AlfalfaGEDB | Msa0170430

M. sativa cultivar zhongmu-4 / Msa0170430

KEGG: -
GO: -
PFAM: PF10153.12

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0170430	XP_013468747.2	85.876	354	11	4	1	318	1	351	2.40e-169	485

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0170430	A0A396JQ58	85.876	354	11	4	1	318	1	351	1.15e-169	485

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0008200	Msa0170430	0.823961	1.044932e-53	-8.615850e-47
Msa0010490	Msa0170430	0.840205	1.000137e-57	-8.615850e-47
Msa0010500	Msa0170430	0.832773	7.807991e-56	-8.615850e-47
Msa0020390	Msa0170430	0.812955	3.266978e-51	-8.615850e-47
Msa0023480	Msa0170430	0.810282	1.245581e-50	-8.615850e-47
Msa0029260	Msa0170430	0.805816	1.112183e-49	-8.615850e-47
Msa0030300	Msa0170430	0.870387	1.516800e-66	-8.615850e-47
Msa0032470	Msa0170430	0.804205	2.415777e-49	-8.615850e-47
Msa0033880	Msa0170430	0.809410	1.918378e-50	-8.615850e-47
Msa0036540	Msa0170430	0.840019	1.118836e-57	-8.615850e-47
Msa0043980	Msa0170430	0.809534	1.804839e-50	-8.615850e-47
Msa0059950	Msa0170430	0.837337	5.516367e-57	-8.615850e-47
Msa0068020	Msa0170430	0.809277	2.049137e-50	-8.615850e-47
Msa0071250	Msa0170430	0.809416	1.912418e-50	-8.615850e-47
Msa0072420	Msa0170430	0.807283	5.452091e-50	-8.615850e-47
Msa0077900	Msa0170430	0.854060	1.582154e-61	-8.615850e-47
Msa0086420	Msa0170430	0.803272	3.773986e-49	-8.615850e-47
Msa0087800	Msa0170430	0.814405	1.566591e-51	-8.615850e-47
Msa0090520	Msa0170430	0.803405	3.541608e-49	-8.615850e-47
Msa0090550	Msa0170430	0.816962	4.219623e-52	-8.615850e-47
Msa0104230	Msa0170430	0.811668	6.238610e-51	-8.615850e-47
Msa0111080	Msa0170430	0.804444	2.154216e-49	-8.615850e-47
Msa0126360	Msa0170430	0.812795	3.542207e-51	-8.615850e-47
Msa0126880	Msa0170430	0.802358	5.825802e-49	-8.615850e-47
Msa0127850	Msa0170430	0.807939	3.955838e-50	-8.615850e-47
Msa0137990	Msa0170430	0.803571	3.271427e-49	-8.615850e-47
Msa0138020	Msa0170430	0.829964	3.832414e-55	-8.615850e-47
Msa0144430	Msa0170430	0.804016	2.644603e-49	-8.615850e-47
Msa0148080	Msa0170430	0.848432	6.152923e-60	-8.615850e-47
Msa0149440	Msa0170430	0.809688	1.671692e-50	-8.615850e-47
Msa0154920	Msa0170430	0.821713	3.488854e-53	-8.615850e-47
Msa0160960	Msa0170430	0.802413	5.676218e-49	-8.615850e-47
Msa0167980	Msa0170430	0.801216	9.996773e-49	-8.615850e-47
Msa0169300	Msa0170430	0.805729	1.159928e-49	-8.615850e-47
Msa0170430	Msa0187490	0.831104	2.016370e-55	-8.615850e-47
Msa0170430	Msa0189300	0.804811	1.805801e-49	-8.615850e-47
Msa0170430	Msa0190590	0.814419	1.555581e-51	-8.615850e-47
Msa0170430	Msa0191070	0.822934	1.815816e-53	-8.615850e-47
Msa0170430	Msa0202410	0.816531	5.270747e-52	-8.615850e-47
Msa0170430	Msa0204960	0.806268	8.934086e-50	-8.615850e-47
Msa0170430	Msa0205010	0.802788	4.751085e-49	-8.615850e-47
Msa0170430	Msa0233370	0.820716	5.920473e-53	-8.615850e-47
Msa0170430	Msa0241140	0.823503	1.337115e-53	-8.615850e-47
Msa0170430	Msa0244980	0.835078	2.068745e-56	-8.615850e-47
Msa0170430	Msa0245430	0.820381	7.067596e-53	-8.615850e-47
Msa0170430	Msa0257490	0.813788	2.143614e-51	-8.615850e-47
Msa0170430	Msa0269470	0.801920	7.169883e-49	-8.615850e-47
Msa0170430	Msa0278580	0.804890	1.738267e-49	-8.615850e-47
Msa0170430	Msa0281530	0.807847	4.138017e-50	-8.615850e-47
Msa0170430	Msa0284180	0.806505	7.964061e-50	-8.615850e-47
Msa0170430	Msa0285330	0.811308	7.470399e-51	-8.615850e-47
Msa0170430	Msa0296790	0.812444	4.226329e-51	-8.615850e-47
Msa0170430	Msa0296920	0.811977	5.344615e-51	-8.615850e-47
Msa0170430	Msa0311720	0.806597	7.616121e-50	-8.615850e-47
Msa0170430	Msa0317960	0.800768	1.234119e-48	-8.615850e-47
Msa0170430	Msa0317970	0.815522	8.853701e-52	-8.615850e-47
Msa0170430	Msa0321690	0.817430	3.310641e-52	-8.615850e-47
Msa0170430	Msa0322240	0.851188	1.044514e-60	-8.615850e-47
Msa0170430	Msa0324240	0.804682	1.921137e-49	-8.615850e-47
Msa0170430	Msa0339910	0.805405	1.356257e-49	-8.615850e-47
Msa0170430	Msa0347750	0.800166	1.637363e-48	-8.615850e-47
Msa0170430	Msa0377450	0.801795	7.606238e-49	-8.615850e-47
Msa0170430	Msa0378970	0.832835	7.535639e-56	-8.615850e-47
Msa0170430	Msa0380100	0.848102	7.590606e-60	-8.615850e-47
Msa0170430	Msa0382310	0.808500	3.004774e-50	-8.615850e-47
Msa0170430	Msa0385490	0.816104	6.567089e-52	-8.615850e-47
Msa0170430	Msa0385500	0.837365	5.426325e-57	-8.615850e-47
Msa0170430	Msa0388700	0.807751	4.336748e-50	-8.615850e-47
Msa0170430	Msa0427580	0.836155	1.104548e-56	-8.615850e-47
Msa0170430	Msa0432500	0.807604	4.660565e-50	-8.615850e-47
Msa0170430	Msa0466250	0.820337	7.234029e-53	-8.615850e-47
Msa0170430	Msa0467780	0.802736	4.869145e-49	-8.615850e-47
Msa0170430	Msa0474940	0.818049	2.400942e-52	-8.615850e-47
Msa0170430	Msa0480780	0.800870	1.176682e-48	-8.615850e-47
Msa0170430	Msa0481030	0.865440	5.898274e-65	-8.615850e-47
Msa0170430	Msa0481280	0.809042	2.300202e-50	-8.615850e-47
Msa0170430	Msa0482940	0.813779	2.153220e-51	-8.615850e-47
Msa0170430	Msa0489410	0.801565	8.479610e-49	-8.615850e-47
Msa0170430	Msa0500470	0.865962	4.034298e-65	-8.615850e-47
Msa0170430	Msa0502090	0.810772	9.763281e-51	-8.615850e-47
Msa0170430	Msa0510930	0.835055	2.095834e-56	-8.615850e-47
Msa0170430	Msa0514180	0.815634	8.359207e-52	-8.615850e-47
Msa0170430	Msa0517640	0.809108	2.227365e-50	-8.615850e-47
Msa0170430	Msa0518170	0.843874	1.071292e-58	-8.615850e-47
Msa0170430	Msa0518440	0.803856	2.854986e-49	-8.615850e-47
Msa0170430	Msa0527540	0.809235	2.091614e-50	-8.615850e-47
Msa0170430	Msa0532980	0.816010	6.893945e-52	-8.615850e-47
Msa0170430	Msa0539410	0.806972	6.343213e-50	-8.615850e-47
Msa0170430	Msa0542560	0.816949	4.247191e-52	-8.615850e-47
Msa0170430	Msa0544840	0.833284	5.824459e-56	-8.615850e-47
Msa0170430	Msa0546570	0.800829	1.199191e-48	-8.615850e-47
Msa0170430	Msa0547160	0.811007	8.681819e-51	-8.615850e-47
Msa0170430	Msa0581280	0.845769	3.302126e-59	-8.615850e-47
Msa0170430	Msa0600080	0.818422	1.976819e-52	-8.615850e-47
Msa0170430	Msa0607690	0.804355	2.248255e-49	-8.615850e-47
Msa0170430	Msa0610130	0.809851	1.542506e-50	-8.615850e-47
Msa0170430	Msa0610180	0.822822	1.928981e-53	-8.615850e-47
Msa0170430	Msa0610250	0.830718	2.508502e-55	-8.615850e-47
Msa0170430	Msa0618950	0.826277	2.963493e-54	-8.615850e-47
Msa0170430	Msa0618970	0.822102	2.835127e-53	-8.615850e-47
Msa0170430	Msa0624060	0.812103	5.017228e-51	-8.615850e-47
Msa0170430	Msa0634890	0.817388	3.384967e-52	-8.615850e-47
Msa0170430	Msa0642970	0.811623	6.381863e-51	-8.615850e-47
Msa0170430	Msa0665100	0.813823	2.106009e-51	-8.615850e-47
Msa0170430	Msa0667770	0.811638	6.333755e-51	-8.615850e-47
Msa0170430	Msa0667790	0.825283	5.100330e-54	-8.615850e-47
Msa0170430	Msa0672550	0.808503	2.999199e-50	-8.615850e-47
Msa0170430	Msa0676130	0.802506	5.432423e-49	-8.615850e-47
Msa0170430	Msa0689440	0.812492	4.125766e-51	-8.615850e-47
Msa0170430	Msa0701100	0.805030	1.625010e-49	-8.615850e-47
Msa0170430	Msa0703440	0.812352	4.426360e-51	-8.615850e-47
Msa0170430	Msa0703910	0.816078	6.655564e-52	-8.615850e-47
Msa0170430	Msa0705390	0.809219	2.108586e-50	-8.615850e-47
Msa0170430	Msa0705990	0.804953	1.686371e-49	-8.615850e-47
Msa0170430	Msa0719180	0.834969	2.203445e-56	-8.615850e-47
Msa0170430	Msa0741440	0.858890	6.035642e-63	-8.615850e-47
Msa0170430	Msa0746170	0.812542	4.022463e-51	-8.615850e-47
Msa0170430	Msa0746210	0.813862	2.064310e-51	-8.615850e-47
Msa0170430	Msa0786750	0.828952	6.753279e-55	-8.615850e-47
Msa0170430	Msa0794970	0.802021	6.836070e-49	-8.615850e-47
Msa0170430	Msa0800370	0.837225	5.892356e-57	-8.615850e-47
Msa0170430	Msa0822500	0.836735	7.860026e-57	-8.615850e-47
Msa0170430	Msa0827280	0.839347	1.672682e-57	-8.615850e-47
Msa0170430	Msa0829220	0.819480	1.136353e-52	-8.615850e-47
Msa0170430	Msa0830540	0.816371	5.723727e-52	-8.615850e-47
Msa0170430	Msa0831100	0.808595	2.866658e-50	-8.615850e-47
Msa0170430	Msa0838370	0.810410	1.168710e-50	-8.615850e-47
Msa0170430	Msa0844280	0.804267	2.345354e-49	-8.615850e-47
Msa0170430	Msa0865030	0.827356	1.636749e-54	-8.615850e-47
Msa0170430	Msa0877710	0.805818	1.110829e-49	-8.615850e-47
Msa0170430	Msa0880730	0.804011	2.650989e-49	-8.615850e-47
Msa0170430	Msa0894710	0.807370	5.225439e-50	-8.615850e-47
Msa0170430	Msa0944200	0.808264	3.373229e-50	-8.615850e-47
Msa0170430	Msa0945240	0.804658	1.943122e-49	-8.615850e-47
Msa0170430	Msa0970530	0.803665	3.128608e-49	-8.615850e-47
Msa0170430	Msa0970600	0.804633	1.967024e-49	-8.615850e-47
Msa0170430	Msa0974950	0.808623	2.827861e-50	-8.615850e-47
Msa0170430	Msa0980020	0.815194	1.047668e-51	-8.615850e-47
Msa0170430	Msa0980540	0.813652	2.296656e-51	-8.615850e-47
Msa0170430	Msa0985180	0.800526	1.382947e-48	-8.615850e-47
Msa0170430	Msa0992580	0.817215	3.701536e-52	-8.615850e-47
Msa0170430	Msa0992600	0.808777	2.621945e-50	-8.615850e-47
Msa0170430	Msa1034590	0.805327	1.408335e-49	-8.615850e-47
Msa0170430	Msa1042660	0.804103	2.536800e-49	-8.615850e-47
Msa0170430	Msa1059470	0.819642	1.043375e-52	-8.615850e-47
Msa0170430	Msa1063420	0.805806	1.117609e-49	-8.615850e-47
Msa0170430	Msa1080490	0.802719	4.909528e-49	-8.615850e-47
Msa0170430	Msa1081790	-0.803808	2.921090e-49	-8.615850e-47
Msa0170430	Msa1089320	0.862188	6.049329e-64	-8.615850e-47
Msa0170430	Msa1089450	0.808608	2.848958e-50	-8.615850e-47
Msa0170430	Msa1089460	0.807459	5.003868e-50	-8.615850e-47
Msa0170430	Msa1091940	0.802606	5.181144e-49	-8.615850e-47
Msa0170430	Msa1133230	0.820662	6.092576e-53	-8.615850e-47
Msa0170430	Msa1133250	0.802168	6.375336e-49	-8.615850e-47
Msa0170430	Msa1137780	0.814064	1.863547e-51	-8.615850e-47
Msa0170430	Msa1144040	0.800945	1.135596e-48	-8.615850e-47
Msa0170430	Msa1160590	0.816760	4.683272e-52	-8.615850e-47
Msa0170430	Msa1165270	0.807403	5.142785e-50	-8.615850e-47
Msa0170430	Msa1165780	0.806658	7.391041e-50	-8.615850e-47
Msa0170430	Msa1175200	0.844975	5.418965e-59	-8.615850e-47
Msa0170430	Msa1176720	0.821723	3.469073e-53	-8.615850e-47
Msa0170430	Msa1178060	0.805375	1.376187e-49	-8.615850e-47
Msa0170430	Msa1206310	0.807747	4.345031e-50	-8.615850e-47
Msa0170430	Msa1206360	0.807651	4.554118e-50	-8.615850e-47
Msa0170430	Msa1206650	0.829073	6.312794e-55	-8.615850e-47
Msa0170430	Msa1207310	0.827923	1.196422e-54	-8.615850e-47
Msa0170430	Msa1208380	0.823472	1.359978e-53	-8.615850e-47
Msa0170430	Msa1209200	0.834558	2.796786e-56	-8.615850e-47
Msa0170430	Msa1218500	0.810432	1.156338e-50	-8.615850e-47
Msa0170430	Msa1229480	0.805284	1.438121e-49	-8.615850e-47
Msa0170430	Msa1233850	0.803882	2.819091e-49	-8.615850e-47
Msa0170430	Msa1277410	0.825263	5.156612e-54	-8.615850e-47
Msa0170430	Msa1278900	0.814702	1.346419e-51	-8.615850e-47
Msa0170430	Msa1298100	0.807696	4.455666e-50	-8.615850e-47
Msa0170430	Msa1307160	0.818988	1.470169e-52	-8.615850e-47
Msa0170430	Msa1307180	0.885989	5.050992e-72	-8.615850e-47
Msa0170430	Msa1315750	0.830694	2.542591e-55	-8.615850e-47
Msa0170430	Msa1316360	0.880954	3.586528e-70	-8.615850e-47
Msa0170430	Msa1331350	0.817540	3.127716e-52	-8.615850e-47
Msa0170430	Msa1336560	0.833580	4.914021e-56	-8.615850e-47
Msa0170430	Msa1337480	0.802886	4.534238e-49	-8.615850e-47
Msa0170430	Msa1341060	0.841058	5.981962e-58	-8.615850e-47
Msa0170430	Msa1345940	0.827119	1.865164e-54	-8.615850e-47
Msa0170430	Msa1346840	0.842151	3.080552e-58	-8.615850e-47
Msa0170430	Msa1351540	0.810342	1.209110e-50	-8.615850e-47
Msa0170430	Msa1357190	0.804393	2.207598e-49	-8.615850e-47
Msa0170430	Msa1359560	0.801585	8.399865e-49	-8.615850e-47
Msa0170430	Msa1364210	0.860642	1.791089e-63	-8.615850e-47
Msa0170430	Msa1369890	0.805173	1.516647e-49	-8.615850e-47
Msa0170430	Msa1370590	0.818716	1.695007e-52	-8.615850e-47
Msa0170430	Msa1378410	0.806157	9.427384e-50	-8.615850e-47
Msa0170430	Msa1382020	0.807694	4.460524e-50	-8.615850e-47
Msa0170430	Msa1384100	0.816317	5.885651e-52	-8.615850e-47
Msa0170430	Msa1389850	0.813901	2.023721e-51	-8.615850e-47
Msa0170430	Msa1389880	0.813427	2.574315e-51	-8.615850e-47
Msa0170430	Msa1395730	0.839096	1.944194e-57	-8.615850e-47
Msa0170430	Msa1407190	0.858173	9.880810e-63	-8.615850e-47
Msa0170430	Msa1412130	0.830278	3.213625e-55	-8.615850e-47
Msa0170430	Msa1419870	0.817933	2.550457e-52	-8.615850e-47
Msa0170430	Msa1425260	0.816322	5.870088e-52	-8.615850e-47
Msa0170430	Msa1428780	0.826120	3.229970e-54	-8.615850e-47
Msa0170430	Msa1432130	0.849824	2.523812e-60	-8.615850e-47
Msa0170430	Msa1436520	0.828398	9.193506e-55	-8.615850e-47
Msa0170430	Msa1437270	0.805289	1.434239e-49	-8.615850e-47
Msa0170430	Msa1438840	0.802219	6.224967e-49	-8.615850e-47
Msa0170430	Msa1444120	0.809947	1.471018e-50	-8.615850e-47
Msa0170430	Msa1447890	0.812484	4.141485e-51	-8.615850e-47
Msa0170430	Msa1458810	0.805341	1.398954e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0170430	MtrunA17_Chr1g0187991	85.876	354	11	4	1	318	1	351	2.21e-173	485

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0170430	AT1G04230.1	53.378	296	82	6	1	248	1	288	8.26e-75	233
Msa0170430	AT1G04230.2	53.378	296	81	7	1	248	1	287	6.45e-73	229
Msa0170430	AT5G43720.1	54.730	296	83	7	1	250	1	291	2.08e-69	220

Find 109 sgRNAs with CRISPR-Local

Find 331 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTAAATTCCAATTTGTTTA+TGG	0.071395	1_4:-54428210	Msa0170430:three_prime_UTR
ATCTCTGTTTAGATGAATTT+TGG	0.177579	1_4:+54429681	None:intergenic
CATTATTGTATTACCAGATA+TGG	0.287713	1_4:-54428152	Msa0170430:three_prime_UTR
CAGTGAGGATGACGGTCTTC+TGG	0.295263	1_4:-54430144	Msa0170430:CDS
AACGGGTGGTTTGAATTTCT+TGG	0.296653	1_4:+54432862	None:intergenic
GAGCAGGCTTCTAGTGCTTC+TGG	0.304491	1_4:-54429936	Msa0170430:CDS
TGCGTTCGGCGGATCGGATT+TGG	0.330713	1_4:+54432828	None:intergenic
GTTGTCGTCCATAAACAAAT+TGG	0.341603	1_4:+54428202	None:intergenic
AGAAGCACAGGTGCAGAAAC+TGG	0.342086	1_4:-54432701	Msa0170430:CDS
TGTAAGATTGATTCATTTGA+AGG	0.344448	1_4:-54427991	Msa0170430:three_prime_UTR
CGTTCAAAACCTTCTTCAAT+AGG	0.346677	1_4:+54428101	None:intergenic
CAAACAAGTTGTCAAGGTTT+GGG	0.346944	1_4:-54429712	Msa0170430:CDS
TCAAACAAGTTGTCAAGGTT+TGG	0.348252	1_4:-54429713	Msa0170430:CDS
GAGCTGGTCCCTGCTCTTGA+AGG	0.354743	1_4:+54429551	None:intergenic
GTAAGGGAACCCTCAAGATC+AGG	0.387740	1_4:-54429602	Msa0170430:CDS
CATATATGTACTGACTTGTT+AGG	0.388670	1_4:-54428310	Msa0170430:three_prime_UTR
AGGAAATTACACACCATATC+TGG	0.393462	1_4:+54428139	None:intergenic
GTAAGGGAACCCTCAAGATC+AGG	0.395899	1_4:-54429518	Msa0170430:CDS
TTATCTGTGGCTGCTGCAAC+TGG	0.397239	1_4:-54431111	Msa0170430:CDS
AACCTTGACAACTTGTTTGA+AGG	0.398124	1_4:+54429716	None:intergenic
TGAGCATTGCTATGGCCATT+TGG	0.410826	1_4:-54428442	Msa0170430:three_prime_UTR
TTCTCCACCTGCAGGAATGA+TGG	0.414705	1_4:-54428471	Msa0170430:intron
GAGATAGTTGACAAGCGAAA+TGG	0.426687	1_4:-54431159	Msa0170430:CDS
TTGTCAAGGTTTGGGTCTGC+AGG	0.427670	1_4:-54429704	Msa0170430:CDS
TACCTTTCGGAGCATGCGTT+CGG	0.429821	1_4:+54432814	None:intergenic
ATGTTCTGTGGTGGACCTGC+AGG	0.431299	1_4:-54428362	Msa0170430:three_prime_UTR
AGCGCCATGGCTCACGGCGG+CGG	0.433460	1_4:-54432929	Msa0170430:exon
TTGTATTGGTTGCAGAGAGC+AGG	0.434704	1_4:-54429952	Msa0170430:intron
GCTTCATCACTAGAACTTCC+AGG	0.434881	1_4:+54430095	None:intergenic
GGGGTCTTCATATCTGACCC+TGG	0.446822	1_4:-54428243	Msa0170430:three_prime_UTR
GAGCTGGTCCCTGATCTTGA+GGG	0.447815	1_4:+54429593	None:intergenic
TGGGAGACAAATCATTGAAC+TGG	0.455247	1_4:-54428069	Msa0170430:three_prime_UTR
AAGAACTTGCCTATTGAAGA+AGG	0.456869	1_4:-54428110	Msa0170430:three_prime_UTR
CTGATCATGAATTTAGTTCA+CGG	0.459991	1_4:+54428041	None:intergenic
ACCTTGACAACTTGTTTGAA+GGG	0.465270	1_4:+54429717	None:intergenic
GCAACTGGCAAGGATTTAGA+AGG	0.471858	1_4:-54431096	Msa0170430:intron
ATGACTGGTCCCTGATCTTG+AGG	0.475131	1_4:+54429508	None:intergenic
GTAAGGGAACCTTCAAGAGC+AGG	0.475623	1_4:-54429560	Msa0170430:CDS
GCAGCTCAGACTTCAGAGTA+AGG	0.479250	1_4:-54429619	Msa0170430:CDS
AGATAGTTGACAAGCGAAAT+GGG	0.480235	1_4:-54431158	Msa0170430:CDS
TGAGCTGGTCCCTGATCTTG+AGG	0.482216	1_4:+54429592	None:intergenic
AGAAGATTAAGTTCTTTGAG+AGG	0.482582	1_4:-54432609	Msa0170430:CDS
TTGTTTGAAGGGCGAGGAGG+AGG	0.487851	1_4:+54429728	None:intergenic
TTTGCTGTTTGATGCGTAGC+GGG	0.489522	1_4:+54429643	None:intergenic
TGACTGGTCCCTGATCTTGA+GGG	0.490656	1_4:+54429509	None:intergenic
AGGAGGAGGCATCAAAGCTC+TGG	0.493369	1_4:+54429742	None:intergenic
TGGTTTGAATTTCTTGGCGG+TGG	0.495559	1_4:+54432868	None:intergenic
CCTTACTCTGAAGTCTGAGC+TGG	0.495940	1_4:+54429577	None:intergenic
GACACCGCCGCCGTGAGCCA+TGG	0.496302	1_4:+54432925	None:intergenic
CCAGCTCAGACTTTAGAGTA+AGG	0.498575	1_4:-54429535	Msa0170430:CDS
CCAGCTCAGACTTCAGAGTA+AGG	0.500871	1_4:-54429577	Msa0170430:CDS
GCTTCTGGAAAAGCTGTGTC+TGG	0.504121	1_4:-54429921	Msa0170430:CDS
AGCGGAGGTTAGAGAAGCAC+AGG	0.504954	1_4:-54432713	Msa0170430:CDS
ACAATCAGAAAACCTAATCA+AGG	0.527811	1_4:-54432973	Msa0170430:five_prime_UTR
TGACTTGTTAGGATAGATTG+AGG	0.528078	1_4:-54428299	Msa0170430:three_prime_UTR
CACAAGCCTCGGACAGGTCA+TGG	0.529184	1_4:-54429455	Msa0170430:CDS
CAGTAAAAGAAGCTCCCTGC+AGG	0.530166	1_4:+54428347	None:intergenic
GATGCTCACAAGCCTCGGAC+AGG	0.531903	1_4:-54429461	Msa0170430:CDS
GGGTGGTTTGAATTTCTTGG+CGG	0.533885	1_4:+54432865	None:intergenic
GGAGCATGCGTTCGGCGGAT+CGG	0.538352	1_4:+54432822	None:intergenic
ACTCTGATGCTCACAAGCCT+CGG	0.541640	1_4:-54429415	Msa0170430:CDS
GGGTCTTCATATCTGACCCT+GGG	0.541800	1_4:-54428242	Msa0170430:three_prime_UTR
CTATTGCTTTCTTCATCTCG+AGG	0.546011	1_4:+54432996	None:intergenic
ACTCTGATGCTCACAAGCCT+CGG	0.546671	1_4:-54429466	Msa0170430:CDS
GAAATAGAATATCCCTCCGT+CGG	0.547155	1_4:-54433022	Msa0170430:five_prime_UTR
ATCTCGAGGAACCCGACGGA+GGG	0.548194	1_4:+54433010	None:intergenic
GCCCTTCAAACAAGTTGTCA+AGG	0.549834	1_4:-54429718	Msa0170430:CDS
CCTTACTCTAAAGTCTGAGC+TGG	0.551248	1_4:+54429535	None:intergenic
CTTCATCTCGAGGAACCCGA+CGG	0.555144	1_4:+54433006	None:intergenic
GAAAACAGCGCCATGGCTCA+CGG	0.561570	1_4:-54432935	Msa0170430:exon
GACAACTTGTTTGAAGGGCG+AGG	0.563882	1_4:+54429722	None:intergenic
AAATAGAATATCCCTCCGTC+GGG	0.568977	1_4:-54433021	Msa0170430:five_prime_UTR
TGTGCTTCTCTAACCTCCGC+TGG	0.571924	1_4:+54432715	None:intergenic
CGCCGAACGCATGCTCCGAA+AGG	0.581830	1_4:-54432816	Msa0170430:intron
CTTTCGGAGCATGCGTTCGG+CGG	0.585097	1_4:+54432817	None:intergenic
AGGCTTGTGAGCATCAGAGT+TGG	0.585984	1_4:+54429418	None:intergenic
AGGCTTGTGAGCATCAGAGT+TGG	0.585984	1_4:+54429469	None:intergenic
TCAAGATCAGGGACCAGTCA+TGG	0.587180	1_4:-54429506	Msa0170430:CDS
TAAGGGAACCCTCAAGATCA+GGG	0.588906	1_4:-54429517	Msa0170430:CDS
TAAGGGAACCCTCAAGATCA+GGG	0.588906	1_4:-54429601	Msa0170430:CDS
TGTGAAGAAGCTGATCCAAA+TGG	0.588926	1_4:+54428427	None:intergenic
TGTGGCTGCTGCAACTGGCA+AGG	0.589859	1_4:-54431106	Msa0170430:CDS
CAGCTCAGACTTCAGAGTAA+GGG	0.598053	1_4:-54429618	Msa0170430:CDS
TAAGGGAACCTTCAAGAGCA+GGG	0.607477	1_4:-54429559	Msa0170430:CDS
GCTTAGACTACTACCATGAC+TGG	0.607754	1_4:+54429493	None:intergenic
ATTTAGTGGAACTGATGATG+CGG	0.619368	1_4:-54431181	Msa0170430:intron
GGATAAACTGAGCATTGCTA+TGG	0.619853	1_4:-54428450	Msa0170430:three_prime_UTR
ACTGGACGGGACATGTTCTG+TGG	0.622245	1_4:-54428374	Msa0170430:three_prime_UTR
CAGCTCAGACTTTAGAGTAA+GGG	0.622748	1_4:-54429534	Msa0170430:CDS
TTCTACGGTTTGCGGCGGGG+CGG	0.624791	1_4:+54432894	None:intergenic
TATTCACACTCGCCTCGCTG+TGG	0.635745	1_4:-54432656	Msa0170430:CDS
AACTTGTTTGAAGGGCGAGG+AGG	0.639014	1_4:+54429725	None:intergenic
ATTGCAGAATTTACCAGCGG+AGG	0.639111	1_4:-54432728	Msa0170430:intron
CAGCTCAGACTTCAGAGTAA+GGG	0.639698	1_4:-54429576	Msa0170430:CDS
GGAAGCACTGAAGAAACAGC+AGG	0.640824	1_4:-54432680	Msa0170430:CDS
GGACGGGACATGTTCTGTGG+TGG	0.643991	1_4:-54428371	Msa0170430:three_prime_UTR
TTAGGTCTTCTCTTTCTCCG+AGG	0.650734	1_4:+54429398	None:intergenic
TGTTCTGTGGTGGACCTGCA+GGG	0.651190	1_4:-54428361	Msa0170430:three_prime_UTR
TACTACCGAAAACAGCGCCA+TGG	0.654784	1_4:-54432942	Msa0170430:exon
AATTGACAGACAAAAGTACC+AGG	0.657399	1_4:-54430058	Msa0170430:intron
GATTGAAGAGAGGTTATCTG+TGG	0.668869	1_4:-54431124	Msa0170430:CDS
GAGACTGGCAGTGAGGATGA+CGG	0.672293	1_4:-54430152	Msa0170430:CDS
CATCTCGAGGAACCCGACGG+AGG	0.680902	1_4:+54433009	None:intergenic
AACAGCGCCATGGCTCACGG+CGG	0.693190	1_4:-54432932	Msa0170430:exon
CTACTGCCATGACCTGTCCG+AGG	0.693261	1_4:+54429449	None:intergenic
ATATCTTACGTTCCACAGCG+AGG	0.697849	1_4:+54432644	None:intergenic
TGAATTGCAGAATTTACCAG+CGG	0.705694	1_4:-54432731	Msa0170430:intron
TGCGCAAACAGATTGAAGAG+AGG	0.706610	1_4:-54431134	Msa0170430:CDS
TGTTACAGAGACTGGCAGTG+AGG	0.712205	1_4:-54430159	Msa0170430:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGTGAATTTATTTATAAAT+AGG	+	chr1_4:54431913-54431932	None:intergenic	10.0%
!!	ACTTAAATATTAAATAAAAC+AGG	-	chr1_4:54432342-54432361	Msa0170430:intron	10.0%
!!	TCTGTAAAATAAAAACATTA+CGG	-	chr1_4:54427986-54428005	Msa0170430:three_prime_UTR	15.0%
!!	AGCAAGTATAAATAAATATA+AGG	+	chr1_4:54429131-54429150	None:intergenic	15.0%
!!!	TTTTGTCTTTTAAGTTTTTA+AGG	-	chr1_4:54429372-54429391	Msa0170430:intron	15.0%
!!!	TTTGTATTGATTTTAGAATT+AGG	-	chr1_4:54430107-54430126	Msa0170430:CDS	15.0%
!!!	TTGTATTGATTTTAGAATTA+GGG	-	chr1_4:54430108-54430127	Msa0170430:CDS	15.0%
!!	AATAAACTGAAAATAGTTTA+TGG	+	chr1_4:54430229-54430248	None:intergenic	15.0%
!!	TAAAGAAAGATGAAAAATTA+GGG	+	chr1_4:54430469-54430488	None:intergenic	15.0%
!!!	TCAAAATTAAAAGCTTTTAA+TGG	+	chr1_4:54431818-54431837	None:intergenic	15.0%
!!!	ATTAAATTCCAATTTGTTTA+TGG	-	chr1_4:54432824-54432843	Msa0170430:CDS	15.0%
!!	ATAAGTTTGAAAACATCTTA+AGG	+	chr1_4:54428710-54428729	None:intergenic	20.0%
!!!	TTTATTTCTATAAGCTCTTA+AGG	-	chr1_4:54428971-54428990	Msa0170430:intron	20.0%
!!!	ATAAATATAAGGCTTTGTTT+TGG	+	chr1_4:54429120-54429139	None:intergenic	20.0%
!!!	AAGACATATTTTTCATTCTT+GGG	+	chr1_4:54429215-54429234	None:intergenic	20.0%
!!!	AAAGACATATTTTTCATTCT+TGG	+	chr1_4:54429216-54429235	None:intergenic	20.0%
!!!	GTTTTTGACAAATTATATCT+AGG	-	chr1_4:54429526-54429545	Msa0170430:CDS	20.0%
!!	AACTTATAACTTATATGATG+AGG	-	chr1_4:54429694-54429713	Msa0170430:CDS	20.0%
!!	ACTTATAACTTATATGATGA+GGG	-	chr1_4:54429695-54429714	Msa0170430:CDS	20.0%
!!!	AAATATGTTCCTTTATTTAG+TGG	-	chr1_4:54429839-54429858	Msa0170430:intron	20.0%
!!!	ATTAAGTTGTTTATGTAAAC+AGG	-	chr1_4:54430392-54430411	Msa0170430:intron	20.0%
!!!	TTAAGTTGTTTATGTAAACA+GGG	-	chr1_4:54430393-54430412	Msa0170430:intron	20.0%
!!	GTAAAGAAAGATGAAAAATT+AGG	+	chr1_4:54430470-54430489	None:intergenic	20.0%
!!!	TTCTTCGTAAAATTATTTTG+TGG	-	chr1_4:54430492-54430511	Msa0170430:intron	20.0%
!!!	TTTATCACTTTCTTTTATCT+TGG	-	chr1_4:54430632-54430651	Msa0170430:intron	20.0%
!!!	AGTTATCTCAATAAGTTTTT+TGG	-	chr1_4:54431026-54431045	Msa0170430:intron	20.0%
!!!	AGTGGATAAATTTTTTGTAT+TGG	-	chr1_4:54431068-54431087	Msa0170430:intron	20.0%
!!	TAAACTAAAAGATATGAGAA+AGG	+	chr1_4:54431961-54431980	None:intergenic	20.0%
!!!	TTTCAATTTTGCATTTAAAG+TGG	-	chr1_4:54431987-54432006	Msa0170430:intron	20.0%
!!	CACATTCAAATAGTTATTAT+AGG	+	chr1_4:54432073-54432092	None:intergenic	20.0%
!!	CTATAATAACTATTTGAATG+TGG	-	chr1_4:54432071-54432090	Msa0170430:intron	20.0%
!!	ACAACAATAAATTGGAAATA+AGG	+	chr1_4:54432231-54432250	None:intergenic	20.0%
!!	ATAAATGTGCATTACAATTA+GGG	+	chr1_4:54432544-54432563	None:intergenic	20.0%
!!	AATAAATGTGCATTACAATT+AGG	+	chr1_4:54432545-54432564	None:intergenic	20.0%
!!!	ATTTAATTTTAAGTAACCCA+GGG	+	chr1_4:54432811-54432830	None:intergenic	20.0%
!!!	AATTTAATTTTAAGTAACCC+AGG	+	chr1_4:54432812-54432831	None:intergenic	20.0%
!	GAGAATAAATAACCGAATTA+GGG	+	chr1_4:54428276-54428295	None:intergenic	25.0%
!	AGAGAATAAATAACCGAATT+AGG	+	chr1_4:54428277-54428296	None:intergenic	25.0%
!	ACAAGATCTTCAATATGTTA+TGG	-	chr1_4:54428552-54428571	Msa0170430:intron	25.0%
!	AAATTATACCTATGCTTGTT+TGG	-	chr1_4:54428603-54428622	Msa0170430:intron	25.0%
!	ATTAAGCTGTATATCTGAAT+AGG	-	chr1_4:54428826-54428845	Msa0170430:intron	25.0%
!	TTAAGCTGTATATCTGAATA+GGG	-	chr1_4:54428827-54428846	Msa0170430:intron	25.0%
!!	GAGTTTATGGAAACATTTTA+TGG	-	chr1_4:54428923-54428942	Msa0170430:intron	25.0%
!	TCTTATAGCCTATATGAAAA+TGG	-	chr1_4:54429010-54429029	Msa0170430:intron	25.0%
!!	AAAGCAAACCATTTTCATAT+AGG	+	chr1_4:54429021-54429040	None:intergenic	25.0%
!!	AAATATGTCTTTCAGTGTTT+TGG	-	chr1_4:54429224-54429243	Msa0170430:intron	25.0%
!!	AATATGTCTTTCAGTGTTTT+GGG	-	chr1_4:54429225-54429244	Msa0170430:intron	25.0%
!	GGTGACAAAAAATATGTTTA+GGG	-	chr1_4:54429246-54429265	Msa0170430:intron	25.0%
!	AAATTATATCTAGGTCTGTT+TGG	-	chr1_4:54429535-54429554	Msa0170430:CDS	25.0%
!	ATTAGTTGAAAACAGCTTAT+GGG	+	chr1_4:54429641-54429660	None:intergenic	25.0%
!	AATTAGTTGAAAACAGCTTA+TGG	+	chr1_4:54429642-54429661	None:intergenic	25.0%
!	ATTAAGCTGTTTATCTAAAC+AGG	-	chr1_4:54429728-54429747	Msa0170430:CDS	25.0%
!	TTAAGCTGTTTATCTAAACA+GGG	-	chr1_4:54429729-54429748	Msa0170430:CDS	25.0%
!!	TTGTTGTTGATGTATTATGT+TGG	-	chr1_4:54430004-54430023	Msa0170430:intron	25.0%
!!!	TTTTAGAATTAGGGTTTGTT+TGG	-	chr1_4:54430117-54430136	Msa0170430:CDS	25.0%
!!!	TAAAATAAAGCTGTTTTCGT+AGG	+	chr1_4:54430275-54430294	None:intergenic	25.0%
!	ATCATTAGTGTAAATGCTAT+AGG	-	chr1_4:54430333-54430352	Msa0170430:intron	25.0%
!!	CTATGTGACTTTACAATTTT+TGG	-	chr1_4:54430546-54430565	Msa0170430:intron	25.0%
!	TAAACACAGAATATTAAGGA+AGG	+	chr1_4:54430616-54430635	None:intergenic	25.0%
!	GTGATAAACACAGAATATTA+AGG	+	chr1_4:54430620-54430639	None:intergenic	25.0%
!	AATAGAAACATTATATGCAG+GGG	+	chr1_4:54430693-54430712	None:intergenic	25.0%
!	CAATAGAAACATTATATGCA+GGG	+	chr1_4:54430694-54430713	None:intergenic	25.0%
!!	TTGTTGACATTTTATCAAAC+AGG	+	chr1_4:54430842-54430861	None:intergenic	25.0%
!	ATTATATCGATGAAAAGTAG+TGG	-	chr1_4:54431050-54431069	Msa0170430:intron	25.0%
!	ATAATGTGTGACTATCTATT+CGG	+	chr1_4:54431223-54431242	None:intergenic	25.0%
!!	ATCTCTGTTTAGATGAATTT+TGG	+	chr1_4:54431356-54431375	None:intergenic	25.0%
!	TAATTACCATTCATTCTAAC+TGG	-	chr1_4:54431726-54431745	Msa0170430:intron	25.0%
!!!	AAAGTTGAGACTTTTTTAAG+TGG	-	chr1_4:54431776-54431795	Msa0170430:intron	25.0%
!	TCACTTATGATTGTATGATA+AGG	-	chr1_4:54431842-54431861	Msa0170430:intron	25.0%
!	AAAAGATATGAGAAAGGTAA+GGG	+	chr1_4:54431955-54431974	None:intergenic	25.0%
!	TAAAAGATATGAGAAAGGTA+AGG	+	chr1_4:54431956-54431975	None:intergenic	25.0%
!	TTATTATAGGCATTTACACA+TGG	+	chr1_4:54432060-54432079	None:intergenic	25.0%
!!	TTTCCAATTTATTGTTGTTG+TGG	-	chr1_4:54432233-54432252	Msa0170430:intron	25.0%
!!!	TCTTACAATTACGTTTTAAC+TGG	-	chr1_4:54432642-54432661	Msa0170430:CDS	25.0%
!!!	AGATTAATAGCTTTTGACTA+TGG	-	chr1_4:54432770-54432789	Msa0170430:intron	25.0%
!!!	GATTAATAGCTTTTGACTAT+GGG	-	chr1_4:54432771-54432790	Msa0170430:intron	25.0%
!!!	ATTAATAGCTTTTGACTATG+GGG	-	chr1_4:54432772-54432791	Msa0170430:intron	25.0%
!	CATTATTGTATTACCAGATA+TGG	-	chr1_4:54432882-54432901	Msa0170430:CDS	25.0%
!!	TGTAAGATTGATTCATTTGA+AGG	-	chr1_4:54433043-54433062	Msa0170430:five_prime_UTR	25.0%
	ACAATCAGAAAACCTAATCA+AGG	-	chr1_4:54428061-54428080	Msa0170430:three_prime_UTR	30.0%
!	AGTATTTTGCTTCCTTGATT+AGG	+	chr1_4:54428076-54428095	None:intergenic	30.0%
!!!	ATTTGGTTTTTGAGAGAAAC+GGG	+	chr1_4:54428192-54428211	None:intergenic	30.0%
!!!	GATTTGGTTTTTGAGAGAAA+CGG	+	chr1_4:54428193-54428212	None:intergenic	30.0%
	AGAAGATTAAGTTCTTTGAG+AGG	-	chr1_4:54428425-54428444	Msa0170430:three_prime_UTR	30.0%
	TTGAGAGGAGAAAAATTGAA+CGG	-	chr1_4:54428440-54428459	Msa0170430:three_prime_UTR	30.0%
	GCTTATTCGAGCTTATTTAT+TGG	-	chr1_4:54428630-54428649	Msa0170430:intron	30.0%
!!	CTTATTTTCATAAGCTCTCT+AGG	-	chr1_4:54428725-54428744	Msa0170430:intron	30.0%
	TAAGCTGTATATCTGAATAG+GGG	-	chr1_4:54428828-54428847	Msa0170430:intron	30.0%
	AAACTGAAAAACACAGCTTA+TGG	+	chr1_4:54428954-54428973	None:intergenic	30.0%
!	ACTTGCTGCTGTAAATAAAT+AGG	-	chr1_4:54429144-54429163	Msa0170430:intron	30.0%
	GGGTGACAAAAAATATGTTT+AGG	-	chr1_4:54429245-54429264	Msa0170430:intron	30.0%
!	AAAATATGTTTAGGGTCTGT+CGG	-	chr1_4:54429254-54429273	Msa0170430:intron	30.0%
!	AGGATAGCTTATAGCTTTTA+TGG	-	chr1_4:54429392-54429411	Msa0170430:CDS	30.0%
	TAAGCTGTTTATCTAAACAG+GGG	-	chr1_4:54429730-54429749	Msa0170430:CDS	30.0%
	GGAACATATTTCTCATTCTT+GGG	+	chr1_4:54429830-54429849	None:intergenic	30.0%
	AGGAACATATTTCTCATTCT+TGG	+	chr1_4:54429831-54429850	None:intergenic	30.0%
	TCATCAGTTCCACTAAATAA+AGG	+	chr1_4:54429851-54429870	None:intergenic	30.0%
!!	TTTATTTTCATAAGCTCTCC+AGG	-	chr1_4:54430243-54430262	Msa0170430:intron	30.0%
	ATGAAAAATTAGGGTTGCAT+TGG	+	chr1_4:54430460-54430479	None:intergenic	30.0%
!	ATCAATTGATTGAAAGTGCA+GGG	+	chr1_4:54430584-54430603	None:intergenic	30.0%
!	CACTTTCTTTTATCTTGGTT+TGG	-	chr1_4:54430637-54430656	Msa0170430:intron	30.0%
	GCAATAGAAACATTATATGC+AGG	+	chr1_4:54430695-54430714	None:intergenic	30.0%
	AAACCAAGCACTTGAAATAA+GGG	+	chr1_4:54430724-54430743	None:intergenic	30.0%
	AAAACCAAGCACTTGAAATA+AGG	+	chr1_4:54430725-54430744	None:intergenic	30.0%
!	TGACATTTTATCAAACAGGA+AGG	+	chr1_4:54430838-54430857	None:intergenic	30.0%
!!!	GATGATGATTTTTTTCTTCC+TGG	-	chr1_4:54430921-54430940	Msa0170430:intron	30.0%
!!!	AGCAAAGATGTTTTAGTACT+TGG	-	chr1_4:54431001-54431020	Msa0170430:intron	30.0%
!!!	GCAAAGATGTTTTAGTACTT+GGG	-	chr1_4:54431002-54431021	Msa0170430:intron	30.0%
	ATTGCTAGTTGTTACTCTTA+CGG	+	chr1_4:54431169-54431188	None:intergenic	30.0%
	AAATCTGCCTCTACAAAAAT+GGG	+	chr1_4:54431269-54431288	None:intergenic	30.0%
	AAGTTTCCAGTTAGAATGAA+TGG	+	chr1_4:54431735-54431754	None:intergenic	30.0%
	TAAGGATTTACTCTTATCAC+TGG	-	chr1_4:54431860-54431879	Msa0170430:intron	30.0%
	AATAGGAATGCATTTCAAGA+CGG	+	chr1_4:54431896-54431915	None:intergenic	30.0%
!!	CAATTTTGCATTTAAAGTGG+TGG	-	chr1_4:54431990-54432009	Msa0170430:intron	30.0%
	AATCATGAGAATATGATGAC+AGG	-	chr1_4:54432157-54432176	Msa0170430:intron	30.0%
	TTGCCACAACAACAATAAAT+TGG	+	chr1_4:54432239-54432258	None:intergenic	30.0%
	GATAGTTACTGTGTTCAATT+TGG	+	chr1_4:54432288-54432307	None:intergenic	30.0%
	TATTATGTATCAAACAGCGT+GGG	-	chr1_4:54432378-54432397	Msa0170430:intron	30.0%
	AAAAGTAACTCTACAACAGA+TGG	+	chr1_4:54432436-54432455	None:intergenic	30.0%
!!!	ACAATTACGTTTTAACTGGA+CGG	-	chr1_4:54432646-54432665	Msa0170430:CDS	30.0%
!!	CATATATGTACTGACTTGTT+AGG	-	chr1_4:54432724-54432743	Msa0170430:CDS	30.0%
!	ATAGGCAAGTTCTTTTGTAA+AGG	+	chr1_4:54432918-54432937	None:intergenic	30.0%
!	CTGATCATGAATTTAGTTCA+CGG	+	chr1_4:54432996-54433015	None:intergenic	30.0%
!	ATTAAGGGGGTTTTACCTTT+CGG	+	chr1_4:54428236-54428255	None:intergenic	35.0%
	TGAATTGCAGAATTTACCAG+CGG	-	chr1_4:54428303-54428322	Msa0170430:three_prime_UTR	35.0%
	ATACCTATGCTTGTTTGGAT+TGG	-	chr1_4:54428608-54428627	Msa0170430:intron	35.0%
	AGACAGTTTGATTGAGCTTA+TGG	-	chr1_4:54428667-54428686	Msa0170430:intron	35.0%
!!	TTTCATAAGCTCTCTAGGAT+AGG	-	chr1_4:54428730-54428749	Msa0170430:intron	35.0%
	TCCACTAAATAAGTCCAAAC+AGG	+	chr1_4:54428863-54428882	None:intergenic	35.0%
	CACACAAGTACTTATGTTAG+TGG	+	chr1_4:54428892-54428911	None:intergenic	35.0%
	TAAGTACTTGTGTGACAGTT+TGG	-	chr1_4:54428898-54428917	Msa0170430:intron	35.0%
	AAGTACTTGTGTGACAGTTT+GGG	-	chr1_4:54428899-54428918	Msa0170430:intron	35.0%
!	AAATATGTTTAGGGTCTGTC+GGG	-	chr1_4:54429255-54429274	Msa0170430:intron	35.0%
!!	AAAAGCGCTTGGAAAATGTT+TGG	-	chr1_4:54429306-54429325	Msa0170430:intron	35.0%
!	AAAGCGCTTGGAAAATGTTT+GGG	-	chr1_4:54429307-54429326	Msa0170430:intron	35.0%
!	ATTTAGTGGAACTGATGATG+CGG	-	chr1_4:54429853-54429872	Msa0170430:intron	35.0%
	AGATAGTTGACAAGCGAAAT+GGG	-	chr1_4:54429876-54429895	Msa0170430:intron	35.0%
	TAACTCAAGTGGTTGATCTA+GGG	+	chr1_4:54430045-54430064	None:intergenic	35.0%
	TATCCAAAGTGTAACTCAAG+TGG	+	chr1_4:54430056-54430075	None:intergenic	35.0%
	TACTAACATAAGCACTTGTG+AGG	-	chr1_4:54430161-54430180	Msa0170430:intron	35.0%
	ACTAACATAAGCACTTGTGA+GGG	-	chr1_4:54430162-54430181	Msa0170430:intron	35.0%
	GTTTATGGACATACCATAAG+AGG	+	chr1_4:54430214-54430233	None:intergenic	35.0%
!	GATCAATTGATTGAAAGTGC+AGG	+	chr1_4:54430585-54430604	None:intergenic	35.0%
!	TTACCCTTATTTCAAGTGCT+TGG	-	chr1_4:54430718-54430737	Msa0170430:intron	35.0%
!!!	TTCAAGTGCTTGGTTTTAGT+TGG	-	chr1_4:54430728-54430747	Msa0170430:intron	35.0%
!	TCTGTTTGAAATTGGTGACT+GGG	-	chr1_4:54430763-54430782	Msa0170430:intron	35.0%
!	CATTTTATCAAACAGGAAGG+AGG	+	chr1_4:54430835-54430854	None:intergenic	35.0%
!!	AATTGACAGACAAAAGTACC+AGG	-	chr1_4:54430976-54430995	Msa0170430:intron	35.0%
!!!	AACCTGATTTTTTTCATCGC+TGG	+	chr1_4:54431144-54431163	None:intergenic	35.0%
!!	ATCTTAGCCCATTTTTGTAG+AGG	-	chr1_4:54431259-54431278	Msa0170430:intron	35.0%
	GAAATCTGCCTCTACAAAAA+TGG	+	chr1_4:54431270-54431289	None:intergenic	35.0%
!	ACCTTGACAACTTGTTTGAA+GGG	+	chr1_4:54431320-54431339	None:intergenic	35.0%
!	AACCTTGACAACTTGTTTGA+AGG	+	chr1_4:54431321-54431340	None:intergenic	35.0%
	TCAAACAAGTTGTCAAGGTT+TGG	-	chr1_4:54431321-54431340	Msa0170430:intron	35.0%
	CAAACAAGTTGTCAAGGTTT+GGG	-	chr1_4:54431322-54431341	Msa0170430:intron	35.0%
	ACCTAAGAAGAAAAAGAAGC+AGG	-	chr1_4:54431653-54431672	Msa0170430:intron	35.0%
!	ACCTGCTTCTTTTTCTTCTT+AGG	+	chr1_4:54431657-54431676	None:intergenic	35.0%
!	CACTTATGTCTTTTGTGTTC+AGG	-	chr1_4:54431928-54431947	Msa0170430:intron	35.0%
	TACTGTCTTCCTTGAAAGAA+AGG	-	chr1_4:54432118-54432137	Msa0170430:intron	35.0%
	ACTGTCTTCCTTGAAAGAAA+GGG	-	chr1_4:54432119-54432138	Msa0170430:intron	35.0%
	TTCATATCCCCTTTCTTTCA+AGG	+	chr1_4:54432130-54432149	None:intergenic	35.0%
!!	ATAAGGTGTCAAGTGTGTTT+TGG	+	chr1_4:54432214-54432233	None:intergenic	35.0%
	GTATTATGTATCAAACAGCG+TGG	-	chr1_4:54432377-54432396	Msa0170430:intron	35.0%
!!!	CAATTACGTTTTAACTGGAC+GGG	-	chr1_4:54432647-54432666	Msa0170430:CDS	35.0%
!!	TGACTTGTTAGGATAGATTG+AGG	-	chr1_4:54432735-54432754	Msa0170430:intron	35.0%
	GTTGTCGTCCATAAACAAAT+TGG	+	chr1_4:54432835-54432854	None:intergenic	35.0%
	AGGAAATTACACACCATATC+TGG	+	chr1_4:54432898-54432917	None:intergenic	35.0%
	AAGAACTTGCCTATTGAAGA+AGG	-	chr1_4:54432924-54432943	Msa0170430:CDS	35.0%
	CGTTCAAAACCTTCTTCAAT+AGG	+	chr1_4:54432936-54432955	None:intergenic	35.0%
	GAAATAGAATATCCCTCCGT+CGG	-	chr1_4:54428012-54428031	Msa0170430:three_prime_UTR	40.0%
	AAATAGAATATCCCTCCGTC+GGG	-	chr1_4:54428013-54428032	Msa0170430:three_prime_UTR	40.0%
	CTATTGCTTTCTTCATCTCG+AGG	+	chr1_4:54428041-54428060	None:intergenic	40.0%
	AACGGGTGGTTTGAATTTCT+TGG	+	chr1_4:54428175-54428194	None:intergenic	40.0%
	AGTGTAAGGGTTGGGATTAA+GGG	+	chr1_4:54428251-54428270	None:intergenic	40.0%
	TAGTGTAAGGGTTGGGATTA+AGG	+	chr1_4:54428252-54428271	None:intergenic	40.0%
!	TTAGGGTTAGTGTAAGGGTT+GGG	+	chr1_4:54428259-54428278	None:intergenic	40.0%
!	ATTAGGGTTAGTGTAAGGGT+TGG	+	chr1_4:54428260-54428279	None:intergenic	40.0%
!	CCGAATTAGGGTTAGTGTAA+GGG	+	chr1_4:54428264-54428283	None:intergenic	40.0%
	CCCTTACACTAACCCTAATT+CGG	-	chr1_4:54428261-54428280	Msa0170430:three_prime_UTR	40.0%
!	ACCGAATTAGGGTTAGTGTA+AGG	+	chr1_4:54428265-54428284	None:intergenic	40.0%
	AAGCCAATCCAAACAAGCAT+AGG	+	chr1_4:54428614-54428633	None:intergenic	40.0%
	GTTTGATTGAGCTTATGGAC+CGG	-	chr1_4:54428672-54428691	Msa0170430:intron	40.0%
	CTTAAGGTCATGTCATTAGC+CGG	+	chr1_4:54428694-54428713	None:intergenic	40.0%
	GCCTGTTTGGACTTATTTAG+TGG	-	chr1_4:54428859-54428878	Msa0170430:intron	40.0%
	TGACAGTTTGGGAGAGTTTA+TGG	-	chr1_4:54428910-54428929	Msa0170430:intron	40.0%
!	CATTTTCCAAGCGCTTTTGT+CGG	+	chr1_4:54429304-54429323	None:intergenic	40.0%
	AAAATGTTTGGGAGAGCTAG+TGG	-	chr1_4:54429318-54429337	Msa0170430:intron	40.0%
!	CTAATTTTCGCAAGCTGTCT+AGG	-	chr1_4:54429656-54429675	Msa0170430:CDS	40.0%
	GAGATAGTTGACAAGCGAAA+TGG	-	chr1_4:54429875-54429894	Msa0170430:intron	40.0%
	GATTGAAGAGAGGTTATCTG+TGG	-	chr1_4:54429910-54429929	Msa0170430:CDS	40.0%
	GTAACTCAAGTGGTTGATCT+AGG	+	chr1_4:54430046-54430065	None:intergenic	40.0%
	CAACCACTTGAGTTACACTT+TGG	-	chr1_4:54430050-54430069	Msa0170430:intron	40.0%
	TTGTGAGGGAGACTACTTTA+GGG	-	chr1_4:54430176-54430195	Msa0170430:intron	40.0%
!	AGACTACTTTAGGGAGCTTA+AGG	-	chr1_4:54430185-54430204	Msa0170430:intron	40.0%
	GAGCTTAAGGAAACCTCTTA+TGG	-	chr1_4:54430198-54430217	Msa0170430:intron	40.0%
!	TGTTTTCGTAGGAACTATCC+TGG	+	chr1_4:54430264-54430283	None:intergenic	40.0%
	AGAAACATTATATGCAGGGG+CGG	+	chr1_4:54430690-54430709	None:intergenic	40.0%
!	AGCTGAGCTCTGTTTGAAAT+TGG	-	chr1_4:54430755-54430774	Msa0170430:intron	40.0%
!	CTCTGTTTGAAATTGGTGAC+TGG	-	chr1_4:54430762-54430781	Msa0170430:intron	40.0%
!	GGAAGGAGGCATAAATACAA+AGG	+	chr1_4:54430821-54430840	None:intergenic	40.0%
	CTAAAACATCTTTGCTCACC+TGG	+	chr1_4:54430997-54431016	None:intergenic	40.0%
	GTCCAGCGATGAAAAAAATC+AGG	-	chr1_4:54431139-54431158	Msa0170430:CDS	40.0%
!!!	TTTTGCTGTTTGATGCGTAG+CGG	+	chr1_4:54431395-54431414	None:intergenic	40.0%
!!	CAGCTCAGACTTTAGAGTAA+GGG	-	chr1_4:54431500-54431519	Msa0170430:intron	40.0%
	CTGTCTTCCTTGAAAGAAAG+GGG	-	chr1_4:54432120-54432139	Msa0170430:intron	40.0%
	AGTTAGCTCAAGCTTTACTG+TGG	-	chr1_4:54432316-54432335	Msa0170430:intron	40.0%
	GCATTACAATTAGGGACATC+AGG	+	chr1_4:54432536-54432555	None:intergenic	40.0%
	AGTTTATCCATCATTCCTGC+AGG	+	chr1_4:54432573-54432592	None:intergenic	40.0%
!	GGATAAACTGAGCATTGCTA+TGG	-	chr1_4:54432584-54432603	Msa0170430:CDS	40.0%
	TGTGAAGAAGCTGATCCAAA+TGG	+	chr1_4:54432610-54432629	None:intergenic	40.0%
!!	GTTTTGAACGAGCTGCATAT+GGG	-	chr1_4:54432946-54432965	Msa0170430:five_prime_UTR	40.0%
	TGGGAGACAAATCATTGAAC+TGG	-	chr1_4:54432965-54432984	Msa0170430:five_prime_UTR	40.0%
!	GGTGGTTTTTCTACGGTTTG+CGG	+	chr1_4:54428151-54428170	None:intergenic	45.0%
!	TCTTGGCGGTGGTTTTTCTA+CGG	+	chr1_4:54428158-54428177	None:intergenic	45.0%
	TGGTTTGAATTTCTTGGCGG+TGG	+	chr1_4:54428169-54428188	None:intergenic	45.0%
	GGGTGGTTTGAATTTCTTGG+CGG	+	chr1_4:54428172-54428191	None:intergenic	45.0%
!!	TGGTTTTTGAGAGAAACGGG+TGG	+	chr1_4:54428189-54428208	None:intergenic	45.0%
	TGTAAGGGTTGGGATTAAGG+GGG	+	chr1_4:54428249-54428268	None:intergenic	45.0%
	GTGTAAGGGTTGGGATTAAG+GGG	+	chr1_4:54428250-54428269	None:intergenic	45.0%
	ATTGCAGAATTTACCAGCGG+AGG	-	chr1_4:54428306-54428325	Msa0170430:three_prime_UTR	45.0%
	ATATCTTACGTTCCACAGCG+AGG	+	chr1_4:54428393-54428412	None:intergenic	45.0%
	AGCTTCTTCGTCGTCTTCTT+CGG	-	chr1_4:54428492-54428511	Msa0170430:intron	45.0%
	TTAAGCGAAGCAAGCTGATC+AGG	+	chr1_4:54428532-54428551	None:intergenic	45.0%
	AGGGGTTTATACTGCCTGTT+TGG	-	chr1_4:54428846-54428865	Msa0170430:intron	45.0%
!!	TATCTACCGACAAAAGCGCT+TGG	-	chr1_4:54429295-54429314	Msa0170430:intron	45.0%
	TCAGCACTTGTGAGACAGTT+TGG	-	chr1_4:54429587-54429606	Msa0170430:CDS	45.0%
	TGCGCAAACAGATTGAAGAG+AGG	-	chr1_4:54429900-54429919	Msa0170430:CDS	45.0%
	GCAACTGGCAAGGATTTAGA+AGG	-	chr1_4:54429938-54429957	Msa0170430:CDS	45.0%
	ACTGGCAAGGATTTAGAAGG+TGG	-	chr1_4:54429941-54429960	Msa0170430:intron	45.0%
	CTTGTGAGGGAGACTACTTT+AGG	-	chr1_4:54430175-54430194	Msa0170430:intron	45.0%
	TAAACAGGGCCATAGAACCA+GGG	-	chr1_4:54430407-54430426	Msa0170430:intron	45.0%
	GGCGGATGGAAAAATTATCC+AGG	+	chr1_4:54430672-54430691	None:intergenic	45.0%
!	TGTGCTACTGTTACAGAGAC+TGG	-	chr1_4:54430867-54430886	Msa0170430:intron	45.0%
	GCTTCATCACTAGAACTTCC+AGG	+	chr1_4:54430942-54430961	None:intergenic	45.0%
!!	TTGTATTGGTTGCAGAGAGC+AGG	-	chr1_4:54431082-54431101	Msa0170430:intron	45.0%
	GCCCTTCAAACAAGTTGTCA+AGG	-	chr1_4:54431316-54431335	Msa0170430:intron	45.0%
!!	TTTGCTGTTTGATGCGTAGC+GGG	+	chr1_4:54431394-54431413	None:intergenic	45.0%
	CAGCTCAGACTTCAGAGTAA+GGG	-	chr1_4:54431416-54431435	Msa0170430:intron	45.0%
	TAAGGGAACCCTCAAGATCA+GGG	-	chr1_4:54431433-54431452	Msa0170430:intron	45.0%
	CAGCTCAGACTTCAGAGTAA+GGG	-	chr1_4:54431416-54431435	Msa0170430:intron	45.0%
	TAAGGGAACCTTCAAGAGCA+GGG	-	chr1_4:54431475-54431494	Msa0170430:intron	45.0%
!!	CCTTACTCTAAAGTCTGAGC+TGG	+	chr1_4:54431502-54431521	None:intergenic	45.0%
!!	CCAGCTCAGACTTTAGAGTA+AGG	-	chr1_4:54431499-54431518	Msa0170430:intron	45.0%
	TAAGGGAACCCTCAAGATCA+GGG	-	chr1_4:54431433-54431452	Msa0170430:intron	45.0%
	GCTTAGACTACTACCATGAC+TGG	+	chr1_4:54431544-54431563	None:intergenic	45.0%
	TTAGGTCTTCTCTTTCTCCG+AGG	+	chr1_4:54431639-54431658	None:intergenic	45.0%
	GTTGTTGTGGCAACTACGTT+TGG	-	chr1_4:54432246-54432265	Msa0170430:intron	45.0%
	CACATTTATTCTCCACCTGC+AGG	-	chr1_4:54432555-54432574	Msa0170430:CDS	45.0%
	TTATCCATCATTCCTGCAGG+TGG	+	chr1_4:54432570-54432589	None:intergenic	45.0%
!	TGAGCATTGCTATGGCCATT+TGG	-	chr1_4:54432592-54432611	Msa0170430:CDS	45.0%
!!!	GGTTTTGAACGAGCTGCATA+TGG	-	chr1_4:54432945-54432964	Msa0170430:exon	45.0%
!!!	TTAATTTTTTGTTATAAAAA+TGG	-	chr1_4:54429431-54429450	Msa0170430:CDS	5.0%
	TACTACCGAAAACAGCGCCA+TGG	-	chr1_4:54428092-54428111	Msa0170430:three_prime_UTR	50.0%
!	TTTTTCTACGGTTTGCGGCG+GGG	+	chr1_4:54428146-54428165	None:intergenic	50.0%
!	GTTTTTCTACGGTTTGCGGC+GGG	+	chr1_4:54428147-54428166	None:intergenic	50.0%
!	GGTTTTTCTACGGTTTGCGG+CGG	+	chr1_4:54428148-54428167	None:intergenic	50.0%
	TACCTTTCGGAGCATGCGTT+CGG	+	chr1_4:54428223-54428242	None:intergenic	50.0%
!	AGAAGCACAGGTGCAGAAAC+TGG	-	chr1_4:54428333-54428352	Msa0170430:three_prime_UTR	50.0%
!!	GGAAGCACTGAAGAAACAGC+AGG	-	chr1_4:54428354-54428373	Msa0170430:three_prime_UTR	50.0%
	TTATCTGTGGCTGCTGCAAC+TGG	-	chr1_4:54429923-54429942	Msa0170430:CDS	50.0%
	GTAAACAGGGCCATAGAACC+AGG	-	chr1_4:54430406-54430425	Msa0170430:intron	50.0%
	AAACAGGGCCATAGAACCAG+GGG	-	chr1_4:54430408-54430427	Msa0170430:intron	50.0%
!!	TTGGTTTGGTTGTGCACTCC+TGG	-	chr1_4:54430651-54430670	Msa0170430:intron	50.0%
	ACATTATATGCAGGGGCGGA+TGG	+	chr1_4:54430686-54430705	None:intergenic	50.0%
	TGTTACAGAGACTGGCAGTG+AGG	-	chr1_4:54430875-54430894	Msa0170430:intron	50.0%
!	GCTTCTGGAAAAGCTGTGTC+TGG	-	chr1_4:54431113-54431132	Msa0170430:CDS	50.0%
!	AACTTGTTTGAAGGGCGAGG+AGG	+	chr1_4:54431312-54431331	None:intergenic	50.0%
!	GACAACTTGTTTGAAGGGCG+AGG	+	chr1_4:54431315-54431334	None:intergenic	50.0%
	TTGTCAAGGTTTGGGTCTGC+AGG	-	chr1_4:54431330-54431349	Msa0170430:intron	50.0%
	GCAGCTCAGACTTCAGAGTA+AGG	-	chr1_4:54431415-54431434	Msa0170430:intron	50.0%
	GTAAGGGAACCCTCAAGATC+AGG	-	chr1_4:54431432-54431451	Msa0170430:intron	50.0%
!!	CCTTACTCTGAAGTCTGAGC+TGG	+	chr1_4:54431418-54431437	None:intergenic	50.0%
	CCAGCTCAGACTTCAGAGTA+AGG	-	chr1_4:54431457-54431476	Msa0170430:intron	50.0%
	GTAAGGGAACCTTCAAGAGC+AGG	-	chr1_4:54431474-54431493	Msa0170430:intron	50.0%
	GTAAGGGAACCCTCAAGATC+AGG	-	chr1_4:54431432-54431451	Msa0170430:intron	50.0%
!	TGACTGGTCCCTGATCTTGA+GGG	+	chr1_4:54431528-54431547	None:intergenic	50.0%
!	ATGACTGGTCCCTGATCTTG+AGG	+	chr1_4:54431529-54431548	None:intergenic	50.0%
	TCAAGATCAGGGACCAGTCA+TGG	-	chr1_4:54431528-54431547	Msa0170430:intron	50.0%
	AGGCTTGTGAGCATCAGAGT+TGG	+	chr1_4:54431568-54431587	None:intergenic	50.0%
	ACTCTGATGCTCACAAGCCT+CGG	-	chr1_4:54431568-54431587	Msa0170430:intron	50.0%
	AGGCTTGTGAGCATCAGAGT+TGG	+	chr1_4:54431568-54431587	None:intergenic	50.0%
	ACTCTGATGCTCACAAGCCT+CGG	-	chr1_4:54431568-54431587	Msa0170430:intron	50.0%
	TTCTCCACCTGCAGGAATGA+TGG	-	chr1_4:54432563-54432582	Msa0170430:CDS	50.0%
	CAGTAAAAGAAGCTCCCTGC+AGG	+	chr1_4:54432690-54432709	None:intergenic	50.0%
!	CTGCAGGGAGCTTCTTTTAC+TGG	-	chr1_4:54432688-54432707	Msa0170430:CDS	50.0%
	GGGTCTTCATATCTGACCCT+GGG	-	chr1_4:54432792-54432811	Msa0170430:intron	50.0%
	CTTCATCTCGAGGAACCCGA+CGG	+	chr1_4:54428031-54428050	None:intergenic	55.0%
!!	GTGAGCCATGGCGCTGTTTT+CGG	+	chr1_4:54428100-54428119	None:intergenic	55.0%
	GAAAACAGCGCCATGGCTCA+CGG	-	chr1_4:54428099-54428118	Msa0170430:three_prime_UTR	55.0%
	TGTGCTTCTCTAACCTCCGC+TGG	+	chr1_4:54428322-54428341	None:intergenic	55.0%
!	AGCGGAGGTTAGAGAAGCAC+AGG	-	chr1_4:54428321-54428340	Msa0170430:three_prime_UTR	55.0%
	TATTCACACTCGCCTCGCTG+TGG	-	chr1_4:54428378-54428397	Msa0170430:three_prime_UTR	55.0%
	TTGGGAGAGCTAGTGGAGAC+AGG	-	chr1_4:54429325-54429344	Msa0170430:intron	55.0%
!	AGGGTTGCATTGGCCCACAT+AGG	+	chr1_4:54430450-54430469	None:intergenic	55.0%
	GAGACTGGCAGTGAGGATGA+CGG	-	chr1_4:54430882-54430901	Msa0170430:intron	55.0%
!	CAGTGAGGATGACGGTCTTC+TGG	-	chr1_4:54430890-54430909	Msa0170430:intron	55.0%
	GAGCAGGCTTCTAGTGCTTC+TGG	-	chr1_4:54431098-54431117	Msa0170430:CDS	55.0%
!!	AGGAGGAGGCATCAAAGCTC+TGG	+	chr1_4:54431295-54431314	None:intergenic	55.0%
	TTGTTTGAAGGGCGAGGAGG+AGG	+	chr1_4:54431309-54431328	None:intergenic	55.0%
	GAGCTGGTCCCTGATCTTGA+GGG	+	chr1_4:54431444-54431463	None:intergenic	55.0%
	TGAGCTGGTCCCTGATCTTG+AGG	+	chr1_4:54431445-54431464	None:intergenic	55.0%
	ACTGGACGGGACATGTTCTG+TGG	-	chr1_4:54432660-54432679	Msa0170430:CDS	55.0%
!!	ATGTTCTGTGGTGGACCTGC+AGG	-	chr1_4:54432672-54432691	Msa0170430:CDS	55.0%
!!	TGTTCTGTGGTGGACCTGCA+GGG	-	chr1_4:54432673-54432692	Msa0170430:CDS	55.0%
	GGGGTCTTCATATCTGACCC+TGG	-	chr1_4:54432791-54432810	Msa0170430:intron	55.0%
	ATCTCGAGGAACCCGACGGA+GGG	+	chr1_4:54428027-54428046	None:intergenic	60.0%
	TGCGTTCGGCGGATCGGATT+TGG	+	chr1_4:54428209-54428228	None:intergenic	60.0%
	CTTTCGGAGCATGCGTTCGG+CGG	+	chr1_4:54428220-54428239	None:intergenic	60.0%
	TGTGGCTGCTGCAACTGGCA+AGG	-	chr1_4:54429928-54429947	Msa0170430:CDS	60.0%
!!	TGGCTCCACCCCTGGTTCTA+TGG	+	chr1_4:54430419-54430438	None:intergenic	60.0%
	TAGAACCAGGGGTGGAGCCA+AGG	-	chr1_4:54430419-54430438	Msa0170430:intron	60.0%
	AGAACCAGGGGTGGAGCCAA+GGG	-	chr1_4:54430420-54430439	Msa0170430:intron	60.0%
	AGCCAAGGGGTGGCCTATGT+GGG	-	chr1_4:54430434-54430453	Msa0170430:intron	60.0%
	GAGCTGGTCCCTGCTCTTGA+AGG	+	chr1_4:54431486-54431505	None:intergenic	60.0%
	GATGCTCACAAGCCTCGGAC+AGG	-	chr1_4:54431573-54431592	Msa0170430:intron	60.0%
	CACAAGCCTCGGACAGGTCA+TGG	-	chr1_4:54431579-54431598	Msa0170430:intron	60.0%
	CTACTGCCATGACCTGTCCG+AGG	+	chr1_4:54431588-54431607	None:intergenic	60.0%
	GGACGGGACATGTTCTGTGG+TGG	-	chr1_4:54432663-54432682	Msa0170430:CDS	60.0%
	CATCTCGAGGAACCCGACGG+AGG	+	chr1_4:54428028-54428047	None:intergenic	65.0%
	AACAGCGCCATGGCTCACGG+CGG	-	chr1_4:54428102-54428121	Msa0170430:three_prime_UTR	65.0%
	TTCTACGGTTTGCGGCGGGG+CGG	+	chr1_4:54428143-54428162	None:intergenic	65.0%
	GGAGCATGCGTTCGGCGGAT+CGG	+	chr1_4:54428215-54428234	None:intergenic	65.0%
	CGCCGAACGCATGCTCCGAA+AGG	-	chr1_4:54428218-54428237	Msa0170430:three_prime_UTR	65.0%
	CAGGGCCATAGAACCAGGGG+TGG	-	chr1_4:54430411-54430430	Msa0170430:intron	65.0%
	GAACCAGGGGTGGAGCCAAG+GGG	-	chr1_4:54430421-54430440	Msa0170430:intron	65.0%
	GAGCCAAGGGGTGGCCTATG+TGG	-	chr1_4:54430433-54430452	Msa0170430:intron	65.0%
	GGCCCACATAGGCCACCCCT+TGG	+	chr1_4:54430439-54430458	None:intergenic	70.0%
	AGCGCCATGGCTCACGGCGG+CGG	-	chr1_4:54428105-54428124	Msa0170430:three_prime_UTR	75.0%
	GACACCGCCGCCGTGAGCCA+TGG	+	chr1_4:54428112-54428131	None:intergenic	75.0%
	CCACCCCTTGGCTCCACCCC+TGG	+	chr1_4:54430427-54430446	None:intergenic	75.0%
	CCAGGGGTGGAGCCAAGGGG+TGG	-	chr1_4:54430424-54430443	Msa0170430:intron	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	54427968	54433088	54427968	ID=Msa0170430;Name=Msa0170430
chr1_4	mRNA	54427968	54433088	54427968	ID=Msa0170430-mRNA-1;Parent=Msa0170430;Name=Msa0170430-mRNA-1;_AED=0.06;_eAED=0.06;_QI=143\|0.83\|0.71\|1\|0.83\|1\|7\|506\|333
chr1_4	exon	54427968	54428479	54427968	ID=Msa0170430-mRNA-1:exon:16270;Parent=Msa0170430-mRNA-1
chr1_4	exon	54429382	54429777	54429382	ID=Msa0170430-mRNA-1:exon:16269;Parent=Msa0170430-mRNA-1
chr1_4	exon	54429896	54429959	54429896	ID=Msa0170430-mRNA-1:exon:16268;Parent=Msa0170430-mRNA-1
chr1_4	exon	54430059	54430173	54430059	ID=Msa0170430-mRNA-1:exon:16267;Parent=Msa0170430-mRNA-1
chr1_4	exon	54431097	54431197	54431097	ID=Msa0170430-mRNA-1:exon:16266;Parent=Msa0170430-mRNA-1
chr1_4	exon	54432553	54432743	54432553	ID=Msa0170430-mRNA-1:exon:16265;Parent=Msa0170430-mRNA-1
chr1_4	exon	54432817	54433088	54432817	ID=Msa0170430-mRNA-1:exon:16264;Parent=Msa0170430-mRNA-1
chr1_4	five_prime_UTR	54432946	54433088	54432946	ID=Msa0170430-mRNA-1:five_prime_utr;Parent=Msa0170430-mRNA-1
chr1_4	CDS	54432817	54432945	54432817	ID=Msa0170430-mRNA-1:cds;Parent=Msa0170430-mRNA-1
chr1_4	CDS	54432553	54432743	54432553	ID=Msa0170430-mRNA-1:cds;Parent=Msa0170430-mRNA-1
chr1_4	CDS	54431097	54431197	54431097	ID=Msa0170430-mRNA-1:cds;Parent=Msa0170430-mRNA-1
chr1_4	CDS	54430059	54430173	54430059	ID=Msa0170430-mRNA-1:cds;Parent=Msa0170430-mRNA-1
chr1_4	CDS	54429896	54429959	54429896	ID=Msa0170430-mRNA-1:cds;Parent=Msa0170430-mRNA-1
chr1_4	CDS	54429382	54429777	54429382	ID=Msa0170430-mRNA-1:cds;Parent=Msa0170430-mRNA-1
chr1_4	CDS	54428474	54428479	54428474	ID=Msa0170430-mRNA-1:cds;Parent=Msa0170430-mRNA-1
chr1_4	three_prime_UTR	54427968	54428473	54427968	ID=Msa0170430-mRNA-1:three_prime_utr;Parent=Msa0170430-mRNA-1

Gene Sequence

>Msa0170430

ATGGCTCACGGCGGCGGTGTCAACAAGCGCCGCCCCGCCGCAAACCGTAGAAAAACCACCGCCAAGAAATTCAAACCACCCGTTTCTCTCAAAAACCAAATCCGATCCGCCGAACGCATGCTCCGAAAGAATTTACCAGCGGAGGTTAGAGAAGCACAGGTGCAGAAACTGGAAGCACTGAAGAAACAGCAGGATATTCACACTCGCCTCGCTGTGGAACGTAAGATATTCTTACGTGATAAGAAGATTAAGTTCTTTGAGAGGAGAAAAATTGAACGGAGAATTAGACGCTTAGAGAAGCTTCAGCGAGCTTCTTCGTCTGGAACTGATGATGCGGAGATAGTTGACAAGCGAAATGGGCTGCGCAAACAGATTGAAGAGAGGTTATCTGTGGCTGCTGCAACTGGCAAGGATTTAGAAGAGACTGGCAGTGAGGATGACGGTCTTCTGGATCTCAGTGATGATGATTTTTTTCTTCCTGGAAGTTCTAGTGATGAAGCTGACGCAGATGATGAATTGACAGACAAAAGTACCAGAGAGCAGGCTTCTAGTGCTTCTGGAAAAGCTGTGTCTGGCATGTCCAGCGATGAAAAAAATCAGAGGCAGATTTCTGCCAGAGCTTTGATGCCTCCTCCTCGCCCTTCAAACAAGTTGTCAAGGTTTGGGTCTGCAGGCCAAAATTCATCTAAACAGAGATCTGATATTTCTACATCCCGCTACGCATCAAACAGCAAAAGCAGCTCAGACTTCAGAGTAAGGGAACCCTCAAGATCAGGGACCAGCTCAGACTTCAGAGTAAGGGAACCTTCAAGAGCAGGGACCAGCTCAGACTTTAGAGTAAGGGAACCCTCAAGATCAGGGACCAGTCATGGTAGTAGTCTAAGCTCCAACTCTGATGCTCACAAGCCTCGGACAGGTCATGGCAGTAGTCTAAGCTCCAACTCTGATGCTCACAAGCCTCGGAGAAAGAGAAGACCTAAGAAGAAAAAGAAGCAGGAATGA

Protein sequence

>Msa0170430

MAHGGGVNKRRPAANRRKTTAKKFKPPVSLKNQIRSAERMLRKNLPAEVREAQVQKLEALKKQQDIHTRLAVERKIFLRDKKIKFFERRKIERRIRRLEKLQRASSSGTDDAEIVDKRNGLRKQIEERLSVAAATGKDLEETGSEDDGLLDLSDDDFFLPGSSSDEADADDELTDKSTREQASSASGKAVSGMSSDEKNQRQISARALMPPPRPSNKLSRFGSAGQNSSKQRSDISTSRYASNSKSSSDFRVREPSRSGTSSDFRVREPSRAGTSSDFRVREPSRSGTSHGSSLSSNSDAHKPRTGHGSSLSSNSDAHKPRRKRRPKKKKKQE*