | 0.820867 | 5.467092e-53 | -8.615850e-47 |
| Msa0347990 | Msa0817120 | 0.828842 | 7.178100e-55 | -8.615850e-47 |
| Msa0482940 | Msa0817120 | 0.825727 | 4.003564e-54 | -8.615850e-47 |
| Msa0489610 | Msa0817120 | 0.809999 | 1.433605e-50 | -8.615850e-47 |
| Msa0489660 | Msa0817120 | 0.850094 | 2.120410e-60 | -8.615850e-47 |
| Msa0491000 | Msa0817120 | 0.812906 | 3.348639e-51 | -8.615850e-47 |
| Msa0514610 | Msa0817120 | 0.804980 | 1.664946e-49 | -8.615850e-47 |
| Msa0516020 | Msa0817120 | 0.807281 | 5.456426e-50 | -8.615850e-47 |
| Msa0517090 | Msa0817120 | 0.821798 | 3.334463e-53 | -8.615850e-47 |
| Msa0518170 | Msa0817120 | 0.825286 | 5.092010e-54 | -8.615850e-47 |
| Msa0518380 | Msa0817120 | 0.802036 | 6.788812e-49 | -8.615850e-47 |
| Msa0518440 | Msa0817120 | 0.821876 | 3.198093e-53 | -8.615850e-47 |
| Msa0521010 | Msa0817120 | 0.813608 | 2.348536e-51 | -8.615850e-47 |
| Msa0527740 | Msa0817120 | 0.819068 | 1.410229e-52 | -8.615850e-47 |
| Msa0527910 | Msa0817120 | 0.803745 | 3.010404e-49 | -8.615850e-47 |
| Msa0532980 | Msa0817120 | 0.801738 | 7.813789e-49 | -8.615850e-47 |
| Msa0534410 | Msa0817120 | 0.806428 | 8.266491e-50 | -8.615850e-47 |
| Msa0537770 | Msa0817120 | 0.819895 | 9.132132e-53 | -8.615850e-47 |
| Msa0542560 | Msa0817120 | 0.801704 | 7.940387e-49 | -8.615850e-47 |
| Msa0560500 | Msa0817120 | 0.821494 | 3.918786e-53 | -8.615850e-47 |
| Msa0566350 | Msa0817120 | 0.828594 | 8.241804e-55 | -8.615850e-47 |
| Msa0566750 | Msa0817120 | 0.834121 | 3.599530e-56 | -8.615850e-47 |
| Msa0569780 | Msa0817120 | 0.815682 | 8.156167e-52 | -8.615850e-47 |
| Msa0587190 | Msa0817120 | 0.807948 | 3.938380e-50 | -8.615850e-47 |
| Msa0588090 | Msa0817120 | 0.802440 | 5.604850e-49 | -8.615850e-47 |
| Msa0588240 | Msa0817120 | 0.813681 | 2.263210e-51 | -8.615850e-47 |
| Msa0594200 | Msa0817120 | 0.808059 | 3.730173e-50 | -8.615850e-47 |
| Msa0600080 | Msa0817120 | 0.835454 | 1.662036e-56 | -8.615850e-47 |
| Msa0600450 | Msa0817120 | 0.840861 | 6.738413e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0817120 | MtrunA17_Chr5g0404751 | 91.026 | 78 | 7 | 0 | 1 | 78 | 1 | 78 | 4.46e-48 | 149 |
| Msa0817120 | MtrunA17_Chr2g0299021 | 48.276 | 58 | 30 | 0 | 21 | 78 | 71 | 128 | 8.46e-14 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0817120 | AT1G77370.1 | 56.338 | 71 | 31 | 0 | 8 | 78 | 9 | 79 | 5.28e-22 | 83.6 |
| Msa0817120 | AT1G77370.2 | 64.912 | 57 | 20 | 0 | 24 | 80 | 25 | 81 | 9.08e-22 | 84.0 |
| Msa0817120 | AT5G20500.1 | 40.278 | 72 | 43 | 0 | 7 | 78 | 6 | 77 | 1.90e-13 | 62.0 |
Find 30 sgRNAs with CRISPR-Local
Find 110 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCCATTCTCAAACAAAA+AGG | 0.217348 | 5_3:-51962437 | None:intergenic |
| ATTTCGTTGTCATTGTTAAT+TGG | 0.231844 | 5_3:+51964449 | Msa0817120:three_prime_UTR |
| AAATCAGTGTCGTGTCAAAT+TGG | 0.237203 | 5_3:+51962308 | Msa0817120:five_prime_UTR |
| ATTTGACATTGGTTCTTTGT+AGG | 0.328186 | 5_3:-51964646 | None:intergenic |
| GACACGCGTGGAAAACAATA+AGG | 0.342799 | 5_3:+51962268 | None:intergenic |
| TACGTACGGGCAATAGGATT+TGG | 0.352701 | 5_3:-51962527 | None:intergenic |
| TATATATACGTACGGGCAAT+AGG | 0.386425 | 5_3:-51962533 | None:intergenic |
| GGAAACTGAATTTGAAGCTT+CGG | 0.429054 | 5_3:-51962458 | None:intergenic |
| AATCAGTGTCGTGTCAAATT+GGG | 0.440854 | 5_3:+51962309 | Msa0817120:five_prime_UTR |
| AGCAGTGGAGCTCTAATTGT+TGG | 0.456983 | 5_3:+51964421 | Msa0817120:three_prime_UTR |
| AACAGAACTATTCTATTCAA+TGG | 0.462801 | 5_3:-51964691 | None:intergenic |
| ATCTATAATTTGTATGAATG+TGG | 0.490361 | 5_3:+51964224 | Msa0817120:three_prime_UTR |
| TCTATAATTTGTATGAATGT+GGG | 0.491540 | 5_3:+51964225 | Msa0817120:three_prime_UTR |
| ATTGAATCTATCTCAAGTAA+TGG | 0.497398 | 5_3:+51964594 | Msa0817120:three_prime_UTR |
| CGTGGAAAACAATAAGGGTC+TGG | 0.507148 | 5_3:+51962274 | None:intergenic |
| GGAGAAGATGGTGATTCTGT+TGG | 0.515760 | 5_3:-51962506 | None:intergenic |
| GCAATAGGATTTGGAGAAGA+TGG | 0.516584 | 5_3:-51962518 | None:intergenic |
| AATCAAAGAAGTAAAACTAC+AGG | 0.537670 | 5_3:+51964623 | Msa0817120:three_prime_UTR |
| ACACGCGTGGAAAACAATAA+GGG | 0.548482 | 5_3:+51962269 | None:intergenic |
| GTTTCTGCAATTCACCACTC+TGG | 0.562376 | 5_3:-51964155 | None:intergenic |
| AAGACAAGACAATTTGACAT+TGG | 0.563313 | 5_3:-51964657 | None:intergenic |
| GATTCAATGAAACAATACTC+TGG | 0.570833 | 5_3:-51964579 | None:intergenic |
| CTTCGATATACATGAAAATG+CGG | 0.575457 | 5_3:-51964252 | None:intergenic |
| CTATAATTTGTATGAATGTG+GGG | 0.594049 | 5_3:+51964226 | Msa0817120:three_prime_UTR |
| TTCGATATACATGAAAATGC+GGG | 0.595061 | 5_3:-51964251 | None:intergenic |
| CGAAGGTTTCAAGCTTCTAG+CGG | 0.615435 | 5_3:+51964270 | Msa0817120:three_prime_UTR |
| TGATTGTATGCTTGAGACTG+AGG | 0.642233 | 5_3:+51964192 | Msa0817120:CDS |
| GAAAGTACGATCATGAGCAG+TGG | 0.651793 | 5_3:+51964406 | Msa0817120:three_prime_UTR |
| GAAGAATGAAGATGTTACAG+TGG | 0.663384 | 5_3:+51962377 | Msa0817120:exon |
| CTCAGTGCTGCAGTCCAGAG+TGG | 0.673667 | 5_3:+51964141 | Msa0817120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTATTGTATTTATTTTTTA+TGG | - | chr5_3:51964743-51964762 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAACTGCTTTAA+TGG | + | chr5_3:51963065-51963084 | Msa0817120:intron | 15.0% |
| !!! | AAGGGAATATTTATTATTTT+CGG | - | chr5_3:51963881-51963900 | None:intergenic | 15.0% |
| !!! | TATTTAGCTTTTAAAGTATA+TGG | - | chr5_3:51963982-51964001 | None:intergenic | 15.0% |
| !! | TATCTATATGTCATTATAAA+AGG | + | chr5_3:51964054-51964073 | Msa0817120:intron | 15.0% |
| !!! | AATACTTTTTCATGTTTTTT+AGG | + | chr5_3:51964296-51964315 | Msa0817120:three_prime_UTR | 15.0% |
| !!! | ATTAAGTTGTTTATCAAACA+AGG | - | chr5_3:51962754-51962773 | None:intergenic | 20.0% |
| !!! | TTAAGTTGTTTATACAAACA+AGG | - | chr5_3:51963467-51963486 | None:intergenic | 20.0% |
| !! | TCATATAGTTTAAGAACTAA+AGG | - | chr5_3:51963741-51963760 | None:intergenic | 20.0% |
| !! | TAAACTATATGAAAATAACG+AGG | + | chr5_3:51963749-51963768 | Msa0817120:intron | 20.0% |
| !!! | CTTATATTTTTGGATATAGA+GGG | - | chr5_3:51963803-51963822 | None:intergenic | 20.0% |
| !! | CTCTATATCCAAAAATATAA+GGG | + | chr5_3:51963802-51963821 | Msa0817120:intron | 20.0% |
| !!! | TGATAGAATTTTTTTATGAG+AGG | + | chr5_3:51963847-51963866 | Msa0817120:intron | 20.0% |
| !!! | ATACTTTAAAAGCTAAATAG+AGG | + | chr5_3:51963983-51964002 | Msa0817120:intron | 20.0% |
| !! | TATGTCATTATAAAAGGTTA+AGG | + | chr5_3:51964060-51964079 | Msa0817120:intron | 20.0% |
| !!! | ATCTATAATTTGTATGAATG+TGG | + | chr5_3:51964224-51964243 | Msa0817120:three_prime_UTR | 20.0% |
| !!! | TCTATAATTTGTATGAATGT+GGG | + | chr5_3:51964225-51964244 | Msa0817120:three_prime_UTR | 20.0% |
| !!! | ATGTTTTTTAGGTATTTACT+AGG | + | chr5_3:51964307-51964326 | Msa0817120:three_prime_UTR | 20.0% |
| !!! | ATGTTTTCATTTTGTTCTAT+AGG | + | chr5_3:51964384-51964403 | Msa0817120:three_prime_UTR | 20.0% |
| !!! | AATTGTAGTTTTCAATAATC+TGG | + | chr5_3:51964477-51964496 | Msa0817120:three_prime_UTR | 20.0% |
| ! | AAGAGAGTTATATATACGTA+CGG | - | chr5_3:51962544-51962563 | None:intergenic | 25.0% |
| ! | TTCAATTATTATCACGTGTT+AGG | + | chr5_3:51962569-51962588 | Msa0817120:intron | 25.0% |
| ! | TCAATTATTATCACGTGTTA+GGG | + | chr5_3:51962570-51962589 | Msa0817120:intron | 25.0% |
| ! | GTTTAATTAATATGCTCTGT+CGG | + | chr5_3:51962807-51962826 | Msa0817120:intron | 25.0% |
| ! | GTTGTGATATTCATCAATTA+AGG | - | chr5_3:51962868-51962887 | None:intergenic | 25.0% |
| ! | ATTCAAATAGTATACTCAGT+CGG | - | chr5_3:51962946-51962965 | None:intergenic | 25.0% |
| ! | GAAATAACCTATACATAAGA+GGG | - | chr5_3:51962982-51963001 | None:intergenic | 25.0% |
| ! | AGAAATAACCTATACATAAG+AGG | - | chr5_3:51962983-51963002 | None:intergenic | 25.0% |
| !! | TTTTCATAAGTGTTTATGTC+AGG | + | chr5_3:51963150-51963169 | Msa0817120:intron | 25.0% |
| ! | AATGATAACAGTTGTCTATT+TGG | - | chr5_3:51963198-51963217 | None:intergenic | 25.0% |
| ! | TATGAAAATAACGAGGAATT+TGG | + | chr5_3:51963756-51963775 | Msa0817120:intron | 25.0% |
| !!! | CCTTATATTTTTGGATATAG+AGG | - | chr5_3:51963804-51963823 | None:intergenic | 25.0% |
| ! | CCTCTATATCCAAAAATATA+AGG | + | chr5_3:51963801-51963820 | Msa0817120:intron | 25.0% |
| !! | ACAAATTTTCACATACTCAA+GGG | - | chr5_3:51963899-51963918 | None:intergenic | 25.0% |
| ! | TAATGAAGGGATTAAATTGA+AGG | + | chr5_3:51964015-51964034 | Msa0817120:intron | 25.0% |
| !! | CTATAATTTGTATGAATGTG+GGG | + | chr5_3:51964226-51964245 | Msa0817120:three_prime_UTR | 25.0% |
| ! | ATTTCGTTGTCATTGTTAAT+TGG | + | chr5_3:51964449-51964468 | Msa0817120:three_prime_UTR | 25.0% |
| ! | ATTGAATCTATCTCAAGTAA+TGG | + | chr5_3:51964594-51964613 | Msa0817120:three_prime_UTR | 25.0% |
| ! | AATCAAAGAAGTAAAACTAC+AGG | + | chr5_3:51964623-51964642 | Msa0817120:three_prime_UTR | 25.0% |
| ! | AACAGAACTATTCTATTCAA+TGG | - | chr5_3:51964694-51964713 | None:intergenic | 25.0% |
| !!! | TGTTTTTGTACCAAACAAAA+TGG | + | chr5_3:51964710-51964729 | Msa0817120:three_prime_UTR | 25.0% |
| CTCAAACAAAAAGGGTAAAA+CGG | - | chr5_3:51962431-51962450 | None:intergenic | 30.0% | |
| !! | TTACCCTTTTTGTTTGAGAA+TGG | + | chr5_3:51962433-51962452 | Msa0817120:CDS | 30.0% |
| GTTCCATTCTCAAACAAAAA+GGG | - | chr5_3:51962439-51962458 | None:intergenic | 30.0% | |
| AGAGAGTTATATATACGTAC+GGG | - | chr5_3:51962543-51962562 | None:intergenic | 30.0% | |
| ! | AATGTTTCTCTGATTTTCGT+AGG | + | chr5_3:51962611-51962630 | Msa0817120:intron | 30.0% |
| AAATCAAGCTCAACAACAAA+AGG | - | chr5_3:51962682-51962701 | None:intergenic | 30.0% | |
| TAACAGTTGTCTATTTGGAT+TGG | - | chr5_3:51963193-51963212 | None:intergenic | 30.0% | |
| ! | TTTTGTGCTTGTTTAGATGA+TGG | + | chr5_3:51963249-51963268 | Msa0817120:intron | 30.0% |
| TTTGTGCTTGTTTAGATGAT+GGG | + | chr5_3:51963250-51963269 | Msa0817120:intron | 30.0% | |
| !! | TTCTTAGACTTTTGCTTTTC+TGG | + | chr5_3:51963376-51963395 | Msa0817120:intron | 30.0% |
| !! | TCTTAGACTTTTGCTTTTCT+GGG | + | chr5_3:51963377-51963396 | Msa0817120:intron | 30.0% |
| ! | TTCTCTCACCCTTATATTTT+TGG | - | chr5_3:51963813-51963832 | None:intergenic | 30.0% |
| ! | GACAAATTTTCACATACTCA+AGG | - | chr5_3:51963900-51963919 | None:intergenic | 30.0% |
| CATTAGTACTTAAGATGCTA+GGG | - | chr5_3:51963931-51963950 | None:intergenic | 30.0% | |
| TCATTAGTACTTAAGATGCT+AGG | - | chr5_3:51963932-51963951 | None:intergenic | 30.0% | |
| TCTTAAGTACTAATGAGACA+AGG | + | chr5_3:51963936-51963955 | Msa0817120:intron | 30.0% | |
| CTTAAGTACTAATGAGACAA+GGG | + | chr5_3:51963937-51963956 | Msa0817120:intron | 30.0% | |
| TTAAGTACTAATGAGACAAG+GGG | + | chr5_3:51963938-51963957 | Msa0817120:intron | 30.0% | |
| ! | AGAGGAGATAATGATAATGA+AGG | + | chr5_3:51964001-51964020 | Msa0817120:intron | 30.0% |
| ! | GAGGAGATAATGATAATGAA+GGG | + | chr5_3:51964002-51964021 | Msa0817120:intron | 30.0% |
| ATGAGCAAACTTTGTAAGAA+TGG | - | chr5_3:51964107-51964126 | None:intergenic | 30.0% | |
| TTCGATATACATGAAAATGC+GGG | - | chr5_3:51964254-51964273 | None:intergenic | 30.0% | |
| CTTCGATATACATGAAAATG+CGG | - | chr5_3:51964255-51964274 | None:intergenic | 30.0% | |
| GATTCAATGAAACAATACTC+TGG | - | chr5_3:51964582-51964601 | None:intergenic | 30.0% | |
| !! | ATTTGACATTGGTTCTTTGT+AGG | - | chr5_3:51964649-51964668 | None:intergenic | 30.0% |
| AAGACAAGACAATTTGACAT+TGG | - | chr5_3:51964660-51964679 | None:intergenic | 30.0% | |
| AAATCAGTGTCGTGTCAAAT+TGG | + | chr5_3:51962308-51962327 | Msa0817120:five_prime_UTR | 35.0% | |
| AATCAGTGTCGTGTCAAATT+GGG | + | chr5_3:51962309-51962328 | Msa0817120:five_prime_UTR | 35.0% | |
| GAAGAATGAAGATGTTACAG+TGG | + | chr5_3:51962377-51962396 | Msa0817120:exon | 35.0% | |
| GGTTCCATTCTCAAACAAAA+AGG | - | chr5_3:51962440-51962459 | None:intergenic | 35.0% | |
| ! | GGAAACTGAATTTGAAGCTT+CGG | - | chr5_3:51962461-51962480 | None:intergenic | 35.0% |
| !! | GATTGCGTTTTGAACAAAAG+CGG | - | chr5_3:51962482-51962501 | None:intergenic | 35.0% |
| TATATATACGTACGGGCAAT+AGG | - | chr5_3:51962536-51962555 | None:intergenic | 35.0% | |
| TAAGGAGACAACACAATCAT+CGG | - | chr5_3:51962850-51962869 | None:intergenic | 35.0% | |
| ! | ATTGTTTTCGCGTAAGCTAT+AGG | + | chr5_3:51963017-51963036 | Msa0817120:intron | 35.0% |
| !! | AGATGATGGGTATCAAATTC+AGG | + | chr5_3:51963263-51963282 | Msa0817120:intron | 35.0% |
| !! | GATGATGGGTATCAAATTCA+GGG | + | chr5_3:51963264-51963283 | Msa0817120:intron | 35.0% |
| ! | TTTGTCTATGGGAAGCATAT+TGG | + | chr5_3:51963330-51963349 | Msa0817120:intron | 35.0% |
| ATATAAGGGTGAGAGAAGAT+AGG | + | chr5_3:51963816-51963835 | Msa0817120:intron | 35.0% | |
| TATAAGGGTGAGAGAAGATA+GGG | + | chr5_3:51963817-51963836 | Msa0817120:intron | 35.0% | |
| TTAAGATGCTAGGGATTAAC+AGG | - | chr5_3:51963922-51963941 | None:intergenic | 35.0% | |
| TGGATAGAGAAACACAAAGA+GGG | - | chr5_3:51964087-51964106 | None:intergenic | 35.0% | |
| ATGGATAGAGAAACACAAAG+AGG | - | chr5_3:51964088-51964107 | None:intergenic | 35.0% | |
| ! | CGCATTTTCATGTATATCGA+AGG | + | chr5_3:51964253-51964272 | Msa0817120:three_prime_UTR | 35.0% |
| !!! | ACATGTACTTTTAGCTTGTC+TGG | + | chr5_3:51964336-51964355 | Msa0817120:three_prime_UTR | 35.0% |
| !! | TGGTACAAAGCCATTTTGTT+TGG | - | chr5_3:51964723-51964742 | None:intergenic | 35.0% |
| GCAATAGGATTTGGAGAAGA+TGG | - | chr5_3:51962521-51962540 | None:intergenic | 40.0% | |
| !! | CCTATACATAAGAGGGTATC+AGG | - | chr5_3:51962975-51962994 | None:intergenic | 40.0% |
| CCTGATACCCTCTTATGTAT+AGG | + | chr5_3:51962972-51962991 | Msa0817120:intron | 40.0% | |
| ACTGCTTTAATGGTCTGTCT+TGG | + | chr5_3:51963075-51963094 | Msa0817120:intron | 40.0% | |
| ! | TCAAATTCAGGGTGTTCTTC+TGG | + | chr5_3:51963275-51963294 | Msa0817120:intron | 40.0% |
| GGTGTTCTTCTGGATTTGAT+TGG | + | chr5_3:51963285-51963304 | Msa0817120:intron | 40.0% | |
| TCCCACAAGTGTTTGTCTAT+GGG | + | chr5_3:51963319-51963338 | Msa0817120:intron | 40.0% | |
| TCCCATAGACAAACACTTGT+GGG | - | chr5_3:51963323-51963342 | None:intergenic | 40.0% | |
| TTCCCATAGACAAACACTTG+TGG | - | chr5_3:51963324-51963343 | None:intergenic | 40.0% | |
| ! | AAGCATATTGGTGGATCAGA+TGG | + | chr5_3:51963342-51963361 | Msa0817120:intron | 40.0% |
| TGATTGTATGCTTGAGACTG+AGG | + | chr5_3:51964192-51964211 | Msa0817120:CDS | 40.0% | |
| GGAGAAGATGGTGATTCTGT+TGG | - | chr5_3:51962509-51962528 | None:intergenic | 45.0% | |
| TACGTACGGGCAATAGGATT+TGG | - | chr5_3:51962530-51962549 | None:intergenic | 45.0% | |
| !! | GTTGTTGAGCTTGATTTGCG+AGG | + | chr5_3:51962685-51962704 | Msa0817120:intron | 45.0% |
| GTCCCACAAGTGTTTGTCTA+TGG | + | chr5_3:51963318-51963337 | Msa0817120:intron | 45.0% | |
| ! | GTCTATGGGAAGCATATTGG+TGG | + | chr5_3:51963333-51963352 | Msa0817120:intron | 45.0% |
| AGGGATGCATGTTTGAGAGA+GGG | - | chr5_3:51963784-51963803 | None:intergenic | 45.0% | |
| GTTTCTGCAATTCACCACTC+TGG | - | chr5_3:51964158-51964177 | None:intergenic | 45.0% | |
| CGAAGGTTTCAAGCTTCTAG+CGG | + | chr5_3:51964270-51964289 | Msa0817120:three_prime_UTR | 45.0% | |
| ! | GAAAGTACGATCATGAGCAG+TGG | + | chr5_3:51964406-51964425 | Msa0817120:three_prime_UTR | 45.0% |
| ! | AGCAGTGGAGCTCTAATTGT+TGG | + | chr5_3:51964421-51964440 | Msa0817120:three_prime_UTR | 45.0% |
| GAGGGATGCATGTTTGAGAG+AGG | - | chr5_3:51963785-51963804 | None:intergenic | 50.0% | |
| CTCAGTGCTGCAGTCCAGAG+TGG | + | chr5_3:51964141-51964160 | Msa0817120:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 51962280 | 51964784 | 51962280 | ID=Msa0817120;Name=Msa0817120 |
| chr5_3 | mRNA | 51962280 | 51964784 | 51962280 | ID=Msa0817120-mRNA-1;Parent=Msa0817120;Name=Msa0817120-mRNA-1;_AED=0.21;_eAED=0.21;_QI=102|0.5|0.66|1|0|0.66|3|562|98 |
| chr5_3 | exon | 51962280 | 51962542 | 51962280 | ID=Msa0817120-mRNA-1:exon:15606;Parent=Msa0817120-mRNA-1 |
| chr5_3 | exon | 51962633 | 51962684 | 51962633 | ID=Msa0817120-mRNA-1:exon:15607;Parent=Msa0817120-mRNA-1 |
| chr5_3 | exon | 51964139 | 51964784 | 51964139 | ID=Msa0817120-mRNA-1:exon:15608;Parent=Msa0817120-mRNA-1 |
| chr5_3 | five_prime_UTR | 51962280 | 51962381 | 51962280 | ID=Msa0817120-mRNA-1:five_prime_utr;Parent=Msa0817120-mRNA-1 |
| chr5_3 | CDS | 51962382 | 51962542 | 51962382 | ID=Msa0817120-mRNA-1:cds;Parent=Msa0817120-mRNA-1 |
| chr5_3 | CDS | 51962633 | 51962684 | 51962633 | ID=Msa0817120-mRNA-1:cds;Parent=Msa0817120-mRNA-1 |
| chr5_3 | CDS | 51964139 | 51964222 | 51964139 | ID=Msa0817120-mRNA-1:cds;Parent=Msa0817120-mRNA-1 |
| chr5_3 | three_prime_UTR | 51964223 | 51964784 | 51964223 | ID=Msa0817120-mRNA-1:three_prime_utr;Parent=Msa0817120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
