Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1408750 | XP_013443961.1 | 95.918 | 98 | 2 | 2 | 1 | 97 | 1 | 97 | 2.83e-48 | 181 |
Msa1408750 | XP_013443961.1 | 97.849 | 372 | 7 | 1 | 93 | 464 | 29 | 399 | 0.0 | 751 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1408750 | sp|O64888|KPRS5_ARATH | 91.239 | 331 | 26 | 2 | 136 | 464 | 65 | 394 | 0.0 | 624 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1408750 | A0A072TMC4 | 95.918 | 98 | 2 | 2 | 1 | 97 | 1 | 97 | 1.35e-48 | 181 |
Msa1408750 | A0A072TMC4 | 97.849 | 372 | 7 | 1 | 93 | 464 | 29 | 399 | 0.0 | 751 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0027090 | Msa1408750 | 0.806208 | 9.197012e-50 | -8.615850e-47 |
Msa0035050 | Msa1408750 | 0.808495 | 3.012222e-50 | -8.615850e-47 |
Msa0037040 | Msa1408750 | 0.823410 | 1.405918e-53 | -8.615850e-47 |
Msa0037780 | Msa1408750 | 0.846121 | 2.650165e-59 | -8.615850e-47 |
Msa0039140 | Msa1408750 | 0.856838 | 2.454714e-62 | -8.615850e-47 |
Msa0046020 | Msa1408750 | 0.821959 | 3.058799e-53 | -8.615850e-47 |
Msa0081400 | Msa1408750 | 0.868967 | 4.402256e-66 | -8.615850e-47 |
Msa0081440 | Msa1408750 | 0.854729 | 1.013704e-61 | -8.615850e-47 |
Msa0089700 | Msa1408750 | 0.808211 | 3.461933e-50 | -8.615850e-47 |
Msa0093950 | Msa1408750 | 0.815267 | 1.009234e-51 | -8.615850e-47 |
Msa0094170 | Msa1408750 | 0.814423 | 1.552591e-51 | -8.615850e-47 |
Msa0112550 | Msa1408750 | 0.807191 | 5.702191e-50 | -8.615850e-47 |
Msa0112880 | Msa1408750 | 0.835320 | 1.797548e-56 | -8.615850e-47 |
Msa0116780 | Msa1408750 | 0.807089 | 5.992981e-50 | -8.615850e-47 |
Msa0118700 | Msa1408750 | 0.819762 | 9.797486e-53 | -8.615850e-47 |
Msa0120100 | Msa1408750 | 0.805826 | 1.106755e-49 | -8.615850e-47 |
Msa0120160 | Msa1408750 | 0.805916 | 1.059249e-49 | -8.615850e-47 |
Msa1345540 | Msa1408750 | 0.808243 | 3.408859e-50 | -8.615850e-47 |
Msa1348180 | Msa1408750 | 0.813008 | 3.180306e-51 | -8.615850e-47 |
Msa1350130 | Msa1408750 | 0.820752 | 5.810998e-53 | -8.615850e-47 |
Msa1360070 | Msa1408750 | 0.806061 | 9.875003e-50 | -8.615850e-47 |
Msa1361670 | Msa1408750 | 0.829534 | 4.878995e-55 | -8.615850e-47 |
Msa1363170 | Msa1408750 | 0.807206 | 5.659268e-50 | -8.615850e-47 |
Msa1367560 | Msa1408750 | 0.866616 | 2.503174e-65 | -8.615850e-47 |
Msa1367690 | Msa1408750 | 0.809770 | 1.605596e-50 | -8.615850e-47 |
Msa1373420 | Msa1408750 | 0.818199 | 2.220674e-52 | -8.615850e-47 |
Msa1375610 | Msa1408750 | 0.812914 | 3.335588e-51 | -8.615850e-47 |
Msa1375970 | Msa1408750 | 0.868181 | 7.898965e-66 | -8.615850e-47 |
Msa1376680 | Msa1408750 | 0.844025 | 9.758972e-59 | -8.615850e-47 |
Msa1381340 | Msa1408750 | 0.804312 | 2.294911e-49 | -8.615850e-47 |
Msa1388010 | Msa1408750 | 0.807547 | 4.791482e-50 | -8.615850e-47 |
Msa1401640 | Msa1408750 | 0.820995 | 5.108941e-53 | -8.615850e-47 |
Msa1407160 | Msa1408750 | 0.810754 | 9.851241e-51 | -8.615850e-47 |
Msa1408750 | Msa1411930 | 0.829247 | 5.728916e-55 | -8.615850e-47 |
Msa1408750 | Msa1424250 | 0.821186 | 4.615627e-53 | -8.615850e-47 |
Msa1408750 | Msa1430570 | 0.802981 | 4.334924e-49 | -8.615850e-47 |
Msa1408750 | Msa1431510 | 0.827924 | 1.195588e-54 | -8.615850e-47 |
Msa1408750 | Msa1440990 | 0.826190 | 3.108025e-54 | -8.615850e-47 |
Msa1408750 | Msa1444130 | 0.802265 | 6.088998e-49 | -8.615850e-47 |
Msa1408750 | Msa1444690 | 0.808154 | 3.559533e-50 | -8.615850e-47 |
Msa1408750 | Msa1452230 | 0.837515 | 4.967136e-57 | -8.615850e-47 |
Msa1408750 | Msa1457390 | 0.859210 | 4.840764e-63 | -8.615850e-47 |
Msa1408750 | Msa1461860 | 0.812059 | 5.129495e-51 | -8.615850e-47 |
Msa0623470 | Msa1408750 | 0.857763 | 1.307522e-62 | -8.615850e-47 |
Msa0628440 | Msa1408750 | 0.819175 | 1.333399e-52 | -8.615850e-47 |
Msa0637930 | Msa1408750 | 0.847965 | 8.282329e-60 | -8.615850e-47 |
Msa0638010 | Msa1408750 | 0.805342 | 1.398104e-49 | -8.615850e-47 |
Msa0644760 | Msa1408750 | 0.800362 | 1.493345e-48 | -8.615850e-47 |
Msa0651000 | Msa1408750 | 0.829228 | 5.789702e-55 | -8.615850e-47 |
Msa0661540 | Msa1408750 | 0.811382 | 7.198033e-51 | -8.615850e-47 |
Msa0677160 | Msa1408750 | 0.810223 | 1.282901e-50 | -8.615850e-47 |
Msa0693050 | Msa1408750 | 0.809915 | 1.494155e-50 | -8.615850e-47 |
Msa0695470 | Msa1408750 | 0.815191 | 1.049019e-51 | -8.615850e-47 |
Msa0752490 | Msa1408750 | 0.842535 | 2.436876e-58 | -8.615850e-47 |
Msa0754880 | Msa1408750 | 0.819250 | 1.281605e-52 | -8.615850e-47 |
Msa0757390 | Msa1408750 | 0.858953 | 5.779389e-63 | -8.615850e-47 |
Msa0762480 | Msa1408750 | 0.819173 | 1.334279e-52 | -8.615850e-47 |
Msa0793130 | Msa1408750 | 0.821515 | 3.875992e-53 | -8.615850e-47 |
Msa0833980 | Msa1408750 | 0.816705 | 4.818640e-52 | -8.615850e-47 |
Msa0842370 | Msa1408750 | 0.818837 | 1.591167e-52 | -8.615850e-47 |
Msa0133140 | Msa1408750 | 0.822900 | 1.849250e-53 | -8.615850e-47 |
Msa0136870 | Msa1408750 | 0.814696 | 1.350750e-51 | -8.615850e-47 |
Msa0138680 | Msa1408750 | 0.846259 | 2.429690e-59 | -8.615850e-47 |
Msa0141770 | Msa1408750 | 0.830248 | 3.268332e-55 | -8.615850e-47 |
Msa0164530 | Msa1408750 | 0.801818 | 7.524268e-49 | -8.615850e-47 |
Msa0173700 | Msa1408750 | 0.844735 | 6.287212e-59 | -8.615850e-47 |
Msa0178840 | Msa1408750 | 0.800503 | 1.397738e-48 | -8.615850e-47 |
Msa0182940 | Msa1408750 | 0.814146 | 1.787612e-51 | -8.615850e-47 |
Msa0187590 | Msa1408750 | 0.842313 | 2.790021e-58 | -8.615850e-47 |
Msa0195810 | Msa1408750 | 0.811112 | 8.240585e-51 | -8.615850e-47 |
Msa0195850 | Msa1408750 | 0.818322 | 2.082314e-52 | -8.615850e-47 |
Msa0199160 | Msa1408750 | 0.800362 | 1.493169e-48 | -8.615850e-47 |
Msa0225790 | Msa1408750 | 0.808959 | 2.396406e-50 | -8.615850e-47 |
Msa0237650 | Msa1408750 | 0.803294 | 3.733415e-49 | -8.615850e-47 |
Msa0237690 | Msa1408750 | 0.817599 | 3.033088e-52 | -8.615850e-47 |
Msa0238530 | Msa1408750 | 0.801933 | 7.127291e-49 | -8.615850e-47 |
Msa1228260 | Msa1408750 | 0.801041 | 1.085583e-48 | -8.615850e-47 |
Msa1229670 | Msa1408750 | 0.825896 | 3.649507e-54 | -8.615850e-47 |
Msa1244430 | Msa1408750 | 0.803526 | 3.342128e-49 | -8.615850e-47 |
Msa1247200 | Msa1408750 | 0.829952 | 3.859603e-55 | -8.615850e-47 |
Msa1252210 | Msa1408750 | 0.802862 | 4.586142e-49 | -8.615850e-47 |
Msa1255480 | Msa1408750 | 0.821656 | 3.595732e-53 | -8.615850e-47 |
Msa1258030 | Msa1408750 | 0.809005 | 2.343449e-50 | -8.615850e-47 |
Msa1266750 | Msa1408750 | 0.811808 | 5.817307e-51 | -8.615850e-47 |
Msa1267390 | Msa1408750 | 0.808274 | 3.356589e-50 | -8.615850e-47 |
Msa1271220 | Msa1408750 | 0.800856 | 1.184372e-48 | -8.615850e-47 |
Msa1298170 | Msa1408750 | 0.831965 | 1.237938e-55 | -8.615850e-47 |
Msa1303690 | Msa1408750 | 0.807766 | 4.306373e-50 | -8.615850e-47 |
Msa1308430 | Msa1408750 | 0.804419 | 2.179757e-49 | -8.615850e-47 |
Msa1310090 | Msa1408750 | 0.822179 | 2.721183e-53 | -8.615850e-47 |
Msa1325560 | Msa1408750 | 0.865709 | 4.850086e-65 | -8.615850e-47 |
Msa1329080 | Msa1408750 | 0.819153 | 1.348446e-52 | -8.615850e-47 |
Msa0367540 | Msa1408750 | 0.805001 | 1.648107e-49 | -8.615850e-47 |
Msa0373120 | Msa1408750 | 0.803997 | 2.668631e-49 | -8.615850e-47 |
Msa0374300 | Msa1408750 | 0.829827 | 4.139273e-55 | -8.615850e-47 |
Msa0377990 | Msa1408750 | 0.801356 | 9.360407e-49 | -8.615850e-47 |
Msa0380270 | Msa1408750 | 0.852942 | 3.314532e-61 | -8.615850e-47 |
Msa0383870 | Msa1408750 | 0.838737 | 2.407881e-57 | -8.615850e-47 |
Msa0384140 | Msa1408750 | 0.804831 | 1.788644e-49 | -8.615850e-47 |
Msa0387630 | Msa1408750 | 0.802313 | 5.952408e-49 | -8.615850e-47 |
Msa0387800 | Msa1408750 | 0.803675 | 3.113582e-49 | -8.615850e-47 |
Msa0415060 | Msa1408750 | 0.802020 | 6.840146e-49 | -8.615850e-47 |
Msa0415160 | Msa1408750 | 0.864676 | 1.024145e-64 | -8.615850e-47 |
Msa0417140 | Msa1408750 | 0.800652 | 1.303547e-48 | -8.615850e-47 |
Msa0419150 | Msa1408750 | 0.806175 | 9.347142e-50 | -8.615850e-47 |
Msa0429490 | Msa1408750 | 0.862516 | 4.793940e-64 | -8.615850e-47 |
Msa0429560 | Msa1408750 | 0.818658 | 1.747109e-52 | -8.615850e-47 |
Msa0433890 | Msa1408750 | 0.804112 | 2.526109e-49 | -8.615850e-47 |
Msa0434830 | Msa1408750 | 0.803889 | 2.810611e-49 | -8.615850e-47 |
Msa0436660 | Msa1408750 | 0.807580 | 4.716801e-50 | -8.615850e-47 |
Msa0437820 | Msa1408750 | 0.822468 | 2.330827e-53 | -8.615850e-47 |
Msa0457600 | Msa1408750 | 0.802140 | 6.462644e-49 | -8.615850e-47 |
Msa0460170 | Msa1408750 | 0.856102 | 4.036318e-62 | -8.615850e-47 |
Msa0463030 | Msa1408750 | 0.806273 | 8.912280e-50 | -8.615850e-47 |
Msa0464980 | Msa1408750 | 0.811297 | 7.512832e-51 | -8.615850e-47 |
Msa0469700 | Msa1408750 | 0.823608 | 1.263898e-53 | -8.615850e-47 |
Msa0478740 | Msa1408750 | 0.827784 | 1.291810e-54 | -8.615850e-47 |
Msa0480040 | Msa1408750 | 0.819505 | 1.121419e-52 | -8.615850e-47 |
Msa0480090 | Msa1408750 | 0.849468 | 3.171018e-60 | -8.615850e-47 |
Msa0993590 | Msa1408750 | 0.806290 | 8.836371e-50 | -8.615850e-47 |
Msa1015220 | Msa1408750 | 0.804964 | 1.677346e-49 | -8.615850e-47 |
Msa1025040 | Msa1408750 | 0.815380 | 9.523375e-52 | -8.615850e-47 |
Msa1031190 | Msa1408750 | 0.805738 | 1.154994e-49 | -8.615850e-47 |
Msa1032560 | Msa1408750 | 0.811685 | 6.187665e-51 | -8.615850e-47 |
Msa1032790 | Msa1408750 | 0.822957 | 1.793859e-53 | -8.615850e-47 |
Msa1063590 | Msa1408750 | 0.802551 | 5.316750e-49 | -8.615850e-47 |
Msa1070370 | Msa1408750 | 0.805173 | 1.516647e-49 | -8.615850e-47 |
Msa1080610 | Msa1408750 | 0.835807 | 1.353233e-56 | -8.615850e-47 |
Msa1080680 | Msa1408750 | 0.834907 | 2.284937e-56 | -8.615850e-47 |
Msa1083620 | Msa1408750 | 0.834311 | 3.225693e-56 | -8.615850e-47 |
Msa0260580 | Msa1408750 | 0.816060 | 6.717670e-52 | -8.615850e-47 |
Msa0260640 | Msa1408750 | 0.812568 | 3.971775e-51 | -8.615850e-47 |
Msa0275250 | Msa1408750 | 0.810852 | 9.380704e-51 | -8.615850e-47 |
Msa0275260 | Msa1408750 | 0.809042 | 2.300202e-50 | -8.615850e-47 |
Msa0288170 | Msa1408750 | 0.861507 | 9.770788e-64 | -8.615850e-47 |
Msa0298820 | Msa1408750 | 0.803233 | 3.844881e-49 | -8.615850e-47 |
Msa0315720 | Msa1408750 | 0.828658 | 7.952725e-55 | -8.615850e-47 |
Msa0315760 | Msa1408750 | 0.824045 | 9.983666e-54 | -8.615850e-47 |
Msa0326630 | Msa1408750 | 0.823660 | 1.229207e-53 | -8.615850e-47 |
Msa0327990 | Msa1408750 | 0.818407 | 1.992392e-52 | -8.615850e-47 |
Msa0329050 | Msa1408750 | 0.807709 | 4.428300e-50 | -8.615850e-47 |
Msa0358750 | Msa1408750 | 0.823464 | 1.365523e-53 | -8.615850e-47 |
Msa0363180 | Msa1408750 | 0.811563 | 6.577935e-51 | -8.615850e-47 |
Msa1119420 | Msa1408750 | 0.808016 | 3.809701e-50 | -8.615850e-47 |
Msa1124530 | Msa1408750 | 0.836403 | 9.552405e-57 | -8.615850e-47 |
Msa1126320 | Msa1408750 | 0.812864 | 3.421444e-51 | -8.615850e-47 |
Msa1128610 | Msa1408750 | 0.834970 | 2.202976e-56 | -8.615850e-47 |
Msa1129300 | Msa1408750 | 0.842235 | 2.926108e-58 | -8.615850e-47 |
Msa1129880 | Msa1408750 | 0.805944 | 1.045140e-49 | -8.615850e-47 |
Msa1132250 | Msa1408750 | 0.807956 | 3.922978e-50 | -8.615850e-47 |
Msa1143810 | Msa1408750 | 0.864538 | 1.131626e-64 | -8.615850e-47 |
Msa1158180 | Msa1408750 | 0.807775 | 4.286008e-50 | -8.615850e-47 |
Msa1164720 | Msa1408750 | 0.846230 | 2.474237e-59 | -8.615850e-47 |
Msa1167150 | Msa1408750 | 0.835039 | 2.116172e-56 | -8.615850e-47 |
Msa1190510 | Msa1408750 | 0.818648 | 1.756330e-52 | -8.615850e-47 |
Msa1200060 | Msa1408750 | 0.820691 | 5.999915e-53 | -8.615850e-47 |
Msa1206510 | Msa1408750 | 0.817192 | 3.745246e-52 | -8.615850e-47 |
Msa1211060 | Msa1408750 | 0.966784 | 2.189269e-126 | -8.615850e-47 |
Msa1211930 | Msa1408750 | 0.812505 | 4.099697e-51 | -8.615850e-47 |
Msa0484560 | Msa1408750 | 0.819544 | 1.098785e-52 | -8.615850e-47 |
Msa0500610 | Msa1408750 | 0.816789 | 4.613177e-52 | -8.615850e-47 |
Msa0500700 | Msa1408750 | 0.844374 | 7.865809e-59 | -8.615850e-47 |
Msa0515530 | Msa1408750 | 0.817448 | 3.280507e-52 | -8.615850e-47 |
Msa0515580 | Msa1408750 | 0.822117 | 2.812345e-53 | -8.615850e-47 |
Msa0518150 | Msa1408750 | 0.802472 | 5.519560e-49 | -8.615850e-47 |
Msa0524470 | Msa1408750 | 0.866816 | 2.161575e-65 | -8.615850e-47 |
Msa0527420 | Msa1408750 | 0.804828 | 1.790812e-49 | -8.615850e-47 |
Msa0532870 | Msa1408750 | 0.804804 | 1.811544e-49 | -8.615850e-47 |
Msa0548650 | Msa1408750 | 0.843572 | 1.290583e-58 | -8.615850e-47 |
Msa0557440 | Msa1408750 | 0.800372 | 1.486307e-48 | -8.615850e-47 |
Msa0565370 | Msa1408750 | 0.800738 | 1.251997e-48 | -8.615850e-47 |
Msa0565430 | Msa1408750 | 0.812307 | 4.528421e-51 | -8.615850e-47 |
Msa0567190 | Msa1408750 | 0.805898 | 1.068974e-49 | -8.615850e-47 |
Msa0569580 | Msa1408750 | 0.831859 | 1.314683e-55 | -8.615850e-47 |
Msa0572880 | Msa1408750 | 0.803062 | 4.169273e-49 | -8.615850e-47 |
Msa0573940 | Msa1408750 | 0.803057 | 4.179286e-49 | -8.615850e-47 |
Msa0576020 | Msa1408750 | 0.821218 | 4.539127e-53 | -8.615850e-47 |
Msa0578400 | Msa1408750 | 0.806811 | 6.861131e-50 | -8.615850e-47 |
Msa0860630 | Msa1408750 | 0.803198 | 3.908561e-49 | -8.615850e-47 |
Msa0866060 | Msa1408750 | 0.833622 | 4.797990e-56 | -8.615850e-47 |
Msa0866150 | Msa1408750 | 0.829808 | 4.184223e-55 | -8.615850e-47 |
Msa0868510 | Msa1408750 | 0.810224 | 1.282099e-50 | -8.615850e-47 |
Msa0868520 | Msa1408750 | 0.805482 | 1.306877e-49 | -8.615850e-47 |
Msa0881880 | Msa1408750 | 0.816806 | 4.574326e-52 | -8.615850e-47 |
Msa0888460 | Msa1408750 | 0.811881 | 5.607464e-51 | -8.615850e-47 |
Msa0929440 | Msa1408750 | 0.809569 | 1.773319e-50 | -8.615850e-47 |
Msa0931410 | Msa1408750 | 0.816260 | 6.059954e-52 | -8.615850e-47 |
Msa0978550 | Msa1408750 | 0.810663 | 1.030432e-50 | -8.615850e-47 |
Msa0978560 | Msa1408750 | 0.806667 | 7.359428e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1408750 | MtrunA17_Chr8g0337211 | 97.849 | 372 | 7 | 1 | 93 | 464 | 29 | 399 | 0.0 | 751 |
Msa1408750 | MtrunA17_Chr8g0337211 | 95.918 | 98 | 2 | 2 | 1 | 97 | 1 | 97 | 2.60e-52 | 181 |
Msa1408750 | MtrunA17_Chr4g0054901 | 80.337 | 356 | 60 | 4 | 97 | 452 | 53 | 398 | 0.0 | 578 |
Msa1408750 | MtrunA17_Chr3g0096511 | 26.168 | 321 | 208 | 14 | 144 | 444 | 8 | 319 | 1.62e-13 | 71.2 |
Msa1408750 | MtrunA17_Chr5g0432811 | 26.752 | 314 | 201 | 14 | 144 | 437 | 8 | 312 | 3.37e-13 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1408750 | AT2G44530.1 | 91.239 | 331 | 26 | 2 | 136 | 464 | 65 | 394 | 0.0 | 624 |
Msa1408750 | AT2G44530.2 | 91.239 | 331 | 26 | 2 | 136 | 464 | 64 | 393 | 0.0 | 624 |
Msa1408750 | AT1G32380.1 | 84.242 | 330 | 47 | 3 | 125 | 452 | 68 | 394 | 0.0 | 578 |
Msa1408750 | AT2G35390.4 | 80.966 | 352 | 57 | 4 | 103 | 452 | 3 | 346 | 0.0 | 576 |
Msa1408750 | AT2G35390.1 | 80.966 | 352 | 57 | 4 | 103 | 452 | 3 | 346 | 0.0 | 576 |
Msa1408750 | AT2G35390.2 | 80.966 | 352 | 57 | 4 | 103 | 452 | 54 | 397 | 0.0 | 576 |
Msa1408750 | AT1G32380.2 | 89.895 | 287 | 28 | 1 | 166 | 452 | 1 | 286 | 0.0 | 540 |
Msa1408750 | AT2G35390.3 | 79.866 | 298 | 50 | 4 | 103 | 398 | 54 | 343 | 1.25e-166 | 473 |
Msa1408750 | AT1G10700.1 | 25.392 | 319 | 210 | 14 | 106 | 406 | 54 | 362 | 1.05e-13 | 73.2 |
Find 106 sgRNAs with CRISPR-Local
Find 787 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTGCAGTCATTCCATATTT+TGG | 0.133514 | tig0023416:-4242 | Msa1408750:CDS |
ATAGGAAATTGCATGTTATA+TGG | 0.209711 | tig0023416:-4450 | Msa1408750:intron |
CCTCCACTCTGGGCAGTCTA+TGG | 0.245181 | tig0023416:-3257 | Msa1408750:CDS |
CTACTGATAAGACAGTTAAT+TGG | 0.262391 | tig0023416:+753 | None:intergenic |
GCTCTAGCATATCCAAAATA+TGG | 0.280293 | tig0023416:+4230 | None:intergenic |
ATGTTATATGGGCCTGGATC+TGG | 0.313034 | tig0023416:-4438 | Msa1408750:CDS |
ATCTGAACAAATAGTCTTGC+TGG | 0.323128 | tig0023416:+2758 | None:intergenic |
TACTGATAAGACAGTTAATT+GGG | 0.362406 | tig0023416:+754 | None:intergenic |
CTTATCAGTAGCAAACCTTC+TGG | 0.366216 | tig0023416:-741 | Msa1408750:CDS |
AATTTGATTGGTGATGTAAA+AGG | 0.370527 | tig0023416:-2463 | Msa1408750:CDS |
TCAACTGAATATTCAGTTAC+CGG | 0.386620 | tig0023416:-12809 | Msa1408750:CDS |
TCAACTGAATATTCAGTTAC+CGG | 0.386620 | tig0023416:-8725 | Msa1408750:CDS |
TCCAACTGCAAGAGAGTGTC+AGG | 0.388820 | tig0023416:-4373 | Msa1408750:CDS |
CTAAATTCGGAAGGAGGATT+AGG | 0.393019 | tig0023416:+13102 | None:intergenic |
TGTAGTACAATCTGTCAATC+TGG | 0.401957 | tig0023416:-12852 | Msa1408750:CDS |
TGTAGTACAATCTGTCAATC+TGG | 0.401957 | tig0023416:-8768 | Msa1408750:CDS |
CTTGCATGTGACCTCCACTC+TGG | 0.408654 | tig0023416:-3268 | Msa1408750:CDS |
GCAAGGTAATCGAGTATAAC+AGG | 0.410223 | tig0023416:+2780 | None:intergenic |
AGGGAGAAACGAGGAGTGAT+AGG | 0.412888 | tig0023416:+12987 | None:intergenic |
TAGGAAATTGCATGTTATAT+GGG | 0.416483 | tig0023416:-4449 | Msa1408750:CDS |
ACCTTCTGGGCGAGACCATA+TGG | 0.425438 | tig0023416:-727 | Msa1408750:CDS |
TCCCGCGAATGAGAATCTTA+TGG | 0.430669 | tig0023416:-4315 | Msa1408750:CDS |
AGATCATGAATACGAGTGTT+TGG | 0.434509 | tig0023416:+12752 | None:intergenic |
AGATCATGAATACGAGTGTT+TGG | 0.434509 | tig0023416:+8668 | None:intergenic |
TGTCCATACACATGATCAAC+TGG | 0.436657 | tig0023416:+3220 | None:intergenic |
GCAAATTTAATTACAGAAGC+TGG | 0.437018 | tig0023416:-3304 | Msa1408750:CDS |
AACAAATAGTCTTGCTGGCA+AGG | 0.449627 | tig0023416:+2763 | None:intergenic |
ATTCCAGTTGATCATGTGTA+TGG | 0.449841 | tig0023416:-3223 | Msa1408750:CDS |
CTAGCTACACCACCAACATC+TGG | 0.450859 | tig0023416:+2717 | None:intergenic |
GTAAACGGTTACGCTAAATT+CGG | 0.464662 | tig0023416:+13089 | None:intergenic |
TTGCATGTGACCTCCACTCT+GGG | 0.471838 | tig0023416:-3267 | Msa1408750:CDS |
GAAAGAAGATTGAAGTAGAG+TGG | 0.474188 | tig0023416:+13034 | None:intergenic |
TACCTGAGCGAGTGCGGGAT+TGG | 0.477160 | tig0023416:+12691 | None:intergenic |
TACCTGAGCGAGTGCGGGAT+TGG | 0.477160 | tig0023416:+8607 | None:intergenic |
TTGCAGGTGATGAATTTGAT+TGG | 0.480553 | tig0023416:-2475 | Msa1408750:intron |
CGACGGCGGCGGCGTTGCGG+AGG | 0.486887 | tig0023416:+12967 | None:intergenic |
TTATCAGTAGCAAACCTTCT+GGG | 0.489700 | tig0023416:-740 | Msa1408750:CDS |
CAATCTGTCAATCTGGAAAA+CGG | 0.495351 | tig0023416:-12845 | Msa1408750:CDS |
CAATCTGTCAATCTGGAAAA+CGG | 0.495351 | tig0023416:-8761 | Msa1408750:CDS |
CTGAGCGAGTGCGGGATTGG+CGG | 0.495771 | tig0023416:+12694 | None:intergenic |
CTGAGCGAGTGCGGGATTGG+CGG | 0.495771 | tig0023416:+8610 | None:intergenic |
ATGGCGTAACACTCAGTAAA+CGG | 0.505357 | tig0023416:+13074 | None:intergenic |
TTTGGCAGAAGCTCTCCTGC+AGG | 0.516016 | tig0023416:+4271 | None:intergenic |
AATTGCATGTTATATGGGCC+TGG | 0.517043 | tig0023416:-4444 | Msa1408750:CDS |
TGTTATATGGGCCTGGATCT+GGG | 0.520595 | tig0023416:-4437 | Msa1408750:CDS |
CCCTGACACTCTCTTGCAGT+TGG | 0.525864 | tig0023416:+4372 | None:intergenic |
TCCATAAGATTCTCATTCGC+GGG | 0.527102 | tig0023416:+4314 | None:intergenic |
CTCCATAAGATTCTCATTCG+CGG | 0.529400 | tig0023416:+4313 | None:intergenic |
CTTGACAATCTCTCTATAGC+AGG | 0.530606 | tig0023416:+839 | None:intergenic |
TCGTAATGATTGATGCCTGC+AGG | 0.530985 | tig0023416:-4286 | Msa1408750:CDS |
AAAAGGAAAGGTAGCAGTGA+TGG | 0.532343 | tig0023416:-2446 | Msa1408750:CDS |
CGACGACGGCGGCGGCGTTG+CGG | 0.533290 | tig0023416:+12964 | None:intergenic |
CAACTACTGTTTCAGACTCA+AGG | 0.542966 | tig0023416:-3355 | Msa1408750:intron |
AGTTGATCATGTGTATGGAC+AGG | 0.543298 | tig0023416:-3218 | Msa1408750:intron |
GACGGCGGCGGCGTTGCGGA+GGG | 0.548828 | tig0023416:+12968 | None:intergenic |
AAGTAGTTCTTCTCTGCTAG+TGG | 0.549029 | tig0023416:+779 | None:intergenic |
GATGATACCTGAGCGAGTGC+GGG | 0.549570 | tig0023416:+12686 | None:intergenic |
GATGATACCTGAGCGAGTGC+GGG | 0.549570 | tig0023416:+8602 | None:intergenic |
AATTCGGAAGGAGGATTAGG+TGG | 0.549616 | tig0023416:+13105 | None:intergenic |
ATTGTTGATAAAAGACGTCA+TGG | 0.550483 | tig0023416:-2651 | Msa1408750:CDS |
ATATGCTAGAGCTGATAGAA+AGG | 0.559762 | tig0023416:-4219 | Msa1408750:intron |
CGGAATTGAACTTGTACCAC+CGG | 0.561435 | tig0023416:+12790 | None:intergenic |
CGGAATTGAACTTGTACCAC+CGG | 0.561435 | tig0023416:+8706 | None:intergenic |
GGACATGATGAATGAATGAA+TGG | 0.561934 | tig0023416:+13055 | None:intergenic |
GATTGGTGATGTAAAAGGAA+AGG | 0.565352 | tig0023416:-2458 | Msa1408750:CDS |
TCATTCGCGGGAGGACATGT+AGG | 0.571769 | tig0023416:+4326 | None:intergenic |
GGATGATACCTGAGCGAGTG+CGG | 0.580736 | tig0023416:+12685 | None:intergenic |
GGATGATACCTGAGCGAGTG+CGG | 0.580736 | tig0023416:+8601 | None:intergenic |
AAAGAGCTGCTCCTTTGCGA+TGG | 0.585610 | tig0023416:+1309 | None:intergenic |
GCCATATGGTCTCGCCCAGA+AGG | 0.586947 | tig0023416:+726 | None:intergenic |
ATAGTTGTCTCGCCAGATGT+TGG | 0.591097 | tig0023416:-2729 | Msa1408750:CDS |
GTTACTTACGACGACGGCGG+CGG | 0.591923 | tig0023416:+12956 | None:intergenic |
GACAATCTCTCTATAGCAGG+AGG | 0.595468 | tig0023416:+842 | None:intergenic |
GATGACATGATTGATACTGC+TGG | 0.599761 | tig0023416:-2421 | Msa1408750:CDS |
GTTGTCTCGCCAGATGTTGG+TGG | 0.603849 | tig0023416:-2726 | Msa1408750:CDS |
GAATATTCAGTTGAACGGTA+CGG | 0.605959 | tig0023416:+12818 | None:intergenic |
GAATATTCAGTTGAACGGTA+CGG | 0.605959 | tig0023416:+8734 | None:intergenic |
TAACTGAATATTCAGTTGAA+CGG | 0.606307 | tig0023416:+12813 | None:intergenic |
TAACTGAATATTCAGTTGAA+CGG | 0.606307 | tig0023416:+8729 | None:intergenic |
TTCAATTCCGAGTTATCTAG+TGG | 0.607893 | tig0023416:-12777 | Msa1408750:CDS |
TTCAATTCCGAGTTATCTAG+TGG | 0.607893 | tig0023416:-8693 | Msa1408750:CDS |
TCTTATAGGGACCATCGCAA+AGG | 0.611140 | tig0023416:-1320 | Msa1408750:intron |
GTTACGCTAAATTCGGAAGG+AGG | 0.612911 | tig0023416:+13096 | None:intergenic |
AACTACTGTTTCAGACTCAA+GGG | 0.616461 | tig0023416:-3354 | Msa1408750:intron |
ATTCGGAAGGAGGATTAGGT+GGG | 0.629840 | tig0023416:+13106 | None:intergenic |
TTTGGCGCCACTAGATAACT+CGG | 0.630034 | tig0023416:+12770 | None:intergenic |
TTTGGCGCCACTAGATAACT+CGG | 0.630034 | tig0023416:+8686 | None:intergenic |
CCATAGACTGCCCAGAGTGG+AGG | 0.638297 | tig0023416:+3257 | None:intergenic |
ACGGTTACGCTAAATTCGGA+AGG | 0.642915 | tig0023416:+13093 | None:intergenic |
ACTGATAAGACAGTTAATTG+GGG | 0.644887 | tig0023416:+755 | None:intergenic |
AGCCCATAGACTGCCCAGAG+TGG | 0.655210 | tig0023416:+3254 | None:intergenic |
TCATGGGCATAATGTTGCCG+AGG | 0.655448 | tig0023416:-2634 | Msa1408750:intron |
TTGGACATATATCTCCCCAT+CGG | 0.659494 | tig0023416:+4391 | None:intergenic |
ATAAGATTCTCATTCGCGGG+AGG | 0.659940 | tig0023416:+4317 | None:intergenic |
ACAATCTCTCTATAGCAGGA+GGG | 0.668556 | tig0023416:+843 | None:intergenic |
CAACTGCAAGAGAGTGTCAG+GGG | 0.669938 | tig0023416:-4371 | Msa1408750:CDS |
CCAACTGCAAGAGAGTGTCA+GGG | 0.672047 | tig0023416:-4372 | Msa1408750:CDS |
ACTGAATATTCAGTTACCGG+TGG | 0.679249 | tig0023416:-12806 | Msa1408750:CDS |
ACTGAATATTCAGTTACCGG+TGG | 0.679249 | tig0023416:-8722 | Msa1408750:CDS |
CTGATAAGACAGTTAATTGG+GGG | 0.686616 | tig0023416:+756 | None:intergenic |
TTGTTGATAAAAGACGTCAT+GGG | 0.699425 | tig0023416:-2650 | Msa1408750:CDS |
GCTATAGAGAGATTGTCAAG+CGG | 0.702672 | tig0023416:-836 | Msa1408750:CDS |
GAGAGAGTTACTTACGACGA+CGG | 0.708624 | tig0023416:+12950 | None:intergenic |
AACTGCAAGAGAGTGTCAGG+GGG | 0.717564 | tig0023416:-4370 | Msa1408750:CDS |
AGAGTTACTTACGACGACGG+CGG | 0.740080 | tig0023416:+12953 | None:intergenic |
GCGTTGCGGAGGGAGAAACG+AGG | 0.760496 | tig0023416:+12978 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTGTTTGTTTTTT+GGG | + | tig0023416:2001-2020 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTGTTTGTTTTT+TGG | + | tig0023416:2002-2021 | None:intergenic | 10.0% |
!!! | TTTTTTTTTGTTTGTTTTTT+GGG | + | tig0023416:2001-2020 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTGTTTGTTTTT+TGG | + | tig0023416:2002-2021 | None:intergenic | 10.0% |
!! | ATAAAATTTCAAATATCATT+AGG | + | tig0023416:8612-8631 | None:intergenic | 10.0% |
!!! | TTATTTTTTTACAAAATACT+TGG | - | tig0023416:9465-9484 | Msa1408750:intron | 10.0% |
!! | TAATAATTTATTTCAATTTG+TGG | - | tig0023416:11923-11942 | Msa1408750:intron | 10.0% |
!! | ATTATATTGAGATGTAATAT+AGG | - | tig0023416:518-537 | Msa1408750:intron | 15.0% |
!!! | CTATTTAAAGATTTTCTAAT+AGG | + | tig0023416:1240-1259 | None:intergenic | 15.0% |
!! | TGTGATATTATCATAAATAA+TGG | - | tig0023416:3112-3131 | Msa1408750:intron | 15.0% |
!! | TTCTTTATAATTGTTATCAA+TGG | + | tig0023416:3278-3297 | None:intergenic | 15.0% |
!! | ACAATTATAAAGAAAATGTA+CGG | - | tig0023416:3284-3303 | Msa1408750:CDS | 15.0% |
!! | TAAATTGAGATGTAATATAT+TGG | + | tig0023416:4125-4144 | None:intergenic | 15.0% |
!!! | AGTTAACTTGATAATTTTTT+AGG | - | tig0023416:4192-4211 | Msa1408750:intron | 15.0% |
!! | TAATTAAGTGCTTATATTAT+AGG | - | tig0023416:4235-4254 | Msa1408750:CDS | 15.0% |
!! | ATTATATTGAGATGTAATAT+AGG | - | tig0023416:518-537 | Msa1408750:intron | 15.0% |
!!! | CTATTTAAAGATTTTCTAAT+AGG | + | tig0023416:1240-1259 | None:intergenic | 15.0% |
!! | TGTGATATTATCATAAATAA+TGG | - | tig0023416:3112-3131 | Msa1408750:intron | 15.0% |
!! | TTCTTTATAATTGTTATCAA+TGG | + | tig0023416:3278-3297 | None:intergenic | 15.0% |
!! | ACAATTATAAAGAAAATGTA+CGG | - | tig0023416:3284-3303 | Msa1408750:CDS | 15.0% |
!! | TAAATTGAGATGTAATATAT+TGG | + | tig0023416:4125-4144 | None:intergenic | 15.0% |
!!! | AGTTAACTTGATAATTTTTT+AGG | - | tig0023416:4192-4211 | Msa1408750:intron | 15.0% |
!! | TAATTAAGTGCTTATATTAT+AGG | - | tig0023416:4235-4254 | Msa1408750:CDS | 15.0% |
!!! | TTTGTTTTTCTCAAAAAAAA+AGG | - | tig0023416:9728-9747 | Msa1408750:intron | 15.0% |
!! | AAGAAAATCAGAAATTTAAA+GGG | + | tig0023416:10160-10179 | None:intergenic | 15.0% |
!! | ATATATATCATCAAGAAAAA+GGG | + | tig0023416:10998-11017 | None:intergenic | 15.0% |
!! | AATATATATCATCAAGAAAA+AGG | + | tig0023416:10999-11018 | None:intergenic | 15.0% |
!!! | GATATATATTATTTTTCTAC+AGG | - | tig0023416:11009-11028 | Msa1408750:intron | 15.0% |
!! | AAGACAAATATAATTCAATT+TGG | + | tig0023416:11267-11286 | None:intergenic | 15.0% |
!!! | ATTATCTTTAGCTAAAATTT+TGG | - | tig0023416:11677-11696 | Msa1408750:intron | 15.0% |
!!! | AAATTGTTAATTTGTCTTAT+AGG | - | tig0023416:11797-11816 | Msa1408750:intron | 15.0% |
!!! | AATTGTTAATTTGTCTTATA+GGG | - | tig0023416:11798-11817 | Msa1408750:intron | 15.0% |
!!! | TCAAATTATTAAAAGTGTCT+GGG | + | tig0023416:698-717 | None:intergenic | 20.0% |
!! | TTCATAGTAATTATATGTGT+CGG | - | tig0023416:731-750 | Msa1408750:CDS | 20.0% |
!! | TTTATCCTTATTATCGTATT+CGG | + | tig0023416:840-859 | None:intergenic | 20.0% |
!! | ACTTATGAACATAAACTTAT+AGG | - | tig0023416:996-1015 | Msa1408750:intron | 20.0% |
!! | AGAATAATAACTGATTAGAA+TGG | - | tig0023416:1147-1166 | Msa1408750:intron | 20.0% |
!! | GAGAATAATATAGAACATTA+TGG | - | tig0023416:1356-1375 | Msa1408750:intron | 20.0% |
!! | AAAATAAAGTCATAGTGATT+AGG | - | tig0023416:1416-1435 | Msa1408750:intron | 20.0% |
!! | TTATTTATACTACTCAAAGA+AGG | + | tig0023416:1564-1583 | None:intergenic | 20.0% |
!! | TTCTTTGAGTAGTATAAATA+AGG | - | tig0023416:1563-1582 | Msa1408750:intron | 20.0% |
!!! | ATCTTTTCATGAAATTGAAA+TGG | - | tig0023416:2069-2088 | Msa1408750:intron | 20.0% |
!!! | AAATTGGATTGATAATAATG+AGG | + | tig0023416:2511-2530 | None:intergenic | 20.0% |
!! | ATCATCATATATTGAATCTA+TGG | + | tig0023416:2894-2913 | None:intergenic | 20.0% |
!! | AAATGGTATATTGAACAATA+TGG | - | tig0023416:3144-3163 | Msa1408750:intron | 20.0% |
!! | GAGAATAATATAGAACATTA+TGG | - | tig0023416:1356-1375 | Msa1408750:intron | 20.0% |
!! | AAAATAAAGTCATAGTGATT+AGG | - | tig0023416:1416-1435 | Msa1408750:intron | 20.0% |
!! | TTATTTATACTACTCAAAGA+AGG | + | tig0023416:1564-1583 | None:intergenic | 20.0% |
!! | TTCTTTGAGTAGTATAAATA+AGG | - | tig0023416:1563-1582 | Msa1408750:intron | 20.0% |
!!! | TCAAATTATTAAAAGTGTCT+GGG | + | tig0023416:698-717 | None:intergenic | 20.0% |
!! | TTCATAGTAATTATATGTGT+CGG | - | tig0023416:731-750 | Msa1408750:CDS | 20.0% |
!! | TTTATCCTTATTATCGTATT+CGG | + | tig0023416:840-859 | None:intergenic | 20.0% |
!! | ACTTATGAACATAAACTTAT+AGG | - | tig0023416:996-1015 | Msa1408750:intron | 20.0% |
!! | AGAATAATAACTGATTAGAA+TGG | - | tig0023416:1147-1166 | Msa1408750:intron | 20.0% |
!! | GAGAATAATATAGAACATTA+TGG | - | tig0023416:1356-1375 | Msa1408750:intron | 20.0% |
!! | AAAATAAAGTCATAGTGATT+AGG | - | tig0023416:1416-1435 | Msa1408750:intron | 20.0% |
!! | TTATTTATACTACTCAAAGA+AGG | + | tig0023416:1564-1583 | None:intergenic | 20.0% |
!! | TTCTTTGAGTAGTATAAATA+AGG | - | tig0023416:1563-1582 | Msa1408750:intron | 20.0% |
!!! | ATCTTTTCATGAAATTGAAA+TGG | - | tig0023416:2069-2088 | Msa1408750:intron | 20.0% |
!!! | AAATTGGATTGATAATAATG+AGG | + | tig0023416:2511-2530 | None:intergenic | 20.0% |
!! | ATCATCATATATTGAATCTA+TGG | + | tig0023416:2894-2913 | None:intergenic | 20.0% |
!! | AAATGGTATATTGAACAATA+TGG | - | tig0023416:3144-3163 | Msa1408750:intron | 20.0% |
!! | GAGAATAATATAGAACATTA+TGG | - | tig0023416:1356-1375 | Msa1408750:intron | 20.0% |
!! | AAAATAAAGTCATAGTGATT+AGG | - | tig0023416:1416-1435 | Msa1408750:intron | 20.0% |
!! | TTATTTATACTACTCAAAGA+AGG | + | tig0023416:1564-1583 | None:intergenic | 20.0% |
!! | TTCTTTGAGTAGTATAAATA+AGG | - | tig0023416:1563-1582 | Msa1408750:intron | 20.0% |
!!! | TTATGTATAAGCTATTTCTA+TGG | - | tig0023416:8365-8384 | Msa1408750:intron | 20.0% |
!!! | CTATAAGTTGTTTTCATAAA+TGG | - | tig0023416:8425-8444 | Msa1408750:intron | 20.0% |
!!! | TTTCTGATTTGCATTTAAAT+AGG | - | tig0023416:8663-8682 | Msa1408750:CDS | 20.0% |
!!! | ATAACTTGAATGTCATTTTT+AGG | - | tig0023416:9078-9097 | Msa1408750:intron | 20.0% |
!!! | ATGTAAATAAACTACCTTTT+TGG | - | tig0023416:9531-9550 | Msa1408750:intron | 20.0% |
!! | GGTCATATAAACAATAAAAT+AGG | + | tig0023416:10139-10158 | None:intergenic | 20.0% |
!! | GAAGAAAATCAGAAATTTAA+AGG | + | tig0023416:10161-10180 | None:intergenic | 20.0% |
!!! | AAAAGTATATTAACATACCT+CGG | + | tig0023416:10517-10536 | None:intergenic | 20.0% |
!! | GAGATTCAAAGTATAAATAA+GGG | + | tig0023416:10976-10995 | None:intergenic | 20.0% |
!!! | AAAGTTGCAAGATTTTTTTA+AGG | + | tig0023416:11041-11060 | None:intergenic | 20.0% |
!!! | TAACTTAATCTTGTCATTTT+AGG | - | tig0023416:11104-11123 | Msa1408750:intron | 20.0% |
!! | TATTAATCAGTCTATTCATT+TGG | - | tig0023416:11650-11669 | Msa1408750:intron | 20.0% |
!! | CAAATTAACAATTTATTGAG+CGG | + | tig0023416:11791-11810 | None:intergenic | 20.0% |
!! | TTCTGTAAAATAAGTTTAGT+TGG | - | tig0023416:12461-12480 | Msa1408750:intron | 20.0% |
!!! | CTATTCAAATACATCAATTT+TGG | - | tig0023416:12557-12576 | Msa1408750:intron | 20.0% |
!! | CTAGACTGTATTATTAATAA+TGG | - | tig0023416:12625-12644 | Msa1408750:intron | 20.0% |
! | TAACTGAATATTCAGTTGAA+CGG | + | tig0023416:321-340 | None:intergenic | 25.0% |
!!! | CTCAAATTATTAAAAGTGTC+TGG | + | tig0023416:699-718 | None:intergenic | 25.0% |
! | GTTACAAAAAATGTCTAGTT+TGG | - | tig0023416:916-935 | Msa1408750:intron | 25.0% |
!!! | AAAGTAGTAAAGAGTGTTAT+AGG | - | tig0023416:1172-1191 | Msa1408750:intron | 25.0% |
! | TGTTATAGGAATTAGTTAGT+TGG | - | tig0023416:1186-1205 | Msa1408750:intron | 25.0% |
! | ATAGTATTCTCTAATGTGAA+AGG | - | tig0023416:1308-1327 | Msa1408750:CDS | 25.0% |
! | TAGTATTCTCTAATGTGAAA+GGG | - | tig0023416:1309-1328 | Msa1408750:CDS | 25.0% |
! | AAATTGAAATGGAAGAAATG+AGG | - | tig0023416:2080-2099 | Msa1408750:intron | 25.0% |
! | CATCATCTTCAAATCTTATT+TGG | + | tig0023416:2165-2184 | None:intergenic | 25.0% |
!!! | CCATTGTTTTTGAGTAAAAT+TGG | + | tig0023416:2527-2546 | None:intergenic | 25.0% |
!! | CCAATTTTACTCAAAAACAA+TGG | - | tig0023416:2524-2543 | Msa1408750:intron | 25.0% |
!! | TTGAGAATCGATATGATTTT+TGG | + | tig0023416:2583-2602 | None:intergenic | 25.0% |
! | TCTATGAATGTATTATGTTG+GGG | + | tig0023416:2642-2661 | None:intergenic | 25.0% |
! | CTCTATGAATGTATTATGTT+GGG | + | tig0023416:2643-2662 | None:intergenic | 25.0% |
! | TCTCTATGAATGTATTATGT+TGG | + | tig0023416:2644-2663 | None:intergenic | 25.0% |
! | ACATATTCTTCATCATAGAT+TGG | + | tig0023416:2833-2852 | None:intergenic | 25.0% |
! | ATCTATGATGAAGAATATGT+TGG | - | tig0023416:2833-2852 | Msa1408750:intron | 25.0% |
! | TGAATATGGTGAATCTTTAA+AGG | - | tig0023416:2997-3016 | Msa1408750:intron | 25.0% |
! | AAAATTAAAGTTGTCGACAA+AGG | - | tig0023416:3171-3190 | Msa1408750:intron | 25.0% |
! | CTATCATTGAATTCATTGAA+TGG | + | tig0023416:3448-3467 | None:intergenic | 25.0% |
! | TGAATTCAATGATAGAAAAG+AGG | - | tig0023416:3453-3472 | Msa1408750:intron | 25.0% |
!!! | GTTACTATTGATTTTTTCCA+TGG | - | tig0023416:3574-3593 | Msa1408750:intron | 25.0% |
!!! | ATTTTTTCCATGGATTACTT+TGG | - | tig0023416:3584-3603 | Msa1408750:intron | 25.0% |
! | AAATAGCTCATTTCATCATA+TGG | - | tig0023416:3656-3675 | Msa1408750:intron | 25.0% |
!!! | ATAATTTTTTAGGATCTGCT+TGG | - | tig0023416:4202-4221 | Msa1408750:intron | 25.0% |
! | TAACTGAATATTCAGTTGAA+CGG | + | tig0023416:321-340 | None:intergenic | 25.0% |
!!! | CTCAAATTATTAAAAGTGTC+TGG | + | tig0023416:699-718 | None:intergenic | 25.0% |
! | AAGTAGTAAAGAGTTGTTAT+AGG | - | tig0023416:5257-5276 | Msa1408750:intron | 25.0% |
! | TGTTATAGGAATTAGTTAGT+TGG | - | tig0023416:1186-1205 | Msa1408750:intron | 25.0% |
! | ATAGTATTCTCTAATGTGAA+AGG | - | tig0023416:1308-1327 | Msa1408750:CDS | 25.0% |
! | TAGTATTCTCTAATGTGAAA+GGG | - | tig0023416:1309-1328 | Msa1408750:CDS | 25.0% |
! | AAATTGAAATGGAAGAAATG+AGG | - | tig0023416:2080-2099 | Msa1408750:intron | 25.0% |
! | CATCATCTTCAAATCTTATT+TGG | + | tig0023416:2165-2184 | None:intergenic | 25.0% |
!!! | CCATTGTTTTTGAGTAAAAT+TGG | + | tig0023416:2527-2546 | None:intergenic | 25.0% |
!! | CCAATTTTACTCAAAAACAA+TGG | - | tig0023416:2524-2543 | Msa1408750:intron | 25.0% |
!! | TTGAGAATCGATATGATTTT+TGG | + | tig0023416:2583-2602 | None:intergenic | 25.0% |
! | TCTATGAATGTATTATGTTG+GGG | + | tig0023416:2642-2661 | None:intergenic | 25.0% |
! | CTCTATGAATGTATTATGTT+GGG | + | tig0023416:2643-2662 | None:intergenic | 25.0% |
! | TCTCTATGAATGTATTATGT+TGG | + | tig0023416:2644-2663 | None:intergenic | 25.0% |
! | ACATATTCTTCATCATAGAT+TGG | + | tig0023416:2833-2852 | None:intergenic | 25.0% |
! | ATCTATGATGAAGAATATGT+TGG | - | tig0023416:2833-2852 | Msa1408750:intron | 25.0% |
! | TGAATATGGTGAATCTTTAA+AGG | - | tig0023416:2997-3016 | Msa1408750:intron | 25.0% |
! | AAAATTAAAGTTGTCGACAA+AGG | - | tig0023416:3171-3190 | Msa1408750:intron | 25.0% |
! | CTATCATTGAATTCATTGAA+TGG | + | tig0023416:3448-3467 | None:intergenic | 25.0% |
! | TGAATTCAATGATAGAAAAG+AGG | - | tig0023416:3453-3472 | Msa1408750:intron | 25.0% |
!!! | GTTACTATTGATTTTTTCCA+TGG | - | tig0023416:3574-3593 | Msa1408750:intron | 25.0% |
!!! | ATTTTTTCCATGGATTACTT+TGG | - | tig0023416:3584-3603 | Msa1408750:intron | 25.0% |
! | AAATAGCTCATTTCATCATA+TGG | - | tig0023416:3656-3675 | Msa1408750:intron | 25.0% |
!!! | ATAATTTTTTAGGATCTGCT+TGG | - | tig0023416:4202-4221 | Msa1408750:intron | 25.0% |
! | TGAATAGAAATTTCTCTACA+AGG | + | tig0023416:8521-8540 | None:intergenic | 25.0% |
!! | AACTTGCTCATGATATAATA+TGG | - | tig0023416:8542-8561 | Msa1408750:intron | 25.0% |
! | ATAGGAAATTGCATGTTATA+TGG | - | tig0023416:8681-8700 | Msa1408750:CDS | 25.0% |
! | TAGGAAATTGCATGTTATAT+GGG | - | tig0023416:8682-8701 | Msa1408750:CDS | 25.0% |
!! | AATGACTGCAGTAATATTTT+TGG | + | tig0023416:8881-8900 | None:intergenic | 25.0% |
! | TTAGGAATGAACATAAGATA+AGG | - | tig0023416:9096-9115 | Msa1408750:intron | 25.0% |
! | TAGGAATGAACATAAGATAA+GGG | - | tig0023416:9097-9116 | Msa1408750:intron | 25.0% |
!!! | TGCTTATTTTCTTATCAACT+CGG | + | tig0023416:9406-9425 | None:intergenic | 25.0% |
! | ATACTGATAATCATTTGGTA+TGG | + | tig0023416:9495-9514 | None:intergenic | 25.0% |
! | ATTCATGTACAAGTAATGTT+AGG | + | tig0023416:9676-9695 | None:intergenic | 25.0% |
! | AGGTAATAGATTATTGTACA+TGG | - | tig0023416:9933-9952 | Msa1408750:intron | 25.0% |
!! | ATCTAAGAAAAGCAAGTTTT+GGG | + | tig0023416:10198-10217 | None:intergenic | 25.0% |
! | TAAAAAATGTTTGCCTGAAT+GGG | + | tig0023416:10240-10259 | None:intergenic | 25.0% |
! | ATAAAAAATGTTTGCCTGAA+TGG | + | tig0023416:10241-10260 | None:intergenic | 25.0% |
!!! | TTCAGGCAAACATTTTTTAT+TGG | - | tig0023416:10241-10260 | Msa1408750:intron | 25.0% |
! | TTGAAACTGTCAATGTAATT+CGG | - | tig0023416:10286-10305 | Msa1408750:intron | 25.0% |
!! | CTTTTATCAACAATTGCTAA+AGG | + | tig0023416:10474-10493 | None:intergenic | 25.0% |
!! | ATATGCTTCATTAGCTTAAA+GGG | + | tig0023416:10579-10598 | None:intergenic | 25.0% |
!! | AATATGCTTCATTAGCTTAA+AGG | + | tig0023416:10580-10599 | None:intergenic | 25.0% |
!! | AAACTTTAGGCTTTTCTTAT+TGG | - | tig0023416:10621-10640 | Msa1408750:intron | 25.0% |
!!! | AATTTGATTGGTGATGTAAA+AGG | - | tig0023416:10668-10687 | Msa1408750:intron | 25.0% |
! | TTGAGTCCTTATTCATAAAA+AGG | - | tig0023416:10892-10911 | Msa1408750:intron | 25.0% |
!! | TCATGACCTTTTTATGAATA+AGG | + | tig0023416:10901-10920 | None:intergenic | 25.0% |
! | GGAGATTCAAAGTATAAATA+AGG | + | tig0023416:10977-10996 | None:intergenic | 25.0% |
! | AAAAATCTTGCAACTTTACA+AGG | - | tig0023416:11044-11063 | Msa1408750:intron | 25.0% |
! | AAGAAAATTCAGAAACTCAA+TGG | + | tig0023416:11081-11100 | None:intergenic | 25.0% |
! | TTAGAGATGAAAATCATTCT+AGG | - | tig0023416:11581-11600 | Msa1408750:intron | 25.0% |
! | TTGTGGTGAAATGAAAATAA+AGG | - | tig0023416:11977-11996 | Msa1408750:intron | 25.0% |
! | TGTGGTGAAATGAAAATAAA+GGG | - | tig0023416:11978-11997 | Msa1408750:intron | 25.0% |
! | TATCTATATTCATGACATCT+AGG | + | tig0023416:12156-12175 | None:intergenic | 25.0% |
!!! | CTTAGTTGTTTTTTGATACA+AGG | - | tig0023416:12225-12244 | Msa1408750:intron | 25.0% |
! | TACTGATAAGACAGTTAATT+GGG | + | tig0023416:12380-12399 | None:intergenic | 25.0% |
! | TCATTCTACCAATAGAAAAA+AGG | - | tig0023416:12492-12511 | Msa1408750:intron | 25.0% |
! | TAATACAGTCTAGCAATAAA+TGG | + | tig0023416:12618-12637 | None:intergenic | 25.0% |
!! | TTTTATAGCAAAAACAGAAG+AGG | + | tig0023416:12699-12718 | None:intergenic | 25.0% |
! | TAGCAAAAATTATTGCTCAA+CGG | + | tig0023416:12730-12749 | None:intergenic | 25.0% |
!!! | TTTGCTAGTTTTGTTTGTAT+AGG | - | tig0023416:12743-12762 | Msa1408750:CDS | 25.0% |
! | ATTGCAAGATAAATCTACTT+TGG | + | tig0023416:12781-12800 | None:intergenic | 25.0% |
! | ACAAAATTATACTCATCAAG+CGG | + | tig0023416:13070-13089 | None:intergenic | 25.0% |
ATAGCTGAATGTGAATTTCT+TGG | - | tig0023416:238-257 | Msa1408750:three_prime_UTR | 30.0% | |
TCAACTGAATATTCAGTTAC+CGG | - | tig0023416:322-341 | Msa1408750:intron | 30.0% | |
TCTTTCCGAATACGATAATA+AGG | - | tig0023416:832-851 | Msa1408750:CDS | 30.0% | |
ATAAACTATTAGGCTCAGTT+TGG | + | tig0023416:968-987 | None:intergenic | 30.0% | |
AAACTGAGCCTAATAGTTTA+TGG | - | tig0023416:967-986 | Msa1408750:intron | 30.0% | |
GTGAAGAACCATAAACTATT+AGG | + | tig0023416:978-997 | None:intergenic | 30.0% | |
ATAGGAATTAGTTAGTTGGT+TGG | - | tig0023416:1190-1209 | Msa1408750:intron | 30.0% | |
TAGGAATTAGTTAGTTGGTT+GGG | - | tig0023416:1191-1210 | Msa1408750:intron | 30.0% | |
AGTATTCTCTAATGTGAAAG+GGG | - | tig0023416:1310-1329 | Msa1408750:CDS | 30.0% | |
AACCCTTTGATAGAGAATTA+TGG | - | tig0023416:1334-1353 | Msa1408750:intron | 30.0% | |
CTCCATAATTCTCTATCAAA+GGG | + | tig0023416:1339-1358 | None:intergenic | 30.0% | |
TCTCCATAATTCTCTATCAA+AGG | + | tig0023416:1340-1359 | None:intergenic | 30.0% | |
AGTTTAAGCGAAGAAATCAA+CGG | - | tig0023416:1751-1770 | Msa1408750:intron | 30.0% | |
TTTCTCAAAACTTCACTTTG+CGG | - | tig0023416:1916-1935 | Msa1408750:intron | 30.0% | |
CTTTAATATCATTCACCTGA+AGG | + | tig0023416:2240-2259 | None:intergenic | 30.0% | |
! | TAGACATTCCAGATTTTGAA+GGG | - | tig0023416:2260-2279 | Msa1408750:intron | 30.0% |
TGAACGTGTATTTGAGTATA+AGG | - | tig0023416:2324-2343 | Msa1408750:intron | 30.0% | |
!!! | ATCTTTACTTTTTGCTCTTC+CGG | + | tig0023416:2355-2374 | None:intergenic | 30.0% |
TGAAGAAACATGCTTCAATT+TGG | - | tig0023416:2389-2408 | Msa1408750:intron | 30.0% | |
AATGAGGAGGTAAATACTTA+CGG | + | tig0023416:2495-2514 | None:intergenic | 30.0% | |
! | TTGGATTGATAATAATGAGG+AGG | + | tig0023416:2508-2527 | None:intergenic | 30.0% |
!!! | AGGTTGGTATGAAGATTTTT+AGG | + | tig0023416:2550-2569 | None:intergenic | 30.0% |
!!! | AATCGATATGATTTTTGGTG+GGG | + | tig0023416:2578-2597 | None:intergenic | 30.0% |
!!! | GAATCGATATGATTTTTGGT+GGG | + | tig0023416:2579-2598 | None:intergenic | 30.0% |
!! | AGAATCGATATGATTTTTGG+TGG | + | tig0023416:2580-2599 | None:intergenic | 30.0% |
CTTGAAACATTTAGGTATCT+TGG | + | tig0023416:2673-2692 | None:intergenic | 30.0% | |
! | CTAAATGTTTCAAGTGTCAA+GGG | - | tig0023416:2679-2698 | Msa1408750:CDS | 30.0% |
CTTTATGATTCACACATCTA+AGG | + | tig0023416:2718-2737 | None:intergenic | 30.0% | |
! | ATTTGTGAAGTGTTTGAAGA+AGG | - | tig0023416:2863-2882 | Msa1408750:intron | 30.0% |
! | TTTGTGAAGTGTTTGAAGAA+GGG | - | tig0023416:2864-2883 | Msa1408750:intron | 30.0% |
AACACTTCATGAATGTCATA+GGG | + | tig0023416:2926-2945 | None:intergenic | 30.0% | |
ACGCATTCTTCATCATATAT+TGG | + | tig0023416:2971-2990 | None:intergenic | 30.0% | |
AAAGATTCACCATATTCAGA+AGG | + | tig0023416:2995-3014 | None:intergenic | 30.0% | |
! | AATAATGGAAGCTGTGAAAA+TGG | - | tig0023416:3127-3146 | Msa1408750:intron | 30.0% |
ATCAATGGAAAATGAGACAA+TGG | + | tig0023416:3263-3282 | None:intergenic | 30.0% | |
TTGAATTCATTGAATGGTAG+AGG | + | tig0023416:3442-3461 | None:intergenic | 30.0% | |
AACTTTGTATTCTCCTTGAA+TGG | + | tig0023416:3514-3533 | None:intergenic | 30.0% | |
AAAACTGAAGGATTCCAAAA+TGG | - | tig0023416:3612-3631 | Msa1408750:intron | 30.0% | |
ATAGCTGAATGTGAATTTCT+TGG | - | tig0023416:238-257 | Msa1408750:three_prime_UTR | 30.0% | |
TCAACTGAATATTCAGTTAC+CGG | - | tig0023416:322-341 | Msa1408750:intron | 30.0% | |
TCTTTCCGAATACGATAATA+AGG | - | tig0023416:832-851 | Msa1408750:CDS | 30.0% | |
ATAAACTATTAGGCTCAGTT+TGG | + | tig0023416:968-987 | None:intergenic | 30.0% | |
AAACTGAGCCTAATAGTTTA+TGG | - | tig0023416:967-986 | Msa1408750:intron | 30.0% | |
GTGAAGAACCATAAACTATT+AGG | + | tig0023416:978-997 | None:intergenic | 30.0% | |
ATAGGAATTAGTTAGTTGGT+TGG | - | tig0023416:1190-1209 | Msa1408750:intron | 30.0% | |
TAGGAATTAGTTAGTTGGTT+GGG | - | tig0023416:1191-1210 | Msa1408750:intron | 30.0% | |
AGTATTCTCTAATGTGAAAG+GGG | - | tig0023416:1310-1329 | Msa1408750:CDS | 30.0% | |
AACCCTTTGATAGAGAATTA+TGG | - | tig0023416:1334-1353 | Msa1408750:intron | 30.0% | |
CTCCATAATTCTCTATCAAA+GGG | + | tig0023416:1339-1358 | None:intergenic | 30.0% | |
TCTCCATAATTCTCTATCAA+AGG | + | tig0023416:1340-1359 | None:intergenic | 30.0% | |
AGTTTAAGCGAAGAAATCAA+CGG | - | tig0023416:1751-1770 | Msa1408750:intron | 30.0% | |
TTTCTCAAAACTTCACTTTG+CGG | - | tig0023416:1916-1935 | Msa1408750:intron | 30.0% | |
CTTTAATATCATTCACCTGA+AGG | + | tig0023416:2240-2259 | None:intergenic | 30.0% | |
! | TAGACATTCCAGATTTTGAA+GGG | - | tig0023416:2260-2279 | Msa1408750:intron | 30.0% |
TGAACGTGTATTTGAGTATA+AGG | - | tig0023416:2324-2343 | Msa1408750:intron | 30.0% | |
!!! | ATCTTTACTTTTTGCTCTTC+CGG | + | tig0023416:2355-2374 | None:intergenic | 30.0% |
TGAAGAAACATGCTTCAATT+TGG | - | tig0023416:2389-2408 | Msa1408750:intron | 30.0% | |
AATGAGGAGGTAAATACTTA+CGG | + | tig0023416:2495-2514 | None:intergenic | 30.0% | |
! | TTGGATTGATAATAATGAGG+AGG | + | tig0023416:2508-2527 | None:intergenic | 30.0% |
!!! | GGTTGGTATGAAGATTTTTT+AGG | + | tig0023416:6635-6654 | None:intergenic | 30.0% |
!!! | AATCGATATGATTTTTGGTG+GGG | + | tig0023416:2578-2597 | None:intergenic | 30.0% |
!!! | GAATCGATATGATTTTTGGT+GGG | + | tig0023416:2579-2598 | None:intergenic | 30.0% |
!! | AGAATCGATATGATTTTTGG+TGG | + | tig0023416:2580-2599 | None:intergenic | 30.0% |
CTTGAAACATTTAGGTATCT+TGG | + | tig0023416:2673-2692 | None:intergenic | 30.0% | |
! | CTAAATGTTTCAAGTGTCAA+GGG | - | tig0023416:2679-2698 | Msa1408750:CDS | 30.0% |
CTTTATGATTCACACATCTA+AGG | + | tig0023416:2718-2737 | None:intergenic | 30.0% | |
! | ATTTGTGAAGTGTTTGAAGA+AGG | - | tig0023416:2863-2882 | Msa1408750:intron | 30.0% |
! | TTTGTGAAGTGTTTGAAGAA+GGG | - | tig0023416:2864-2883 | Msa1408750:intron | 30.0% |
AACACTTCATGAATGTCATA+GGG | + | tig0023416:2926-2945 | None:intergenic | 30.0% | |
ACGCATTCTTCATCATATAT+TGG | + | tig0023416:2971-2990 | None:intergenic | 30.0% | |
AAAGATTCACCATATTCAGA+AGG | + | tig0023416:2995-3014 | None:intergenic | 30.0% | |
! | AATAATGGAAGCTGTGAAAA+TGG | - | tig0023416:3127-3146 | Msa1408750:intron | 30.0% |
ATCAATGGAAAATGAGACAA+TGG | + | tig0023416:3263-3282 | None:intergenic | 30.0% | |
TTGAATTCATTGAATGGTAG+AGG | + | tig0023416:3442-3461 | None:intergenic | 30.0% | |
AACTTTGTATTCTCCTTGAA+TGG | + | tig0023416:3514-3533 | None:intergenic | 30.0% | |
AAAACTGAAGGATTCCAAAA+TGG | - | tig0023416:3612-3631 | Msa1408750:intron | 30.0% | |
TGCTCATGATATAATATGGT+TGG | - | tig0023416:8546-8565 | Msa1408750:intron | 30.0% | |
ATACAATCTGTATTCAACAC+AGG | + | tig0023416:9015-9034 | None:intergenic | 30.0% | |
!! | TCTTTTGTTATCAGACCAAA+TGG | - | tig0023416:9301-9320 | Msa1408750:intron | 30.0% |
!! | CTTTTGTTATCAGACCAAAT+GGG | - | tig0023416:9302-9321 | Msa1408750:intron | 30.0% |
ACCAAATGATTATCAGTATC+AGG | - | tig0023416:9496-9515 | Msa1408750:intron | 30.0% | |
TGTAAAGATGACAATATCCA+AGG | - | tig0023416:9578-9597 | Msa1408750:intron | 30.0% | |
GGTTCAGTTTAGTTAAAACA+TGG | - | tig0023416:9749-9768 | Msa1408750:intron | 30.0% | |
GCAAATTTAATTACAGAAGC+TGG | - | tig0023416:9827-9846 | Msa1408750:intron | 30.0% | |
TATTCATAGCATGTTCGTTT+GGG | + | tig0023416:10015-10034 | None:intergenic | 30.0% | |
ATATTCATAGCATGTTCGTT+TGG | + | tig0023416:10016-10035 | None:intergenic | 30.0% | |
! | CATCTAAGAAAAGCAAGTTT+TGG | + | tig0023416:10199-10218 | None:intergenic | 30.0% |
AAAAAATGTTTGCCTGAATG+GGG | + | tig0023416:10239-10258 | None:intergenic | 30.0% | |
!!! | AGGCAAACATTTTTTATTGG+TGG | - | tig0023416:10244-10263 | Msa1408750:intron | 30.0% |
GAATTACATTGACAGTTTCA+AGG | + | tig0023416:10287-10306 | None:intergenic | 30.0% | |
! | ATTGTTGATAAAAGACGTCA+TGG | - | tig0023416:10480-10499 | Msa1408750:intron | 30.0% |
! | TTGTTGATAAAAGACGTCAT+GGG | - | tig0023416:10481-10500 | Msa1408750:intron | 30.0% |
! | TACTTTTCTTAAGATCTCTC+AGG | - | tig0023416:10530-10549 | Msa1408750:intron | 30.0% |
GTCTAGATTGAAGAAACTTT+AGG | - | tig0023416:10608-10627 | Msa1408750:intron | 30.0% | |
! | GCTTTTCTTTTCTATTTCGT+AGG | - | tig0023416:10941-10960 | Msa1408750:intron | 30.0% |
TCAAATGAAAAAGTCGCAAT+AGG | - | tig0023416:11224-11243 | Msa1408750:intron | 30.0% | |
! | AATAAGAAGGTATGTTGCAA+CGG | + | tig0023416:11396-11415 | None:intergenic | 30.0% |
TCAACGAATGACAAATAAGA+AGG | + | tig0023416:11409-11428 | None:intergenic | 30.0% | |
TTATTTGTCATTCGTTGACA+TGG | - | tig0023416:11411-11430 | Msa1408750:intron | 30.0% | |
CAATGCATTTATTGATCAAG+TGG | - | tig0023416:11437-11456 | Msa1408750:intron | 30.0% | |
GACTGATTAATATAAAGCCA+AGG | + | tig0023416:11642-11661 | None:intergenic | 30.0% | |
CAAACAATCAAGAATCTTAG+AGG | + | tig0023416:11718-11737 | None:intergenic | 30.0% | |
GTACGTAACAATAGTGAAAA+GGG | + | tig0023416:12013-12032 | None:intergenic | 30.0% | |
AGTACGTAACAATAGTGAAA+AGG | + | tig0023416:12014-12033 | None:intergenic | 30.0% | |
TGAAGAATGTATTGCAATGA+TGG | - | tig0023416:12188-12207 | Msa1408750:intron | 30.0% | |
ACTGATAAGACAGTTAATTG+GGG | + | tig0023416:12379-12398 | None:intergenic | 30.0% | |
CTACTGATAAGACAGTTAAT+TGG | + | tig0023416:12381-12400 | None:intergenic | 30.0% | |
!!! | AGTAGTCTCCTTTTTTCTAT+TGG | + | tig0023416:12503-12522 | None:intergenic | 30.0% |
ATAAAGTTGAGCATGTAACT+TGG | - | tig0023416:12580-12599 | Msa1408750:intron | 30.0% | |
AATTGAACCTTATTCCAGTT+TGG | - | tig0023416:12832-12851 | Msa1408750:CDS | 30.0% | |
ATTGAACCTTATTCCAGTTT+GGG | - | tig0023416:12833-12852 | Msa1408750:CDS | 30.0% | |
AAACACACTGTAGGTATATT+TGG | - | tig0023416:13015-13034 | Msa1408750:CDS | 30.0% | |
! | TAGGTATATTTGGAATTCAC+AGG | - | tig0023416:13025-13044 | Msa1408750:CDS | 30.0% |
CAAAATTATACTCATCAAGC+GGG | + | tig0023416:13069-13088 | None:intergenic | 30.0% | |
! | ATAGATTGTGTGACTGTTTT+CGG | - | tig0023416:13097-13116 | Msa1408750:five_prime_UTR | 30.0% |
GTAAACGGTTACGCTAAATT+CGG | + | tig0023416:45-64 | None:intergenic | 35.0% | |
GGACATGATGAATGAATGAA+TGG | + | tig0023416:79-98 | None:intergenic | 35.0% | |
GAAAGAAGATTGAAGTAGAG+TGG | + | tig0023416:100-119 | None:intergenic | 35.0% | |
TGTAGTACAATCTGTCAATC+TGG | - | tig0023416:279-298 | Msa1408750:exon | 35.0% | |
CAATCTGTCAATCTGGAAAA+CGG | - | tig0023416:286-305 | Msa1408750:exon | 35.0% | |
GAATATTCAGTTGAACGGTA+CGG | + | tig0023416:316-335 | None:intergenic | 35.0% | |
TTCAATTCCGAGTTATCTAG+TGG | - | tig0023416:354-373 | Msa1408750:intron | 35.0% | |
AGATCATGAATACGAGTGTT+TGG | + | tig0023416:382-401 | None:intergenic | 35.0% | |
! | AATCGTCTTCGTATTTTCTC+TGG | - | tig0023416:412-431 | Msa1408750:intron | 35.0% |
ACATTCTGTACGATCAAGAT+TGG | + | tig0023416:470-489 | None:intergenic | 35.0% | |
TAAATATGACCTGACAAGCA+CGG | - | tig0023416:663-682 | Msa1408750:intron | 35.0% | |
TACCAATCTCACTGTTCATT+AGG | - | tig0023416:1120-1139 | Msa1408750:intron | 35.0% | |
ATCCTAATGAACAGTGAGAT+TGG | + | tig0023416:1125-1144 | None:intergenic | 35.0% | |
TAAATAGCCCTTCATTTCCT+AGG | - | tig0023416:1253-1272 | Msa1408750:intron | 35.0% | |
AGATACTCCTAGGAAATGAA+GGG | + | tig0023416:1263-1282 | None:intergenic | 35.0% | |
AAGATACTCCTAGGAAATGA+AGG | + | tig0023416:1264-1283 | None:intergenic | 35.0% | |
CAATGTTCAAAGATACTCCT+AGG | + | tig0023416:1273-1292 | None:intergenic | 35.0% | |
!! | TAGCATCTCTAGAACTTTCT+AGG | - | tig0023416:1446-1465 | Msa1408750:intron | 35.0% |
TTTGAATGTGCCTAAACACT+TGG | + | tig0023416:1596-1615 | None:intergenic | 35.0% | |
CTTTGTGAAACATCACTTTG+CGG | - | tig0023416:1805-1824 | Msa1408750:intron | 35.0% | |
TGTTTCTTTCGCGAACAAAA+TGG | + | tig0023416:1831-1850 | None:intergenic | 35.0% | |
TCTTCGCTCAAACAAAATGA+AGG | + | tig0023416:1854-1873 | None:intergenic | 35.0% | |
!!! | TGTTTTTTGGGTGAAGATTG+TGG | + | tig0023416:1989-2008 | None:intergenic | 35.0% |
! | GATCTTTCGTTTTGTCTTCT+AGG | + | tig0023416:2052-2071 | None:intergenic | 35.0% |
!! | TATTTGGTGTGCTTCCAATA+AGG | + | tig0023416:2149-2168 | None:intergenic | 35.0% |
AGATTTGAAGATGATGACTC+CGG | - | tig0023416:2169-2188 | Msa1408750:intron | 35.0% | |
TAATATCATTCACCTGAAGG+TGG | + | tig0023416:2237-2256 | None:intergenic | 35.0% | |
! | GTAGACATTCCAGATTTTGA+AGG | - | tig0023416:2259-2278 | Msa1408750:intron | 35.0% |
TGTAGATTCCCTTCAAAATC+TGG | + | tig0023416:2271-2290 | None:intergenic | 35.0% | |
!! | TTTTGAAGGGAATCTACAAC+CGG | - | tig0023416:2273-2292 | Msa1408750:intron | 35.0% |
AACCAATCCAGAAAATCATC+CGG | + | tig0023416:2295-2314 | None:intergenic | 35.0% | |
ACGTGTATTTGAGTATAAGG+AGG | - | tig0023416:2327-2346 | Msa1408750:intron | 35.0% | |
ATTTGAGTATAAGGAGGTTC+CGG | - | tig0023416:2333-2352 | Msa1408750:intron | 35.0% | |
AGAAACATGCTTCAATTTGG+TGG | - | tig0023416:2392-2411 | Msa1408750:intron | 35.0% | |
GAAACATGCTTCAATTTGGT+GGG | - | tig0023416:2393-2412 | Msa1408750:intron | 35.0% | |
TTTGGTGGGAAAATCTCAAA+AGG | - | tig0023416:2407-2426 | Msa1408750:intron | 35.0% | |
AAAAGGAGACGTAAGTATGA+AGG | - | tig0023416:2424-2443 | Msa1408750:CDS | 35.0% | |
AAAGGAGACGTAAGTATGAA+GGG | - | tig0023416:2425-2444 | Msa1408750:CDS | 35.0% | |
!!! | ATCGATATGATTTTTGGTGG+GGG | + | tig0023416:2577-2596 | None:intergenic | 35.0% |
GTTTGAATGAGGAAATAGGT+TGG | + | tig0023416:2620-2639 | None:intergenic | 35.0% | |
ATTATGTTGGGGTTTGAATG+AGG | + | tig0023416:2631-2650 | None:intergenic | 35.0% | |
CCTTGACACTTGAAACATTT+AGG | + | tig0023416:2681-2700 | None:intergenic | 35.0% | |
! | CCTAAATGTTTCAAGTGTCA+AGG | - | tig0023416:2678-2697 | Msa1408750:CDS | 35.0% |
! | TTGTGAAGTGTTTGAAGAAG+GGG | - | tig0023416:2865-2884 | Msa1408750:intron | 35.0% |
CAACACTTCATGAATGTCAT+AGG | + | tig0023416:2927-2946 | None:intergenic | 35.0% | |
CTATGACATTCATGAAGTGT+TGG | - | tig0023416:2925-2944 | Msa1408750:intron | 35.0% | |
ATTGTAGATTGTACGGATGT+GGG | + | tig0023416:3201-3220 | None:intergenic | 35.0% | |
!! | TTGAGGCATTGTAGATTGTA+CGG | + | tig0023416:3208-3227 | None:intergenic | 35.0% |
TTACCTCATTATCCTTGTTG+AGG | + | tig0023416:3225-3244 | None:intergenic | 35.0% | |
ATACTTGCCACATTCATCTT+GGG | - | tig0023416:3326-3345 | Msa1408750:CDS | 35.0% | |
TTTGAGTCCAAAGTAATCCA+TGG | + | tig0023416:3594-3613 | None:intergenic | 35.0% | |
ACTTTGGACTCAAAAACTGA+AGG | - | tig0023416:3600-3619 | Msa1408750:intron | 35.0% | |
! | CTTGTCTTTGACTACCATTT+TGG | + | tig0023416:3629-3648 | None:intergenic | 35.0% |
TTTCATCATATGGTAGACGA+AGG | - | tig0023416:3666-3685 | Msa1408750:intron | 35.0% | |
!! | AAGGAAGAAATATTGACTCG+AGG | - | tig0023416:3685-3704 | Msa1408750:intron | 35.0% |
TAATTCTCTATCATTCTCCC+CGG | + | tig0023416:3727-3746 | None:intergenic | 35.0% | |
GGGAGAATGATAGAGAATTA+TGG | - | tig0023416:3727-3746 | Msa1408750:intron | 35.0% | |
!! | TAGCATCTCTAGAACTTTCT+AGG | - | tig0023416:1446-1465 | Msa1408750:intron | 35.0% |
TTTGAATGTGCCTAAACACT+TGG | + | tig0023416:1596-1615 | None:intergenic | 35.0% | |
!!! | ATATTGGTTTTCTCCTCCAA+GGG | + | tig0023416:4109-4128 | None:intergenic | 35.0% |
!!! | TATATTGGTTTTCTCCTCCA+AGG | + | tig0023416:4110-4129 | None:intergenic | 35.0% |
TGTAGTACAATCTGTCAATC+TGG | - | tig0023416:279-298 | Msa1408750:exon | 35.0% | |
CAATCTGTCAATCTGGAAAA+CGG | - | tig0023416:286-305 | Msa1408750:exon | 35.0% | |
GAATATTCAGTTGAACGGTA+CGG | + | tig0023416:316-335 | None:intergenic | 35.0% | |
TTCAATTCCGAGTTATCTAG+TGG | - | tig0023416:354-373 | Msa1408750:intron | 35.0% | |
AGATCATGAATACGAGTGTT+TGG | + | tig0023416:382-401 | None:intergenic | 35.0% | |
! | AATCGTCTTCGTATTTTCTC+TGG | - | tig0023416:412-431 | Msa1408750:intron | 35.0% |
ACATTCTGTACGATCAAGAT+TGG | + | tig0023416:470-489 | None:intergenic | 35.0% | |
TAAATATGACCTGACAAGCA+CGG | - | tig0023416:663-682 | Msa1408750:intron | 35.0% | |
TACCAATCTCACTGTTCATT+AGG | - | tig0023416:1120-1139 | Msa1408750:intron | 35.0% | |
ATCCTAATGAACAGTGAGAT+TGG | + | tig0023416:1125-1144 | None:intergenic | 35.0% | |
TAAATAGCCCTTCATTTCCT+AGG | - | tig0023416:1253-1272 | Msa1408750:intron | 35.0% | |
AGATACTCCTAGGAAATGAA+GGG | + | tig0023416:1263-1282 | None:intergenic | 35.0% | |
AAGATACTCCTAGGAAATGA+AGG | + | tig0023416:1264-1283 | None:intergenic | 35.0% | |
CAATGTTCAAAGATACTCCT+AGG | + | tig0023416:1273-1292 | None:intergenic | 35.0% | |
!! | TAGCATCTCTAGAACTTTCT+AGG | - | tig0023416:1446-1465 | Msa1408750:intron | 35.0% |
TTTGAATGTGCCTAAACACT+TGG | + | tig0023416:1596-1615 | None:intergenic | 35.0% | |
CTTTGTGAAACATCACTTTG+CGG | - | tig0023416:1805-1824 | Msa1408750:intron | 35.0% | |
TGTTTCTTTCGCGAACAAAA+TGG | + | tig0023416:1831-1850 | None:intergenic | 35.0% | |
TCTTCGCTCAAACAAAATGA+AGG | + | tig0023416:1854-1873 | None:intergenic | 35.0% | |
!!! | TGTTTTTTGGGTGAAGATTG+TGG | + | tig0023416:1989-2008 | None:intergenic | 35.0% |
! | GATCTTTCGTTTTGTCTTCT+AGG | + | tig0023416:2052-2071 | None:intergenic | 35.0% |
!! | TATTTGGTGTGCTTCCAATA+AGG | + | tig0023416:2149-2168 | None:intergenic | 35.0% |
AGATTTGAAGATGATGACTC+CGG | - | tig0023416:2169-2188 | Msa1408750:intron | 35.0% | |
TAATATCATTCACCTGAAGG+TGG | + | tig0023416:2237-2256 | None:intergenic | 35.0% | |
! | GTAGACATTCCAGATTTTGA+AGG | - | tig0023416:2259-2278 | Msa1408750:intron | 35.0% |
TGTAGATTCCCTTCAAAATC+TGG | + | tig0023416:2271-2290 | None:intergenic | 35.0% | |
!! | TTTTGAAGGGAATCTACAAC+CGG | - | tig0023416:2273-2292 | Msa1408750:intron | 35.0% |
AACCAATCCAGAAAATCATC+CGG | + | tig0023416:2295-2314 | None:intergenic | 35.0% | |
ACGTGTATTTGAGTATAAGG+AGG | - | tig0023416:2327-2346 | Msa1408750:intron | 35.0% | |
ATTTGAGTATAAGGAGGTTC+CGG | - | tig0023416:2333-2352 | Msa1408750:intron | 35.0% | |
AGAAACATGCTTCAATTTGG+TGG | - | tig0023416:2392-2411 | Msa1408750:intron | 35.0% | |
GAAACATGCTTCAATTTGGT+GGG | - | tig0023416:2393-2412 | Msa1408750:intron | 35.0% | |
TTTGGTGGGAAAATCTCAAA+AGG | - | tig0023416:2407-2426 | Msa1408750:intron | 35.0% | |
AAAAGGAGACGTAAGTATGA+AGG | - | tig0023416:2424-2443 | Msa1408750:CDS | 35.0% | |
AAAGGAGACGTAAGTATGAA+GGG | - | tig0023416:2425-2444 | Msa1408750:CDS | 35.0% | |
GTTTGAATGAGGAAATAGGT+TGG | + | tig0023416:2620-2639 | None:intergenic | 35.0% | |
ATTATGTTGGGGTTTGAATG+AGG | + | tig0023416:2631-2650 | None:intergenic | 35.0% | |
CCTTGACACTTGAAACATTT+AGG | + | tig0023416:2681-2700 | None:intergenic | 35.0% | |
! | CCTAAATGTTTCAAGTGTCA+AGG | - | tig0023416:2678-2697 | Msa1408750:CDS | 35.0% |
! | TTGTGAAGTGTTTGAAGAAG+GGG | - | tig0023416:2865-2884 | Msa1408750:intron | 35.0% |
CAACACTTCATGAATGTCAT+AGG | + | tig0023416:2927-2946 | None:intergenic | 35.0% | |
CTATGACATTCATGAAGTGT+TGG | - | tig0023416:2925-2944 | Msa1408750:intron | 35.0% | |
ATTGTAGATTGTACGGATGT+GGG | + | tig0023416:3201-3220 | None:intergenic | 35.0% | |
!! | TTGAGGCATTGTAGATTGTA+CGG | + | tig0023416:3208-3227 | None:intergenic | 35.0% |
TTACCTCATTATCCTTGTTG+AGG | + | tig0023416:3225-3244 | None:intergenic | 35.0% | |
ATACTTGCCACATTCATCTT+GGG | - | tig0023416:3326-3345 | Msa1408750:CDS | 35.0% | |
TTTGAGTCCAAAGTAATCCA+TGG | + | tig0023416:3594-3613 | None:intergenic | 35.0% | |
ACTTTGGACTCAAAAACTGA+AGG | - | tig0023416:3600-3619 | Msa1408750:intron | 35.0% | |
! | CTTGTCTTTGACTACCATTT+TGG | + | tig0023416:3629-3648 | None:intergenic | 35.0% |
TTTCATCATATGGTAGACGA+AGG | - | tig0023416:3666-3685 | Msa1408750:intron | 35.0% | |
!! | AAGGAAGAAATATTGACTCG+AGG | - | tig0023416:3685-3704 | Msa1408750:intron | 35.0% |
TAATTCTCTATCATTCTCCC+CGG | + | tig0023416:3727-3746 | None:intergenic | 35.0% | |
GGGAGAATGATAGAGAATTA+TGG | - | tig0023416:3727-3746 | Msa1408750:intron | 35.0% | |
!! | TAGCATCTCTAGAACTTTCT+AGG | - | tig0023416:1446-1465 | Msa1408750:intron | 35.0% |
TTTGAATGTGCCTAAACACT+TGG | + | tig0023416:1596-1615 | None:intergenic | 35.0% | |
!!! | ATATTGGTTTTCTCCTCCAA+GGG | + | tig0023416:4109-4128 | None:intergenic | 35.0% |
!!! | TATATTGGTTTTCTCCTCCA+AGG | + | tig0023416:4110-4129 | None:intergenic | 35.0% |
! | GTTTTTCTGAGCTTAACTAC+TGG | + | tig0023416:8491-8510 | None:intergenic | 35.0% |
GAAATTTCTCTACAAGGACA+TGG | + | tig0023416:8515-8534 | None:intergenic | 35.0% | |
! | TCTTAATTTTTCCCAGATCC+AGG | + | tig0023416:8708-8727 | None:intergenic | 35.0% |
! | AAGATAAAACGTTTTGCCGA+TGG | - | tig0023416:8724-8743 | Msa1408750:CDS | 35.0% |
! | AGATAAAACGTTTTGCCGAT+GGG | - | tig0023416:8725-8744 | Msa1408750:CDS | 35.0% |
! | ACTGCAGTCATTCCATATTT+TGG | - | tig0023416:8889-8908 | Msa1408750:intron | 35.0% |
GCTCTAGCATATCCAAAATA+TGG | + | tig0023416:8904-8923 | None:intergenic | 35.0% | |
ATATGCTAGAGCTGATAGAA+AGG | - | tig0023416:8912-8931 | Msa1408750:intron | 35.0% | |
TGATAGAAAAGTCTCCCATT+TGG | + | tig0023416:9319-9338 | None:intergenic | 35.0% | |
!! | TAAGCTTTTGGGAGAGTTTA+TGG | + | tig0023416:9343-9362 | None:intergenic | 35.0% |
GCCTGATACTGATAATCATT+TGG | + | tig0023416:9500-9519 | None:intergenic | 35.0% | |
GATACAGAGATATGCCAAAA+AGG | + | tig0023416:9548-9567 | None:intergenic | 35.0% | |
CATATCTCTGTATCATACTG+TGG | - | tig0023416:9554-9573 | Msa1408750:intron | 35.0% | |
AACTACTGTTTCAGACTCAA+GGG | - | tig0023416:9777-9796 | Msa1408750:intron | 35.0% | |
ATTCCAGTTGATCATGTGTA+TGG | - | tig0023416:9908-9927 | Msa1408750:intron | 35.0% | |
CATCACAATTCTGAACAGAA+AGG | - | tig0023416:10094-10113 | Msa1408750:intron | 35.0% | |
AATTCTGAACAGAAAGGACA+AGG | - | tig0023416:10100-10119 | Msa1408750:intron | 35.0% | |
AAAAATGTTTGCCTGAATGG+GGG | + | tig0023416:10238-10257 | None:intergenic | 35.0% | |
TACATTGACAGTTTCAAGGT+AGG | + | tig0023416:10283-10302 | None:intergenic | 35.0% | |
! | ATCTGAACAAATAGTCTTGC+TGG | + | tig0023416:10376-10395 | None:intergenic | 35.0% |
!!! | AGGAGCATCAGATAACTTTT+TGG | + | tig0023416:10454-10473 | None:intergenic | 35.0% |
! | TTGGATGAATCTCATTTTGC+AGG | - | tig0023416:10640-10659 | Msa1408750:intron | 35.0% |
TTGCAGGTGATGAATTTGAT+TGG | - | tig0023416:10656-10675 | Msa1408750:intron | 35.0% | |
!! | GATTGGTGATGTAAAAGGAA+AGG | - | tig0023416:10673-10692 | Msa1408750:intron | 35.0% |
CAGTCAGCAAAACATATAAG+AGG | + | tig0023416:10858-10877 | None:intergenic | 35.0% | |
! | TTCAGAAACTCAATGGATTC+AGG | + | tig0023416:11074-11093 | None:intergenic | 35.0% |
ACAATAGTGAGATCCTAATC+AGG | - | tig0023416:11139-11158 | Msa1408750:intron | 35.0% | |
! | CATTCCTTGACACAGTTTTA+AGG | - | tig0023416:11309-11328 | Msa1408750:intron | 35.0% |
ATCTATTGAGATAGACGCAA+TGG | - | tig0023416:11333-11352 | Msa1408750:intron | 35.0% | |
TCTATTGAGATAGACGCAAT+GGG | - | tig0023416:11334-11353 | Msa1408750:intron | 35.0% | |
ACCTGACAGATTAAACATGA+TGG | - | tig0023416:11610-11629 | Msa1408750:intron | 35.0% | |
ACCATCATGTTTAATCTGTC+AGG | + | tig0023416:11614-11633 | None:intergenic | 35.0% | |
! | ATCTTAGAGGTATATCGAAG+CGG | + | tig0023416:11705-11724 | None:intergenic | 35.0% |
CACTTGAATCGTGTTAATTG+TGG | - | tig0023416:11960-11979 | Msa1408750:intron | 35.0% | |
TAGATTGATCTCAAGAGTTG+TGG | - | tig0023416:12045-12064 | Msa1408750:intron | 35.0% | |
AGAGTGTGTTAAGTATGTCT+GGG | - | tig0023416:12070-12089 | Msa1408750:intron | 35.0% | |
CTGATAAGACAGTTAATTGG+GGG | + | tig0023416:12378-12397 | None:intergenic | 35.0% | |
TTATCAGTAGCAAACCTTCT+GGG | - | tig0023416:12391-12410 | Msa1408750:intron | 35.0% | |
TGTATGTAAGCATGCAAGTA+TGG | + | tig0023416:12528-12547 | None:intergenic | 35.0% | |
! | TGCTCTGTTTTATCTTTGTC+AGG | - | tig0023416:12805-12824 | Msa1408750:CDS | 35.0% |
! | GCTCTGTTTTATCTTTGTCA+GGG | - | tig0023416:12806-12825 | Msa1408750:CDS | 35.0% |
!! | ATACCTTTTAGAGAGCTGTT+TGG | - | tig0023416:12973-12992 | Msa1408750:CDS | 35.0% |
!! | TACCTTTTAGAGAGCTGTTT+GGG | - | tig0023416:12974-12993 | Msa1408750:CDS | 35.0% |
GTACTTGAAAAACACACTGT+AGG | - | tig0023416:13006-13025 | Msa1408750:CDS | 35.0% | |
CTAAATTCGGAAGGAGGATT+AGG | + | tig0023416:32-51 | None:intergenic | 40.0% | |
ATGGCGTAACACTCAGTAAA+CGG | + | tig0023416:60-79 | None:intergenic | 40.0% | |
ACTGAATATTCAGTTACCGG+TGG | - | tig0023416:325-344 | Msa1408750:intron | 40.0% | |
AGCTGAGTCAGATTATAGTG+CGG | - | tig0023416:571-590 | Msa1408750:intron | 40.0% | |
AAATATGACCTGACAAGCAC+GGG | - | tig0023416:664-683 | Msa1408750:intron | 40.0% | |
TGTCAACTAGCTATGAAGCA+TGG | + | tig0023416:785-804 | None:intergenic | 40.0% | |
GGTCATACGAGCTTATAAGT+TGG | - | tig0023416:937-956 | Msa1408750:intron | 40.0% | |
! | AAATCTGGTTCAGGGACAAA+AGG | + | tig0023416:1698-1717 | None:intergenic | 40.0% |
! | TTTTGTCCCTGAACCAGATT+TGG | - | tig0023416:1697-1716 | Msa1408750:intron | 40.0% |
!!! | AGTGAGTTTTCAAGTGAGCA+AGG | - | tig0023416:1776-1795 | Msa1408750:intron | 40.0% |
CGCAAAGTGATGTTTCACAA+AGG | + | tig0023416:1807-1826 | None:intergenic | 40.0% | |
!!! | TGAGTTTTCAAGTGAGAGCA+AGG | - | tig0023416:1887-1906 | Msa1408750:intron | 40.0% |
!!! | TTTTTGGGTGAAGATTGTGG+CGG | + | tig0023416:1986-2005 | None:intergenic | 40.0% |
!! | TCTAGGTGGCATTTTGACAA+TGG | + | tig0023416:2035-2054 | None:intergenic | 40.0% |
! | CTTTCGTTTTGTCTTCTAGG+TGG | + | tig0023416:2049-2068 | None:intergenic | 40.0% |
GCGACAAATTCAACTACTAC+AGG | - | tig0023416:2102-2121 | Msa1408750:intron | 40.0% | |
AGATGATGAAGAGTCACTAC+CGG | + | tig0023416:2191-2210 | None:intergenic | 40.0% | |
! | TCTACAACCGGATGATTTTC+TGG | - | tig0023416:2285-2304 | Msa1408750:intron | 40.0% |
! | AACCGGATGATTTTCTGGAT+TGG | - | tig0023416:2290-2309 | Msa1408750:intron | 40.0% |
TGAAGCATGTTTCTTCAGCT+TGG | + | tig0023416:2386-2405 | None:intergenic | 40.0% | |
!! | GAATGAGGAAATAGGTTGGT+GGG | + | tig0023416:2616-2635 | None:intergenic | 40.0% |
! | TGAATGAGGAAATAGGTTGG+TGG | + | tig0023416:2617-2636 | None:intergenic | 40.0% |
TGGGGTTTGAATGAGGAAAT+AGG | + | tig0023416:2624-2643 | None:intergenic | 40.0% | |
! | TGTTTCAAGTGTCAAGGGTA+TGG | - | tig0023416:2684-2703 | Msa1408750:CDS | 40.0% |
AGTATTCACCATCGTCAATG+AGG | - | tig0023416:2736-2755 | Msa1408750:CDS | 40.0% | |
GTTTATCTCCTCATTGACGA+TGG | + | tig0023416:2747-2766 | None:intergenic | 40.0% | |
ATCATTTGAAGATGAGACGC+TGG | - | tig0023416:2802-2821 | Msa1408750:intron | 40.0% | |
TCATTTGAAGATGAGACGCT+GGG | - | tig0023416:2803-2822 | Msa1408750:intron | 40.0% | |
! | TGTGAAGTGTTTGAAGAAGG+GGG | - | tig0023416:2866-2885 | Msa1408750:intron | 40.0% |
!! | TCATGAAGTGTTGGAACAAG+AGG | - | tig0023416:2934-2953 | Msa1408750:intron | 40.0% |
GAATGCGTTCCTTCTGAATA+TGG | - | tig0023416:2983-3002 | Msa1408750:intron | 40.0% | |
ATCACAAAACTTACCTTGCG+AGG | + | tig0023416:3098-3117 | None:intergenic | 40.0% | |
CATTGTAGATTGTACGGATG+TGG | + | tig0023416:3202-3221 | None:intergenic | 40.0% | |
CAATCTACAATGCCTCAACA+AGG | - | tig0023416:3210-3229 | Msa1408750:intron | 40.0% | |
ATGCCTCAACAAGGATAATG+AGG | - | tig0023416:3219-3238 | Msa1408750:CDS | 40.0% | |
ACGGTGTGATGTTATTCCAA+TGG | - | tig0023416:3303-3322 | Msa1408750:CDS | 40.0% | |
TGAATGTGGCAAGTATCCAT+TGG | + | tig0023416:3322-3341 | None:intergenic | 40.0% | |
GATACTTGCCACATTCATCT+TGG | - | tig0023416:3325-3344 | Msa1408750:CDS | 40.0% | |
! | CTTCACAAAAGTGTGGATGT+TGG | + | tig0023416:3395-3414 | None:intergenic | 40.0% |
! | CAACATCCACACTTTTGTGA+AGG | - | tig0023416:3393-3412 | Msa1408750:intron | 40.0% |
TCACATCCTTCACAAAAGTG+TGG | + | tig0023416:3402-3421 | None:intergenic | 40.0% | |
AAAGAGGAGTTCAAGCTACT+TGG | - | tig0023416:3469-3488 | Msa1408750:intron | 40.0% | |
TTCTCCTTGAATGGTTCCTT+TGG | + | tig0023416:3505-3524 | None:intergenic | 40.0% | |
TCAATAGTAACATCCTCCCA+AGG | + | tig0023416:3565-3584 | None:intergenic | 40.0% | |
AATTCTCTATCATTCTCCCC+GGG | + | tig0023416:3726-3745 | None:intergenic | 40.0% | |
ACTGAATATTCAGTTACCGG+TGG | - | tig0023416:325-344 | Msa1408750:intron | 40.0% | |
AGCTGAGTCAGATTATAGTG+CGG | - | tig0023416:571-590 | Msa1408750:intron | 40.0% | |
AAATATGACCTGACAAGCAC+GGG | - | tig0023416:664-683 | Msa1408750:intron | 40.0% | |
TGTCAACTAGCTATGAAGCA+TGG | + | tig0023416:785-804 | None:intergenic | 40.0% | |
GGTCATACGAGCTTATAAGT+TGG | - | tig0023416:937-956 | Msa1408750:intron | 40.0% | |
! | AAATCTGGTTCAGGGACAAA+AGG | + | tig0023416:1698-1717 | None:intergenic | 40.0% |
! | TTTTGTCCCTGAACCAGATT+TGG | - | tig0023416:1697-1716 | Msa1408750:intron | 40.0% |
!!! | AGTGAGTTTTCAAGTGAGCA+AGG | - | tig0023416:1776-1795 | Msa1408750:intron | 40.0% |
CGCAAAGTGATGTTTCACAA+AGG | + | tig0023416:1807-1826 | None:intergenic | 40.0% | |
!!! | TGAGTTTTCAAGTGAGAGCA+AGG | - | tig0023416:1887-1906 | Msa1408750:intron | 40.0% |
!!! | TTTTTGGGTGAAGATTGTGG+CGG | + | tig0023416:1986-2005 | None:intergenic | 40.0% |
!! | TCTAGGTGGCATTTTGACAA+TGG | + | tig0023416:2035-2054 | None:intergenic | 40.0% |
! | CTTTCGTTTTGTCTTCTAGG+TGG | + | tig0023416:2049-2068 | None:intergenic | 40.0% |
GCGACAAATTCAACTACTAC+AGG | - | tig0023416:2102-2121 | Msa1408750:intron | 40.0% | |
AGATGATGAAGAGTCACTAC+CGG | + | tig0023416:2191-2210 | None:intergenic | 40.0% | |
! | TCTACAACCGGATGATTTTC+TGG | - | tig0023416:2285-2304 | Msa1408750:intron | 40.0% |
! | AACCGGATGATTTTCTGGAT+TGG | - | tig0023416:2290-2309 | Msa1408750:intron | 40.0% |
TGAAGCATGTTTCTTCAGCT+TGG | + | tig0023416:2386-2405 | None:intergenic | 40.0% | |
!!! | ATGATTTTTGGTGGGGAAAG+AGG | + | tig0023416:6656-6675 | None:intergenic | 40.0% |
!! | GAATGAGGAAATAGGTTGGT+GGG | + | tig0023416:2616-2635 | None:intergenic | 40.0% |
! | TGAATGAGGAAATAGGTTGG+TGG | + | tig0023416:2617-2636 | None:intergenic | 40.0% |
TGGGGTTTGAATGAGGAAAT+AGG | + | tig0023416:2624-2643 | None:intergenic | 40.0% | |
! | TGTTTCAAGTGTCAAGGGTA+TGG | - | tig0023416:2684-2703 | Msa1408750:CDS | 40.0% |
AGTATTCACCATCGTCAATG+AGG | - | tig0023416:2736-2755 | Msa1408750:CDS | 40.0% | |
GTTTATCTCCTCATTGACGA+TGG | + | tig0023416:2747-2766 | None:intergenic | 40.0% | |
ATCATTTGAAGATGAGACGC+TGG | - | tig0023416:2802-2821 | Msa1408750:intron | 40.0% | |
TCATTTGAAGATGAGACGCT+GGG | - | tig0023416:2803-2822 | Msa1408750:intron | 40.0% | |
! | TGTGAAGTGTTTGAAGAAGG+GGG | - | tig0023416:2866-2885 | Msa1408750:intron | 40.0% |
!! | TCATGAAGTGTTGGAACAAG+AGG | - | tig0023416:2934-2953 | Msa1408750:intron | 40.0% |
GAATGCGTTCCTTCTGAATA+TGG | - | tig0023416:2983-3002 | Msa1408750:intron | 40.0% | |
ATCACAAAACTTACCTTGCG+AGG | + | tig0023416:3098-3117 | None:intergenic | 40.0% | |
CATTGTAGATTGTACGGATG+TGG | + | tig0023416:3202-3221 | None:intergenic | 40.0% | |
CAATCTACAATGCCTCAACA+AGG | - | tig0023416:3210-3229 | Msa1408750:intron | 40.0% | |
ATGCCTCAACAAGGATAATG+AGG | - | tig0023416:3219-3238 | Msa1408750:CDS | 40.0% | |
ACGGTGTGATGTTATTCCAA+TGG | - | tig0023416:3303-3322 | Msa1408750:CDS | 40.0% | |
TGAATGTGGCAAGTATCCAT+TGG | + | tig0023416:3322-3341 | None:intergenic | 40.0% | |
GATACTTGCCACATTCATCT+TGG | - | tig0023416:3325-3344 | Msa1408750:CDS | 40.0% | |
! | CTTCACAAAAGTGTGGATGT+TGG | + | tig0023416:3395-3414 | None:intergenic | 40.0% |
! | CAACATCCACACTTTTGTGA+AGG | - | tig0023416:3393-3412 | Msa1408750:intron | 40.0% |
TCACATCCTTCACAAAAGTG+TGG | + | tig0023416:3402-3421 | None:intergenic | 40.0% | |
AAAGAGGAGTTCAAGCTACT+TGG | - | tig0023416:3469-3488 | Msa1408750:intron | 40.0% | |
TTCTCCTTGAATGGTTCCTT+TGG | + | tig0023416:3505-3524 | None:intergenic | 40.0% | |
TCAATAGTAACATCCTCCCA+AGG | + | tig0023416:3565-3584 | None:intergenic | 40.0% | |
AATTCTCTATCATTCTCCCC+GGG | + | tig0023416:3726-3745 | None:intergenic | 40.0% | |
AATTGCATGTTATATGGGCC+TGG | - | tig0023416:8687-8706 | Msa1408750:CDS | 40.0% | |
! | GATAAAACGTTTTGCCGATG+GGG | - | tig0023416:8726-8745 | Msa1408750:CDS | 40.0% |
TTGGACATATATCTCCCCAT+CGG | + | tig0023416:8743-8762 | None:intergenic | 40.0% | |
TCCATAAGATTCTCATTCGC+GGG | + | tig0023416:8820-8839 | None:intergenic | 40.0% | |
CTCCATAAGATTCTCATTCG+CGG | + | tig0023416:8821-8840 | None:intergenic | 40.0% | |
TAGCTAGCGGTTATCAGTAA+TGG | + | tig0023416:9259-9278 | None:intergenic | 40.0% | |
AACGCAAATGAAGTAGCTAG+CGG | + | tig0023416:9272-9291 | None:intergenic | 40.0% | |
TCCCAAAAGCTTAACCTGTT+GGG | - | tig0023416:9350-9369 | Msa1408750:intron | 40.0% | |
! | ACCCAACAGGTTAAGCTTTT+GGG | + | tig0023416:9354-9373 | None:intergenic | 40.0% |
! | AACCCAACAGGTTAAGCTTT+TGG | + | tig0023416:9355-9374 | None:intergenic | 40.0% |
AAGCTTAACCTGTTGGGTTA+AGG | - | tig0023416:9356-9375 | Msa1408750:intron | 40.0% | |
TGGTCTAATCACTAATGCCT+TGG | + | tig0023416:9598-9617 | None:intergenic | 40.0% | |
AGATGCATGTAGAACGTGAT+TGG | + | tig0023416:9618-9637 | None:intergenic | 40.0% | |
CAACTACTGTTTCAGACTCA+AGG | - | tig0023416:9776-9795 | Msa1408750:intron | 40.0% | |
TGTCCATACACATGATCAAC+TGG | + | tig0023416:9914-9933 | None:intergenic | 40.0% | |
AGTTGATCATGTGTATGGAC+AGG | - | tig0023416:9913-9932 | Msa1408750:intron | 40.0% | |
AAACATTCTTACCCCCATTC+AGG | - | tig0023416:10224-10243 | Msa1408750:intron | 40.0% | |
GCAAGGTAATCGAGTATAAC+AGG | + | tig0023416:10354-10373 | None:intergenic | 40.0% | |
! | AACAAATAGTCTTGCTGGCA+AGG | + | tig0023416:10371-10390 | None:intergenic | 40.0% |
AAAAGGAAAGGTAGCAGTGA+TGG | - | tig0023416:10685-10704 | Msa1408750:intron | 40.0% | |
GATGACATGATTGATACTGC+TGG | - | tig0023416:10710-10729 | Msa1408750:intron | 40.0% | |
TGTCTCTATGACCCTTAGAT+CGG | - | tig0023416:10777-10796 | Msa1408750:intron | 40.0% | |
TGTATTTCCATGTGCAATGC+AGG | - | tig0023416:11195-11214 | Msa1408750:intron | 40.0% | |
ATAACATCCTGCATTGCACA+TGG | + | tig0023416:11205-11224 | None:intergenic | 40.0% | |
GATGCCTTAAAACTGTGTCA+AGG | + | tig0023416:11316-11335 | None:intergenic | 40.0% | |
!! | GTGCATTGCACTCTAAAGTT+TGG | + | tig0023416:11542-11561 | None:intergenic | 40.0% |
AAACATGATGGTTGCTTCCT+TGG | - | tig0023416:11622-11641 | Msa1408750:intron | 40.0% | |
AATTCTCTCTTGCTACAGCT+TGG | - | tig0023416:11742-11761 | Msa1408750:intron | 40.0% | |
! | CAGCTCTTTTGCATCAAGAA+GGG | - | tig0023416:11836-11855 | Msa1408750:intron | 40.0% |
! | AGCTCTTTTGCATCAAGAAG+GGG | - | tig0023416:11837-11856 | Msa1408750:intron | 40.0% |
! | AATTTGTGGTTTGTGCTGCT+AGG | - | tig0023416:11937-11956 | Msa1408750:intron | 40.0% |
! | GAGAGTGTGTTAAGTATGTC+TGG | - | tig0023416:12069-12088 | Msa1408750:intron | 40.0% |
ACAATCTCTCTATAGCAGGA+GGG | + | tig0023416:12291-12310 | None:intergenic | 40.0% | |
CTTGACAATCTCTCTATAGC+AGG | + | tig0023416:12295-12314 | None:intergenic | 40.0% | |
GCTATAGAGAGATTGTCAAG+CGG | - | tig0023416:12295-12314 | Msa1408750:intron | 40.0% | |
AAGTAGTTCTTCTCTGCTAG+TGG | + | tig0023416:12355-12374 | None:intergenic | 40.0% | |
CTTATCAGTAGCAAACCTTC+TGG | - | tig0023416:12390-12409 | Msa1408750:intron | 40.0% | |
! | CTGTTTTATCTTTGTCAGGG+TGG | - | tig0023416:12809-12828 | Msa1408750:CDS | 40.0% |
GTTACTGCAGTATCATAAGC+TGG | + | tig0023416:12898-12917 | None:intergenic | 40.0% | |
GATACTGCAGTAACAAGAAG+TGG | - | tig0023416:12904-12923 | Msa1408750:intron | 40.0% | |
TACCCAAACAGCTCTCTAAA+AGG | + | tig0023416:12979-12998 | None:intergenic | 40.0% | |
ATTCGGAAGGAGGATTAGGT+GGG | + | tig0023416:28-47 | None:intergenic | 45.0% | |
AATTCGGAAGGAGGATTAGG+TGG | + | tig0023416:29-48 | None:intergenic | 45.0% | |
GTTACGCTAAATTCGGAAGG+AGG | + | tig0023416:38-57 | None:intergenic | 45.0% | |
ACGGTTACGCTAAATTCGGA+AGG | + | tig0023416:41-60 | None:intergenic | 45.0% | |
GAGAGAGTTACTTACGACGA+CGG | + | tig0023416:184-203 | None:intergenic | 45.0% | |
CGGAATTGAACTTGTACCAC+CGG | + | tig0023416:344-363 | None:intergenic | 45.0% | |
TTTGGCGCCACTAGATAACT+CGG | + | tig0023416:364-383 | None:intergenic | 45.0% | |
AGTCAGATTATAGTGCGGTG+CGG | - | tig0023416:576-595 | Msa1408750:intron | 45.0% | |
CTATTAGGCTCAGTTTGGCA+AGG | + | tig0023416:963-982 | None:intergenic | 45.0% | |
GAATGTGCCTAAACACTTGG+TGG | + | tig0023416:1593-1612 | None:intergenic | 45.0% | |
TGGTTCAGGGACAAAAGGAA+AGG | + | tig0023416:1693-1712 | None:intergenic | 45.0% | |
! | CTGATGCCAAATCTGGTTCA+GGG | + | tig0023416:1706-1725 | None:intergenic | 45.0% |
! | TCTGATGCCAAATCTGGTTC+AGG | + | tig0023416:1707-1726 | None:intergenic | 45.0% |
TTCGCTTAAACTCAACTCCG+AGG | + | tig0023416:1743-1762 | None:intergenic | 45.0% | |
! | GTGTTAGCTTCGCGAACAAA+TGG | + | tig0023416:1942-1961 | None:intergenic | 45.0% |
!! | GGTGGCATTTTGACAATGGT+GGG | + | tig0023416:2031-2050 | None:intergenic | 45.0% |
!! | AGGTGGCATTTTGACAATGG+TGG | + | tig0023416:2032-2051 | None:intergenic | 45.0% |
! | CAACGTCCAACAAGCCTTAT+TGG | - | tig0023416:2132-2151 | Msa1408750:intron | 45.0% |
GTGCTTCCAATAAGGCTTGT+TGG | + | tig0023416:2141-2160 | None:intergenic | 45.0% | |
GAAGAGCAAGATCAAGACGT+GGG | - | tig0023416:2447-2466 | Msa1408750:CDS | 45.0% | |
!!! | TGATTTTTGGTGGGGGAAAG+AGG | + | tig0023416:2570-2589 | None:intergenic | 45.0% |
!! | GAAATAGGTTGGTGGGTTAG+TGG | + | tig0023416:2609-2628 | None:intergenic | 45.0% |
! | AGTGTTGGAACAAGAGGAGA+AGG | - | tig0023416:2940-2959 | Msa1408750:intron | 45.0% |
AAACTTACCTTGCGAGGTGT+TGG | + | tig0023416:3092-3111 | None:intergenic | 45.0% | |
GCATGACGATCATATTGCCA+AGG | + | tig0023416:3355-3374 | None:intergenic | 45.0% | |
ACTTGGACTTTCGCTTCCAA+AGG | - | tig0023416:3486-3505 | Msa1408750:intron | 45.0% | |
GCTTCCAAAGGAACCATTCA+AGG | - | tig0023416:3498-3517 | Msa1408750:intron | 45.0% | |
TCCAATTCCTAAGCCACCTT+GGG | - | tig0023416:3546-3565 | Msa1408750:intron | 45.0% | |
ATAGTAACATCCTCCCAAGG+TGG | + | tig0023416:3562-3581 | None:intergenic | 45.0% | |
GAATGTGCCTAAACACTTGG+TGG | + | tig0023416:1593-1612 | None:intergenic | 45.0% | |
CGGAATTGAACTTGTACCAC+CGG | + | tig0023416:344-363 | None:intergenic | 45.0% | |
TTTGGCGCCACTAGATAACT+CGG | + | tig0023416:364-383 | None:intergenic | 45.0% | |
AGTCAGATTATAGTGCGGTG+CGG | - | tig0023416:576-595 | Msa1408750:intron | 45.0% | |
CTATTAGGCTCAGTTTGGCA+AGG | + | tig0023416:963-982 | None:intergenic | 45.0% | |
GAATGTGCCTAAACACTTGG+TGG | + | tig0023416:1593-1612 | None:intergenic | 45.0% | |
TGGTTCAGGGACAAAAGGAA+AGG | + | tig0023416:1693-1712 | None:intergenic | 45.0% | |
! | CTGATGCCAAATCTGGTTCA+GGG | + | tig0023416:1706-1725 | None:intergenic | 45.0% |
! | TCTGATGCCAAATCTGGTTC+AGG | + | tig0023416:1707-1726 | None:intergenic | 45.0% |
TTCGCTTAAACTCAACTCCG+AGG | + | tig0023416:1743-1762 | None:intergenic | 45.0% | |
! | GTGTTAGCTTCGCGAACAAA+TGG | + | tig0023416:1942-1961 | None:intergenic | 45.0% |
!! | GGTGGCATTTTGACAATGGT+GGG | + | tig0023416:2031-2050 | None:intergenic | 45.0% |
!! | AGGTGGCATTTTGACAATGG+TGG | + | tig0023416:2032-2051 | None:intergenic | 45.0% |
! | CAACGTCCAACAAGCCTTAT+TGG | - | tig0023416:2132-2151 | Msa1408750:intron | 45.0% |
GTGCTTCCAATAAGGCTTGT+TGG | + | tig0023416:2141-2160 | None:intergenic | 45.0% | |
GAAGAGCAAGATCAAGACGT+GGG | - | tig0023416:2447-2466 | Msa1408750:CDS | 45.0% | |
!! | TTTTTGGTGGGGAAAGAGGT+TGG | + | tig0023416:6652-6671 | None:intergenic | 45.0% |
!! | GAAATAGGTTGGTGGGTTAG+TGG | + | tig0023416:2609-2628 | None:intergenic | 45.0% |
! | AGTGTTGGAACAAGAGGAGA+AGG | - | tig0023416:2940-2959 | Msa1408750:intron | 45.0% |
AAACTTACCTTGCGAGGTGT+TGG | + | tig0023416:3092-3111 | None:intergenic | 45.0% | |
GCATGACGATCATATTGCCA+AGG | + | tig0023416:3355-3374 | None:intergenic | 45.0% | |
ACTTGGACTTTCGCTTCCAA+AGG | - | tig0023416:3486-3505 | Msa1408750:intron | 45.0% | |
GCTTCCAAAGGAACCATTCA+AGG | - | tig0023416:3498-3517 | Msa1408750:intron | 45.0% | |
TCCAATTCCTAAGCCACCTT+GGG | - | tig0023416:3546-3565 | Msa1408750:intron | 45.0% | |
ATAGTAACATCCTCCCAAGG+TGG | + | tig0023416:3562-3581 | None:intergenic | 45.0% | |
GAATGTGCCTAAACACTTGG+TGG | + | tig0023416:1593-1612 | None:intergenic | 45.0% | |
! | AAGCACTTGACAGTGGGTTT+GGG | + | tig0023416:8465-8484 | None:intergenic | 45.0% |
! | TAAGCACTTGACAGTGGGTT+TGG | + | tig0023416:8466-8485 | None:intergenic | 45.0% |
TGGTCTAAGCACTTGACAGT+GGG | + | tig0023416:8471-8490 | None:intergenic | 45.0% | |
ATGTTATATGGGCCTGGATC+TGG | - | tig0023416:8693-8712 | Msa1408750:CDS | 45.0% | |
TGTTATATGGGCCTGGATCT+GGG | - | tig0023416:8694-8713 | Msa1408750:CDS | 45.0% | |
ATAAGATTCTCATTCGCGGG+AGG | + | tig0023416:8817-8836 | None:intergenic | 45.0% | |
TCCCGCGAATGAGAATCTTA+TGG | - | tig0023416:8816-8835 | Msa1408750:intron | 45.0% | |
TCGTAATGATTGATGCCTGC+AGG | - | tig0023416:8845-8864 | Msa1408750:intron | 45.0% | |
! | CGGTTATCAGTAATGGAGCA+TGG | + | tig0023416:9252-9271 | None:intergenic | 45.0% |
CTCCCAAAAGCTTAACCTGT+TGG | - | tig0023416:9349-9368 | Msa1408750:intron | 45.0% | |
TACATGAGCCTTAACCCAAC+AGG | + | tig0023416:9367-9386 | None:intergenic | 45.0% | |
TCAACTCGGAAATGAGAGTG+CGG | + | tig0023416:9392-9411 | None:intergenic | 45.0% | |
GGTAATCGAGTATAACAGGC+TGG | + | tig0023416:10350-10369 | None:intergenic | 45.0% | |
ATAGTTGTCTCGCCAGATGT+TGG | - | tig0023416:10402-10421 | Msa1408750:intron | 45.0% | |
!! | GTTTTGAGCCACCGATCTAA+GGG | + | tig0023416:10791-10810 | None:intergenic | 45.0% |
AGCGGATCACTGATAAGACT+TGG | + | tig0023416:11773-11792 | None:intergenic | 45.0% | |
TCTTATAGGGACCATCGCAA+AGG | - | tig0023416:11811-11830 | Msa1408750:intron | 45.0% | |
! | GCAGCTCTTTTGCATCAAGA+AGG | - | tig0023416:11835-11854 | Msa1408750:intron | 45.0% |
AAGTATGTCTGGGTACGAGT+TGG | - | tig0023416:12080-12099 | Msa1408750:intron | 45.0% | |
GACAATCTCTCTATAGCAGG+AGG | + | tig0023416:12292-12311 | None:intergenic | 45.0% | |
TCGATGCCCAAACTGGAATA+AGG | + | tig0023416:12842-12861 | None:intergenic | 45.0% | |
TGTTCAATCGATGCCCAAAC+TGG | + | tig0023416:12849-12868 | None:intergenic | 45.0% | |
TAAGCTGGAACAGCAGAACA+TGG | + | tig0023416:12883-12902 | None:intergenic | 45.0% | |
!! | TTTCAAAAAATAAAATAAAA+TGG | + | tig0023416:1053-1072 | None:intergenic | 5.0% |
!! | TTTCAAAAAATAAAATAAAA+TGG | + | tig0023416:1053-1072 | None:intergenic | 5.0% |
!!! | AACTATAATATATTTTTTAT+TGG | - | tig0023416:8959-8978 | Msa1408750:intron | 5.0% |
!!! | AAAAAATAAATATATTTTTC+TGG | + | tig0023416:9454-9473 | None:intergenic | 5.0% |
AGGGAGAAACGAGGAGTGAT+AGG | + | tig0023416:147-166 | None:intergenic | 50.0% | |
AGAGTTACTTACGACGACGG+CGG | + | tig0023416:181-200 | None:intergenic | 50.0% | |
TATGAAGCATGGACCCTCCT+CGG | + | tig0023416:774-793 | None:intergenic | 50.0% | |
AGGCTCACCACCAAGTGTTT+AGG | - | tig0023416:1583-1602 | Msa1408750:intron | 50.0% | |
ACCAGATTTGGCATCAGAGC+TGG | - | tig0023416:1709-1728 | Msa1408750:intron | 50.0% | |
! | ACCAGCTCTGATGCCAAATC+TGG | + | tig0023416:1713-1732 | None:intergenic | 50.0% |
CAGAGCTGGTTACGATACCT+CGG | - | tig0023416:1723-1742 | Msa1408750:intron | 50.0% | |
!! | GTGCGTGGTTGTTTTGTTGG+TGG | + | tig0023416:1964-1983 | None:intergenic | 50.0% |
TTCACAACGATGCCACCTTC+AGG | - | tig0023416:2222-2241 | Msa1408750:intron | 50.0% | |
GGAAGAGCAAGATCAAGACG+TGG | - | tig0023416:2446-2465 | Msa1408750:CDS | 50.0% | |
AGACGTGGGACAAAATGCGT+CGG | - | tig0023416:2461-2480 | Msa1408750:CDS | 50.0% | |
! | TTTTGGTGGGGGAAAGAGGT+TGG | + | tig0023416:2566-2585 | None:intergenic | 50.0% |
CTTGCCACATTCATCTTGGG+AGG | - | tig0023416:3329-3348 | Msa1408750:CDS | 50.0% | |
AAGGCCTCCCAAGATGAATG+TGG | + | tig0023416:3336-3355 | None:intergenic | 50.0% | |
ACATTCATCTTGGGAGGCCT+TGG | - | tig0023416:3335-3354 | Msa1408750:CDS | 50.0% | |
GTCCAATTCCTAAGCCACCT+TGG | - | tig0023416:3545-3564 | Msa1408750:intron | 50.0% | |
TCCCAAGGTGGCTTAGGAAT+TGG | + | tig0023416:3550-3569 | None:intergenic | 50.0% | |
AATTCCTAAGCCACCTTGGG+AGG | - | tig0023416:3549-3568 | Msa1408750:intron | 50.0% | |
AGGCTCACCACCAAGTGTTT+AGG | - | tig0023416:1583-1602 | Msa1408750:intron | 50.0% | |
TGGCTCAGGGACAAAAGGAA+AGG | + | tig0023416:4086-4105 | None:intergenic | 50.0% | |
!! | TTGGTTTTCTCCTCCAAGGG+TGG | + | tig0023416:4106-4125 | None:intergenic | 50.0% |
AACGCGAAGAGAGAGAGAGA+GGG | + | tig0023416:207-226 | None:intergenic | 50.0% | |
TATGAAGCATGGACCCTCCT+CGG | + | tig0023416:774-793 | None:intergenic | 50.0% | |
AGGCTCACCACCAAGTGTTT+AGG | - | tig0023416:1583-1602 | Msa1408750:intron | 50.0% | |
ACCAGATTTGGCATCAGAGC+TGG | - | tig0023416:1709-1728 | Msa1408750:intron | 50.0% | |
! | ACCAGCTCTGATGCCAAATC+TGG | + | tig0023416:1713-1732 | None:intergenic | 50.0% |
CAGAGCTGGTTACGATACCT+CGG | - | tig0023416:1723-1742 | Msa1408750:intron | 50.0% | |
!! | GTGCGTGGTTGTTTTGTTGG+TGG | + | tig0023416:1964-1983 | None:intergenic | 50.0% |
TTCACAACGATGCCACCTTC+AGG | - | tig0023416:2222-2241 | Msa1408750:intron | 50.0% | |
GGAAGAGCAAGATCAAGACG+TGG | - | tig0023416:2446-2465 | Msa1408750:CDS | 50.0% | |
AGACGTGGGACAAAATGCGT+CGG | - | tig0023416:2461-2480 | Msa1408750:CDS | 50.0% | |
CTTGCCACATTCATCTTGGG+AGG | - | tig0023416:3329-3348 | Msa1408750:CDS | 50.0% | |
AAGGCCTCCCAAGATGAATG+TGG | + | tig0023416:3336-3355 | None:intergenic | 50.0% | |
ACATTCATCTTGGGAGGCCT+TGG | - | tig0023416:3335-3354 | Msa1408750:CDS | 50.0% | |
GTCCAATTCCTAAGCCACCT+TGG | - | tig0023416:3545-3564 | Msa1408750:intron | 50.0% | |
TCCCAAGGTGGCTTAGGAAT+TGG | + | tig0023416:3550-3569 | None:intergenic | 50.0% | |
AATTCCTAAGCCACCTTGGG+AGG | - | tig0023416:3549-3568 | Msa1408750:intron | 50.0% | |
AGGCTCACCACCAAGTGTTT+AGG | - | tig0023416:1583-1602 | Msa1408750:intron | 50.0% | |
TGGCTCAGGGACAAAAGGAA+AGG | + | tig0023416:4086-4105 | None:intergenic | 50.0% | |
!! | TTGGTTTTCTCCTCCAAGGG+TGG | + | tig0023416:4106-4125 | None:intergenic | 50.0% |
CTGGTCTAAGCACTTGACAG+TGG | + | tig0023416:8472-8491 | None:intergenic | 50.0% | |
!! | TCCAACTGCAAGAGAGTGTC+AGG | - | tig0023416:8758-8777 | Msa1408750:CDS | 50.0% |
!! | CCAACTGCAAGAGAGTGTCA+GGG | - | tig0023416:8759-8778 | Msa1408750:CDS | 50.0% |
!! | CAACTGCAAGAGAGTGTCAG+GGG | - | tig0023416:8760-8779 | Msa1408750:CDS | 50.0% |
!! | AACTGCAAGAGAGTGTCAGG+GGG | - | tig0023416:8761-8780 | Msa1408750:CDS | 50.0% |
!! | TTTCTGGCTGAGACAGTCAC+TGG | + | tig0023416:9438-9457 | None:intergenic | 50.0% |
TTGCATGTGACCTCCACTCT+GGG | - | tig0023416:9864-9883 | Msa1408750:intron | 50.0% | |
CGAGTATAACAGGCTGGTAG+TGG | + | tig0023416:10344-10363 | None:intergenic | 50.0% | |
CTAGCTACACCACCAACATC+TGG | + | tig0023416:10417-10436 | None:intergenic | 50.0% | |
TCATGGGCATAATGTTGCCG+AGG | - | tig0023416:10497-10516 | Msa1408750:intron | 50.0% | |
CTCTATGACCCTTAGATCGG+TGG | - | tig0023416:10780-10799 | Msa1408750:intron | 50.0% | |
!! | CGTTTTGAGCCACCGATCTA+AGG | + | tig0023416:10792-10811 | None:intergenic | 50.0% |
GAGATCCTAATCAGGTACGC+TGG | - | tig0023416:11147-11166 | Msa1408750:intron | 50.0% | |
AAAGAGCTGCTCCTTTGCGA+TGG | + | tig0023416:11825-11844 | None:intergenic | 50.0% | |
!! | GCACAACACACGCTGTTTTC+AGG | - | tig0023416:11878-11897 | Msa1408750:intron | 50.0% |
GTCATCGTGAACACGCCATA+TGG | + | tig0023416:12422-12441 | None:intergenic | 50.0% | |
GAACGCGAAGAGAGAGAGAG+AGG | + | tig0023416:208-227 | None:intergenic | 55.0% | |
GATGATACCTGAGCGAGTGC+GGG | + | tig0023416:448-467 | None:intergenic | 55.0% | |
GGATGATACCTGAGCGAGTG+CGG | + | tig0023416:449-468 | None:intergenic | 55.0% | |
!! | GCGGTGCGTGGTTGTTTTGT+TGG | + | tig0023416:1967-1986 | None:intergenic | 55.0% |
!! | CTTGCGAGGTGTTGGAAGTG+TGG | + | tig0023416:3084-3103 | None:intergenic | 55.0% |
CACACTTCCAACACCTCGCA+AGG | - | tig0023416:3082-3101 | Msa1408750:intron | 55.0% | |
GGTGGCTTAGGAATTGGACG+AGG | + | tig0023416:3544-3563 | None:intergenic | 55.0% | |
ACATCCTCCCAAGGTGGCTT+AGG | + | tig0023416:3556-3575 | None:intergenic | 55.0% | |
AGGACGAGTCTCTTCCAACC+CGG | - | tig0023416:3705-3724 | Msa1408750:intron | 55.0% | |
CTCTATCATTCTCCCCGGGT+TGG | + | tig0023416:3722-3741 | None:intergenic | 55.0% | |
AAGGGTGGCTCAGGGACAAA+AGG | + | tig0023416:4091-4110 | None:intergenic | 55.0% | |
! | TTTTGTCCCTGAGCCACCCT+TGG | - | tig0023416:4090-4109 | Msa1408750:intron | 55.0% |
GAACGCGAAGAGAGAGAGAG+AGG | + | tig0023416:208-227 | None:intergenic | 55.0% | |
GATGATACCTGAGCGAGTGC+GGG | + | tig0023416:448-467 | None:intergenic | 55.0% | |
GGATGATACCTGAGCGAGTG+CGG | + | tig0023416:449-468 | None:intergenic | 55.0% | |
!! | GCGGTGCGTGGTTGTTTTGT+TGG | + | tig0023416:1967-1986 | None:intergenic | 55.0% |
!! | CTTGCGAGGTGTTGGAAGTG+TGG | + | tig0023416:3084-3103 | None:intergenic | 55.0% |
CACACTTCCAACACCTCGCA+AGG | - | tig0023416:3082-3101 | Msa1408750:intron | 55.0% | |
GGTGGCTTAGGAATTGGACG+AGG | + | tig0023416:3544-3563 | None:intergenic | 55.0% | |
ACATCCTCCCAAGGTGGCTT+AGG | + | tig0023416:3556-3575 | None:intergenic | 55.0% | |
AGGACGAGTCTCTTCCAACC+CGG | - | tig0023416:3705-3724 | Msa1408750:intron | 55.0% | |
CTCTATCATTCTCCCCGGGT+TGG | + | tig0023416:3722-3741 | None:intergenic | 55.0% | |
AAGGGTGGCTCAGGGACAAA+AGG | + | tig0023416:4091-4110 | None:intergenic | 55.0% | |
! | TTTTGTCCCTGAGCCACCCT+TGG | - | tig0023416:4090-4109 | Msa1408750:intron | 55.0% |
CCCTGACACTCTCTTGCAGT+TGG | + | tig0023416:8762-8781 | None:intergenic | 55.0% | |
TCATTCGCGGGAGGACATGT+AGG | + | tig0023416:8808-8827 | None:intergenic | 55.0% | |
TTTGGCAGAAGCTCTCCTGC+AGG | + | tig0023416:8863-8882 | None:intergenic | 55.0% | |
CTTGCATGTGACCTCCACTC+TGG | - | tig0023416:9863-9882 | Msa1408750:intron | 55.0% | |
CTCCACTCTGGGCAGTCTAT+GGG | - | tig0023416:9875-9894 | Msa1408750:intron | 55.0% | |
GTTGTCTCGCCAGATGTTGG+TGG | - | tig0023416:10405-10424 | Msa1408750:intron | 55.0% | |
CAGGTCCAGCGTACCTGATT+AGG | + | tig0023416:11155-11174 | None:intergenic | 55.0% | |
ATCTCCAGCACAGCCTTGAC+AGG | + | tig0023416:11174-11193 | None:intergenic | 55.0% | |
ACCTTCTGGGCGAGACCATA+TGG | - | tig0023416:12404-12423 | Msa1408750:intron | 55.0% | |
GTTACTTACGACGACGGCGG+CGG | + | tig0023416:178-197 | None:intergenic | 60.0% | |
TACCTGAGCGAGTGCGGGAT+TGG | + | tig0023416:443-462 | None:intergenic | 60.0% | |
TGTCAGTGCCCGTGCTTGTC+AGG | + | tig0023416:675-694 | None:intergenic | 60.0% | |
ACACCGACACGTCTAAGCCG+AGG | - | tig0023416:754-773 | Msa1408750:CDS | 60.0% | |
CCTCCTCGGCTTAGACGTGT+CGG | + | tig0023416:760-779 | None:intergenic | 60.0% | |
CGACACGTCTAAGCCGAGGA+GGG | - | tig0023416:758-777 | Msa1408750:CDS | 60.0% | |
GTGAAGATTGTGGCGGTGCG+TGG | + | tig0023416:1979-1998 | None:intergenic | 60.0% | |
GGACGAGTCTCTTCCAACCC+GGG | - | tig0023416:3706-3725 | Msa1408750:intron | 60.0% | |
GACGAGTCTCTTCCAACCCG+GGG | - | tig0023416:3707-3726 | Msa1408750:intron | 60.0% | |
TCTCCTCCAAGGGTGGCTCA+GGG | + | tig0023416:4099-4118 | None:intergenic | 60.0% | |
TTCTCCTCCAAGGGTGGCTC+AGG | + | tig0023416:4100-4119 | None:intergenic | 60.0% | |
TACCTGAGCGAGTGCGGGAT+TGG | + | tig0023416:443-462 | None:intergenic | 60.0% | |
TGTCAGTGCCCGTGCTTGTC+AGG | + | tig0023416:675-694 | None:intergenic | 60.0% | |
ACACCGACACGTCTAAGCCG+AGG | - | tig0023416:754-773 | Msa1408750:CDS | 60.0% | |
CCTCCTCGGCTTAGACGTGT+CGG | + | tig0023416:760-779 | None:intergenic | 60.0% | |
CGACACGTCTAAGCCGAGGA+GGG | - | tig0023416:758-777 | Msa1408750:CDS | 60.0% | |
GTGAAGATTGTGGCGGTGCG+TGG | + | tig0023416:1979-1998 | None:intergenic | 60.0% | |
GGACGAGTCTCTTCCAACCC+GGG | - | tig0023416:3706-3725 | Msa1408750:intron | 60.0% | |
GACGAGTCTCTTCCAACCCG+GGG | - | tig0023416:3707-3726 | Msa1408750:intron | 60.0% | |
TCTCCTCCAAGGGTGGCTCA+GGG | + | tig0023416:4099-4118 | None:intergenic | 60.0% | |
TTCTCCTCCAAGGGTGGCTC+AGG | + | tig0023416:4100-4119 | None:intergenic | 60.0% | |
CCATAGACTGCCCAGAGTGG+AGG | + | tig0023416:9877-9896 | None:intergenic | 60.0% | |
CCTCCACTCTGGGCAGTCTA+TGG | - | tig0023416:9874-9893 | Msa1408750:intron | 60.0% | |
AGCCCATAGACTGCCCAGAG+TGG | + | tig0023416:9880-9899 | None:intergenic | 60.0% | |
CAGGTACGCTGGACCTGTCA+AGG | - | tig0023416:11158-11177 | Msa1408750:intron | 60.0% | |
TGGACCTGTCAAGGCTGTGC+TGG | - | tig0023416:11167-11186 | Msa1408750:intron | 60.0% | |
GCCATATGGTCTCGCCCAGA+AGG | + | tig0023416:12408-12427 | None:intergenic | 60.0% | |
GCGTTGCGGAGGGAGAAACG+AGG | + | tig0023416:156-175 | None:intergenic | 65.0% | |
CTGAGCGAGTGCGGGATTGG+CGG | + | tig0023416:440-459 | None:intergenic | 65.0% | |
CCGACACGTCTAAGCCGAGG+AGG | - | tig0023416:757-776 | Msa1408750:CDS | 65.0% | |
TGTCCCTGAGCCACCCTTGG+AGG | - | tig0023416:4093-4112 | Msa1408750:intron | 65.0% | |
CTGAGCGAGTGCGGGATTGG+CGG | + | tig0023416:440-459 | None:intergenic | 65.0% | |
CCGACACGTCTAAGCCGAGG+AGG | - | tig0023416:757-776 | Msa1408750:CDS | 65.0% | |
TGTCCCTGAGCCACCCTTGG+AGG | - | tig0023416:4093-4112 | Msa1408750:intron | 65.0% | |
CGCCAATCCCGCACTCGCTC+AGG | - | tig0023416:438-457 | Msa1408750:intron | 70.0% | |
CGCCAATCCCGCACTCGCTC+AGG | - | tig0023416:438-457 | Msa1408750:intron | 70.0% | |
! | GACGGCGGCGGCGTTGCGGA+GGG | + | tig0023416:166-185 | None:intergenic | 80.0% |
! | CGACGACGGCGGCGGCGTTG+CGG | + | tig0023416:170-189 | None:intergenic | 80.0% |
! | CGACGGCGGCGGCGTTGCGG+AGG | + | tig0023416:167-186 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0023416 | gene | 1 | 13152 | 1 | ID=Msa1408750;Name=Msa1408750 |
tig0023416 | mRNA | 1 | 13152 | 1 | ID=Msa1408750-mRNA-1;Parent=Msa1408750;Name=Msa1408750-mRNA-1;_AED=0.19;_eAED=0.19;_QI=92|0.88|0.9|1|1|1|10|287|464 |
tig0023416 | exon | 1 | 326 | 1 | ID=Msa1408750-mRNA-1:exon:25748;Parent=Msa1408750-mRNA-1 |
tig0023416 | exon | 706 | 865 | 706 | ID=Msa1408750-mRNA-1:exon:25747;Parent=Msa1408750-mRNA-1 |
tig0023416 | exon | 1254 | 1334 | 1254 | ID=Msa1408750-mRNA-1:exon:25746;Parent=Msa1408750-mRNA-1 |
tig0023416 | exon | 2418 | 2491 | 2418 | ID=Msa1408750-mRNA-1:exon:25745;Parent=Msa1408750-mRNA-1 |
tig0023416 | exon | 2635 | 2802 | 2635 | ID=Msa1408750-mRNA-1:exon:25744;Parent=Msa1408750-mRNA-1 |
tig0023416 | exon | 3219 | 3362 | 3219 | ID=Msa1408750-mRNA-1:exon:25743;Parent=Msa1408750-mRNA-1 |
tig0023416 | exon | 4220 | 4468 | 4220 | ID=Msa1408750-mRNA-1:exon:25742;Parent=Msa1408750-mRNA-1 |
tig0023416 | exon | 8610 | 8801 | 8610 | ID=Msa1408750-mRNA-1:exon:25741;Parent=Msa1408750-mRNA-1 |
tig0023416 | exon | 12694 | 12885 | 12694 | ID=Msa1408750-mRNA-1:exon:25740;Parent=Msa1408750-mRNA-1 |
tig0023416 | exon | 12965 | 13152 | 12965 | ID=Msa1408750-mRNA-1:exon:25739;Parent=Msa1408750-mRNA-1 |
tig0023416 | five_prime_UTR | 13061 | 13152 | 13061 | ID=Msa1408750-mRNA-1:five_prime_utr;Parent=Msa1408750-mRNA-1 |
tig0023416 | CDS | 12965 | 13060 | 12965 | ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1 |
tig0023416 | CDS | 12694 | 12885 | 12694 | ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1 |
tig0023416 | CDS | 8610 | 8801 | 8610 | ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1 |
tig0023416 | CDS | 4220 | 4468 | 4220 | ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1 |
tig0023416 | CDS | 3219 | 3362 | 3219 | ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1 |
tig0023416 | CDS | 2635 | 2802 | 2635 | ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1 |
tig0023416 | CDS | 2418 | 2491 | 2418 | ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1 |
tig0023416 | CDS | 1254 | 1334 | 1254 | ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1 |
tig0023416 | CDS | 706 | 865 | 706 | ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1 |
tig0023416 | CDS | 288 | 326 | 288 | ID=Msa1408750-mRNA-1:cds;Parent=Msa1408750-mRNA-1 |
tig0023416 | three_prime_UTR | 1 | 287 | 1 | ID=Msa1408750-mRNA-1:three_prime_utr;Parent=Msa1408750-mRNA-1 |
Gene Sequence |
Protein sequence |