AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1408750


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1408750 MtrunA17_Chr8g0337211 97.849 372 7 1 93 464 29 399 0.0 751
Msa1408750 MtrunA17_Chr8g0337211 95.918 98 2 2 1 97 1 97 2.60e-52 181
Msa1408750 MtrunA17_Chr4g0054901 80.337 356 60 4 97 452 53 398 0.0 578
Msa1408750 MtrunA17_Chr3g0096511 26.168 321 208 14 144 444 8 319 1.62e-13 71.2
Msa1408750 MtrunA17_Chr5g0432811 26.752 314 201 14 144 437 8 312 3.37e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1408750 AT2G44530.1 91.239 331 26 2 136 464 65 394 0.0 624
Msa1408750 AT2G44530.2 91.239 331 26 2 136 464 64 393 0.0 624
Msa1408750 AT1G32380.1 84.242 330 47 3 125 452 68 394 0.0 578
Msa1408750 AT2G35390.4 80.966 352 57 4 103 452 3 346 0.0 576
Msa1408750 AT2G35390.1 80.966 352 57 4 103 452 3 346 0.0 576
Msa1408750 AT2G35390.2 80.966 352 57 4 103 452 54 397 0.0 576
Msa1408750 AT1G32380.2 89.895 287 28 1 166 452 1 286 0.0 540
Msa1408750 AT2G35390.3 79.866 298 50 4 103 398 54 343 1.25e-166 473
Msa1408750 AT1G10700.1 25.392 319 210 14 106 406 54 362 1.05e-13 73.2

Find 106 sgRNAs with CRISPR-Local

Find 787 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGCAGTCATTCCATATTT+TGG 0.133514 tig0023416:-4242 Msa1408750:CDS
ATAGGAAATTGCATGTTATA+TGG 0.209711 tig0023416:-4450 Msa1408750:intron
CCTCCACTCTGGGCAGTCTA+TGG 0.245181 tig0023416:-3257 Msa1408750:CDS
CTACTGATAAGACAGTTAAT+TGG 0.262391 tig0023416:+753 None:intergenic
GCTCTAGCATATCCAAAATA+TGG 0.280293 tig0023416:+4230 None:intergenic
ATGTTATATGGGCCTGGATC+TGG 0.313034 tig0023416:-4438 Msa1408750:CDS
ATCTGAACAAATAGTCTTGC+TGG 0.323128 tig0023416:+2758 None:intergenic
TACTGATAAGACAGTTAATT+GGG 0.362406 tig0023416:+754 None:intergenic
CTTATCAGTAGCAAACCTTC+TGG 0.366216 tig0023416:-741 Msa1408750:CDS
AATTTGATTGGTGATGTAAA+AGG 0.370527 tig0023416:-2463 Msa1408750:CDS
TCAACTGAATATTCAGTTAC+CGG 0.386620 tig0023416:-12809 Msa1408750:CDS
TCAACTGAATATTCAGTTAC+CGG 0.386620 tig0023416:-8725 Msa1408750:CDS
TCCAACTGCAAGAGAGTGTC+AGG 0.388820 tig0023416:-4373 Msa1408750:CDS
CTAAATTCGGAAGGAGGATT+AGG 0.393019 tig0023416:+13102 None:intergenic
TGTAGTACAATCTGTCAATC+TGG 0.401957 tig0023416:-12852 Msa1408750:CDS
TGTAGTACAATCTGTCAATC+TGG 0.401957 tig0023416:-8768 Msa1408750:CDS
CTTGCATGTGACCTCCACTC+TGG 0.408654 tig0023416:-3268 Msa1408750:CDS
GCAAGGTAATCGAGTATAAC+AGG 0.410223 tig0023416:+2780 None:intergenic
AGGGAGAAACGAGGAGTGAT+AGG 0.412888 tig0023416:+12987 None:intergenic
TAGGAAATTGCATGTTATAT+GGG 0.416483 tig0023416:-4449 Msa1408750:CDS
ACCTTCTGGGCGAGACCATA+TGG 0.425438 tig0023416:-727 Msa1408750:CDS
TCCCGCGAATGAGAATCTTA+TGG 0.430669 tig0023416:-4315 Msa1408750:CDS
AGATCATGAATACGAGTGTT+TGG 0.434509 tig0023416:+12752 None:intergenic
AGATCATGAATACGAGTGTT+TGG 0.434509 tig0023416:+8668 None:intergenic
TGTCCATACACATGATCAAC+TGG 0.436657 tig0023416:+3220 None:intergenic
GCAAATTTAATTACAGAAGC+TGG 0.437018 tig0023416:-3304 Msa1408750:CDS
AACAAATAGTCTTGCTGGCA+AGG 0.449627 tig0023416:+2763 None:intergenic
ATTCCAGTTGATCATGTGTA+TGG 0.449841 tig0023416:-3223 Msa1408750:CDS
CTAGCTACACCACCAACATC+TGG 0.450859 tig0023416:+2717 None:intergenic
GTAAACGGTTACGCTAAATT+CGG 0.464662 tig0023416:+13089 None:intergenic
TTGCATGTGACCTCCACTCT+GGG 0.471838 tig0023416:-3267 Msa1408750:CDS
GAAAGAAGATTGAAGTAGAG+TGG 0.474188 tig0023416:+13034 None:intergenic
TACCTGAGCGAGTGCGGGAT+TGG 0.477160 tig0023416:+12691 None:intergenic
TACCTGAGCGAGTGCGGGAT+TGG 0.477160 tig0023416:+8607 None:intergenic
TTGCAGGTGATGAATTTGAT+TGG 0.480553 tig0023416:-2475 Msa1408750:intron
CGACGGCGGCGGCGTTGCGG+AGG 0.486887 tig0023416:+12967 None:intergenic
TTATCAGTAGCAAACCTTCT+GGG 0.489700 tig0023416:-740 Msa1408750:CDS
CAATCTGTCAATCTGGAAAA+CGG 0.495351 tig0023416:-12845 Msa1408750:CDS
CAATCTGTCAATCTGGAAAA+CGG 0.495351 tig0023416:-8761 Msa1408750:CDS
CTGAGCGAGTGCGGGATTGG+CGG 0.495771 tig0023416:+12694 None:intergenic
CTGAGCGAGTGCGGGATTGG+CGG 0.495771 tig0023416:+8610 None:intergenic
ATGGCGTAACACTCAGTAAA+CGG 0.505357 tig0023416:+13074 None:intergenic
TTTGGCAGAAGCTCTCCTGC+AGG 0.516016 tig0023416:+4271 None:intergenic
AATTGCATGTTATATGGGCC+TGG 0.517043 tig0023416:-4444 Msa1408750:CDS
TGTTATATGGGCCTGGATCT+GGG 0.520595 tig0023416:-4437 Msa1408750:CDS
CCCTGACACTCTCTTGCAGT+TGG 0.525864 tig0023416:+4372 None:intergenic
TCCATAAGATTCTCATTCGC+GGG 0.527102 tig0023416:+4314 None:intergenic
CTCCATAAGATTCTCATTCG+CGG 0.529400 tig0023416:+4313 None:intergenic
CTTGACAATCTCTCTATAGC+AGG 0.530606 tig0023416:+839 None:intergenic
TCGTAATGATTGATGCCTGC+AGG 0.530985 tig0023416:-4286 Msa1408750:CDS
AAAAGGAAAGGTAGCAGTGA+TGG 0.532343 tig0023416:-2446 Msa1408750:CDS
CGACGACGGCGGCGGCGTTG+CGG 0.533290 tig0023416:+12964 None:intergenic
CAACTACTGTTTCAGACTCA+AGG 0.542966 tig0023416:-3355 Msa1408750:intron
AGTTGATCATGTGTATGGAC+AGG 0.543298 tig0023416:-3218 Msa1408750:intron
GACGGCGGCGGCGTTGCGGA+GGG 0.548828 tig0023416:+12968 None:intergenic
AAGTAGTTCTTCTCTGCTAG+TGG 0.549029 tig0023416:+779 None:intergenic
GATGATACCTGAGCGAGTGC+GGG 0.549570 tig0023416:+12686 None:intergenic
GATGATACCTGAGCGAGTGC+GGG 0.549570 tig0023416:+8602 None:intergenic
AATTCGGAAGGAGGATTAGG+TGG 0.549616 tig0023416:+13105 None:intergenic
ATTGTTGATAAAAGACGTCA+TGG 0.550483 tig0023416:-2651 Msa1408750:CDS
ATATGCTAGAGCTGATAGAA+AGG 0.559762 tig0023416:-4219 Msa1408750:intron
CGGAATTGAACTTGTACCAC+CGG 0.561435 tig0023416:+12790 None:intergenic
CGGAATTGAACTTGTACCAC+CGG 0.561435 tig0023416:+8706 None:intergenic
GGACATGATGAATGAATGAA+TGG 0.561934 tig0023416:+13055 None:intergenic
GATTGGTGATGTAAAAGGAA+AGG 0.565352 tig0023416:-2458 Msa1408750:CDS
TCATTCGCGGGAGGACATGT+AGG 0.571769 tig0023416:+4326 None:intergenic
GGATGATACCTGAGCGAGTG+CGG 0.580736 tig0023416:+12685 None:intergenic
GGATGATACCTGAGCGAGTG+CGG 0.580736 tig0023416:+8601 None:intergenic
AAAGAGCTGCTCCTTTGCGA+TGG 0.585610 tig0023416:+1309 None:intergenic
GCCATATGGTCTCGCCCAGA+AGG 0.586947 tig0023416:+726 None:intergenic
ATAGTTGTCTCGCCAGATGT+TGG 0.591097 tig0023416:-2729 Msa1408750:CDS
GTTACTTACGACGACGGCGG+CGG 0.591923 tig0023416:+12956 None:intergenic
GACAATCTCTCTATAGCAGG+AGG 0.595468 tig0023416:+842 None:intergenic
GATGACATGATTGATACTGC+TGG 0.599761 tig0023416:-2421 Msa1408750:CDS
GTTGTCTCGCCAGATGTTGG+TGG 0.603849 tig0023416:-2726 Msa1408750:CDS
GAATATTCAGTTGAACGGTA+CGG 0.605959 tig0023416:+12818 None:intergenic
GAATATTCAGTTGAACGGTA+CGG 0.605959 tig0023416:+8734 None:intergenic
TAACTGAATATTCAGTTGAA+CGG 0.606307 tig0023416:+12813 None:intergenic
TAACTGAATATTCAGTTGAA+CGG 0.606307 tig0023416:+8729 None:intergenic
TTCAATTCCGAGTTATCTAG+TGG 0.607893 tig0023416:-12777 Msa1408750:CDS
TTCAATTCCGAGTTATCTAG+TGG 0.607893 tig0023416:-8693 Msa1408750:CDS
TCTTATAGGGACCATCGCAA+AGG 0.611140 tig0023416:-1320 Msa1408750:intron
GTTACGCTAAATTCGGAAGG+AGG 0.612911 tig0023416:+13096 None:intergenic
AACTACTGTTTCAGACTCAA+GGG 0.616461 tig0023416:-3354 Msa1408750:intron
ATTCGGAAGGAGGATTAGGT+GGG 0.629840 tig0023416:+13106 None:intergenic
TTTGGCGCCACTAGATAACT+CGG 0.630034 tig0023416:+12770 None:intergenic
TTTGGCGCCACTAGATAACT+CGG 0.630034 tig0023416:+8686 None:intergenic
CCATAGACTGCCCAGAGTGG+AGG 0.638297 tig0023416:+3257 None:intergenic
ACGGTTACGCTAAATTCGGA+AGG 0.642915 tig0023416:+13093 None:intergenic
ACTGATAAGACAGTTAATTG+GGG 0.644887 tig0023416:+755 None:intergenic
AGCCCATAGACTGCCCAGAG+TGG 0.655210 tig0023416:+3254 None:intergenic
TCATGGGCATAATGTTGCCG+AGG 0.655448 tig0023416:-2634 Msa1408750:intron
TTGGACATATATCTCCCCAT+CGG 0.659494 tig0023416:+4391 None:intergenic
ATAAGATTCTCATTCGCGGG+AGG 0.659940 tig0023416:+4317 None:intergenic
ACAATCTCTCTATAGCAGGA+GGG 0.668556 tig0023416:+843 None:intergenic
CAACTGCAAGAGAGTGTCAG+GGG 0.669938 tig0023416:-4371 Msa1408750:CDS
CCAACTGCAAGAGAGTGTCA+GGG 0.672047 tig0023416:-4372 Msa1408750:CDS
ACTGAATATTCAGTTACCGG+TGG 0.679249 tig0023416:-12806 Msa1408750:CDS
ACTGAATATTCAGTTACCGG+TGG 0.679249 tig0023416:-8722 Msa1408750:CDS
CTGATAAGACAGTTAATTGG+GGG 0.686616 tig0023416:+756 None:intergenic
TTGTTGATAAAAGACGTCAT+GGG 0.699425 tig0023416:-2650 Msa1408750:CDS
GCTATAGAGAGATTGTCAAG+CGG 0.702672 tig0023416:-836 Msa1408750:CDS
GAGAGAGTTACTTACGACGA+CGG 0.708624 tig0023416:+12950 None:intergenic
AACTGCAAGAGAGTGTCAGG+GGG 0.717564 tig0023416:-4370 Msa1408750:CDS
AGAGTTACTTACGACGACGG+CGG 0.740080 tig0023416:+12953 None:intergenic
GCGTTGCGGAGGGAGAAACG+AGG 0.760496 tig0023416:+12978 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTGTTTGTTTTTT+GGG + tig0023416:2001-2020 None:intergenic 10.0%
!!! TTTTTTTTTTGTTTGTTTTT+TGG + tig0023416:2002-2021 None:intergenic 10.0%
!!! TTTTTTTTTGTTTGTTTTTT+GGG + tig0023416:2001-2020 None:intergenic 10.0%
!!! TTTTTTTTTTGTTTGTTTTT+TGG + tig0023416:2002-2021 None:intergenic 10.0%
!! ATAAAATTTCAAATATCATT+AGG + tig0023416:8612-8631 None:intergenic 10.0%
!!! TTATTTTTTTACAAAATACT+TGG - tig0023416:9465-9484 Msa1408750:intron 10.0%
!! TAATAATTTATTTCAATTTG+TGG - tig0023416:11923-11942 Msa1408750:intron 10.0%
!! ATTATATTGAGATGTAATAT+AGG - tig0023416:518-537 Msa1408750:intron 15.0%
!!! CTATTTAAAGATTTTCTAAT+AGG + tig0023416:1240-1259 None:intergenic 15.0%
!! TGTGATATTATCATAAATAA+TGG - tig0023416:3112-3131 Msa1408750:intron 15.0%
!! TTCTTTATAATTGTTATCAA+TGG + tig0023416:3278-3297 None:intergenic 15.0%
!! ACAATTATAAAGAAAATGTA+CGG - tig0023416:3284-3303 Msa1408750:CDS 15.0%
!! TAAATTGAGATGTAATATAT+TGG + tig0023416:4125-4144 None:intergenic 15.0%
!!! AGTTAACTTGATAATTTTTT+AGG - tig0023416:4192-4211 Msa1408750:intron 15.0%
!! TAATTAAGTGCTTATATTAT+AGG - tig0023416:4235-4254 Msa1408750:CDS 15.0%
!! ATTATATTGAGATGTAATAT+AGG - tig0023416:518-537 Msa1408750:intron 15.0%
!!! CTATTTAAAGATTTTCTAAT+AGG + tig0023416:1240-1259 None:intergenic 15.0%
!! TGTGATATTATCATAAATAA+TGG - tig0023416:3112-3131 Msa1408750:intron 15.0%
!! TTCTTTATAATTGTTATCAA+TGG + tig0023416:3278-3297 None:intergenic 15.0%
!! ACAATTATAAAGAAAATGTA+CGG - tig0023416:3284-3303 Msa1408750:CDS 15.0%
!! TAAATTGAGATGTAATATAT+TGG + tig0023416:4125-4144 None:intergenic 15.0%
!!! AGTTAACTTGATAATTTTTT+AGG - tig0023416:4192-4211 Msa1408750:intron 15.0%
!! TAATTAAGTGCTTATATTAT+AGG - tig0023416:4235-4254 Msa1408750:CDS 15.0%
!!! TTTGTTTTTCTCAAAAAAAA+AGG - tig0023416:9728-9747 Msa1408750:intron 15.0%
!! AAGAAAATCAGAAATTTAAA+GGG + tig0023416:10160-10179 None:intergenic 15.0%
!! ATATATATCATCAAGAAAAA+GGG + tig0023416:10998-11017 None:intergenic 15.0%
!! AATATATATCATCAAGAAAA+AGG + tig0023416:10999-11018 None:intergenic 15.0%
!!! GATATATATTATTTTTCTAC+AGG - tig0023416:11009-11028 Msa1408750:intron 15.0%
!! AAGACAAATATAATTCAATT+TGG + tig0023416:11267-11286 None:intergenic 15.0%
!!! ATTATCTTTAGCTAAAATTT+TGG - tig0023416:11677-11696 Msa1408750:intron 15.0%
!!! AAATTGTTAATTTGTCTTAT+AGG - tig0023416:11797-11816 Msa1408750:intron 15.0%
!!! AATTGTTAATTTGTCTTATA+GGG - tig0023416:11798-11817 Msa1408750:intron 15.0%
!!! TCAAATTATTAAAAGTGTCT+GGG + tig0023416:698-717 None:intergenic 20.0%
!! TTCATAGTAATTATATGTGT+CGG - tig0023416:731-750 Msa1408750:CDS 20.0%
!! TTTATCCTTATTATCGTATT+CGG + tig0023416:840-859 None:intergenic 20.0%
!! ACTTATGAACATAAACTTAT+AGG - tig0023416:996-1015 Msa1408750:intron 20.0%
!! AGAATAATAACTGATTAGAA+TGG - tig0023416:1147-1166 Msa1408750:intron 20.0%
!! GAGAATAATATAGAACATTA+TGG - tig0023416:1356-1375 Msa1408750:intron 20.0%
!! AAAATAAAGTCATAGTGATT+AGG - tig0023416:1416-1435 Msa1408750:intron 20.0%
!! TTATTTATACTACTCAAAGA+AGG + tig0023416:1564-1583 None:intergenic 20.0%
!! TTCTTTGAGTAGTATAAATA+AGG - tig0023416:1563-1582 Msa1408750:intron 20.0%
!!! ATCTTTTCATGAAATTGAAA+TGG - tig0023416:2069-2088 Msa1408750:intron 20.0%
!!! AAATTGGATTGATAATAATG+AGG + tig0023416:2511-2530 None:intergenic 20.0%
!! ATCATCATATATTGAATCTA+TGG + tig0023416:2894-2913 None:intergenic 20.0%
!! AAATGGTATATTGAACAATA+TGG - tig0023416:3144-3163 Msa1408750:intron 20.0%
!! GAGAATAATATAGAACATTA+TGG - tig0023416:1356-1375 Msa1408750:intron 20.0%
!! AAAATAAAGTCATAGTGATT+AGG - tig0023416:1416-1435 Msa1408750:intron 20.0%
!! TTATTTATACTACTCAAAGA+AGG + tig0023416:1564-1583 None:intergenic 20.0%
!! TTCTTTGAGTAGTATAAATA+AGG - tig0023416:1563-1582 Msa1408750:intron 20.0%
!!! TCAAATTATTAAAAGTGTCT+GGG + tig0023416:698-717 None:intergenic 20.0%
!! TTCATAGTAATTATATGTGT+CGG - tig0023416:731-750 Msa1408750:CDS 20.0%
!! TTTATCCTTATTATCGTATT+CGG + tig0023416:840-859 None:intergenic 20.0%
!! ACTTATGAACATAAACTTAT+AGG - tig0023416:996-1015 Msa1408750:intron 20.0%
!! AGAATAATAACTGATTAGAA+TGG - tig0023416:1147-1166 Msa1408750:intron 20.0%
!! GAGAATAATATAGAACATTA+TGG - tig0023416:1356-1375 Msa1408750:intron 20.0%
!! AAAATAAAGTCATAGTGATT+AGG - tig0023416:1416-1435 Msa1408750:intron 20.0%
!! TTATTTATACTACTCAAAGA+AGG + tig0023416:1564-1583 None:intergenic 20.0%
!! TTCTTTGAGTAGTATAAATA+AGG - tig0023416:1563-1582 Msa1408750:intron 20.0%
!!! ATCTTTTCATGAAATTGAAA+TGG - tig0023416:2069-2088 Msa1408750:intron 20.0%
!!! AAATTGGATTGATAATAATG+AGG + tig0023416:2511-2530 None:intergenic 20.0%
!! ATCATCATATATTGAATCTA+TGG + tig0023416:2894-2913 None:intergenic 20.0%
!! AAATGGTATATTGAACAATA+TGG - tig0023416:3144-3163 Msa1408750:intron 20.0%
!! GAGAATAATATAGAACATTA+TGG - tig0023416:1356-1375 Msa1408750:intron 20.0%
!! AAAATAAAGTCATAGTGATT+AGG - tig0023416:1416-1435 Msa1408750:intron 20.0%
!! TTATTTATACTACTCAAAGA+AGG + tig0023416:1564-1583 None:intergenic 20.0%
!! TTCTTTGAGTAGTATAAATA+AGG - tig0023416:1563-1582 Msa1408750:intron 20.0%
!!! TTATGTATAAGCTATTTCTA+TGG - tig0023416:8365-8384 Msa1408750:intron 20.0%
!!! CTATAAGTTGTTTTCATAAA+TGG - tig0023416:8425-8444 Msa1408750:intron 20.0%
!!! TTTCTGATTTGCATTTAAAT+AGG - tig0023416:8663-8682 Msa1408750:CDS 20.0%
!!! ATAACTTGAATGTCATTTTT+AGG - tig0023416:9078-9097 Msa1408750:intron 20.0%
!!! ATGTAAATAAACTACCTTTT+TGG - tig0023416:9531-9550 Msa1408750:intron 20.0%
!! GGTCATATAAACAATAAAAT+AGG + tig0023416:10139-10158 None:intergenic 20.0%
!! GAAGAAAATCAGAAATTTAA+AGG + tig0023416:10161-10180 None:intergenic 20.0%
!!! AAAAGTATATTAACATACCT+CGG + tig0023416:10517-10536 None:intergenic 20.0%
!! GAGATTCAAAGTATAAATAA+GGG + tig0023416:10976-10995 None:intergenic 20.0%
!!! AAAGTTGCAAGATTTTTTTA+AGG + tig0023416:11041-11060 None:intergenic 20.0%
!!! TAACTTAATCTTGTCATTTT+AGG - tig0023416:11104-11123 Msa1408750:intron 20.0%
!! TATTAATCAGTCTATTCATT+TGG - tig0023416:11650-11669 Msa1408750:intron 20.0%
!! CAAATTAACAATTTATTGAG+CGG + tig0023416:11791-11810 None:intergenic 20.0%
!! TTCTGTAAAATAAGTTTAGT+TGG - tig0023416:12461-12480 Msa1408750:intron 20.0%
!!! CTATTCAAATACATCAATTT+TGG - tig0023416:12557-12576 Msa1408750:intron 20.0%
!! CTAGACTGTATTATTAATAA+TGG - tig0023416:12625-12644 Msa1408750:intron 20.0%
! TAACTGAATATTCAGTTGAA+CGG + tig0023416:321-340 None:intergenic 25.0%
!!! CTCAAATTATTAAAAGTGTC+TGG + tig0023416:699-718 None:intergenic 25.0%
! GTTACAAAAAATGTCTAGTT+TGG - tig0023416:916-935 Msa1408750:intron 25.0%
!!! AAAGTAGTAAAGAGTGTTAT+AGG - tig0023416:1172-1191 Msa1408750:intron 25.0%
! TGTTATAGGAATTAGTTAGT+TGG - tig0023416:1186-1205 Msa1408750:intron 25.0%
! ATAGTATTCTCTAATGTGAA+AGG - tig0023416:1308-1327 Msa1408750:CDS 25.0%
! TAGTATTCTCTAATGTGAAA+GGG - tig0023416:1309-1328 Msa1408750:CDS 25.0%
! AAATTGAAATGGAAGAAATG+AGG - tig0023416:2080-2099 Msa1408750:intron 25.0%
! CATCATCTTCAAATCTTATT+TGG + tig0023416:2165-2184 None:intergenic 25.0%
!!! CCATTGTTTTTGAGTAAAAT+TGG + tig0023416:2527-2546 None:intergenic 25.0%
!! CCAATTTTACTCAAAAACAA+TGG - tig0023416:2524-2543 Msa1408750:intron 25.0%
!! TTGAGAATCGATATGATTTT+TGG + tig0023416:2583-2602 None:intergenic 25.0%
! TCTATGAATGTATTATGTTG+GGG + tig0023416:2642-2661 None:intergenic 25.0%
! CTCTATGAATGTATTATGTT+GGG + tig0023416:2643-2662 None:intergenic 25.0%
! TCTCTATGAATGTATTATGT+TGG + tig0023416:2644-2663 None:intergenic 25.0%
! ACATATTCTTCATCATAGAT+TGG + tig0023416:2833-2852 None:intergenic 25.0%
! ATCTATGATGAAGAATATGT+TGG - tig0023416:2833-2852 Msa1408750:intron 25.0%
! TGAATATGGTGAATCTTTAA+AGG - tig0023416:2997-3016 Msa1408750:intron 25.0%
! AAAATTAAAGTTGTCGACAA+AGG - tig0023416:3171-3190 Msa1408750:intron 25.0%
! CTATCATTGAATTCATTGAA+TGG + tig0023416:3448-3467 None:intergenic 25.0%
! TGAATTCAATGATAGAAAAG+AGG - tig0023416:3453-3472 Msa1408750:intron 25.0%
!!! GTTACTATTGATTTTTTCCA+TGG - tig0023416:3574-3593 Msa1408750:intron 25.0%
!!! ATTTTTTCCATGGATTACTT+TGG - tig0023416:3584-3603 Msa1408750:intron 25.0%
! AAATAGCTCATTTCATCATA+TGG - tig0023416:3656-3675 Msa1408750:intron 25.0%
!!! ATAATTTTTTAGGATCTGCT+TGG - tig0023416:4202-4221 Msa1408750:intron 25.0%
! TAACTGAATATTCAGTTGAA+CGG + tig0023416:321-340 None:intergenic 25.0%
!!! CTCAAATTATTAAAAGTGTC+TGG + tig0023416:699-718 None:intergenic 25.0%
! AAGTAGTAAAGAGTTGTTAT+AGG - tig0023416:5257-5276 Msa1408750:intron 25.0%
! TGTTATAGGAATTAGTTAGT+TGG - tig0023416:1186-1205 Msa1408750:intron 25.0%
! ATAGTATTCTCTAATGTGAA+AGG - tig0023416:1308-1327 Msa1408750:CDS 25.0%
! TAGTATTCTCTAATGTGAAA+GGG - tig0023416:1309-1328 Msa1408750:CDS 25.0%
! AAATTGAAATGGAAGAAATG+AGG - tig0023416:2080-2099 Msa1408750:intron 25.0%
! CATCATCTTCAAATCTTATT+TGG + tig0023416:2165-2184 None:intergenic 25.0%
!!! CCATTGTTTTTGAGTAAAAT+TGG + tig0023416:2527-2546 None:intergenic 25.0%
!! CCAATTTTACTCAAAAACAA+TGG - tig0023416:2524-2543 Msa1408750:intron 25.0%
!! TTGAGAATCGATATGATTTT+TGG + tig0023416:2583-2602 None:intergenic 25.0%
! TCTATGAATGTATTATGTTG+GGG + tig0023416:2642-2661 None:intergenic 25.0%
! CTCTATGAATGTATTATGTT+GGG + tig0023416:2643-2662 None:intergenic 25.0%
! TCTCTATGAATGTATTATGT+TGG + tig0023416:2644-2663 None:intergenic 25.0%
! ACATATTCTTCATCATAGAT+TGG + tig0023416:2833-2852 None:intergenic 25.0%
! ATCTATGATGAAGAATATGT+TGG - tig0023416:2833-2852 Msa1408750:intron 25.0%
! TGAATATGGTGAATCTTTAA+AGG - tig0023416:2997-3016 Msa1408750:intron 25.0%
! AAAATTAAAGTTGTCGACAA+AGG - tig0023416:3171-3190 Msa1408750:intron 25.0%
! CTATCATTGAATTCATTGAA+TGG + tig0023416:3448-3467 None:intergenic 25.0%
! TGAATTCAATGATAGAAAAG+AGG - tig0023416:3453-3472 Msa1408750:intron 25.0%
!!! GTTACTATTGATTTTTTCCA+TGG - tig0023416:3574-3593 Msa1408750:intron 25.0%
!!! ATTTTTTCCATGGATTACTT+TGG - tig0023416:3584-3603 Msa1408750:intron 25.0%
! AAATAGCTCATTTCATCATA+TGG - tig0023416:3656-3675 Msa1408750:intron 25.0%
!!! ATAATTTTTTAGGATCTGCT+TGG - tig0023416:4202-4221 Msa1408750:intron 25.0%
! TGAATAGAAATTTCTCTACA+AGG + tig0023416:8521-8540 None:intergenic 25.0%
!! AACTTGCTCATGATATAATA+TGG - tig0023416:8542-8561 Msa1408750:intron 25.0%
! ATAGGAAATTGCATGTTATA+TGG - tig0023416:8681-8700 Msa1408750:CDS 25.0%
! TAGGAAATTGCATGTTATAT+GGG - tig0023416:8682-8701 Msa1408750:CDS 25.0%
!! AATGACTGCAGTAATATTTT+TGG + tig0023416:8881-8900 None:intergenic 25.0%
! TTAGGAATGAACATAAGATA+AGG - tig0023416:9096-9115 Msa1408750:intron 25.0%
! TAGGAATGAACATAAGATAA+GGG - tig0023416:9097-9116 Msa1408750:intron 25.0%
!!! TGCTTATTTTCTTATCAACT+CGG + tig0023416:9406-9425 None:intergenic 25.0%
! ATACTGATAATCATTTGGTA+TGG + tig0023416:9495-9514 None:intergenic 25.0%
! ATTCATGTACAAGTAATGTT+AGG + tig0023416:9676-9695 None:intergenic 25.0%
! AGGTAATAGATTATTGTACA+TGG - tig0023416:9933-9952 Msa1408750:intron 25.0%
!! ATCTAAGAAAAGCAAGTTTT+GGG + tig0023416:10198-10217 None:intergenic 25.0%
! TAAAAAATGTTTGCCTGAAT+GGG + tig0023416:10240-10259 None:intergenic 25.0%
! ATAAAAAATGTTTGCCTGAA+TGG + tig0023416:10241-10260 None:intergenic 25.0%
!!! TTCAGGCAAACATTTTTTAT+TGG - tig0023416:10241-10260 Msa1408750:intron 25.0%
! TTGAAACTGTCAATGTAATT+CGG - tig0023416:10286-10305 Msa1408750:intron 25.0%
!! CTTTTATCAACAATTGCTAA+AGG + tig0023416:10474-10493 None:intergenic 25.0%
!! ATATGCTTCATTAGCTTAAA+GGG + tig0023416:10579-10598 None:intergenic 25.0%
!! AATATGCTTCATTAGCTTAA+AGG + tig0023416:10580-10599 None:intergenic 25.0%
!! AAACTTTAGGCTTTTCTTAT+TGG - tig0023416:10621-10640 Msa1408750:intron 25.0%
!!! AATTTGATTGGTGATGTAAA+AGG - tig0023416:10668-10687 Msa1408750:intron 25.0%
! TTGAGTCCTTATTCATAAAA+AGG - tig0023416:10892-10911 Msa1408750:intron 25.0%
!! TCATGACCTTTTTATGAATA+AGG + tig0023416:10901-10920 None:intergenic 25.0%
! GGAGATTCAAAGTATAAATA+AGG + tig0023416:10977-10996 None:intergenic 25.0%
! AAAAATCTTGCAACTTTACA+AGG - tig0023416:11044-11063 Msa1408750:intron 25.0%
! AAGAAAATTCAGAAACTCAA+TGG + tig0023416:11081-11100 None:intergenic 25.0%
! TTAGAGATGAAAATCATTCT+AGG - tig0023416:11581-11600 Msa1408750:intron 25.0%
! TTGTGGTGAAATGAAAATAA+AGG - tig0023416:11977-11996 Msa1408750:intron 25.0%
! TGTGGTGAAATGAAAATAAA+GGG - tig0023416:11978-11997 Msa1408750:intron 25.0%
! TATCTATATTCATGACATCT+AGG + tig0023416:12156-12175 None:intergenic 25.0%
!!! CTTAGTTGTTTTTTGATACA+AGG - tig0023416:12225-12244 Msa1408750:intron 25.0%
! TACTGATAAGACAGTTAATT+GGG + tig0023416:12380-12399 None:intergenic 25.0%
! TCATTCTACCAATAGAAAAA+AGG - tig0023416:12492-12511 Msa1408750:intron 25.0%
! TAATACAGTCTAGCAATAAA+TGG + tig0023416:12618-12637 None:intergenic 25.0%
!! TTTTATAGCAAAAACAGAAG+AGG + tig0023416:12699-12718 None:intergenic 25.0%
! TAGCAAAAATTATTGCTCAA+CGG + tig0023416:12730-12749 None:intergenic 25.0%
!!! TTTGCTAGTTTTGTTTGTAT+AGG - tig0023416:12743-12762 Msa1408750:CDS 25.0%
! ATTGCAAGATAAATCTACTT+TGG + tig0023416:12781-12800 None:intergenic 25.0%
! ACAAAATTATACTCATCAAG+CGG + tig0023416:13070-13089 None:intergenic 25.0%
ATAGCTGAATGTGAATTTCT+TGG - tig0023416:238-257 Msa1408750:three_prime_UTR 30.0%
TCAACTGAATATTCAGTTAC+CGG - tig0023416:322-341 Msa1408750:intron 30.0%
TCTTTCCGAATACGATAATA+AGG - tig0023416:832-851 Msa1408750:CDS 30.0%
ATAAACTATTAGGCTCAGTT+TGG + tig0023416:968-987 None:intergenic 30.0%
AAACTGAGCCTAATAGTTTA+TGG - tig0023416:967-986 Msa1408750:intron 30.0%
GTGAAGAACCATAAACTATT+AGG + tig0023416:978-997 None:intergenic 30.0%
ATAGGAATTAGTTAGTTGGT+TGG - tig0023416:1190-1209 Msa1408750:intron 30.0%
TAGGAATTAGTTAGTTGGTT+GGG - tig0023416:1191-1210 Msa1408750:intron 30.0%
AGTATTCTCTAATGTGAAAG+GGG - tig0023416:1310-1329 Msa1408750:CDS 30.0%
AACCCTTTGATAGAGAATTA+TGG - tig0023416:1334-1353 Msa1408750:intron 30.0%
CTCCATAATTCTCTATCAAA+GGG + tig0023416:1339-1358 None:intergenic 30.0%
TCTCCATAATTCTCTATCAA+AGG + tig0023416:1340-1359 None:intergenic 30.0%
AGTTTAAGCGAAGAAATCAA+CGG - tig0023416:1751-1770 Msa1408750:intron 30.0%
TTTCTCAAAACTTCACTTTG+CGG - tig0023416:1916-1935 Msa1408750:intron 30.0%
CTTTAATATCATTCACCTGA+AGG + tig0023416:2240-2259 None:intergenic 30.0%
! TAGACATTCCAGATTTTGAA+GGG - tig0023416:2260-2279 Msa1408750:intron 30.0%
TGAACGTGTATTTGAGTATA+AGG - tig0023416:2324-2343 Msa1408750:intron 30.0%
!!! ATCTTTACTTTTTGCTCTTC+CGG + tig0023416:2355-2374 None:intergenic 30.0%
TGAAGAAACATGCTTCAATT+TGG - tig0023416:2389-2408 Msa1408750:intron 30.0%
AATGAGGAGGTAAATACTTA+CGG + tig0023416:2495-2514 None:intergenic 30.0%
! TTGGATTGATAATAATGAGG+AGG + tig0023416:2508-2527 None:intergenic 30.0%
!!! AGGTTGGTATGAAGATTTTT+AGG + tig0023416:2550-2569 None:intergenic 30.0%
!!! AATCGATATGATTTTTGGTG+GGG + tig0023416:2578-2597 None:intergenic 30.0%
!!! GAATCGATATGATTTTTGGT+GGG + tig0023416:2579-2598 None:intergenic 30.0%
!! AGAATCGATATGATTTTTGG+TGG + tig0023416:2580-2599 None:intergenic 30.0%
CTTGAAACATTTAGGTATCT+TGG + tig0023416:2673-2692 None:intergenic 30.0%
! CTAAATGTTTCAAGTGTCAA+GGG - tig0023416:2679-2698 Msa1408750:CDS 30.0%
CTTTATGATTCACACATCTA+AGG + tig0023416:2718-2737 None:intergenic 30.0%
! ATTTGTGAAGTGTTTGAAGA+AGG - tig0023416:2863-2882 Msa1408750:intron 30.0%
! TTTGTGAAGTGTTTGAAGAA+GGG - tig0023416:2864-2883 Msa1408750:intron 30.0%
AACACTTCATGAATGTCATA+GGG + tig0023416:2926-2945 None:intergenic 30.0%
ACGCATTCTTCATCATATAT+TGG + tig0023416:2971-2990 None:intergenic 30.0%
AAAGATTCACCATATTCAGA+AGG + tig0023416:2995-3014 None:intergenic 30.0%
! AATAATGGAAGCTGTGAAAA+TGG - tig0023416:3127-3146 Msa1408750:intron 30.0%
ATCAATGGAAAATGAGACAA+TGG + tig0023416:3263-3282 None:intergenic 30.0%
TTGAATTCATTGAATGGTAG+AGG + tig0023416:3442-3461 None:intergenic 30.0%
AACTTTGTATTCTCCTTGAA+TGG + tig0023416:3514-3533 None:intergenic 30.0%
AAAACTGAAGGATTCCAAAA+TGG - tig0023416:3612-3631 Msa1408750:intron 30.0%
ATAGCTGAATGTGAATTTCT+TGG - tig0023416:238-257 Msa1408750:three_prime_UTR 30.0%
TCAACTGAATATTCAGTTAC+CGG - tig0023416:322-341 Msa1408750:intron 30.0%
TCTTTCCGAATACGATAATA+AGG - tig0023416:832-851 Msa1408750:CDS 30.0%
ATAAACTATTAGGCTCAGTT+TGG + tig0023416:968-987 None:intergenic 30.0%
AAACTGAGCCTAATAGTTTA+TGG - tig0023416:967-986 Msa1408750:intron 30.0%
GTGAAGAACCATAAACTATT+AGG + tig0023416:978-997 None:intergenic 30.0%
ATAGGAATTAGTTAGTTGGT+TGG - tig0023416:1190-1209 Msa1408750:intron 30.0%
TAGGAATTAGTTAGTTGGTT+GGG - tig0023416:1191-1210 Msa1408750:intron 30.0%
AGTATTCTCTAATGTGAAAG+GGG - tig0023416:1310-1329 Msa1408750:CDS 30.0%
AACCCTTTGATAGAGAATTA+TGG - tig0023416:1334-1353 Msa1408750:intron 30.0%
CTCCATAATTCTCTATCAAA+GGG + tig0023416:1339-1358 None:intergenic 30.0%
TCTCCATAATTCTCTATCAA+AGG + tig0023416:1340-1359 None:intergenic 30.0%
AGTTTAAGCGAAGAAATCAA+CGG - tig0023416:1751-1770 Msa1408750:intron 30.0%
TTTCTCAAAACTTCACTTTG+CGG - tig0023416:1916-1935 Msa1408750:intron 30.0%
CTTTAATATCATTCACCTGA+AGG + tig0023416:2240-2259 None:intergenic 30.0%
! TAGACATTCCAGATTTTGAA+GGG - tig0023416:2260-2279 Msa1408750:intron 30.0%
TGAACGTGTATTTGAGTATA+AGG - tig0023416:2324-2343 Msa1408750:intron 30.0%
!!! ATCTTTACTTTTTGCTCTTC+CGG + tig0023416:2355-2374 None:intergenic 30.0%
TGAAGAAACATGCTTCAATT+TGG - tig0023416:2389-2408 Msa1408750:intron 30.0%
AATGAGGAGGTAAATACTTA+CGG + tig0023416:2495-2514 None:intergenic 30.0%
! TTGGATTGATAATAATGAGG+AGG + tig0023416:2508-2527 None:intergenic 30.0%
!!! GGTTGGTATGAAGATTTTTT+AGG + tig0023416:6635-6654 None:intergenic 30.0%
!!! AATCGATATGATTTTTGGTG+GGG + tig0023416:2578-2597 None:intergenic 30.0%
!!! GAATCGATATGATTTTTGGT+GGG + tig0023416:2579-2598 None:intergenic 30.0%
!! AGAATCGATATGATTTTTGG+TGG + tig0023416:2580-2599 None:intergenic 30.0%
CTTGAAACATTTAGGTATCT+TGG + tig0023416:2673-2692 None:intergenic 30.0%
! CTAAATGTTTCAAGTGTCAA+GGG - tig0023416:2679-2698 Msa1408750:CDS 30.0%
CTTTATGATTCACACATCTA+AGG + tig0023416:2718-2737 None:intergenic 30.0%
! ATTTGTGAAGTGTTTGAAGA+AGG - tig0023416:2863-2882 Msa1408750:intron 30.0%
! TTTGTGAAGTGTTTGAAGAA+GGG - tig0023416:2864-2883 Msa1408750:intron 30.0%
AACACTTCATGAATGTCATA+GGG + tig0023416:2926-2945 None:intergenic 30.0%
ACGCATTCTTCATCATATAT+TGG + tig0023416:2971-2990 None:intergenic 30.0%
AAAGATTCACCATATTCAGA+AGG + tig0023416:2995-3014 None:intergenic 30.0%
! AATAATGGAAGCTGTGAAAA+TGG - tig0023416:3127-3146 Msa1408750:intron 30.0%
ATCAATGGAAAATGAGACAA+TGG + tig0023416:3263-3282 None:intergenic 30.0%
TTGAATTCATTGAATGGTAG+AGG + tig0023416:3442-3461 None:intergenic 30.0%
AACTTTGTATTCTCCTTGAA+TGG + tig0023416:3514-3533 None:intergenic 30.0%
AAAACTGAAGGATTCCAAAA+TGG - tig0023416:3612-3631 Msa1408750:intron 30.0%
TGCTCATGATATAATATGGT+TGG - tig0023416:8546-8565 Msa1408750:intron 30.0%
ATACAATCTGTATTCAACAC+AGG + tig0023416:9015-9034 None:intergenic 30.0%
!! TCTTTTGTTATCAGACCAAA+TGG - tig0023416:9301-9320 Msa1408750:intron 30.0%
!! CTTTTGTTATCAGACCAAAT+GGG - tig0023416:9302-9321 Msa1408750:intron 30.0%
ACCAAATGATTATCAGTATC+AGG - tig0023416:9496-9515 Msa1408750:intron 30.0%
TGTAAAGATGACAATATCCA+AGG - tig0023416:9578-9597 Msa1408750:intron 30.0%
GGTTCAGTTTAGTTAAAACA+TGG - tig0023416:9749-9768 Msa1408750:intron 30.0%
GCAAATTTAATTACAGAAGC+TGG - tig0023416:9827-9846 Msa1408750:intron 30.0%
TATTCATAGCATGTTCGTTT+GGG + tig0023416:10015-10034 None:intergenic 30.0%
ATATTCATAGCATGTTCGTT+TGG + tig0023416:10016-10035 None:intergenic 30.0%
! CATCTAAGAAAAGCAAGTTT+TGG + tig0023416:10199-10218 None:intergenic 30.0%
AAAAAATGTTTGCCTGAATG+GGG + tig0023416:10239-10258 None:intergenic 30.0%
!!! AGGCAAACATTTTTTATTGG+TGG - tig0023416:10244-10263 Msa1408750:intron 30.0%
GAATTACATTGACAGTTTCA+AGG + tig0023416:10287-10306 None:intergenic 30.0%
! ATTGTTGATAAAAGACGTCA+TGG - tig0023416:10480-10499 Msa1408750:intron 30.0%
! TTGTTGATAAAAGACGTCAT+GGG - tig0023416:10481-10500 Msa1408750:intron 30.0%
! TACTTTTCTTAAGATCTCTC+AGG - tig0023416:10530-10549 Msa1408750:intron 30.0%
GTCTAGATTGAAGAAACTTT+AGG - tig0023416:10608-10627 Msa1408750:intron 30.0%
! GCTTTTCTTTTCTATTTCGT+AGG - tig0023416:10941-10960 Msa1408750:intron 30.0%
TCAAATGAAAAAGTCGCAAT+AGG - tig0023416:11224-11243 Msa1408750:intron 30.0%
! AATAAGAAGGTATGTTGCAA+CGG + tig0023416:11396-11415 None:intergenic 30.0%
TCAACGAATGACAAATAAGA+AGG + tig0023416:11409-11428 None:intergenic 30.0%
TTATTTGTCATTCGTTGACA+TGG - tig0023416:11411-11430 Msa1408750:intron 30.0%
CAATGCATTTATTGATCAAG+TGG - tig0023416:11437-11456 Msa1408750:intron 30.0%
GACTGATTAATATAAAGCCA+AGG + tig0023416:11642-11661 None:intergenic 30.0%
CAAACAATCAAGAATCTTAG+AGG + tig0023416:11718-11737 None:intergenic 30.0%
GTACGTAACAATAGTGAAAA+GGG + tig0023416:12013-12032 None:intergenic 30.0%
AGTACGTAACAATAGTGAAA+AGG + tig0023416:12014-12033 None:intergenic 30.0%
TGAAGAATGTATTGCAATGA+TGG - tig0023416:12188-12207 Msa1408750:intron 30.0%
ACTGATAAGACAGTTAATTG+GGG + tig0023416:12379-12398 None:intergenic 30.0%
CTACTGATAAGACAGTTAAT+TGG + tig0023416:12381-12400 None:intergenic 30.0%
!!! AGTAGTCTCCTTTTTTCTAT+TGG + tig0023416:12503-12522 None:intergenic 30.0%
ATAAAGTTGAGCATGTAACT+TGG - tig0023416:12580-12599 Msa1408750:intron 30.0%
AATTGAACCTTATTCCAGTT+TGG - tig0023416:12832-12851 Msa1408750:CDS 30.0%
ATTGAACCTTATTCCAGTTT+GGG - tig0023416:12833-12852 Msa1408750:CDS 30.0%
AAACACACTGTAGGTATATT+TGG - tig0023416:13015-13034 Msa1408750:CDS 30.0%
! TAGGTATATTTGGAATTCAC+AGG - tig0023416:13025-13044 Msa1408750:CDS 30.0%
CAAAATTATACTCATCAAGC+GGG + tig0023416:13069-13088 None:intergenic 30.0%
! ATAGATTGTGTGACTGTTTT+CGG - tig0023416:13097-13116 Msa1408750:five_prime_UTR 30.0%
GTAAACGGTTACGCTAAATT+CGG + tig0023416:45-64 None:intergenic 35.0%
GGACATGATGAATGAATGAA+TGG + tig0023416:79-98 None:intergenic 35.0%
GAAAGAAGATTGAAGTAGAG+TGG + tig0023416:100-119 None:intergenic 35.0%
TGTAGTACAATCTGTCAATC+TGG - tig0023416:279-298 Msa1408750:exon 35.0%
CAATCTGTCAATCTGGAAAA+CGG - tig0023416:286-305 Msa1408750:exon 35.0%
GAATATTCAGTTGAACGGTA+CGG + tig0023416:316-335 None:intergenic 35.0%
TTCAATTCCGAGTTATCTAG+TGG - tig0023416:354-373 Msa1408750:intron 35.0%
AGATCATGAATACGAGTGTT+TGG + tig0023416:382-401 None:intergenic 35.0%
! AATCGTCTTCGTATTTTCTC+TGG - tig0023416:412-431 Msa1408750:intron 35.0%
ACATTCTGTACGATCAAGAT+TGG + tig0023416:470-489 None:intergenic 35.0%
TAAATATGACCTGACAAGCA+CGG - tig0023416:663-682 Msa1408750:intron 35.0%
TACCAATCTCACTGTTCATT+AGG - tig0023416:1120-1139 Msa1408750:intron 35.0%
ATCCTAATGAACAGTGAGAT+TGG + tig0023416:1125-1144 None:intergenic 35.0%
TAAATAGCCCTTCATTTCCT+AGG - tig0023416:1253-1272 Msa1408750:intron 35.0%
AGATACTCCTAGGAAATGAA+GGG + tig0023416:1263-1282 None:intergenic 35.0%
AAGATACTCCTAGGAAATGA+AGG + tig0023416:1264-1283 None:intergenic 35.0%
CAATGTTCAAAGATACTCCT+AGG + tig0023416:1273-1292 None:intergenic 35.0%
!! TAGCATCTCTAGAACTTTCT+AGG - tig0023416:1446-1465 Msa1408750:intron 35.0%
TTTGAATGTGCCTAAACACT+TGG + tig0023416:1596-1615 None:intergenic 35.0%
CTTTGTGAAACATCACTTTG+CGG - tig0023416:1805-1824 Msa1408750:intron 35.0%
TGTTTCTTTCGCGAACAAAA+TGG + tig0023416:1831-1850 None:intergenic 35.0%
TCTTCGCTCAAACAAAATGA+AGG + tig0023416:1854-1873 None:intergenic 35.0%
!!! TGTTTTTTGGGTGAAGATTG+TGG + tig0023416:1989-2008 None:intergenic 35.0%
! GATCTTTCGTTTTGTCTTCT+AGG + tig0023416:2052-2071 None:intergenic 35.0%
!! TATTTGGTGTGCTTCCAATA+AGG + tig0023416:2149-2168 None:intergenic 35.0%
AGATTTGAAGATGATGACTC+CGG - tig0023416:2169-2188 Msa1408750:intron 35.0%
TAATATCATTCACCTGAAGG+TGG + tig0023416:2237-2256 None:intergenic 35.0%
! GTAGACATTCCAGATTTTGA+AGG - tig0023416:2259-2278 Msa1408750:intron 35.0%
TGTAGATTCCCTTCAAAATC+TGG + tig0023416:2271-2290 None:intergenic 35.0%
!! TTTTGAAGGGAATCTACAAC+CGG - tig0023416:2273-2292 Msa1408750:intron 35.0%
AACCAATCCAGAAAATCATC+CGG + tig0023416:2295-2314 None:intergenic 35.0%
ACGTGTATTTGAGTATAAGG+AGG - tig0023416:2327-2346 Msa1408750:intron 35.0%
ATTTGAGTATAAGGAGGTTC+CGG - tig0023416:2333-2352 Msa1408750:intron 35.0%
AGAAACATGCTTCAATTTGG+TGG - tig0023416:2392-2411 Msa1408750:intron 35.0%
GAAACATGCTTCAATTTGGT+GGG - tig0023416:2393-2412 Msa1408750:intron 35.0%
TTTGGTGGGAAAATCTCAAA+AGG - tig0023416:2407-2426 Msa1408750:intron 35.0%
AAAAGGAGACGTAAGTATGA+AGG - tig0023416:2424-2443 Msa1408750:CDS 35.0%
AAAGGAGACGTAAGTATGAA+GGG - tig0023416:2425-2444 Msa1408750:CDS 35.0%
!!! ATCGATATGATTTTTGGTGG+GGG + tig0023416:2577-2596 None:intergenic 35.0%
GTTTGAATGAGGAAATAGGT+TGG + tig0023416:2620-2639 None:intergenic 35.0%
ATTATGTTGGGGTTTGAATG+AGG + tig0023416:2631-2650 None:intergenic 35.0%
CCTTGACACTTGAAACATTT+AGG + tig0023416:2681-2700 None:intergenic 35.0%
! CCTAAATGTTTCAAGTGTCA+AGG - tig0023416:2678-2697 Msa1408750:CDS 35.0%
! TTGTGAAGTGTTTGAAGAAG+GGG - tig0023416:2865-2884 Msa1408750:intron 35.0%
CAACACTTCATGAATGTCAT+AGG + tig0023416:2927-2946 None:intergenic 35.0%
CTATGACATTCATGAAGTGT+TGG - tig0023416:2925-2944 Msa1408750:intron 35.0%
ATTGTAGATTGTACGGATGT+GGG + tig0023416:3201-3220 None:intergenic 35.0%
!! TTGAGGCATTGTAGATTGTA+CGG + tig0023416:3208-3227 None:intergenic 35.0%
TTACCTCATTATCCTTGTTG+AGG + tig0023416:3225-3244 None:intergenic 35.0%
ATACTTGCCACATTCATCTT+GGG - tig0023416:3326-3345 Msa1408750:CDS 35.0%
TTTGAGTCCAAAGTAATCCA+TGG + tig0023416:3594-3613 None:intergenic 35.0%
ACTTTGGACTCAAAAACTGA+AGG - tig0023416:3600-3619 Msa1408750:intron 35.0%
! CTTGTCTTTGACTACCATTT+TGG + tig0023416:3629-3648 None:intergenic 35.0%
TTTCATCATATGGTAGACGA+AGG - tig0023416:3666-3685 Msa1408750:intron 35.0%
!! AAGGAAGAAATATTGACTCG+AGG - tig0023416:3685-3704 Msa1408750:intron 35.0%
TAATTCTCTATCATTCTCCC+CGG + tig0023416:3727-3746 None:intergenic 35.0%
GGGAGAATGATAGAGAATTA+TGG - tig0023416:3727-3746 Msa1408750:intron 35.0%
!! TAGCATCTCTAGAACTTTCT+AGG - tig0023416:1446-1465 Msa1408750:intron 35.0%
TTTGAATGTGCCTAAACACT+TGG + tig0023416:1596-1615 None:intergenic 35.0%
!!! ATATTGGTTTTCTCCTCCAA+GGG + tig0023416:4109-4128 None:intergenic 35.0%
!!! TATATTGGTTTTCTCCTCCA+AGG + tig0023416:4110-4129 None:intergenic 35.0%
TGTAGTACAATCTGTCAATC+TGG - tig0023416:279-298 Msa1408750:exon 35.0%
CAATCTGTCAATCTGGAAAA+CGG - tig0023416:286-305 Msa1408750:exon 35.0%
GAATATTCAGTTGAACGGTA+CGG + tig0023416:316-335 None:intergenic 35.0%
TTCAATTCCGAGTTATCTAG+TGG - tig0023416:354-373 Msa1408750:intron 35.0%
AGATCATGAATACGAGTGTT+TGG + tig0023416:382-401 None:intergenic 35.0%
! AATCGTCTTCGTATTTTCTC+TGG - tig0023416:412-431 Msa1408750:intron 35.0%
ACATTCTGTACGATCAAGAT+TGG + tig0023416:470-489 None:intergenic 35.0%
TAAATATGACCTGACAAGCA+CGG - tig0023416:663-682 Msa1408750:intron 35.0%
TACCAATCTCACTGTTCATT+AGG - tig0023416:1120-1139 Msa1408750:intron 35.0%
ATCCTAATGAACAGTGAGAT+TGG + tig0023416:1125-1144 None:intergenic 35.0%
TAAATAGCCCTTCATTTCCT+AGG - tig0023416:1253-1272 Msa1408750:intron 35.0%
AGATACTCCTAGGAAATGAA+GGG + tig0023416:1263-1282 None:intergenic 35.0%
AAGATACTCCTAGGAAATGA+AGG + tig0023416:1264-1283 None:intergenic 35.0%
CAATGTTCAAAGATACTCCT+AGG + tig0023416:1273-1292 None:intergenic 35.0%
!! TAGCATCTCTAGAACTTTCT+AGG - tig0023416:1446-1465 Msa1408750:intron 35.0%
TTTGAATGTGCCTAAACACT+TGG + tig0023416:1596-1615 None:intergenic 35.0%
CTTTGTGAAACATCACTTTG+CGG - tig0023416:1805-1824 Msa1408750:intron 35.0%
TGTTTCTTTCGCGAACAAAA+TGG + tig0023416:1831-1850 None:intergenic 35.0%
TCTTCGCTCAAACAAAATGA+AGG + tig0023416:1854-1873 None:intergenic 35.0%
!!! TGTTTTTTGGGTGAAGATTG+TGG + tig0023416:1989-2008 None:intergenic 35.0%
! GATCTTTCGTTTTGTCTTCT+AGG + tig0023416:2052-2071 None:intergenic 35.0%
!! TATTTGGTGTGCTTCCAATA+AGG + tig0023416:2149-2168 None:intergenic 35.0%
AGATTTGAAGATGATGACTC+CGG - tig0023416:2169-2188 Msa1408750:intron 35.0%
TAATATCATTCACCTGAAGG+TGG + tig0023416:2237-2256 None:intergenic 35.0%
! GTAGACATTCCAGATTTTGA+AGG - tig0023416:2259-2278 Msa1408750:intron 35.0%
TGTAGATTCCCTTCAAAATC+TGG + tig0023416:2271-2290 None:intergenic 35.0%
!! TTTTGAAGGGAATCTACAAC+CGG - tig0023416:2273-2292 Msa1408750:intron 35.0%
AACCAATCCAGAAAATCATC+CGG + tig0023416:2295-2314 None:intergenic 35.0%
ACGTGTATTTGAGTATAAGG+AGG - tig0023416:2327-2346 Msa1408750:intron 35.0%
ATTTGAGTATAAGGAGGTTC+CGG - tig0023416:2333-2352 Msa1408750:intron 35.0%
AGAAACATGCTTCAATTTGG+TGG - tig0023416:2392-2411 Msa1408750:intron 35.0%
GAAACATGCTTCAATTTGGT+GGG - tig0023416:2393-2412 Msa1408750:intron 35.0%
TTTGGTGGGAAAATCTCAAA+AGG - tig0023416:2407-2426 Msa1408750:intron 35.0%
AAAAGGAGACGTAAGTATGA+AGG - tig0023416:2424-2443 Msa1408750:CDS 35.0%
AAAGGAGACGTAAGTATGAA+GGG - tig0023416:2425-2444 Msa1408750:CDS 35.0%
GTTTGAATGAGGAAATAGGT+TGG + tig0023416:2620-2639 None:intergenic 35.0%
ATTATGTTGGGGTTTGAATG+AGG + tig0023416:2631-2650 None:intergenic 35.0%
CCTTGACACTTGAAACATTT+AGG + tig0023416:2681-2700 None:intergenic 35.0%
! CCTAAATGTTTCAAGTGTCA+AGG - tig0023416:2678-2697 Msa1408750:CDS 35.0%
! TTGTGAAGTGTTTGAAGAAG+GGG - tig0023416:2865-2884 Msa1408750:intron 35.0%
CAACACTTCATGAATGTCAT+AGG + tig0023416:2927-2946 None:intergenic 35.0%
CTATGACATTCATGAAGTGT+TGG - tig0023416:2925-2944 Msa1408750:intron 35.0%
ATTGTAGATTGTACGGATGT+GGG + tig0023416:3201-3220 None:intergenic 35.0%
!! TTGAGGCATTGTAGATTGTA+CGG + tig0023416:3208-3227 None:intergenic 35.0%
TTACCTCATTATCCTTGTTG+AGG + tig0023416:3225-3244 None:intergenic 35.0%
ATACTTGCCACATTCATCTT+GGG - tig0023416:3326-3345 Msa1408750:CDS 35.0%
TTTGAGTCCAAAGTAATCCA+TGG + tig0023416:3594-3613 None:intergenic 35.0%
ACTTTGGACTCAAAAACTGA+AGG - tig0023416:3600-3619 Msa1408750:intron 35.0%
! CTTGTCTTTGACTACCATTT+TGG + tig0023416:3629-3648 None:intergenic 35.0%
TTTCATCATATGGTAGACGA+AGG - tig0023416:3666-3685 Msa1408750:intron 35.0%
!! AAGGAAGAAATATTGACTCG+AGG - tig0023416:3685-3704 Msa1408750:intron 35.0%
TAATTCTCTATCATTCTCCC+CGG + tig0023416:3727-3746 None:intergenic 35.0%
GGGAGAATGATAGAGAATTA+TGG - tig0023416:3727-3746 Msa1408750:intron 35.0%
!! TAGCATCTCTAGAACTTTCT+AGG - tig0023416:1446-1465 Msa1408750:intron 35.0%
TTTGAATGTGCCTAAACACT+TGG + tig0023416:1596-1615 None:intergenic 35.0%
!!! ATATTGGTTTTCTCCTCCAA+GGG + tig0023416:4109-4128 None:intergenic 35.0%
!!! TATATTGGTTTTCTCCTCCA+AGG + tig0023416:4110-4129 None:intergenic 35.0%
! GTTTTTCTGAGCTTAACTAC+TGG + tig0023416:8491-8510 None:intergenic 35.0%
GAAATTTCTCTACAAGGACA+TGG + tig0023416:8515-8534 None:intergenic 35.0%
! TCTTAATTTTTCCCAGATCC+AGG + tig0023416:8708-8727 None:intergenic 35.0%
! AAGATAAAACGTTTTGCCGA+TGG - tig0023416:8724-8743 Msa1408750:CDS 35.0%
! AGATAAAACGTTTTGCCGAT+GGG - tig0023416:8725-8744 Msa1408750:CDS 35.0%
! ACTGCAGTCATTCCATATTT+TGG - tig0023416:8889-8908 Msa1408750:intron 35.0%
GCTCTAGCATATCCAAAATA+TGG + tig0023416:8904-8923 None:intergenic 35.0%
ATATGCTAGAGCTGATAGAA+AGG - tig0023416:8912-8931 Msa1408750:intron 35.0%
TGATAGAAAAGTCTCCCATT+TGG + tig0023416:9319-9338 None:intergenic 35.0%
!! TAAGCTTTTGGGAGAGTTTA+TGG + tig0023416:9343-9362 None:intergenic 35.0%
GCCTGATACTGATAATCATT+TGG + tig0023416:9500-9519 None:intergenic 35.0%
GATACAGAGATATGCCAAAA+AGG + tig0023416:9548-9567 None:intergenic 35.0%
CATATCTCTGTATCATACTG+TGG - tig0023416:9554-9573 Msa1408750:intron 35.0%
AACTACTGTTTCAGACTCAA+GGG - tig0023416:9777-9796 Msa1408750:intron 35.0%
ATTCCAGTTGATCATGTGTA+TGG - tig0023416:9908-9927 Msa1408750:intron 35.0%
CATCACAATTCTGAACAGAA+AGG - tig0023416:10094-10113 Msa1408750:intron 35.0%
AATTCTGAACAGAAAGGACA+AGG - tig0023416:10100-10119 Msa1408750:intron 35.0%
AAAAATGTTTGCCTGAATGG+GGG + tig0023416:10238-10257 None:intergenic 35.0%
TACATTGACAGTTTCAAGGT+AGG + tig0023416:10283-10302 None:intergenic 35.0%
! ATCTGAACAAATAGTCTTGC+TGG + tig0023416:10376-10395 None:intergenic 35.0%
!!! AGGAGCATCAGATAACTTTT+TGG + tig0023416:10454-10473 None:intergenic 35.0%
! TTGGATGAATCTCATTTTGC+AGG - tig0023416:10640-10659 Msa1408750:intron 35.0%
TTGCAGGTGATGAATTTGAT+TGG - tig0023416:10656-10675 Msa1408750:intron 35.0%
!! GATTGGTGATGTAAAAGGAA+AGG - tig0023416:10673-10692 Msa1408750:intron 35.0%
CAGTCAGCAAAACATATAAG+AGG + tig0023416:10858-10877 None:intergenic 35.0%
! TTCAGAAACTCAATGGATTC+AGG + tig0023416:11074-11093 None:intergenic 35.0%
ACAATAGTGAGATCCTAATC+AGG - tig0023416:11139-11158 Msa1408750:intron 35.0%
! CATTCCTTGACACAGTTTTA+AGG - tig0023416:11309-11328 Msa1408750:intron 35.0%
ATCTATTGAGATAGACGCAA+TGG - tig0023416:11333-11352 Msa1408750:intron 35.0%
TCTATTGAGATAGACGCAAT+GGG - tig0023416:11334-11353 Msa1408750:intron 35.0%
ACCTGACAGATTAAACATGA+TGG - tig0023416:11610-11629 Msa1408750:intron 35.0%
ACCATCATGTTTAATCTGTC+AGG + tig0023416:11614-11633 None:intergenic 35.0%
! ATCTTAGAGGTATATCGAAG+CGG + tig0023416:11705-11724 None:intergenic 35.0%
CACTTGAATCGTGTTAATTG+TGG - tig0023416:11960-11979 Msa1408750:intron 35.0%
TAGATTGATCTCAAGAGTTG+TGG - tig0023416:12045-12064 Msa1408750:intron 35.0%
AGAGTGTGTTAAGTATGTCT+GGG - tig0023416:12070-12089 Msa1408750:intron 35.0%
CTGATAAGACAGTTAATTGG+GGG + tig0023416:12378-12397 None:intergenic 35.0%
TTATCAGTAGCAAACCTTCT+GGG - tig0023416:12391-12410 Msa1408750:intron 35.0%
TGTATGTAAGCATGCAAGTA+TGG + tig0023416:12528-12547 None:intergenic 35.0%
! TGCTCTGTTTTATCTTTGTC+AGG - tig0023416:12805-12824 Msa1408750:CDS 35.0%
! GCTCTGTTTTATCTTTGTCA+GGG - tig0023416:12806-12825 Msa1408750:CDS 35.0%
!! ATACCTTTTAGAGAGCTGTT+TGG - tig0023416:12973-12992 Msa1408750:CDS 35.0%
!! TACCTTTTAGAGAGCTGTTT+GGG - tig0023416:12974-12993 Msa1408750:CDS 35.0%
GTACTTGAAAAACACACTGT+AGG - tig0023416:13006-13025 Msa1408750:CDS 35.0%
CTAAATTCGGAAGGAGGATT+AGG + tig0023416:32-51 None:intergenic 40.0%
ATGGCGTAACACTCAGTAAA+CGG + tig0023416:60-79 None:intergenic 40.0%
ACTGAATATTCAGTTACCGG+TGG - tig0023416:325-344 Msa1408750:intron 40.0%
AGCTGAGTCAGATTATAGTG+CGG - tig0023416:571-590 Msa1408750:intron 40.0%
AAATATGACCTGACAAGCAC+GGG - tig0023416:664-683 Msa1408750:intron 40.0%
TGTCAACTAGCTATGAAGCA+TGG + tig0023416:785-804 None:intergenic 40.0%
GGTCATACGAGCTTATAAGT+TGG - tig0023416:937-956 Msa1408750:intron 40.0%
! AAATCTGGTTCAGGGACAAA+AGG + tig0023416:1698-1717 None:intergenic 40.0%
! TTTTGTCCCTGAACCAGATT+TGG - tig0023416:1697-1716 Msa1408750:intron 40.0%
!!! AGTGAGTTTTCAAGTGAGCA+AGG - tig0023416:1776-1795 Msa1408750:intron 40.0%
CGCAAAGTGATGTTTCACAA+AGG + tig0023416:1807-1826 None:intergenic 40.0%
!!! TGAGTTTTCAAGTGAGAGCA+AGG - tig0023416:1887-1906 Msa1408750:intron 40.0%
!!! TTTTTGGGTGAAGATTGTGG+CGG + tig0023416:1986-2005 None:intergenic 40.0%
!! TCTAGGTGGCATTTTGACAA+TGG + tig0023416:2035-2054 None:intergenic 40.0%
! CTTTCGTTTTGTCTTCTAGG+TGG + tig0023416:2049-2068 None:intergenic 40.0%
GCGACAAATTCAACTACTAC+AGG - tig0023416:2102-2121 Msa1408750:intron 40.0%
AGATGATGAAGAGTCACTAC+CGG + tig0023416:2191-2210 None:intergenic 40.0%
! TCTACAACCGGATGATTTTC+TGG - tig0023416:2285-2304 Msa1408750:intron 40.0%
! AACCGGATGATTTTCTGGAT+TGG - tig0023416:2290-2309 Msa1408750:intron 40.0%
TGAAGCATGTTTCTTCAGCT+TGG + tig0023416:2386-2405 None:intergenic 40.0%
!! GAATGAGGAAATAGGTTGGT+GGG + tig0023416:2616-2635 None:intergenic 40.0%
! TGAATGAGGAAATAGGTTGG+TGG + tig0023416:2617-2636 None:intergenic 40.0%
TGGGGTTTGAATGAGGAAAT+AGG + tig0023416:2624-2643 None:intergenic 40.0%
! TGTTTCAAGTGTCAAGGGTA+TGG - tig0023416:2684-2703 Msa1408750:CDS 40.0%
AGTATTCACCATCGTCAATG+AGG - tig0023416:2736-2755 Msa1408750:CDS 40.0%
GTTTATCTCCTCATTGACGA+TGG + tig0023416:2747-2766 None:intergenic 40.0%
ATCATTTGAAGATGAGACGC+TGG - tig0023416:2802-2821 Msa1408750:intron 40.0%
TCATTTGAAGATGAGACGCT+GGG - tig0023416:2803-2822 Msa1408750:intron 40.0%
! TGTGAAGTGTTTGAAGAAGG+GGG - tig0023416:2866-2885 Msa1408750:intron 40.0%
!! TCATGAAGTGTTGGAACAAG+AGG - tig0023416:2934-2953 Msa1408750:intron 40.0%
GAATGCGTTCCTTCTGAATA+TGG - tig0023416:2983-3002 Msa1408750:intron 40.0%
ATCACAAAACTTACCTTGCG+AGG + tig0023416:3098-3117 None:intergenic 40.0%
CATTGTAGATTGTACGGATG+TGG + tig0023416:3202-3221 None:intergenic 40.0%
CAATCTACAATGCCTCAACA+AGG - tig0023416:3210-3229 Msa1408750:intron 40.0%
ATGCCTCAACAAGGATAATG+AGG - tig0023416:3219-3238 Msa1408750:CDS 40.0%
ACGGTGTGATGTTATTCCAA+TGG - tig0023416:3303-3322 Msa1408750:CDS 40.0%
TGAATGTGGCAAGTATCCAT+TGG + tig0023416:3322-3341 None:intergenic 40.0%
GATACTTGCCACATTCATCT+TGG - tig0023416:3325-3344 Msa1408750:CDS 40.0%
! CTTCACAAAAGTGTGGATGT+TGG + tig0023416:3395-3414 None:intergenic 40.0%
! CAACATCCACACTTTTGTGA+AGG - tig0023416:3393-3412 Msa1408750:intron 40.0%
TCACATCCTTCACAAAAGTG+TGG + tig0023416:3402-3421 None:intergenic 40.0%
AAAGAGGAGTTCAAGCTACT+TGG - tig0023416:3469-3488 Msa1408750:intron 40.0%
TTCTCCTTGAATGGTTCCTT+TGG + tig0023416:3505-3524 None:intergenic 40.0%
TCAATAGTAACATCCTCCCA+AGG + tig0023416:3565-3584 None:intergenic 40.0%
AATTCTCTATCATTCTCCCC+GGG + tig0023416:3726-3745 None:intergenic 40.0%
ACTGAATATTCAGTTACCGG+TGG - tig0023416:325-344 Msa1408750:intron 40.0%
AGCTGAGTCAGATTATAGTG+CGG - tig0023416:571-590 Msa1408750:intron 40.0%
AAATATGACCTGACAAGCAC+GGG - tig0023416:664-683 Msa1408750:intron 40.0%
TGTCAACTAGCTATGAAGCA+TGG + tig0023416:785-804 None:intergenic 40.0%
GGTCATACGAGCTTATAAGT+TGG - tig0023416:937-956 Msa1408750:intron 40.0%
! AAATCTGGTTCAGGGACAAA+AGG + tig0023416:1698-1717 None:intergenic 40.0%
! TTTTGTCCCTGAACCAGATT+TGG - tig0023416:1697-1716 Msa1408750:intron 40.0%
!!! AGTGAGTTTTCAAGTGAGCA+AGG - tig0023416:1776-1795 Msa1408750:intron 40.0%
CGCAAAGTGATGTTTCACAA+AGG + tig0023416:1807-1826 None:intergenic 40.0%
!!! TGAGTTTTCAAGTGAGAGCA+AGG - tig0023416:1887-1906 Msa1408750:intron 40.0%
!!! TTTTTGGGTGAAGATTGTGG+CGG + tig0023416:1986-2005 None:intergenic 40.0%
!! TCTAGGTGGCATTTTGACAA+TGG + tig0023416:2035-2054 None:intergenic 40.0%
! CTTTCGTTTTGTCTTCTAGG+TGG + tig0023416:2049-2068 None:intergenic 40.0%
GCGACAAATTCAACTACTAC+AGG - tig0023416:2102-2121 Msa1408750:intron 40.0%
AGATGATGAAGAGTCACTAC+CGG + tig0023416:2191-2210 None:intergenic 40.0%
! TCTACAACCGGATGATTTTC+TGG - tig0023416:2285-2304 Msa1408750:intron 40.0%
! AACCGGATGATTTTCTGGAT+TGG - tig0023416:2290-2309 Msa1408750:intron 40.0%
TGAAGCATGTTTCTTCAGCT+TGG + tig0023416:2386-2405 None:intergenic 40.0%
!!! ATGATTTTTGGTGGGGAAAG+AGG + tig0023416:6656-6675 None:intergenic 40.0%
!! GAATGAGGAAATAGGTTGGT+GGG + tig0023416:2616-2635 None:intergenic 40.0%
! TGAATGAGGAAATAGGTTGG+TGG + tig0023416:2617-2636 None:intergenic 40.0%
TGGGGTTTGAATGAGGAAAT+AGG + tig0023416:2624-2643 None:intergenic 40.0%
! TGTTTCAAGTGTCAAGGGTA+TGG - tig0023416:2684-2703 Msa1408750:CDS 40.0%
AGTATTCACCATCGTCAATG+AGG - tig0023416:2736-2755 Msa1408750:CDS 40.0%
GTTTATCTCCTCATTGACGA+TGG + tig0023416:2747-2766 None:intergenic 40.0%
ATCATTTGAAGATGAGACGC+TGG - tig0023416:2802-2821 Msa1408750:intron 40.0%
TCATTTGAAGATGAGACGCT+GGG - tig0023416:2803-2822 Msa1408750:intron 40.0%
! TGTGAAGTGTTTGAAGAAGG+GGG - tig0023416:2866-2885 Msa1408750:intron 40.0%
!! TCATGAAGTGTTGGAACAAG+AGG - tig0023416:2934-2953 Msa1408750:intron 40.0%
GAATGCGTTCCTTCTGAATA+TGG - tig0023416:2983-3002 Msa1408750:intron 40.0%
ATCACAAAACTTACCTTGCG+AGG + tig0023416:3098-3117 None:intergenic 40.0%
CATTGTAGATTGTACGGATG+TGG + tig0023416:3202-3221 None:intergenic 40.0%
CAATCTACAATGCCTCAACA+AGG - tig0023416:3210-3229 Msa1408750:intron 40.0%
ATGCCTCAACAAGGATAATG+AGG - tig0023416:3219-3238 Msa1408750:CDS 40.0%
ACGGTGTGATGTTATTCCAA+TGG - tig0023416:3303-3322 Msa1408750:CDS 40.0%
TGAATGTGGCAAGTATCCAT+TGG + tig0023416:3322-3341 None:intergenic 40.0%
GATACTTGCCACATTCATCT+TGG - tig0023416:3325-3344 Msa1408750:CDS 40.0%
! CTTCACAAAAGTGTGGATGT+TGG + tig0023416:3395-3414 None:intergenic 40.0%
! CAACATCCACACTTTTGTGA+AGG - tig0023416:3393-3412 Msa1408750:intron 40.0%
TCACATCCTTCACAAAAGTG+TGG + tig0023416:3402-3421 None:intergenic 40.0%
AAAGAGGAGTTCAAGCTACT+TGG - tig0023416:3469-3488 Msa1408750:intron 40.0%
TTCTCCTTGAATGGTTCCTT+TGG + tig0023416:3505-3524 None:intergenic 40.0%
TCAATAGTAACATCCTCCCA+AGG + tig0023416:3565-3584 None:intergenic 40.0%
AATTCTCTATCATTCTCCCC+GGG + tig0023416:3726-3745 None:intergenic 40.0%
AATTGCATGTTATATGGGCC+TGG - tig0023416:8687-8706 Msa1408750:CDS 40.0%
! GATAAAACGTTTTGCCGATG+GGG - tig0023416:8726-8745 Msa1408750:CDS 40.0%
TTGGACATATATCTCCCCAT+CGG + tig0023416:8743-8762 None:intergenic 40.0%
TCCATAAGATTCTCATTCGC+GGG + tig0023416:8820-8839 None:intergenic 40.0%
CTCCATAAGATTCTCATTCG+CGG + tig0023416:8821-8840 None:intergenic 40.0%
TAGCTAGCGGTTATCAGTAA+TGG + tig0023416:9259-9278 None:intergenic 40.0%
AACGCAAATGAAGTAGCTAG+CGG + tig0023416:9272-9291 None:intergenic 40.0%
TCCCAAAAGCTTAACCTGTT+GGG - tig0023416:9350-9369 Msa1408750:intron 40.0%
! ACCCAACAGGTTAAGCTTTT+GGG + tig0023416:9354-9373 None:intergenic 40.0%
! AACCCAACAGGTTAAGCTTT+TGG + tig0023416:9355-9374 None:intergenic 40.0%
AAGCTTAACCTGTTGGGTTA+AGG - tig0023416:9356-9375 Msa1408750:intron 40.0%
TGGTCTAATCACTAATGCCT+TGG + tig0023416:9598-9617 None:intergenic 40.0%
AGATGCATGTAGAACGTGAT+TGG + tig0023416:9618-9637 None:intergenic 40.0%
CAACTACTGTTTCAGACTCA+AGG - tig0023416:9776-9795 Msa1408750:intron 40.0%
TGTCCATACACATGATCAAC+TGG + tig0023416:9914-9933 None:intergenic 40.0%
AGTTGATCATGTGTATGGAC+AGG - tig0023416:9913-9932 Msa1408750:intron 40.0%
AAACATTCTTACCCCCATTC+AGG - tig0023416:10224-10243 Msa1408750:intron 40.0%
GCAAGGTAATCGAGTATAAC+AGG + tig0023416:10354-10373 None:intergenic 40.0%
! AACAAATAGTCTTGCTGGCA+AGG + tig0023416:10371-10390 None:intergenic 40.0%
AAAAGGAAAGGTAGCAGTGA+TGG - tig0023416:10685-10704 Msa1408750:intron 40.0%
GATGACATGATTGATACTGC+TGG - tig0023416:10710-10729 Msa1408750:intron 40.0%
TGTCTCTATGACCCTTAGAT+CGG - tig0023416:10777-10796 Msa1408750:intron 40.0%
TGTATTTCCATGTGCAATGC+AGG - tig0023416:11195-11214 Msa1408750:intron 40.0%
ATAACATCCTGCATTGCACA+TGG + tig0023416:11205-11224 None:intergenic 40.0%
GATGCCTTAAAACTGTGTCA+AGG + tig0023416:11316-11335 None:intergenic 40.0%
!! GTGCATTGCACTCTAAAGTT+TGG + tig0023416:11542-11561 None:intergenic 40.0%
AAACATGATGGTTGCTTCCT+TGG - tig0023416:11622-11641 Msa1408750:intron 40.0%
AATTCTCTCTTGCTACAGCT+TGG - tig0023416:11742-11761 Msa1408750:intron 40.0%
! CAGCTCTTTTGCATCAAGAA+GGG - tig0023416:11836-11855 Msa1408750:intron 40.0%
! AGCTCTTTTGCATCAAGAAG+GGG - tig0023416:11837-11856 Msa1408750:intron 40.0%
! AATTTGTGGTTTGTGCTGCT+AGG - tig0023416:11937-11956 Msa1408750:intron 40.0%
! GAGAGTGTGTTAAGTATGTC+TGG - tig0023416:12069-12088 Msa1408750:intron 40.0%
ACAATCTCTCTATAGCAGGA+GGG + tig0023416:12291-12310 None:intergenic 40.0%
CTTGACAATCTCTCTATAGC+AGG + tig0023416:12295-12314 None:intergenic 40.0%
GCTATAGAGAGATTGTCAAG+CGG - tig0023416:12295-12314 Msa1408750:intron 40.0%
AAGTAGTTCTTCTCTGCTAG+TGG + tig0023416:12355-12374 None:intergenic 40.0%
CTTATCAGTAGCAAACCTTC+TGG - tig0023416:12390-12409 Msa1408750:intron 40.0%
! CTGTTTTATCTTTGTCAGGG+TGG - tig0023416:12809-12828 Msa1408750:CDS 40.0%
GTTACTGCAGTATCATAAGC+TGG + tig0023416:12898-12917 None:intergenic 40.0%
GATACTGCAGTAACAAGAAG+TGG - tig0023416:12904-12923 Msa1408750:intron 40.0%
TACCCAAACAGCTCTCTAAA+AGG + tig0023416:12979-12998 None:intergenic 40.0%
ATTCGGAAGGAGGATTAGGT+GGG + tig0023416:28-47 None:intergenic 45.0%
AATTCGGAAGGAGGATTAGG+TGG + tig0023416:29-48 None:intergenic 45.0%
GTTACGCTAAATTCGGAAGG+AGG + tig0023416:38-57 None:intergenic 45.0%
ACGGTTACGCTAAATTCGGA+AGG + tig0023416:41-60 None:intergenic 45.0%
GAGAGAGTTACTTACGACGA+CGG + tig0023416:184-203 None:intergenic 45.0%
CGGAATTGAACTTGTACCAC+CGG + tig0023416:344-363 None:intergenic 45.0%
TTTGGCGCCACTAGATAACT+CGG + tig0023416:364-383 None:intergenic 45.0%
AGTCAGATTATAGTGCGGTG+CGG - tig0023416:576-595 Msa1408750:intron 45.0%
CTATTAGGCTCAGTTTGGCA+AGG + tig0023416:963-982 None:intergenic 45.0%
GAATGTGCCTAAACACTTGG+TGG + tig0023416:1593-1612 None:intergenic 45.0%
TGGTTCAGGGACAAAAGGAA+AGG + tig0023416:1693-1712 None:intergenic 45.0%
! CTGATGCCAAATCTGGTTCA+GGG + tig0023416:1706-1725 None:intergenic 45.0%
! TCTGATGCCAAATCTGGTTC+AGG + tig0023416:1707-1726 None:intergenic 45.0%
TTCGCTTAAACTCAACTCCG+AGG + tig0023416:1743-1762 None:intergenic 45.0%
! GTGTTAGCTTCGCGAACAAA+TGG + tig0023416:1942-1961 None:intergenic 45.0%
!! GGTGGCATTTTGACAATGGT+GGG + tig0023416:2031-2050 None:intergenic 45.0%
!! AGGTGGCATTTTGACAATGG+TGG + tig0023416:2032-2051 None:intergenic 45.0%
! CAACGTCCAACAAGCCTTAT+TGG - tig0023416:2132-2151 Msa1408750:intron 45.0%
GTGCTTCCAATAAGGCTTGT+TGG + tig0023416:2141-2160 None:intergenic 45.0%
GAAGAGCAAGATCAAGACGT+GGG - tig0023416:2447-2466 Msa1408750:CDS 45.0%
!!! TGATTTTTGGTGGGGGAAAG+AGG + tig0023416:2570-2589 None:intergenic 45.0%
!! GAAATAGGTTGGTGGGTTAG+TGG + tig0023416:2609-2628 None:intergenic 45.0%
! AGTGTTGGAACAAGAGGAGA+AGG - tig0023416:2940-2959 Msa1408750:intron 45.0%
AAACTTACCTTGCGAGGTGT+TGG + tig0023416:3092-3111 None:intergenic 45.0%
GCATGACGATCATATTGCCA+AGG + tig0023416:3355-3374 None:intergenic 45.0%
ACTTGGACTTTCGCTTCCAA+AGG - tig0023416:3486-3505 Msa1408750:intron 45.0%
GCTTCCAAAGGAACCATTCA+AGG - tig0023416:3498-3517 Msa1408750:intron 45.0%
TCCAATTCCTAAGCCACCTT+GGG - tig0023416:3546-3565 Msa1408750:intron 45.0%
ATAGTAACATCCTCCCAAGG+TGG + tig0023416:3562-3581 None:intergenic 45.0%
GAATGTGCCTAAACACTTGG+TGG + tig0023416:1593-1612 None:intergenic 45.0%
CGGAATTGAACTTGTACCAC+CGG + tig0023416:344-363 None:intergenic 45.0%
TTTGGCGCCACTAGATAACT+CGG + tig0023416:364-383 None:intergenic 45.0%
AGTCAGATTATAGTGCGGTG+CGG - tig0023416:576-595 Msa1408750:intron 45.0%
CTATTAGGCTCAGTTTGGCA+AGG + tig0023416:963-982 None:intergenic 45.0%
GAATGTGCCTAAACACTTGG+TGG + tig0023416:1593-1612 None:intergenic 45.0%
TGGTTCAGGGACAAAAGGAA+AGG + tig0023416:1693-1712 None:intergenic 45.0%
! CTGATGCCAAATCTGGTTCA+GGG + tig0023416:1706-1725 None:intergenic 45.0%
! TCTGATGCCAAATCTGGTTC+AGG + tig0023416:1707-1726 None:intergenic 45.0%
TTCGCTTAAACTCAACTCCG+AGG + tig0023416:1743-1762 None:intergenic 45.0%
! GTGTTAGCTTCGCGAACAAA+TGG + tig0023416:1942-1961 None:intergenic 45.0%
!! GGTGGCATTTTGACAATGGT+GGG + tig0023416:2031-2050 None:intergenic 45.0%
!! AGGTGGCATTTTGACAATGG+TGG + tig0023416:2032-2051 None:intergenic 45.0%
! CAACGTCCAACAAGCCTTAT+TGG - tig0023416:2132-2151 Msa1408750:intron 45.0%
GTGCTTCCAATAAGGCTTGT+TGG + tig0023416:2141-2160 None:intergenic 45.0%
GAAGAGCAAGATCAAGACGT+GGG - tig0023416:2447-2466 Msa1408750:CDS 45.0%
!! TTTTTGGTGGGGAAAGAGGT+TGG + tig0023416:6652-6671 None:intergenic 45.0%
!! GAAATAGGTTGGTGGGTTAG+TGG + tig0023416:2609-2628 None:intergenic 45.0%
! AGTGTTGGAACAAGAGGAGA+AGG - tig0023416:2940-2959 Msa1408750:intron 45.0%
AAACTTACCTTGCGAGGTGT+TGG + tig0023416:3092-3111 None:intergenic 45.0%
GCATGACGATCATATTGCCA+AGG + tig0023416:3355-3374 None:intergenic 45.0%
ACTTGGACTTTCGCTTCCAA+AGG - tig0023416:3486-3505 Msa1408750:intron 45.0%
GCTTCCAAAGGAACCATTCA+AGG - tig0023416:3498-3517 Msa1408750:intron 45.0%
TCCAATTCCTAAGCCACCTT+GGG - tig0023416:3546-3565 Msa1408750:intron 45.0%
ATAGTAACATCCTCCCAAGG+TGG + tig0023416:3562-3581 None:intergenic 45.0%
GAATGTGCCTAAACACTTGG+TGG + tig0023416:1593-1612 None:intergenic 45.0%
! AAGCACTTGACAGTGGGTTT+GGG + tig0023416:8465-8484 None:intergenic 45.0%
! TAAGCACTTGACAGTGGGTT+TGG + tig0023416:8466-8485 None:intergenic 45.0%
TGGTCTAAGCACTTGACAGT+GGG + tig0023416:8471-8490 None:intergenic 45.0%
ATGTTATATGGGCCTGGATC+TGG - tig0023416:8693-8712 Msa1408750:CDS 45.0%
TGTTATATGGGCCTGGATCT+GGG - tig0023416:8694-8713 Msa1408750:CDS 45.0%
ATAAGATTCTCATTCGCGGG+AGG + tig0023416:8817-8836 None:intergenic 45.0%
TCCCGCGAATGAGAATCTTA+TGG - tig0023416:8816-8835 Msa1408750:intron 45.0%
TCGTAATGATTGATGCCTGC+AGG - tig0023416:8845-8864 Msa1408750:intron 45.0%
! CGGTTATCAGTAATGGAGCA+TGG + tig0023416:9252-9271 None:intergenic 45.0%
CTCCCAAAAGCTTAACCTGT+TGG - tig0023416:9349-9368 Msa1408750:intron 45.0%
TACATGAGCCTTAACCCAAC+AGG + tig0023416:9367-9386 None:intergenic 45.0%
TCAACTCGGAAATGAGAGTG+CGG + tig0023416:9392-9411 None:intergenic 45.0%
GGTAATCGAGTATAACAGGC+TGG + tig0023416:10350-10369 None:intergenic 45.0%
ATAGTTGTCTCGCCAGATGT+TGG - tig0023416:10402-10421 Msa1408750:intron 45.0%
!! GTTTTGAGCCACCGATCTAA+GGG + tig0023416:10791-10810 None:intergenic 45.0%
AGCGGATCACTGATAAGACT+TGG + tig0023416:11773-11792 None:intergenic 45.0%
TCTTATAGGGACCATCGCAA+AGG - tig0023416:11811-11830 Msa1408750:intron 45.0%
! GCAGCTCTTTTGCATCAAGA+AGG - tig0023416:11835-11854 Msa1408750:intron 45.0%
AAGTATGTCTGGGTACGAGT+TGG - tig0023416:12080-12099 Msa1408750:intron 45.0%
GACAATCTCTCTATAGCAGG+AGG + tig0023416:12292-12311 None:intergenic 45.0%
TCGATGCCCAAACTGGAATA+AGG + tig0023416:12842-12861 None:intergenic 45.0%
TGTTCAATCGATGCCCAAAC+TGG + tig0023416:12849-12868 None:intergenic 45.0%
TAAGCTGGAACAGCAGAACA+TGG + tig0023416:12883-12902 None:intergenic 45.0%
!! TTTCAAAAAATAAAATAAAA+TGG + tig0023416:1053-1072 None:intergenic 5.0%
!! TTTCAAAAAATAAAATAAAA+TGG + tig0023416:1053-1072 None:intergenic 5.0%
!!! AACTATAATATATTTTTTAT+TGG - tig0023416:8959-8978 Msa1408750:intron 5.0%
!!! AAAAAATAAATATATTTTTC+TGG + tig0023416:9454-9473 None:intergenic 5.0%
AGGGAGAAACGAGGAGTGAT+AGG + tig0023416:147-166 None:intergenic 50.0%
AGAGTTACTTACGACGACGG+CGG + tig0023416:181-200 None:intergenic 50.0%
TATGAAGCATGGACCCTCCT+CGG + tig0023416:774-793 None:intergenic 50.0%
AGGCTCACCACCAAGTGTTT+AGG - tig0023416:1583-1602 Msa1408750:intron 50.0%
ACCAGATTTGGCATCAGAGC+TGG - tig0023416:1709-1728 Msa1408750:intron 50.0%
! ACCAGCTCTGATGCCAAATC+TGG + tig0023416:1713-1732 None:intergenic 50.0%
CAGAGCTGGTTACGATACCT+CGG - tig0023416:1723-1742 Msa1408750:intron 50.0%
!! GTGCGTGGTTGTTTTGTTGG+TGG + tig0023416:1964-1983 None:intergenic 50.0%
TTCACAACGATGCCACCTTC+AGG - tig0023416:2222-2241 Msa1408750:intron 50.0%
GGAAGAGCAAGATCAAGACG+TGG - tig0023416:2446-2465 Msa1408750:CDS 50.0%
AGACGTGGGACAAAATGCGT+CGG - tig0023416:2461-2480 Msa1408750:CDS 50.0%
! TTTTGGTGGGGGAAAGAGGT+TGG + tig0023416:2566-2585 None:intergenic 50.0%
CTTGCCACATTCATCTTGGG+AGG - tig0023416:3329-3348 Msa1408750:CDS 50.0%
AAGGCCTCCCAAGATGAATG+TGG + tig0023416:3336-3355 None:intergenic 50.0%
ACATTCATCTTGGGAGGCCT+TGG - tig0023416:3335-3354 Msa1408750:CDS 50.0%
GTCCAATTCCTAAGCCACCT+TGG - tig0023416:3545-3564 Msa1408750:intron 50.0%
TCCCAAGGTGGCTTAGGAAT+TGG + tig0023416:3550-3569 None:intergenic 50.0%
AATTCCTAAGCCACCTTGGG+AGG - tig0023416:3549-3568 Msa1408750:intron 50.0%
AGGCTCACCACCAAGTGTTT+AGG - tig0023416:1583-1602 Msa1408750:intron 50.0%
TGGCTCAGGGACAAAAGGAA+AGG + tig0023416:4086-4105 None:intergenic 50.0%
!! TTGGTTTTCTCCTCCAAGGG+TGG + tig0023416:4106-4125 None:intergenic 50.0%
AACGCGAAGAGAGAGAGAGA+GGG + tig0023416:207-226 None:intergenic 50.0%
TATGAAGCATGGACCCTCCT+CGG + tig0023416:774-793 None:intergenic 50.0%
AGGCTCACCACCAAGTGTTT+AGG - tig0023416:1583-1602 Msa1408750:intron 50.0%
ACCAGATTTGGCATCAGAGC+TGG - tig0023416:1709-1728 Msa1408750:intron 50.0%
! ACCAGCTCTGATGCCAAATC+TGG + tig0023416:1713-1732 None:intergenic 50.0%
CAGAGCTGGTTACGATACCT+CGG - tig0023416:1723-1742 Msa1408750:intron 50.0%
!! GTGCGTGGTTGTTTTGTTGG+TGG + tig0023416:1964-1983 None:intergenic 50.0%
TTCACAACGATGCCACCTTC+AGG - tig0023416:2222-2241 Msa1408750:intron 50.0%
GGAAGAGCAAGATCAAGACG+TGG - tig0023416:2446-2465 Msa1408750:CDS 50.0%
AGACGTGGGACAAAATGCGT+CGG - tig0023416:2461-2480 Msa1408750:CDS 50.0%
CTTGCCACATTCATCTTGGG+AGG - tig0023416:3329-3348 Msa1408750:CDS 50.0%
AAGGCCTCCCAAGATGAATG+TGG + tig0023416:3336-3355 None:intergenic 50.0%
ACATTCATCTTGGGAGGCCT+TGG - tig0023416:3335-3354 Msa1408750:CDS 50.0%
GTCCAATTCCTAAGCCACCT+TGG - tig0023416:3545-3564 Msa1408750:intron 50.0%
TCCCAAGGTGGCTTAGGAAT+TGG + tig0023416:3550-3569 None:intergenic 50.0%
AATTCCTAAGCCACCTTGGG+AGG - tig0023416:3549-3568 Msa1408750:intron 50.0%
AGGCTCACCACCAAGTGTTT+AGG - tig0023416:1583-1602 Msa1408750:intron 50.0%
TGGCTCAGGGACAAAAGGAA+AGG + tig0023416:4086-4105 None:intergenic 50.0%
!! TTGGTTTTCTCCTCCAAGGG+TGG + tig0023416:4106-4125 None:intergenic 50.0%
CTGGTCTAAGCACTTGACAG+TGG + tig0023416:8472-8491 None:intergenic 50.0%
!! TCCAACTGCAAGAGAGTGTC+AGG - tig0023416:8758-8777 Msa1408750:CDS 50.0%
!! CCAACTGCAAGAGAGTGTCA+GGG - tig0023416:8759-8778 Msa1408750:CDS 50.0%
!! CAACTGCAAGAGAGTGTCAG+GGG - tig0023416:8760-8779 Msa1408750:CDS 50.0%
!! AACTGCAAGAGAGTGTCAGG+GGG - tig0023416:8761-8780 Msa1408750:CDS 50.0%
!! TTTCTGGCTGAGACAGTCAC+TGG + tig0023416:9438-9457 None:intergenic 50.0%
TTGCATGTGACCTCCACTCT+GGG - tig0023416:9864-9883 Msa1408750:intron 50.0%
CGAGTATAACAGGCTGGTAG+TGG + tig0023416:10344-10363 None:intergenic 50.0%
CTAGCTACACCACCAACATC+TGG + tig0023416:10417-10436 None:intergenic 50.0%
TCATGGGCATAATGTTGCCG+AGG - tig0023416:10497-10516 Msa1408750:intron 50.0%
CTCTATGACCCTTAGATCGG+TGG - tig0023416:10780-10799 Msa1408750:intron 50.0%
!! CGTTTTGAGCCACCGATCTA+AGG + tig0023416:10792-10811 None:intergenic 50.0%
GAGATCCTAATCAGGTACGC+TGG - tig0023416:11147-11166 Msa1408750:intron 50.0%
AAAGAGCTGCTCCTTTGCGA+TGG + tig0023416:11825-11844 None:intergenic 50.0%
!! GCACAACACACGCTGTTTTC+AGG - tig0023416:11878-11897 Msa1408750:intron 50.0%
GTCATCGTGAACACGCCATA+TGG + tig0023416:12422-12441 None:intergenic 50.0%
GAACGCGAAGAGAGAGAGAG+AGG + tig0023416:208-227 None:intergenic 55.0%
GATGATACCTGAGCGAGTGC+GGG + tig0023416:448-467 None:intergenic 55.0%
GGATGATACCTGAGCGAGTG+CGG + tig0023416:449-468 None:intergenic 55.0%
!! GCGGTGCGTGGTTGTTTTGT+TGG + tig0023416:1967-1986 None:intergenic 55.0%
!! CTTGCGAGGTGTTGGAAGTG+TGG + tig0023416:3084-3103 None:intergenic 55.0%
CACACTTCCAACACCTCGCA+AGG - tig0023416:3082-3101 Msa1408750:intron 55.0%
GGTGGCTTAGGAATTGGACG+AGG + tig0023416:3544-3563 None:intergenic 55.0%
ACATCCTCCCAAGGTGGCTT+AGG + tig0023416:3556-3575 None:intergenic 55.0%
AGGACGAGTCTCTTCCAACC+CGG - tig0023416:3705-3724 Msa1408750:intron 55.0%
CTCTATCATTCTCCCCGGGT+TGG + tig0023416:3722-3741 None:intergenic 55.0%
AAGGGTGGCTCAGGGACAAA+AGG + tig0023416:4091-4110 None:intergenic 55.0%
! TTTTGTCCCTGAGCCACCCT+TGG - tig0023416:4090-4109 Msa1408750:intron 55.0%
GAACGCGAAGAGAGAGAGAG+AGG + tig0023416:208-227 None:intergenic 55.0%
GATGATACCTGAGCGAGTGC+GGG + tig0023416:448-467 None:intergenic 55.0%
GGATGATACCTGAGCGAGTG+CGG + tig0023416:449-468 None:intergenic 55.0%
!! GCGGTGCGTGGTTGTTTTGT+TGG + tig0023416:1967-1986 None:intergenic 55.0%
!! CTTGCGAGGTGTTGGAAGTG+TGG + tig0023416:3084-3103 None:intergenic 55.0%
CACACTTCCAACACCTCGCA+AGG - tig0023416:3082-3101 Msa1408750:intron 55.0%
GGTGGCTTAGGAATTGGACG+AGG + tig0023416:3544-3563 None:intergenic 55.0%
ACATCCTCCCAAGGTGGCTT+AGG + tig0023416:3556-3575 None:intergenic 55.0%
AGGACGAGTCTCTTCCAACC+CGG - tig0023416:3705-3724 Msa1408750:intron 55.0%
CTCTATCATTCTCCCCGGGT+TGG + tig0023416:3722-3741 None:intergenic 55.0%
AAGGGTGGCTCAGGGACAAA+AGG + tig0023416:4091-4110 None:intergenic 55.0%
! TTTTGTCCCTGAGCCACCCT+TGG - tig0023416:4090-4109 Msa1408750:intron 55.0%
CCCTGACACTCTCTTGCAGT+TGG + tig0023416:8762-8781 None:intergenic 55.0%
TCATTCGCGGGAGGACATGT+AGG + tig0023416:8808-8827 None:intergenic 55.0%
TTTGGCAGAAGCTCTCCTGC+AGG + tig0023416:8863-8882 None:intergenic 55.0%
CTTGCATGTGACCTCCACTC+TGG - tig0023416:9863-9882 Msa1408750:intron 55.0%
CTCCACTCTGGGCAGTCTAT+GGG - tig0023416:9875-9894 Msa1408750:intron 55.0%
GTTGTCTCGCCAGATGTTGG+TGG - tig0023416:10405-10424 Msa1408750:intron 55.0%
CAGGTCCAGCGTACCTGATT+AGG + tig0023416:11155-11174 None:intergenic 55.0%
ATCTCCAGCACAGCCTTGAC+AGG + tig0023416:11174-11193 None:intergenic 55.0%
ACCTTCTGGGCGAGACCATA+TGG - tig0023416:12404-12423 Msa1408750:intron 55.0%
GTTACTTACGACGACGGCGG+CGG + tig0023416:178-197 None:intergenic 60.0%
TACCTGAGCGAGTGCGGGAT+TGG + tig0023416:443-462 None:intergenic 60.0%
TGTCAGTGCCCGTGCTTGTC+AGG + tig0023416:675-694 None:intergenic 60.0%
ACACCGACACGTCTAAGCCG+AGG - tig0023416:754-773 Msa1408750:CDS 60.0%
CCTCCTCGGCTTAGACGTGT+CGG + tig0023416:760-779 None:intergenic 60.0%
CGACACGTCTAAGCCGAGGA+GGG - tig0023416:758-777 Msa1408750:CDS 60.0%
GTGAAGATTGTGGCGGTGCG+TGG + tig0023416:1979-1998 None:intergenic 60.0%
GGACGAGTCTCTTCCAACCC+GGG - tig0023416:3706-3725 Msa1408750:intron 60.0%
GACGAGTCTCTTCCAACCCG+GGG - tig0023416:3707-3726 Msa1408750:intron 60.0%
TCTCCTCCAAGGGTGGCTCA+GGG + tig0023416:4099-4118 None:intergenic 60.0%
TTCTCCTCCAAGGGTGGCTC+AGG + tig0023416:4100-4119 None:intergenic 60.0%
TACCTGAGCGAGTGCGGGAT+TGG + tig0023416:443-462 None:intergenic 60.0%
TGTCAGTGCCCGTGCTTGTC+AGG + tig0023416:675-694 None:intergenic 60.0%
ACACCGACACGTCTAAGCCG+AGG - tig0023416:754-773 Msa1408750:CDS 60.0%
CCTCCTCGGCTTAGACGTGT+CGG + tig0023416:760-779 None:intergenic 60.0%
CGACACGTCTAAGCCGAGGA+GGG - tig0023416:758-777 Msa1408750:CDS 60.0%
GTGAAGATTGTGGCGGTGCG+TGG + tig0023416:1979-1998 None:intergenic 60.0%
GGACGAGTCTCTTCCAACCC+GGG - tig0023416:3706-3725 Msa1408750:intron 60.0%
GACGAGTCTCTTCCAACCCG+GGG - tig0023416:3707-3726 Msa1408750:intron 60.0%
TCTCCTCCAAGGGTGGCTCA+GGG + tig0023416:4099-4118 None:intergenic 60.0%
TTCTCCTCCAAGGGTGGCTC+AGG + tig0023416:4100-4119 None:intergenic 60.0%
CCATAGACTGCCCAGAGTGG+AGG + tig0023416:9877-9896 None:intergenic 60.0%
CCTCCACTCTGGGCAGTCTA+TGG - tig0023416:9874-9893 Msa1408750:intron 60.0%
AGCCCATAGACTGCCCAGAG+TGG + tig0023416:9880-9899 None:intergenic 60.0%
CAGGTACGCTGGACCTGTCA+AGG - tig0023416:11158-11177 Msa1408750:intron 60.0%
TGGACCTGTCAAGGCTGTGC+TGG - tig0023416:11167-11186 Msa1408750:intron 60.0%
GCCATATGGTCTCGCCCAGA+AGG + tig0023416:12408-12427 None:intergenic 60.0%
GCGTTGCGGAGGGAGAAACG+AGG + tig0023416:156-175 None:intergenic 65.0%
CTGAGCGAGTGCGGGATTGG+CGG + tig0023416:440-459 None:intergenic 65.0%
CCGACACGTCTAAGCCGAGG+AGG - tig0023416:757-776 Msa1408750:CDS 65.0%
TGTCCCTGAGCCACCCTTGG+AGG - tig0023416:4093-4112 Msa1408750:intron 65.0%
CTGAGCGAGTGCGGGATTGG+CGG + tig0023416:440-459 None:intergenic 65.0%
CCGACACGTCTAAGCCGAGG+AGG - tig0023416:757-776 Msa1408750:CDS 65.0%
TGTCCCTGAGCCACCCTTGG+AGG - tig0023416:4093-4112 Msa1408750:intron 65.0%
CGCCAATCCCGCACTCGCTC+AGG - tig0023416:438-457 Msa1408750:intron 70.0%
CGCCAATCCCGCACTCGCTC+AGG - tig0023416:438-457 Msa1408750:intron 70.0%
! GACGGCGGCGGCGTTGCGGA+GGG + tig0023416:166-185 None:intergenic 80.0%
! CGACGACGGCGGCGGCGTTG+CGG + tig0023416:170-189 None:intergenic 80.0%
! CGACGGCGGCGGCGTTGCGG+AGG + tig0023416:167-186 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
tig0023416 gene 1 13152 1 ID=Msa1408750;Name=Msa1408750
tig0023416 mRNA 1 13152 1 ID=Msa1408750-mRNA-1;Parent=Msa1408750;Name=Msa1408750-mRNA-1;_AED=0.19;_eAED=0.19;_QI=92|0.88|0.9|1|1|1|10|287|464
tig0023416 exon 1 326 1 ID=Msa1408750-mRNA-1:exon:25748;Parent=Msa1408750-mRNA-1
tig0023416 exon 706 865 706 ID=Msa1408750-mRNA-1:exon:25747;Parent=Msa1408750-mRNA-1
tig0023416 exon 1254 1334 1254 ID=Msa1408750-mRNA-1:exon:25746;Parent=Msa1408750-mRNA-1
tig0023416 exon 2418 2491 2418 ID=Msa1408750-mRNA-1:exon:25745;Parent=Msa1408750-mRNA-1
tig0023416 exon 2635 2802 2635 ID=Msa1408750-mRNA-1:exon:25744;Parent=Msa1408750-mRNA-1
tig0023416 exon 3219 3362 3219 ID=Msa1408750-mRNA-1:exon:25743;Parent=Msa1408750-mRNA-1
tig0023416 exon 4220 4468 4220 ID=Msa1408750-mRNA-1:exon:25742;Parent=Msa1408750-mRNA-1
tig0023416 exon 8610 8801 8610 ID=Msa1408750-mRNA-1:exon:25741;Parent=Msa1408750-mRNA-1
tig0023416 exon 12694 12885 12694 ID=Msa1408750-mRNA-1:exon:25740;Parent=Msa1408750-mRNA-1
tig0023416 exon 12965 13152 12965 ID=Msa1408750-mRNA-1:exon:25739;Parent=Msa1408750-mRNA-1
tig0023416 five_prime_UTR 13061 13152 13061 ID=Msa1408750-mRNA-1:five_prime_utr;Parent=Msa1408750-mRNA-1
tig0023416 CDS 12965 13060 12965 ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1
tig0023416 CDS 12694 12885 12694 ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1
tig0023416 CDS 8610 8801 8610 ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1
tig0023416 CDS 4220 4468 4220 ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1
tig0023416 CDS 3219 3362 3219 ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1
tig0023416 CDS 2635 2802 2635 ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1
tig0023416 CDS 2418 2491 2418 ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1
tig0023416 CDS 1254 1334 1254 ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1
tig0023416 CDS 706 865 706 ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1
tig0023416 CDS 288 326 288 ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1
tig0023416 three_prime_UTR 1 287 1 ID=Msa1408750-mRNA-1:three_prime_utr;Parent=Msa1408750-mRNA-1
Gene Sequence

>Msa1408750

ATGTCCACTCTACTTCAATCTTCTTTCATTTCTTCTTCGTCTTCATTCTCTCCTATCACTCCTCGTTTCTCCCTCCGCAACGCCGCCGCCGTCGTCAGATGTAATAATGTAGTACAATCTGTCAATCTGGAAAACGGAAAACCGTACCGTTCAACTGAATATTCAGTTACCGGTGGTACAAGTTCAATTCCGAGTTATCTAGTGGCGCCAAACACTCGTATTCATGATCTCGTTAACAAGAATCGTCTTCGTATTTTCTCTGGCACCGCCAATCCCGCACTCGCTCAGAGATGTAATAATGTAGTACAATCTGTCAATCTGGAAAACGGAAAACCGTACCGTTCAACTGAATATTCAGTTACCGGTGGTACAAGTTCAATTCCGAGTTATCTAGTGGCGCCAAACACTCGTATTCATGATCTCGTTAACAAGAATCGTCTTCGTATTTTCTCTGGCACCGCCAATCCCGCACTCGCTCAGGAAATTGCATGTTATATGGGCCTGGATCTGGGAAAAATTAAGATAAAACGTTTTGCCGATGGGGAGATATATGTCCAACTGCAAGAGAGTGTCAGGGGGTGTGATGTGTTTCTTGTGCAGCCTACATGTCCTCCCGCGAATGAGAATCTTATGGAGCTTCTCGTAATGATTGATGCCTGCAGGAGAGCTTCTGCCAAAAATATTACTGCAGTCATTCCATATTTTGGATATGCTAGAGCTGATAGAAAGACTCAAGGGCGTGAATCAATTGCTGCTAAGCTTGTAGCAAATTTAATTACAGAAGCTGGTGCAAATCGTGTTCTTGCATGTGACCTCCACTCTGGGCAGTCTATGGGCTACTTCGATATTCCAGTTGATCATGTGTATGGACAGCCTGTTATACTCGATTACCTTGCCAGCAAGACTATTTGTTCAGATGATTTGATAGTTGTCTCGCCAGATGTTGGTGGTGTAGCTAGAGCACGTGCTTTTGCCAAAAAGTTATCTGATGCTCCTTTAGCAATTGTTGATAAAAGACGTCATGGGCATAATGTTGCCGAGGTGATGAATTTGATTGGTGATGTAAAAGGAAAGGTAGCAGTGATGGTAGATGACATGATTGATACTGCTGGTAAGGACCATCGCAAAGGAGCAGCTCTTTTGCATCAAGAAGGGGCAAGAGAAGTCTATGCATGCACAACACACGCTGTTTTCAGCCCTCCTGCTATAGAGAGATTGTCAAGCGGTTTATTTCAAGAAGTTATCATAACTAATACAATTCCACTAGCAGAGAAGAACTACTTCCCCCAATTAACTGTCTTATCAGTAGCAAACCTTCTGGGCGAGACCATATGGCGTGTTCACGATGACTGCTCAGGTGGAATTGAACCTTATTCCAGTTTGGGCATCGATTGA

Protein sequence

>Msa1408750

MSTLLQSSFISSSSSFSPITPRFSLRNAAAVVRCNNVVQSVNLENGKPYRSTEYSVTGGTSSIPSYLVAPNTRIHDLVNKNRLRIFSGTANPALAQRCNNVVQSVNLENGKPYRSTEYSVTGGTSSIPSYLVAPNTRIHDLVNKNRLRIFSGTANPALAQEIACYMGLDLGKIKIKRFADGEIYVQLQESVRGCDVFLVQPTCPPANENLMELLVMIDACRRASAKNITAVIPYFGYARADRKTQGRESIAAKLVANLITEAGANRVLACDLHSGQSMGYFDIPVDHVYGQPVILDYLASKTICSDDLIVVSPDVGGVARARAFAKKLSDAPLAIVDKRRHGHNVAEVMNLIGDVKGKVAVMVDDMIDTAGKDHRKGAALLHQEGAREVYACTTHAVFSPPAIERLSSGLFQEVIITNTIPLAEKNYFPQLTVLSVANLLGETIWRVHDDCSGGIEPYSSLGID*