AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0297860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0297860 MtrunA17_Chr2g0321131 84.960 379 45 2 159 526 17 394 0.0 658
Msa0297860 MtrunA17_Chr2g0321131 95.495 111 4 1 27 137 1 110 1.06e-66 221
Msa0297860 MtrunA17_Chr3g0095421 26.923 312 179 13 229 513 70 359 3.00e-19 89.7
Msa0297860 MtrunA17_Chr3g0127491 25.543 184 122 5 242 412 81 262 3.66e-11 65.1
Msa0297860 MtrunA17_Chr7g0274071 24.149 323 205 12 202 505 16 317 8.35e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0297860 AT2G27680.1 78.510 349 63 2 188 525 36 383 0.0 588
Msa0297860 AT2G27680.1 76.923 65 15 0 73 137 36 100 9.48e-28 115
Msa0297860 AT1G06690.1 27.759 299 170 12 202 476 49 325 6.82e-19 89.0
Msa0297860 AT5G53580.1 23.019 265 173 9 225 474 63 311 4.37e-12 68.2

Find 116 sgRNAs with CRISPR-Local

Find 302 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAATTTCAATTCTCCAATT+TGG 0.179335 2_3:-51659828 Msa0297860:CDS
CCAAATTGGAGAATTGAAAT+TGG 0.221854 2_3:+51659828 None:intergenic
GAAATATGTAGAGTTCTTAA+TGG 0.252504 2_3:-51659573 Msa0297860:CDS
GCAGAGCTTTGTCAGCTTAC+AGG 0.253188 2_3:-51656310 Msa0297860:CDS
AGGTGGGATTATTCAAATTC+AGG 0.258984 2_3:-51656674 Msa0297860:CDS
CTTGTTGCAATTCCTCTTGT+TGG 0.278987 2_3:+51657912 None:intergenic
GTGGATGCTTGGGGAGGATG+GGG 0.330296 2_3:-51655886 Msa0297860:CDS
TGGATTAACCACTTTCGATA+TGG 0.343690 2_3:-51657700 Msa0297860:CDS
ATGGCAGATGGTGGATGCTT+GGG 0.345508 2_3:-51655896 Msa0297860:intron
AAGCTACTTGTCATCTTAAC+TGG 0.356854 2_3:+51656983 None:intergenic
GCGGATGGGGCAGAATTGAT+AGG 0.361415 2_3:-51657761 Msa0297860:CDS
GGTGGATGCTTGGGGAGGAT+GGG 0.363054 2_3:-51655887 Msa0297860:CDS
GTGGCAGACAAGTGGTGGTT+GGG 0.363851 2_3:-51659547 Msa0297860:CDS
GGGCCAGCTGAAGATCTATA+TGG 0.364721 2_3:-51657262 Msa0297860:CDS
AAGAGGATAACGAACCAAAT+TGG 0.367025 2_3:+51659814 None:intergenic
TGGTGGATGCTTGGGGAGGA+TGG 0.377292 2_3:-51655888 Msa0297860:CDS
AAGAAGATGTAAACAGCATA+AGG 0.390321 2_3:-51655453 Msa0297860:CDS
AAGGATCTTCTTAAAGTGAT+TGG 0.395916 2_3:-51655412 Msa0297860:CDS
CATCCCTCTCAAAATACAAA+AGG 0.396975 2_3:-51656074 Msa0297860:CDS
CAGTAATGGGAAGGATTCAT+TGG 0.414164 2_3:-51657823 Msa0297860:CDS
CGGCGCATTGTGGTCAGTAA+TGG 0.422536 2_3:-51657837 Msa0297860:CDS
TGGATATGCTTCAGTTCCAT+TGG 0.423981 2_3:-51656910 Msa0297860:intron
CATGGCAGATGGTGGATGCT+TGG 0.430168 2_3:-51655897 Msa0297860:intron
CAATGCGCCGATTATCCTCC+TGG 0.430412 2_3:+51657850 None:intergenic
AGGGATGGAGTGTTAATTGC+AGG 0.432846 2_3:+51656090 None:intergenic
GAGAATGGACGTGGAATCCT+TGG 0.433488 2_3:-51656930 Msa0297860:CDS
GGTTCTCTGTGAGTGGGGAT+TGG 0.441664 2_3:+51659707 None:intergenic
GTTGTTGAAGCGAGTGAAAG+TGG 0.443100 2_3:+51659740 None:intergenic
ATGCTTAAATACGCTGATGC+TGG 0.448278 2_3:-51657720 Msa0297860:CDS
ATGCTCCGGTATGCTGATTC+CGG 0.449274 2_3:-51659492 Msa0297860:CDS
TGACTACCCAGGAGGATAAT+CGG 0.450628 2_3:-51657857 Msa0297860:CDS
TCGAATCAATCTTGCGCTGT+TGG 0.455461 2_3:+51659686 None:intergenic
GGCGCATTGTGGTCAGTAAT+GGG 0.456036 2_3:-51657836 Msa0297860:CDS
TTAATTGCAGGTCCAGCAAA+AGG 0.456349 2_3:+51656102 None:intergenic
GGAGGATGGGGTTTGTTCCA+AGG 0.459555 2_3:-51655874 Msa0297860:CDS
TGCAGGTATGGGACAGTAAT+GGG 0.460926 2_3:-51656168 Msa0297860:intron
CGCTGTTGGTTCTCTGTGAG+TGG 0.468927 2_3:+51659700 None:intergenic
TAAGAGTTCGAAGAAGTCCT+TGG 0.474989 2_3:+51655857 None:intergenic
TGGCAAACGAGTGGCGGATG+GGG 0.475308 2_3:-51657774 Msa0297860:CDS
AACCTGCAGCCTGCTGTAGC+AGG 0.486594 2_3:-51655653 Msa0297860:intron
AGCGAGTGAAAGTGGAGAAT+AGG 0.486717 2_3:+51659748 None:intergenic
GATATAACTCGGGTTGTGAA+TGG 0.486800 2_3:-51657801 Msa0297860:CDS
TGTGGCAGACAAGTGGTGGT+TGG 0.493594 2_3:-51659548 Msa0297860:CDS
GCTGTTGGTTCTCTGTGAGT+GGG 0.496090 2_3:+51659701 None:intergenic
GTGGCAAACGAGTGGCGGAT+GGG 0.497300 2_3:-51657775 Msa0297860:CDS
TGTGGCAAACGAGTGGCGGA+TGG 0.498373 2_3:-51657776 Msa0297860:CDS
GATTCCCATTGTGAGCAATC+AGG 0.502650 2_3:-51656462 Msa0297860:intron
GAGTAACGGAAACGATTCAT+TGG 0.507063 2_3:-51659595 Msa0297860:CDS
TCTACCTGATTGCTCACAAT+GGG 0.509738 2_3:+51656458 None:intergenic
CTTGTCATCTTAACTGGTGG+TGG 0.516768 2_3:+51656989 None:intergenic
TGGCAGACAAGTGGTGGTTG+GGG 0.516858 2_3:-51659546 Msa0297860:CDS
ATCCCTCTCAAAATACAAAA+GGG 0.521470 2_3:-51656073 Msa0297860:intron
CTTAAAGTGATTGGTGATTG+TGG 0.523513 2_3:-51655403 Msa0297860:CDS
GGCCAGCTGAAGATCTATAT+GGG 0.529176 2_3:-51657261 Msa0297860:CDS
TAATGTGTCAAGGAAGAGAA+TGG 0.530921 2_3:-51656945 Msa0297860:CDS
TATATCAGCCATATCGAAAG+TGG 0.533886 2_3:+51657692 None:intergenic
ACCATTGATCCTGCTACAGC+AGG 0.539745 2_3:+51655644 None:intergenic
GGATGTTTATGTTGGTGTCA+AGG 0.543246 2_3:+51656124 None:intergenic
TTTGATGCAGTCTCACTAAG+TGG 0.545643 2_3:-51657015 Msa0297860:intron
AGGATTCATTGGATATAACT+CGG 0.549335 2_3:-51657812 Msa0297860:CDS
AGAAGATGTAAACAGCATAA+GGG 0.550057 2_3:-51655452 Msa0297860:CDS
TGGCAGATGGTGGATGCTTG+GGG 0.552987 2_3:-51655895 Msa0297860:intron
AGCAAAAGGGATGTTTATGT+TGG 0.553357 2_3:+51656116 None:intergenic
GCCTGCTGTAGCAGGATCAA+TGG 0.555540 2_3:-51655645 Msa0297860:CDS
CGGATGGGGCAGAATTGATA+GGG 0.555760 2_3:-51657760 Msa0297860:CDS
CATGTCGAAGGTAGATAAGC+CGG 0.559207 2_3:+51659473 None:intergenic
CGGCTTATCTACCTTCGACA+TGG 0.566100 2_3:-51659472 Msa0297860:CDS
ATCCCATATAGATCTTCAGC+TGG 0.568807 2_3:+51657259 None:intergenic
AAACACCTCACAGACTTGAA+AGG 0.575581 2_3:-51656635 Msa0297860:CDS
GGATTCATTGGATATAACTC+GGG 0.575840 2_3:-51657811 Msa0297860:CDS
GAGACAACATTAATGTGTCA+AGG 0.581488 2_3:-51656955 Msa0297860:CDS
AAACAAGTATCTACTAAGCA+TGG 0.581998 2_3:-51655835 Msa0297860:CDS
GCTGTAGCAGGATCAATGGT+TGG 0.583139 2_3:-51655641 Msa0297860:intron
TTGATGCAGTCTCACTAAGT+GGG 0.585207 2_3:-51657014 Msa0297860:intron
ATGCAGGTATGGGACAGTAA+TGG 0.585251 2_3:-51656169 Msa0297860:intron
AACAGCATAAGGGAAGCAGC+AGG 0.585347 2_3:-51655442 Msa0297860:CDS
CTCACAGACTTGAAAGGAGA+AGG 0.587621 2_3:-51656629 Msa0297860:intron
ATATACTTCACAGCAACAGT+TGG 0.588134 2_3:+51655802 None:intergenic
GTCAAGGAAGAGAATGGACG+TGG 0.589441 2_3:-51656939 Msa0297860:CDS
ATACCGGAGCATAGCTTCAA+CGG 0.594485 2_3:+51659503 None:intergenic
GGGCAGAATTGATAGGGATG+AGG 0.595138 2_3:-51657754 Msa0297860:CDS
TAATTGCAGGTCCAGCAAAA+GGG 0.596248 2_3:+51656103 None:intergenic
ATAAGGGAAGCAGCAGGGAA+AGG 0.597100 2_3:-51655436 Msa0297860:CDS
GTCTACCTGATTGCTCACAA+TGG 0.599622 2_3:+51656457 None:intergenic
TTGATTCGAATTCGATGCAG+TGG 0.601417 2_3:-51659672 Msa0297860:CDS
TGAAAGTGGAGAATAGGTTG+TGG 0.603049 2_3:+51659754 None:intergenic
ATAAGCCGGAATCAGCATAC+CGG 0.610129 2_3:+51659487 None:intergenic
CAGATGGTGGATGCTTGGGG+AGG 0.612252 2_3:-51655892 Msa0297860:CDS
GTAGAGTTCTTAATGGAATG+TGG 0.613884 2_3:-51659566 Msa0297860:CDS
GTGATTGTGGAGATGAGTAC+AGG 0.615695 2_3:-51655390 Msa0297860:CDS
AATGCGCCGATTATCCTCCT+GGG 0.616469 2_3:+51657851 None:intergenic
CATTGTGGTCAGTAATGGGA+AGG 0.617606 2_3:-51657832 Msa0297860:CDS
TGGGTAGTCACACACTGACA+TGG 0.621295 2_3:+51657870 None:intergenic
TCGAACAGAACACCAACAAG+AGG 0.621642 2_3:-51657924 Msa0297860:CDS
ACGCCGTTGAAGCTATGCTC+CGG 0.621896 2_3:-51659506 Msa0297860:CDS
GGAGGATAATCGGCGCATTG+TGG 0.623021 2_3:-51657847 Msa0297860:CDS
GCTTGAAGATACCACTGCCA+TGG 0.626100 2_3:+51659776 None:intergenic
CTTCTCCTTTCAAGTCTGTG+AGG 0.630876 2_3:+51656630 None:intergenic
ATGGAACTGAAGCATATCCA+AGG 0.631653 2_3:+51656913 None:intergenic
CTGTTGGTTCTCTGTGAGTG+GGG 0.634903 2_3:+51659702 None:intergenic
TCAATCGAGTTCGTCGTGAG+CGG 0.637046 2_3:-51657231 Msa0297860:CDS
GGAAGCAGCAGGGAAAGGCA+AGG 0.645795 2_3:-51655431 Msa0297860:CDS
GGCAGACAAGTGGTGGTTGG+GGG 0.649705 2_3:-51659545 Msa0297860:CDS
ACAGCATAAGGGAAGCAGCA+GGG 0.652098 2_3:-51655441 Msa0297860:CDS
CAGCGAGTGAAACTGAGTAA+CGG 0.654769 2_3:-51659609 Msa0297860:CDS
CTACTTGTCATCTTAACTGG+TGG 0.658791 2_3:+51656986 None:intergenic
GGAATGTGGCAAACGAGTGG+CGG 0.659714 2_3:-51657780 Msa0297860:CDS
TGTGAAGTATATACTAGACC+AGG 0.663396 2_3:-51655791 Msa0297860:intron
ATGTCAGTGTGTGACTACCC+AGG 0.665991 2_3:-51657868 Msa0297860:CDS
ACAGTGATCAGCCATGTCGA+AGG 0.668855 2_3:+51659461 None:intergenic
CTCGGGTTGTGAATGGAATG+TGG 0.682270 2_3:-51657794 Msa0297860:CDS
GGAATGTGGCAGACAAGTGG+TGG 0.686815 2_3:-51659552 Msa0297860:CDS
AATGGAATGTGGCAAACGAG+TGG 0.701010 2_3:-51657783 Msa0297860:CDS
AATGGAATGTGGCAGACAAG+TGG 0.706632 2_3:-51659555 Msa0297860:CDS
AGGTATGGGACAGTAATGGG+TGG 0.729235 2_3:-51656165 Msa0297860:CDS
TCAGTGTGTGACTACCCAGG+AGG 0.784654 2_3:-51657865 Msa0297860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTGTTACAAAAA+TGG - chr2_3:51656230-51656249 Msa0297860:intron 10.0%
!!! TTTTTTTTTGTTACAAAAAT+GGG - chr2_3:51656231-51656250 Msa0297860:intron 10.0%
!!! AACTTTTAAAGAATAAAATA+TGG + chr2_3:51656886-51656905 None:intergenic 10.0%
!!! TATATTTCATTTTTTTTTTG+AGG - chr2_3:51657069-51657088 Msa0297860:intron 10.0%
!! TCATATATATTTCATATTTA+TGG - chr2_3:51657097-51657116 Msa0297860:intron 10.0%
!!! TTTTTTTTGTTACAAAAATG+GGG - chr2_3:51656232-51656251 Msa0297860:intron 15.0%
!!! AGTCAAATTCTTAAATTTTA+TGG - chr2_3:51656715-51656734 Msa0297860:intron 15.0%
!!! AGCAATTTGATTTTTATTTT+TGG - chr2_3:51657015-51657034 Msa0297860:intron 15.0%
!! TGAAATAATTTCTTAAATGA+GGG + chr2_3:51658970-51658989 None:intergenic 15.0%
!! ATGAAATAATTTCTTAAATG+AGG + chr2_3:51658971-51658990 None:intergenic 15.0%
!! ATCTCATATTGATATTAAAT+TGG - chr2_3:51659516-51659535 Msa0297860:CDS 15.0%
!!! TTTTTGCTTATAAATATGAC+CGG + chr2_3:51655944-51655963 None:intergenic 20.0%
!!! AAACTTTTTTGTTTTTTGAG+AGG - chr2_3:51656441-51656460 Msa0297860:intron 20.0%
!! ACTTATAAAACCAACATATA+GGG + chr2_3:51656530-51656549 None:intergenic 20.0%
!! AACTTATAAAACCAACATAT+AGG + chr2_3:51656531-51656550 None:intergenic 20.0%
!! ATTTGAGAACTTATGAAAAT+AGG - chr2_3:51656553-51656572 Msa0297860:intron 20.0%
!!! TGAATTTTGTTAAACTGTTT+GGG + chr2_3:51656626-51656645 None:intergenic 20.0%
!! TTAGCAAAACTAATTCAAAA+TGG + chr2_3:51656847-51656866 None:intergenic 20.0%
!!! ATTTTGAATTAGTTTTGCTA+AGG - chr2_3:51656846-51656865 Msa0297860:intron 20.0%
!! ATGAAAAAATCAAAACAGAA+CGG + chr2_3:51656978-51656997 None:intergenic 20.0%
!! ATATTTATGGAAAATAAGAG+TGG - chr2_3:51657110-51657129 Msa0297860:intron 20.0%
!! ACAATCAAGAATTGTATTAT+AGG + chr2_3:51658148-51658167 None:intergenic 20.0%
!!! ATTTCACTTTAATCTCATTT+TGG + chr2_3:51659008-51659027 None:intergenic 20.0%
!!! TATTTGTTTGATTTTGGTTA+TGG - chr2_3:51659554-51659573 Msa0297860:CDS 20.0%
!!! GAAATTGGAAATGTTTTAGT+TGG + chr2_3:51655393-51655412 None:intergenic 25.0%
! GAAATATGTAGAGTTCTTAA+TGG - chr2_3:51655660-51655679 Msa0297860:intron 25.0%
! TCATCAAAGAGAAAAATCTA+AGG + chr2_3:51655874-51655893 None:intergenic 25.0%
! ACTATTCAATGTATCTACAA+AGG + chr2_3:51655971-51655990 None:intergenic 25.0%
! ATGTATACAGTCACATTTAT+AGG + chr2_3:51656006-51656025 None:intergenic 25.0%
! TGATGACTGAAAATTCAATT+TGG - chr2_3:51656053-51656072 Msa0297860:intron 25.0%
!!! GGATTTTTTGTCCAAAATTT+AGG - chr2_3:51656462-51656481 Msa0297860:intron 25.0%
!! ATCCTTTGAATCCTAAATTT+TGG + chr2_3:51656476-51656495 None:intergenic 25.0%
!! TTTTTGTATACCCTATATGT+TGG - chr2_3:51656517-51656536 Msa0297860:CDS 25.0%
!! CTGAATTTTGTTAAACTGTT+TGG + chr2_3:51656627-51656646 None:intergenic 25.0%
! CAAACAGTTTAACAAAATTC+AGG - chr2_3:51656625-51656644 Msa0297860:intron 25.0%
!!! CTTTAAAGTAAAGAGTCTAA+TGG + chr2_3:51656694-51656713 None:intergenic 25.0%
! ATTTGACAGCAAATATTATG+TGG - chr2_3:51656941-51656960 Msa0297860:CDS 25.0%
! CCATATATTTATACTTTACG+TGG + chr2_3:51657138-51657157 None:intergenic 25.0%
! CCACGTAAAGTATAAATATA+TGG - chr2_3:51657135-51657154 Msa0297860:intron 25.0%
! CGTAAAGTATAAATATATGG+TGG - chr2_3:51657138-51657157 Msa0297860:intron 25.0%
!!! TACTTTTCACACTTTGAAAA+TGG - chr2_3:51657242-51657261 Msa0297860:CDS 25.0%
!!! TCAAATCTTTTTGAGAATTG+TGG + chr2_3:51657625-51657644 None:intergenic 25.0%
! GATGGATACATTAAGTTAAA+TGG + chr2_3:51657777-51657796 None:intergenic 25.0%
!!! TCTCATTTGTTGTGTTTTTT+TGG - chr2_3:51657938-51657957 Msa0297860:CDS 25.0%
! TCAAGAATTGTATTATAGGA+TGG + chr2_3:51658144-51658163 None:intergenic 25.0%
! ATTTATCTCAGTAACATACT+AGG + chr2_3:51658434-51658453 None:intergenic 25.0%
!!! CCTAAATTTGTTACAGATAA+AGG + chr2_3:51658542-51658561 None:intergenic 25.0%
! CCTTTATCTGTAACAAATTT+AGG - chr2_3:51658539-51658558 Msa0297860:intron 25.0%
! TTATCTGTAACAAATTTAGG+TGG - chr2_3:51658542-51658561 Msa0297860:intron 25.0%
! TATCTGTAACAAATTTAGGT+GGG - chr2_3:51658543-51658562 Msa0297860:intron 25.0%
! GTTTGCTTAAATCAAGAAAT+GGG + chr2_3:51658662-51658681 None:intergenic 25.0%
!! AGTTTGCTTAAATCAAGAAA+TGG + chr2_3:51658663-51658682 None:intergenic 25.0%
!!! TAACAAATTTTGATACTGAG+AGG - chr2_3:51658725-51658744 Msa0297860:intron 25.0%
! AGTTTATATAAACTTACTGC+TGG - chr2_3:51658825-51658844 Msa0297860:intron 25.0%
! TAACTTCAGATAGTTAATGA+TGG + chr2_3:51659199-51659218 None:intergenic 25.0%
! AATCAAACAAATATCCAACA+GGG + chr2_3:51659547-51659566 None:intergenic 25.0%
! AAATCAAACAAATATCCAAC+AGG + chr2_3:51659548-51659567 None:intergenic 25.0%
!!! GTTGGATATTTGTTTGATTT+TGG - chr2_3:51659548-51659567 Msa0297860:CDS 25.0%
CCAAATTGGAGAATTGAAAT+TGG + chr2_3:51655408-51655427 None:intergenic 30.0%
CCAATTTCAATTCTCCAATT+TGG - chr2_3:51655405-51655424 Msa0297860:CDS 30.0%
TTCTTCTTCTCAAAAATCCA+TGG - chr2_3:51655440-51655459 Msa0297860:CDS 30.0%
ATGAATACAGAGAAAATGAG+TGG + chr2_3:51655810-51655829 None:intergenic 30.0%
TATACATTAACCAATGTGAC+CGG - chr2_3:51656019-51656038 Msa0297860:intron 30.0%
CCAGAGATAAATTAGTTCAT+CGG + chr2_3:51656112-51656131 None:intergenic 30.0%
TTTGTTACAAAAATGGGGAA+TGG - chr2_3:51656237-51656256 Msa0297860:intron 30.0%
GGAAAAATAAATTCGCTAGA+AGG - chr2_3:51656258-51656277 Msa0297860:intron 30.0%
AAAATAAATTCGCTAGAAGG+AGG - chr2_3:51656261-51656280 Msa0297860:intron 30.0%
AAATAAATTCGCTAGAAGGA+GGG - chr2_3:51656262-51656281 Msa0297860:intron 30.0%
ATAACTAAAAACAGAGCAGT+TGG + chr2_3:51656404-51656423 None:intergenic 30.0%
! GTCCAAAATTTAGGATTCAA+AGG - chr2_3:51656471-51656490 Msa0297860:CDS 30.0%
AGGATTCATTGGATATAACT+CGG - chr2_3:51657421-51657440 Msa0297860:intron 30.0%
ACATGGACTCAAAAGAAATT+AGG + chr2_3:51657600-51657619 None:intergenic 30.0%
!! TTTTGAGAATTGTGGTTACA+TGG + chr2_3:51657617-51657636 None:intergenic 30.0%
TAAAACCACCTGTAAGAATT+AGG + chr2_3:51657703-51657722 None:intergenic 30.0%
TCTAAACACTTCTACTCTAA+TGG + chr2_3:51657799-51657818 None:intergenic 30.0%
!! AATTTTTGGAAAAGGTCAGA+GGG - chr2_3:51658032-51658051 Msa0297860:intron 30.0%
AAATGACCATAGAACATAGA+AGG - chr2_3:51658173-51658192 Msa0297860:intron 30.0%
GACTGCATCAAATAATACAA+TGG + chr2_3:51658210-51658229 None:intergenic 30.0%
! TTTTACAGTTCCTCATAACA+CGG - chr2_3:51658389-51658408 Msa0297860:intron 30.0%
ATGATAATTCTGATTCTCTG+AGG - chr2_3:51658493-51658512 Msa0297860:intron 30.0%
! TATTTCTGTTAACCTTGTAC+AGG - chr2_3:51658682-51658701 Msa0297860:intron 30.0%
!!! GTTTTGATTTTACCTGTACA+AGG + chr2_3:51658697-51658716 None:intergenic 30.0%
! GAAGAGAAATTAAAGCACTT+GGG + chr2_3:51658801-51658820 None:intergenic 30.0%
! AGAAGAGAAATTAAAGCACT+TGG + chr2_3:51658802-51658821 None:intergenic 30.0%
! TATAAAGTATCTTCACTGTC+AGG - chr2_3:51658859-51658878 Msa0297860:intron 30.0%
ATCCCTCTCAAAATACAAAA+GGG - chr2_3:51659160-51659179 Msa0297860:intron 30.0%
!! TACCCTTTTGTATTTTGAGA+GGG + chr2_3:51659165-51659184 None:intergenic 30.0%
!! TTACCCTTTTGTATTTTGAG+AGG + chr2_3:51659166-51659185 None:intergenic 30.0%
AAACAAGTATCTACTAAGCA+TGG - chr2_3:51659398-51659417 Msa0297860:intron 30.0%
AAGAAGATGTAAACAGCATA+AGG - chr2_3:51659780-51659799 Msa0297860:CDS 30.0%
AGAAGATGTAAACAGCATAA+GGG - chr2_3:51659781-51659800 Msa0297860:CDS 30.0%
AAGGATCTTCTTAAAGTGAT+TGG - chr2_3:51659821-51659840 Msa0297860:CDS 30.0%
AAGAGGATAACGAACCAAAT+TGG + chr2_3:51655422-51655441 None:intergenic 35.0%
!! GGATTTTTGAGAAGAAGAAG+AGG + chr2_3:51655439-51655458 None:intergenic 35.0%
GTAGAGTTCTTAATGGAATG+TGG - chr2_3:51655667-51655686 Msa0297860:intron 35.0%
! CATTCTGTTCTATGATGATG+TGG - chr2_3:51655837-51655856 Msa0297860:CDS 35.0%
!!! GATTTTTCTCTTTGATGACG+TGG - chr2_3:51655876-51655895 Msa0297860:CDS 35.0%
TTATTGAGAATTACTCCCTC+CGG - chr2_3:51655922-51655941 Msa0297860:intron 35.0%
TGCTTATAAATATGACCGGA+GGG + chr2_3:51655940-51655959 None:intergenic 35.0%
TTGCTTATAAATATGACCGG+AGG + chr2_3:51655941-51655960 None:intergenic 35.0%
! ATTTTCTTGCCCAACTTAGT+TGG - chr2_3:51656084-51656103 Msa0297860:CDS 35.0%
! TTTTCTTGCCCAACTTAGTT+GGG - chr2_3:51656085-51656104 Msa0297860:CDS 35.0%
CCGATGAACTAATTTATCTC+TGG - chr2_3:51656109-51656128 Msa0297860:CDS 35.0%
AATGTCAAACCAGTTTGAGT+CGG - chr2_3:51656139-51656158 Msa0297860:CDS 35.0%
AGTCACTCACTACTATAGAT+TGG - chr2_3:51656201-51656220 Msa0297860:intron 35.0%
AATAAATTCGCTAGAAGGAG+GGG - chr2_3:51656263-51656282 Msa0297860:intron 35.0%
CAACTTGAGAAGTTGCATAA+AGG - chr2_3:51657184-51657203 Msa0297860:intron 35.0%
GGATTCATTGGATATAACTC+GGG - chr2_3:51657422-51657441 Msa0297860:intron 35.0%
TGGATTAACCACTTTCGATA+TGG - chr2_3:51657533-51657552 Msa0297860:intron 35.0%
TATATCAGCCATATCGAAAG+TGG + chr2_3:51657544-51657563 None:intergenic 35.0%
!!! TTCTTACAGGTGGTTTTATG+AGG - chr2_3:51657705-51657724 Msa0297860:CDS 35.0%
!!! AGGTTTTGTCGAGTTGATTT+AGG - chr2_3:51657725-51657744 Msa0297860:CDS 35.0%
AACACTTCTACTCTAATGGA+TGG + chr2_3:51657795-51657814 None:intergenic 35.0%
!!! TGTTTTTTTGGCTTTCCAGA+TGG - chr2_3:51657950-51657969 Msa0297860:CDS 35.0%
!!! GTTTTTTTGGCTTTCCAGAT+GGG - chr2_3:51657951-51657970 Msa0297860:CDS 35.0%
! ACCTTTTCCAAAAATTCTGG+TGG + chr2_3:51658028-51658047 None:intergenic 35.0%
! CTGACCTTTTCCAAAAATTC+TGG + chr2_3:51658031-51658050 None:intergenic 35.0%
!! GAATTTTTGGAAAAGGTCAG+AGG - chr2_3:51658031-51658050 Msa0297860:intron 35.0%
! AGAGTACCTTCTATGTTCTA+TGG + chr2_3:51658182-51658201 None:intergenic 35.0%
AAGCTACTTGTCATCTTAAC+TGG + chr2_3:51658253-51658272 None:intergenic 35.0%
GAGACAACATTAATGTGTCA+AGG - chr2_3:51658278-51658297 Msa0297860:intron 35.0%
TAATGTGTCAAGGAAGAGAA+TGG - chr2_3:51658288-51658307 Msa0297860:intron 35.0%
GGGGAGAATTTAAATACCAA+TGG + chr2_3:51658342-51658361 None:intergenic 35.0%
ATACACCAAATAACAAGAGG+GGG + chr2_3:51658361-51658380 None:intergenic 35.0%
CATACACCAAATAACAAGAG+GGG + chr2_3:51658362-51658381 None:intergenic 35.0%
GCATACACCAAATAACAAGA+GGG + chr2_3:51658363-51658382 None:intergenic 35.0%
AGCATACACCAAATAACAAG+AGG + chr2_3:51658364-51658383 None:intergenic 35.0%
AGGTGGGATTATTCAAATTC+AGG - chr2_3:51658559-51658578 Msa0297860:intron 35.0%
GGAACTTAGATGAGTTAATC+AGG + chr2_3:51658641-51658660 None:intergenic 35.0%
AGCAAAAGGGATGTTTATGT+TGG + chr2_3:51659120-51659139 None:intergenic 35.0%
! AACATAAACATCCCTTTTGC+TGG - chr2_3:51659119-51659138 Msa0297860:intron 35.0%
!! CTTTTGTATTTTGAGAGGGA+TGG + chr2_3:51659161-51659180 None:intergenic 35.0%
CATCCCTCTCAAAATACAAA+AGG - chr2_3:51659159-51659178 Msa0297860:intron 35.0%
GAGGATGAGATTTCATTTCT+TGG - chr2_3:51659263-51659282 Msa0297860:intron 35.0%
ATATACTTCACAGCAACAGT+TGG + chr2_3:51659434-51659453 None:intergenic 35.0%
TGTGAAGTATATACTAGACC+AGG - chr2_3:51659442-51659461 Msa0297860:intron 35.0%
!! AGTTGATTTGCTTTCAATGC+AGG - chr2_3:51659468-51659487 Msa0297860:CDS 35.0%
! CTTAAAGTGATTGGTGATTG+TGG - chr2_3:51659830-51659849 Msa0297860:CDS 35.0%
TTCTCAAAAATCCATGGCAG+TGG - chr2_3:51655446-51655465 Msa0297860:CDS 40.0%
TGAAAGTGGAGAATAGGTTG+TGG + chr2_3:51655482-51655501 None:intergenic 40.0%
! TTGATTCGAATTCGATGCAG+TGG - chr2_3:51655561-51655580 Msa0297860:intron 40.0%
! GAGTAACGGAAACGATTCAT+TGG - chr2_3:51655638-51655657 Msa0297860:intron 40.0%
! ACAGAGAAAATGAGTGGACT+AGG + chr2_3:51655804-51655823 None:intergenic 40.0%
! TCTGTTCTATGATGATGTGG+AGG - chr2_3:51655840-51655859 Msa0297860:CDS 40.0%
!!! TTTTCTCTTTGATGACGTGG+AGG - chr2_3:51655879-51655898 Msa0297860:CDS 40.0%
ATGTCAAACCAGTTTGAGTC+GGG - chr2_3:51656140-51656159 Msa0297860:CDS 40.0%
AATTTAGTCCCGACTCAAAC+TGG + chr2_3:51656151-51656170 None:intergenic 40.0%
AGTTTGAGTCGGGACTAAAT+TGG - chr2_3:51656150-51656169 Msa0297860:CDS 40.0%
GTTTGAGTCGGGACTAAATT+GGG - chr2_3:51656151-51656170 Msa0297860:CDS 40.0%
CTAAACTAGAGTGTACAAGC+TGG + chr2_3:51656343-51656362 None:intergenic 40.0%
ATCATGCGAACAAAACTCCA+GGG + chr2_3:51656755-51656774 None:intergenic 40.0%
CAACAGCAGAAACTCTTGAA+AGG + chr2_3:51657215-51657234 None:intergenic 40.0%
CTTGTTGCAATTCCTCTTGT+TGG + chr2_3:51657324-51657343 None:intergenic 40.0%
! CAGTAATGGGAAGGATTCAT+TGG - chr2_3:51657410-51657429 Msa0297860:intron 40.0%
! GATATAACTCGGGTTGTGAA+TGG - chr2_3:51657432-51657451 Msa0297860:intron 40.0%
ATGCTTAAATACGCTGATGC+TGG - chr2_3:51657513-51657532 Msa0297860:intron 40.0%
GACATGAGCCTAATTCTTAC+AGG - chr2_3:51657692-51657711 Msa0297860:CDS 40.0%
ATGAGCCTAATTCTTACAGG+TGG - chr2_3:51657695-51657714 Msa0297860:CDS 40.0%
ATCCCATATAGATCTTCAGC+TGG + chr2_3:51657977-51657996 None:intergenic 40.0%
!! GCCACCAGAATTTTTGGAAA+AGG - chr2_3:51658024-51658043 Msa0297860:intron 40.0%
TTTGATGCAGTCTCACTAAG+TGG - chr2_3:51658218-51658237 Msa0297860:intron 40.0%
TTGATGCAGTCTCACTAAGT+GGG - chr2_3:51658219-51658238 Msa0297860:intron 40.0%
CTACTTGTCATCTTAACTGG+TGG + chr2_3:51658250-51658269 None:intergenic 40.0%
ATGGAACTGAAGCATATCCA+AGG + chr2_3:51658323-51658342 None:intergenic 40.0%
TGGATATGCTTCAGTTCCAT+TGG - chr2_3:51658323-51658342 Msa0297860:intron 40.0%
!! ATTCTCCCCCTCTTGTTATT+TGG - chr2_3:51658353-51658372 Msa0297860:intron 40.0%
!!! TGAGGTGTTTTAGTGCATCA+AGG + chr2_3:51658588-51658607 None:intergenic 40.0%
AAACACCTCACAGACTTGAA+AGG - chr2_3:51658598-51658617 Msa0297860:intron 40.0%
TCTACCTGATTGCTCACAAT+GGG + chr2_3:51658778-51658797 None:intergenic 40.0%
!!! AAGCTCTGCCATTTTCTGTT+GGG + chr2_3:51658912-51658931 None:intergenic 40.0%
!!! AAAGCTCTGCCATTTTCTGT+TGG + chr2_3:51658913-51658932 None:intergenic 40.0%
! TCACAATAGGGGGGAAATTT+TGG + chr2_3:51659045-51659064 None:intergenic 40.0%
!! GGATGTTTATGTTGGTGTCA+AGG + chr2_3:51659112-51659131 None:intergenic 40.0%
TAATTGCAGGTCCAGCAAAA+GGG + chr2_3:51659133-51659152 None:intergenic 40.0%
TTAATTGCAGGTCCAGCAAA+AGG + chr2_3:51659134-51659153 None:intergenic 40.0%
TAGTGTTCTTAAGCGGGAAA+AGG + chr2_3:51659242-51659261 None:intergenic 40.0%
! TTTTCCCGCTTAAGAACACT+AGG - chr2_3:51659241-51659260 Msa0297860:intron 40.0%
ATCCTCCTAGTGTTCTTAAG+CGG + chr2_3:51659249-51659268 None:intergenic 40.0%
TTGCTGTACTTTGCATCACA+TGG - chr2_3:51659318-51659337 Msa0297860:intron 40.0%
TAAGAGTTCGAAGAAGTCCT+TGG + chr2_3:51659379-51659398 None:intergenic 40.0%
GAAAGCAAATCAACTTCACC+TGG + chr2_3:51659463-51659482 None:intergenic 40.0%
TTAAATTGGACAAGCCCTGT+TGG - chr2_3:51659530-51659549 Msa0297860:CDS 40.0%
! TCAATGGTTGGTGTAAGACT+TGG - chr2_3:51659604-51659623 Msa0297860:CDS 40.0%
AGCGAGTGAAAGTGGAGAAT+AGG + chr2_3:51655488-51655507 None:intergenic 45.0%
GTTGTTGAAGCGAGTGAAAG+TGG + chr2_3:51655496-51655515 None:intergenic 45.0%
TCGAATCAATCTTGCGCTGT+TGG + chr2_3:51655550-51655569 None:intergenic 45.0%
CAGCGAGTGAAACTGAGTAA+CGG - chr2_3:51655624-51655643 Msa0297860:intron 45.0%
AATGGAATGTGGCAGACAAG+TGG - chr2_3:51655678-51655697 Msa0297860:intron 45.0%
ATACCGGAGCATAGCTTCAA+CGG + chr2_3:51655733-51655752 None:intergenic 45.0%
ATAAGCCGGAATCAGCATAC+CGG + chr2_3:51655749-51655768 None:intergenic 45.0%
CATGTCGAAGGTAGATAAGC+CGG + chr2_3:51655763-51655782 None:intergenic 45.0%
ACATTAACCAATGTGACCGG+AGG - chr2_3:51656022-51656041 Msa0297860:intron 45.0%
CATTAACCAATGTGACCGGA+GGG - chr2_3:51656023-51656042 Msa0297860:intron 45.0%
AGTCATCAATCTACTCCCTC+CGG + chr2_3:51656041-51656060 None:intergenic 45.0%
TCATCGGACCCAACTAAGTT+GGG + chr2_3:51656096-51656115 None:intergenic 45.0%
TTCATCGGACCCAACTAAGT+TGG + chr2_3:51656097-51656116 None:intergenic 45.0%
ACAAGCTGGAATAGCTCAGT+TGG + chr2_3:51656329-51656348 None:intergenic 45.0%
GATCATGCGAACAAAACTCC+AGG + chr2_3:51656756-51656775 None:intergenic 45.0%
TCGAACAGAACACCAACAAG+AGG - chr2_3:51657309-51657328 Msa0297860:intron 45.0%
TGACTACCCAGGAGGATAAT+CGG - chr2_3:51657376-51657395 Msa0297860:intron 45.0%
! CATTGTGGTCAGTAATGGGA+AGG - chr2_3:51657401-51657420 Msa0297860:intron 45.0%
AATGGAATGTGGCAAACGAG+TGG - chr2_3:51657450-51657469 Msa0297860:intron 45.0%
AGGTGCAAGTAGAAGCAACA+AGG + chr2_3:51657580-51657599 None:intergenic 45.0%
GGCAGCAGAGTCTTAGAATT+CGG + chr2_3:51657756-51657775 None:intergenic 45.0%
GAGACTGTTCTCATTTGAGC+AGG - chr2_3:51657817-51657836 Msa0297860:CDS 45.0%
GGCCAGCTGAAGATCTATAT+GGG - chr2_3:51657972-51657991 Msa0297860:CDS 45.0%
CTTGTCATCTTAACTGGTGG+TGG + chr2_3:51658247-51658266 None:intergenic 45.0%
CGATGAATGACCGTGTTATG+AGG + chr2_3:51658402-51658421 None:intergenic 45.0%
! CTTCTCCTTTCAAGTCTGTG+AGG + chr2_3:51658606-51658625 None:intergenic 45.0%
CTCACAGACTTGAAAGGAGA+AGG - chr2_3:51658604-51658623 Msa0297860:intron 45.0%
GATTCCCATTGTGAGCAATC+AGG - chr2_3:51658771-51658790 Msa0297860:intron 45.0%
GTCTACCTGATTGCTCACAA+TGG + chr2_3:51658779-51658798 None:intergenic 45.0%
!!! AGCTCTGCCATTTTCTGTTG+GGG + chr2_3:51658911-51658930 None:intergenic 45.0%
ATACCTGCATCACAATAGGG+GGG + chr2_3:51659054-51659073 None:intergenic 45.0%
CATACCTGCATCACAATAGG+GGG + chr2_3:51659055-51659074 None:intergenic 45.0%
CCATACCTGCATCACAATAG+GGG + chr2_3:51659056-51659075 None:intergenic 45.0%
CCCATACCTGCATCACAATA+GGG + chr2_3:51659057-51659076 None:intergenic 45.0%
CCCTATTGTGATGCAGGTAT+GGG - chr2_3:51659054-51659073 Msa0297860:intron 45.0%
TCCCATACCTGCATCACAAT+AGG + chr2_3:51659058-51659077 None:intergenic 45.0%
ATGCAGGTATGGGACAGTAA+TGG - chr2_3:51659064-51659083 Msa0297860:intron 45.0%
TGCAGGTATGGGACAGTAAT+GGG - chr2_3:51659065-51659084 Msa0297860:intron 45.0%
! AGGGATGGAGTGTTAATTGC+AGG + chr2_3:51659146-51659165 None:intergenic 45.0%
TCCTCCTAGTGTTCTTAAGC+GGG + chr2_3:51659248-51659267 None:intergenic 45.0%
ACTTTGCATCACATGGCAGA+TGG - chr2_3:51659325-51659344 Msa0297860:intron 45.0%
GTGATTGTGGAGATGAGTAC+AGG - chr2_3:51659843-51659862 Msa0297860:CDS 45.0%
!! TAACATAAAAATTAAATAAT+TGG + chr2_3:51656778-51656797 None:intergenic 5.0%
!!! TAAAAAATAACATTTTTTTA+GGG + chr2_3:51656815-51656834 None:intergenic 5.0%
!!! ATAAAAAATAACATTTTTTT+AGG + chr2_3:51656816-51656835 None:intergenic 5.0%
GCTTGAAGATACCACTGCCA+TGG + chr2_3:51655460-51655479 None:intergenic 50.0%
!! CTGTTGGTTCTCTGTGAGTG+GGG + chr2_3:51655534-51655553 None:intergenic 50.0%
!! GCTGTTGGTTCTCTGTGAGT+GGG + chr2_3:51655535-51655554 None:intergenic 50.0%
!! ATGCTCCGGTATGCTGATTC+CGG - chr2_3:51655741-51655760 Msa0297860:intron 50.0%
CGGCTTATCTACCTTCGACA+TGG - chr2_3:51655761-51655780 Msa0297860:intron 50.0%
ACAGTGATCAGCCATGTCGA+AGG + chr2_3:51655775-51655794 None:intergenic 50.0%
GTGGCTGTTAACCACAAGGT+CGG + chr2_3:51656297-51656316 None:intergenic 50.0%
! TCAAGTTGCCCTATCCTGTG+CGG + chr2_3:51657172-51657191 None:intergenic 50.0%
TGGGTAGTCACACACTGACA+TGG + chr2_3:51657366-51657385 None:intergenic 50.0%
ATGTCAGTGTGTGACTACCC+AGG - chr2_3:51657365-51657384 Msa0297860:intron 50.0%
!! AATGCGCCGATTATCCTCCT+GGG + chr2_3:51657385-51657404 None:intergenic 50.0%
GGCGCATTGTGGTCAGTAAT+GGG - chr2_3:51657397-51657416 Msa0297860:intron 50.0%
! CTCGGGTTGTGAATGGAATG+TGG - chr2_3:51657439-51657458 Msa0297860:intron 50.0%
CGGATGGGGCAGAATTGATA+GGG - chr2_3:51657473-51657492 Msa0297860:intron 50.0%
GGGCAGAATTGATAGGGATG+AGG - chr2_3:51657479-51657498 Msa0297860:intron 50.0%
GGGCCAGCTGAAGATCTATA+TGG - chr2_3:51657971-51657990 Msa0297860:CDS 50.0%
TCAATCGAGTTCGTCGTGAG+CGG - chr2_3:51658002-51658021 Msa0297860:CDS 50.0%
! TGAGCGGCCACCAGAATTTT+TGG - chr2_3:51658018-51658037 Msa0297860:intron 50.0%
GTCAAGGAAGAGAATGGACG+TGG - chr2_3:51658294-51658313 Msa0297860:intron 50.0%
GAGAATGGACGTGGAATCCT+TGG - chr2_3:51658303-51658322 Msa0297860:intron 50.0%
TATGCGCCCCCAACAGAAAA+TGG - chr2_3:51658901-51658920 Msa0297860:intron 50.0%
!!! GCTCTGCCATTTTCTGTTGG+GGG + chr2_3:51658910-51658929 None:intergenic 50.0%
! GCAGAGCTTTGTCAGCTTAC+AGG - chr2_3:51658923-51658942 Msa0297860:intron 50.0%
TTTCCCCCCTATTGTGATGC+AGG - chr2_3:51659048-51659067 Msa0297860:intron 50.0%
CCCCTATTGTGATGCAGGTA+TGG - chr2_3:51659053-51659072 Msa0297860:intron 50.0%
! AGGTATGGGACAGTAATGGG+TGG - chr2_3:51659068-51659087 Msa0297860:intron 50.0%
TCCCGCTTAAGAACACTAGG+AGG - chr2_3:51659244-51659263 Msa0297860:intron 50.0%
TTGCATCACATGGCAGATGG+TGG - chr2_3:51659328-51659347 Msa0297860:intron 50.0%
!! ATGGCAGATGGTGGATGCTT+GGG - chr2_3:51659337-51659356 Msa0297860:intron 50.0%
ACCATTGATCCTGCTACAGC+AGG + chr2_3:51659592-51659611 None:intergenic 50.0%
GCTGTAGCAGGATCAATGGT+TGG - chr2_3:51659592-51659611 Msa0297860:CDS 50.0%
AACAGCATAAGGGAAGCAGC+AGG - chr2_3:51659791-51659810 Msa0297860:CDS 50.0%
ACAGCATAAGGGAAGCAGCA+GGG - chr2_3:51659792-51659811 Msa0297860:CDS 50.0%
ATAAGGGAAGCAGCAGGGAA+AGG - chr2_3:51659797-51659816 Msa0297860:CDS 50.0%
GGTTCTCTGTGAGTGGGGAT+TGG + chr2_3:51655529-51655548 None:intergenic 55.0%
!! CGCTGTTGGTTCTCTGTGAG+TGG + chr2_3:51655536-51655555 None:intergenic 55.0%
GGAATGTGGCAGACAAGTGG+TGG - chr2_3:51655681-51655700 Msa0297860:intron 55.0%
TGTGGCAGACAAGTGGTGGT+TGG - chr2_3:51655685-51655704 Msa0297860:intron 55.0%
GTGGCAGACAAGTGGTGGTT+GGG - chr2_3:51655686-51655705 Msa0297860:intron 55.0%
TGGCAGACAAGTGGTGGTTG+GGG - chr2_3:51655687-51655706 Msa0297860:intron 55.0%
ACGCCGTTGAAGCTATGCTC+CGG - chr2_3:51655727-51655746 Msa0297860:intron 55.0%
TCTACTCCCTCCGGTCACAT+TGG + chr2_3:51656032-51656051 None:intergenic 55.0%
GCTGTTAACCACAAGGTCGG+AGG + chr2_3:51656294-51656313 None:intergenic 55.0%
GCGTGTGGCTGTTAACCACA+AGG + chr2_3:51656301-51656320 None:intergenic 55.0%
GCTCAGTTGGTTAGAGCGTG+TGG + chr2_3:51656316-51656335 None:intergenic 55.0%
TGGTGAGCACTTCTGTACCC+TGG - chr2_3:51656735-51656754 Msa0297860:intron 55.0%
AGAGTAGCCCGCACAGGATA+GGG - chr2_3:51657161-51657180 Msa0297860:intron 55.0%
CAAGTTGCCCTATCCTGTGC+GGG + chr2_3:51657171-51657190 None:intergenic 55.0%
TCAGTGTGTGACTACCCAGG+AGG - chr2_3:51657368-51657387 Msa0297860:intron 55.0%
!! CAATGCGCCGATTATCCTCC+TGG + chr2_3:51657386-51657405 None:intergenic 55.0%
GGAGGATAATCGGCGCATTG+TGG - chr2_3:51657386-51657405 Msa0297860:intron 55.0%
CGGCGCATTGTGGTCAGTAA+TGG - chr2_3:51657396-51657415 Msa0297860:intron 55.0%
GGAATGTGGCAAACGAGTGG+CGG - chr2_3:51657453-51657472 Msa0297860:intron 55.0%
GCGGATGGGGCAGAATTGAT+AGG - chr2_3:51657472-51657491 Msa0297860:intron 55.0%
AGATCTTCAGCTGGCCCATC+TGG + chr2_3:51657968-51657987 None:intergenic 55.0%
!! CATGGCAGATGGTGGATGCT+TGG - chr2_3:51659336-51659355 Msa0297860:intron 55.0%
!! TGGCAGATGGTGGATGCTTG+GGG - chr2_3:51659338-51659357 Msa0297860:intron 55.0%
! GGAGGATGGGGTTTGTTCCA+AGG - chr2_3:51659359-51659378 Msa0297860:intron 55.0%
GCCTGCTGTAGCAGGATCAA+TGG - chr2_3:51659588-51659607 Msa0297860:CDS 55.0%
GGCAGACAAGTGGTGGTTGG+GGG - chr2_3:51655688-51655707 Msa0297860:intron 60.0%
AGACAAGTGGTGGTTGGGGG+AGG - chr2_3:51655691-51655710 Msa0297860:intron 60.0%
GGGTTGAACCTCCGACCTTG+TGG - chr2_3:51656283-51656302 Msa0297860:intron 60.0%
GAGAGTAGCCCGCACAGGAT+AGG - chr2_3:51657160-51657179 Msa0297860:intron 60.0%
! TGTGGCAAACGAGTGGCGGA+TGG - chr2_3:51657457-51657476 Msa0297860:intron 60.0%
!! GTGGCAAACGAGTGGCGGAT+GGG - chr2_3:51657458-51657477 Msa0297860:intron 60.0%
!! TGGCAAACGAGTGGCGGATG+GGG - chr2_3:51657459-51657478 Msa0297860:intron 60.0%
!! CAGATGGTGGATGCTTGGGG+AGG - chr2_3:51659341-51659360 Msa0297860:intron 60.0%
! TGGTGGATGCTTGGGGAGGA+TGG - chr2_3:51659345-51659364 Msa0297860:intron 60.0%
GGTGGATGCTTGGGGAGGAT+GGG - chr2_3:51659346-51659365 Msa0297860:intron 60.0%
GTGGATGCTTGGGGAGGATG+GGG - chr2_3:51659347-51659366 Msa0297860:intron 60.0%
AACCTGCAGCCTGCTGTAGC+AGG - chr2_3:51659580-51659599 Msa0297860:CDS 60.0%
ATCCTGCTACAGCAGGCTGC+AGG + chr2_3:51659585-51659604 None:intergenic 60.0%
GGAAGCAGCAGGGAAAGGCA+AGG - chr2_3:51659802-51659821 Msa0297860:CDS 60.0%
TGGTGGAGAGTAGCCCGCAC+AGG - chr2_3:51657155-51657174 Msa0297860:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 51655381 51659874 51655381 ID=Msa0297860;Name=Msa0297860
chr2_3 mRNA 51655381 51659874 51655381 ID=Msa0297860-mRNA-1;Parent=Msa0297860;Name=Msa0297860-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.8|0.63|1|0.9|0.81|11|0|526
chr2_3 exon 51659459 51659874 51659459 ID=Msa0297860-mRNA-1:exon:16445;Parent=Msa0297860-mRNA-1
chr2_3 exon 51657691 51658034 51657691 ID=Msa0297860-mRNA-1:exon:16444;Parent=Msa0297860-mRNA-1
chr2_3 exon 51657202 51657286 51657202 ID=Msa0297860-mRNA-1:exon:16443;Parent=Msa0297860-mRNA-1
chr2_3 exon 51656911 51657027 51656911 ID=Msa0297860-mRNA-1:exon:16442;Parent=Msa0297860-mRNA-1
chr2_3 exon 51656630 51656694 51656630 ID=Msa0297860-mRNA-1:exon:16441;Parent=Msa0297860-mRNA-1
chr2_3 exon 51656463 51656551 51656463 ID=Msa0297860-mRNA-1:exon:16440;Parent=Msa0297860-mRNA-1
chr2_3 exon 51656295 51656374 51656295 ID=Msa0297860-mRNA-1:exon:16439;Parent=Msa0297860-mRNA-1
chr2_3 exon 51656074 51656185 51656074 ID=Msa0297860-mRNA-1:exon:16438;Parent=Msa0297860-mRNA-1
chr2_3 exon 51655792 51655911 51655792 ID=Msa0297860-mRNA-1:exon:16437;Parent=Msa0297860-mRNA-1
chr2_3 exon 51655642 51655666 51655642 ID=Msa0297860-mRNA-1:exon:16436;Parent=Msa0297860-mRNA-1
chr2_3 exon 51655381 51655508 51655381 ID=Msa0297860-mRNA-1:exon:16435;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51659459 51659874 51659459 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51657691 51658034 51657691 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51657202 51657286 51657202 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51656911 51657027 51656911 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51656630 51656694 51656630 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51656463 51656551 51656463 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51656295 51656374 51656295 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51656074 51656185 51656074 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51655792 51655911 51655792 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51655642 51655666 51655642 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
chr2_3 CDS 51655381 51655508 51655381 ID=Msa0297860-mRNA-1:cds;Parent=Msa0297860-mRNA-1
Gene Sequence

>Msa0297860

CTGAACAAACCAACTAAAACATTTCCAATTTCAATTCTCCAATTTGGTTCGTTATCCTCTTCTTCTTCTCAAAAATCCATGGCAGTGGTATCTTCAAGCCACAACCTATTCTCCACTTTCACTCGCTTCAACAACTCATCAAGAACCAATCCCCACTCACAGAGAACCAACAGCGCAAGATTGATTCGAATTCGATGCAGTGGTGATTTGAGCACATGTGCTACAAACACAGTTGAGAATCAGCAGCGAGTGAAACTGAGTAACGGAAACGATTCATTGGAAATATGTAGAGTTCTTAATGGAATGTGGCAGACAAGTGGTGGTTGGGGGAGGATTGATAGAGACGACGCCGTTGAAGCTATGCTCCGGTATGCTGATTCCGGCTTATCTACCTTCGACATGGCTGATCACTGTATAGTTTCTGCTGTTGCTAAAGCTACTTTTCACACTTTGAAAATGGCTGAGTTATTACAGCATTCTTTGAGCAAATTCGCTTATTACAGTTCGAACAGAACACCAACAAGAGGAATTGCAACAAGAGAATATAAGCATTTGAGACCATGTCAGTGTGTGACTACCCAGGAGGATAATCGGCGCATTGTGGTCAGTAATGGGAAGGATTCATTGGATATAACTCGGGTTGTGAATGGAATGTGGCAAACGAGTGGCGGATGGGGCAGAATTGATAGGGATGAGGCTGTTGATTCTATGCTTAAATACGCTGATGCTGGATTAACCACTTTCGATATGGCTGATATATATGGGCCAGCTGAAGATCTATATGGGATTTTCATCAATCGAGTTCGTCGTGAGCGGCCACCAGAATTTTTGGAAAAGGTCAGAGGTCTCACTAAGTGGGTGCCACCACCAGTTAAGATGACAAGTAGCTTTGTAAGAGACAACATTAATGTGTCAAGGAAGAGAATGGACGTGGAATCCTTGGATATGCTTCAGTTCCATTGGTGGGATTATTCAAATTCAGGATACCTTGATGCACTAAAACACCTCACAGACTTGAAAGGAGAAGGTAAAATCAAAACTATAGCTCTAACAAATTTTGATACTGAGAGGTTACAAATTATTCTTGAAAATGAGATTCCCATTGTGAGCAATCAGGTACAACATTCACTTGTTGATATGCGCCCCCAACAGAAAATGGCAGAGCTTTGTCAGCTTACAGGAGTCAAACTGATAACGTATGGGACAGTAATGGGTGGTCTGTTGTCTGAGAAGTTCCTTGACACCAACATAAACATCCCTTTTGCTGGACCTGCAATTAACACTCCATCCCTCTCAAAATACAAAAGGATGGTGGATGCTTGGGGAGGATGGGGTTTGTTCCAAGGACTTCTTCGAACTCTTAAACAAGTATCTACTAAGCATGGCGTTTCAATTCCAACTGTTGCTGTGAAGTATATACTAGACCAGCCTGCTGTAGCAGGATCAATGGTTGACTGCAATGCTATCTTTTCACTTGTTCTTGATGAAGAAGATGTAAACAGCATAAGGGAAGCAGCAGGGAAAGGCAAGGATCTTCTTAAAGTGATTGGTGATTGTGGAGATGAGTACAGGCGTGCATGA

Protein sequence

>Msa0297860

LNKPTKTFPISILQFGSLSSSSSQKSMAVVSSSHNLFSTFTRFNNSSRTNPHSQRTNSARLIRIRCSGDLSTCATNTVENQQRVKLSNGNDSLEICRVLNGMWQTSGGWGRIDRDDAVEAMLRYADSGLSTFDMADHCIVSAVAKATFHTLKMAELLQHSLSKFAYYSSNRTPTRGIATREYKHLRPCQCVTTQEDNRRIVVSNGKDSLDITRVVNGMWQTSGGWGRIDRDEAVDSMLKYADAGLTTFDMADIYGPAEDLYGIFINRVRRERPPEFLEKVRGLTKWVPPPVKMTSSFVRDNINVSRKRMDVESLDMLQFHWWDYSNSGYLDALKHLTDLKGEGKIKTIALTNFDTERLQIILENEIPIVSNQVQHSLVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNINIPFAGPAINTPSLSKYKRMVDAWGGWGLFQGLLRTLKQVSTKHGVSIPTVAVKYILDQPAVAGSMVDCNAIFSLVLDEEDVNSIREAAGKGKDLLKVIGDCGDEYRRA*