Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299900 | XP_013445560.1 | 97.340 | 188 | 5 | 0 | 2 | 189 | 197 | 384 | 5.82e-120 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299900 | sp|Q2QY07|CCDA2_ORYSJ | 84.783 | 184 | 28 | 0 | 6 | 189 | 179 | 362 | 2.49e-109 | 319 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299900 | A0A072TQT5 | 97.340 | 188 | 5 | 0 | 2 | 189 | 197 | 384 | 2.78e-120 | 355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa1299900 | 0.801528 | 8.631589e-49 | -8.615850e-47 |
| Msa0005160 | Msa1299900 | 0.866437 | 2.853919e-65 | -8.615850e-47 |
| Msa0033930 | Msa1299900 | 0.839712 | 1.344768e-57 | -8.615850e-47 |
| Msa0043070 | Msa1299900 | 0.805852 | 1.092988e-49 | -8.615850e-47 |
| Msa0047470 | Msa1299900 | 0.815436 | 9.251910e-52 | -8.615850e-47 |
| Msa0053960 | Msa1299900 | 0.828259 | 9.931163e-55 | -8.615850e-47 |
| Msa0055530 | Msa1299900 | 0.811133 | 8.153197e-51 | -8.615850e-47 |
| Msa0063850 | Msa1299900 | 0.805098 | 1.572357e-49 | -8.615850e-47 |
| Msa0083160 | Msa1299900 | 0.806526 | 7.883174e-50 | -8.615850e-47 |
| Msa0098700 | Msa1299900 | 0.837170 | 6.085533e-57 | -8.615850e-47 |
| Msa0107460 | Msa1299900 | 0.804856 | 1.767192e-49 | -8.615850e-47 |
| Msa0116950 | Msa1299900 | 0.804104 | 2.535312e-49 | -8.615850e-47 |
| Msa0606680 | Msa1299900 | 0.848981 | 4.334690e-60 | -8.615850e-47 |
| Msa0615850 | Msa1299900 | 0.826558 | 2.540325e-54 | -8.615850e-47 |
| Msa0618260 | Msa1299900 | 0.815515 | 8.888889e-52 | -8.615850e-47 |
| Msa0623270 | Msa1299900 | 0.801094 | 1.058746e-48 | -8.615850e-47 |
| Msa0635130 | Msa1299900 | 0.806644 | 7.442055e-50 | -8.615850e-47 |
| Msa0635990 | Msa1299900 | 0.804343 | 2.260553e-49 | -8.615850e-47 |
| Msa0638040 | Msa1299900 | 0.828678 | 7.867384e-55 | -8.615850e-47 |
| Msa0639030 | Msa1299900 | 0.802510 | 5.420994e-49 | -8.615850e-47 |
| Msa0646390 | Msa1299900 | 0.822857 | 1.892714e-53 | -8.615850e-47 |
| Msa0647710 | Msa1299900 | 0.823274 | 1.512948e-53 | -8.615850e-47 |
| Msa0649310 | Msa1299900 | 0.830339 | 3.104474e-55 | -8.615850e-47 |
| Msa0657300 | Msa1299900 | 0.820676 | 6.047231e-53 | -8.615850e-47 |
| Msa0675250 | Msa1299900 | 0.808051 | 3.744220e-50 | -8.615850e-47 |
| Msa0679780 | Msa1299900 | 0.830119 | 3.514128e-55 | -8.615850e-47 |
| Msa0688760 | Msa1299900 | 0.810215 | 1.287986e-50 | -8.615850e-47 |
| Msa0690530 | Msa1299900 | 0.832549 | 8.873566e-56 | -8.615850e-47 |
| Msa0693400 | Msa1299900 | 0.802339 | 5.878698e-49 | -8.615850e-47 |
| Msa0697600 | Msa1299900 | 0.811697 | 6.150933e-51 | -8.615850e-47 |
| Msa0698900 | Msa1299900 | 0.836195 | 1.078572e-56 | -8.615850e-47 |
| Msa0713420 | Msa1299900 | 0.801859 | 7.381715e-49 | -8.615850e-47 |
| Msa0715510 | Msa1299900 | -0.804332 | 2.273276e-49 | -8.615850e-47 |
| Msa0719340 | Msa1299900 | 0.825768 | 3.914560e-54 | -8.615850e-47 |
| Msa0729380 | Msa1299900 | 0.811620 | 6.392624e-51 | -8.615850e-47 |
| Msa0747900 | Msa1299900 | 0.851964 | 6.297867e-61 | -8.615850e-47 |
| Msa0749900 | Msa1299900 | 0.801725 | 7.864073e-49 | -8.615850e-47 |
| Msa0752830 | Msa1299900 | 0.802817 | 4.684890e-49 | -8.615850e-47 |
| Msa0772150 | Msa1299900 | 0.802619 | 5.148947e-49 | -8.615850e-47 |
| Msa0773260 | Msa1299900 | 0.807414 | 5.113841e-50 | -8.615850e-47 |
| Msa0813630 | Msa1299900 | 0.820195 | 7.799417e-53 | -8.615850e-47 |
| Msa0817100 | Msa1299900 | -0.804764 | 1.846727e-49 | -8.615850e-47 |
| Msa0830120 | Msa1299900 | 0.806986 | 6.299933e-50 | -8.615850e-47 |
| Msa0830450 | Msa1299900 | 0.807457 | 5.006891e-50 | -8.615850e-47 |
| Msa0835550 | Msa1299900 | 0.800580 | 1.348434e-48 | -8.615850e-47 |
| Msa0842270 | Msa1299900 | 0.802475 | 5.512700e-49 | -8.615850e-47 |
| Msa0131090 | Msa1299900 | 0.804468 | 2.129544e-49 | -8.615850e-47 |
| Msa0137010 | Msa1299900 | 0.811249 | 7.694621e-51 | -8.615850e-47 |
| Msa0160470 | Msa1299900 | 0.817216 | 3.699227e-52 | -8.615850e-47 |
| Msa0163300 | Msa1299900 | 0.803096 | 4.103408e-49 | -8.615850e-47 |
| Msa0164630 | Msa1299900 | 0.813680 | 2.264372e-51 | -8.615850e-47 |
| Msa0173280 | Msa1299900 | 0.814549 | 1.455636e-51 | -8.615850e-47 |
| Msa0175530 | Msa1299900 | 0.807525 | 4.844566e-50 | -8.615850e-47 |
| Msa0184120 | Msa1299900 | 0.800552 | 1.366462e-48 | -8.615850e-47 |
| Msa0184850 | Msa1299900 | 0.817740 | 2.819115e-52 | -8.615850e-47 |
| Msa0185950 | Msa1299900 | 0.811474 | 6.875849e-51 | -8.615850e-47 |
| Msa0188500 | Msa1299900 | 0.802010 | 6.870556e-49 | -8.615850e-47 |
| Msa0190000 | Msa1299900 | 0.817507 | 3.180847e-52 | -8.615850e-47 |
| Msa0192020 | Msa1299900 | 0.801224 | 9.958106e-49 | -8.615850e-47 |
| Msa0192710 | Msa1299900 | 0.801149 | 1.031812e-48 | -8.615850e-47 |
| Msa0197730 | Msa1299900 | 0.850833 | 1.314899e-60 | -8.615850e-47 |
| Msa0218860 | Msa1299900 | 0.845528 | 3.839836e-59 | -8.615850e-47 |
| Msa0227960 | Msa1299900 | 0.805803 | 1.118983e-49 | -8.615850e-47 |
| Msa0230980 | Msa1299900 | 0.815963 | 7.061926e-52 | -8.615850e-47 |
| Msa1226600 | Msa1299900 | 0.804753 | 1.857027e-49 | -8.615850e-47 |
| Msa1238370 | Msa1299900 | 0.843268 | 1.555705e-58 | -8.615850e-47 |
| Msa1246420 | Msa1299900 | 0.812713 | 3.691093e-51 | -8.615850e-47 |
| Msa1249410 | Msa1299900 | 0.814368 | 1.596554e-51 | -8.615850e-47 |
| Msa1266710 | Msa1299900 | -0.842151 | 3.079965e-58 | -8.615850e-47 |
| Msa1274310 | Msa1299900 | 0.820532 | 6.526882e-53 | -8.615850e-47 |
| Msa1280020 | Msa1299900 | 0.834964 | 2.210341e-56 | -8.615850e-47 |
| Msa1285870 | Msa1299900 | 0.804012 | 2.649493e-49 | -8.615850e-47 |
| Msa1291140 | Msa1299900 | 0.831576 | 1.543629e-55 | -8.615850e-47 |
| Msa1299900 | Msa1334020 | 0.826629 | 2.443143e-54 | -8.615850e-47 |
| Msa1299900 | Msa1334650 | 0.829488 | 5.005035e-55 | -8.615850e-47 |
| Msa1299900 | Msa1336080 | 0.800793 | 1.219997e-48 | -8.615850e-47 |
| Msa1299900 | Msa1341790 | 0.805251 | 1.461039e-49 | -8.615850e-47 |
| Msa1299900 | Msa1349360 | 0.804279 | 2.331903e-49 | -8.615850e-47 |
| Msa1299900 | Msa1349810 | 0.805260 | 1.454673e-49 | -8.615850e-47 |
| Msa1299900 | Msa1356730 | 0.812629 | 3.851145e-51 | -8.615850e-47 |
| Msa1299900 | Msa1359620 | 0.807930 | 3.974379e-50 | -8.615850e-47 |
| Msa1299900 | Msa1364420 | 0.830627 | 2.639407e-55 | -8.615850e-47 |
| Msa1299900 | Msa1365210 | 0.813041 | 3.129162e-51 | -8.615850e-47 |
| Msa1299900 | Msa1368660 | 0.814192 | 1.746105e-51 | -8.615850e-47 |
| Msa1299900 | Msa1376590 | 0.828673 | 7.889264e-55 | -8.615850e-47 |
| Msa1299900 | Msa1384980 | 0.816810 | 4.565153e-52 | -8.615850e-47 |
| Msa1299900 | Msa1388520 | 0.801029 | 1.091609e-48 | -8.615850e-47 |
| Msa1299900 | Msa1395580 | 0.828850 | 7.148012e-55 | -8.615850e-47 |
| Msa1299900 | Msa1403700 | 0.805078 | 1.587937e-49 | -8.615850e-47 |
| Msa1299900 | Msa1407210 | -0.810168 | 1.318258e-50 | -8.615850e-47 |
| Msa1299900 | Msa1408190 | 0.827543 | 1.475912e-54 | -8.615850e-47 |
| Msa1299900 | Msa1413900 | 0.801957 | 7.046586e-49 | -8.615850e-47 |
| Msa1299900 | Msa1426750 | 0.820870 | 5.456520e-53 | -8.615850e-47 |
| Msa1299900 | Msa1432350 | 0.807461 | 4.997895e-50 | -8.615850e-47 |
| Msa1299900 | Msa1435470 | 0.802443 | 5.597370e-49 | -8.615850e-47 |
| Msa1299900 | Msa1440180 | 0.810636 | 1.044780e-50 | -8.615850e-47 |
| Msa1299900 | Msa1440980 | 0.815802 | 7.669865e-52 | -8.615850e-47 |
| Msa1299900 | Msa1443550 | 0.803763 | 2.984519e-49 | -8.615850e-47 |
| Msa1299900 | Msa1448990 | 0.825654 | 4.166457e-54 | -8.615850e-47 |
| Msa1299900 | Msa1449740 | 0.810405 | 1.171470e-50 | -8.615850e-47 |
| Msa1299900 | Msa1451780 | 0.812846 | 3.451757e-51 | -8.615850e-47 |
| Msa1299900 | Msa1458920 | 0.825131 | 5.540775e-54 | -8.615850e-47 |
| Msa1299900 | Msa1459630 | 0.816904 | 4.347823e-52 | -8.615850e-47 |
| Msa1299900 | Msa1462600 | 0.845148 | 4.866732e-59 | -8.615850e-47 |
| Msa0372990 | Msa1299900 | 0.830864 | 2.309993e-55 | -8.615850e-47 |
| Msa0373130 | Msa1299900 | 0.808424 | 3.118592e-50 | -8.615850e-47 |
| Msa0373220 | Msa1299900 | 0.852486 | 4.471994e-61 | -8.615850e-47 |
| Msa0373950 | Msa1299900 | 0.865837 | 4.417970e-65 | -8.615850e-47 |
| Msa0376480 | Msa1299900 | 0.808917 | 2.446943e-50 | -8.615850e-47 |
| Msa0378700 | Msa1299900 | 0.806896 | 6.584710e-50 | -8.615850e-47 |
| Msa0379090 | Msa1299900 | 0.825696 | 4.072888e-54 | -8.615850e-47 |
| Msa0398850 | Msa1299900 | 0.801326 | 9.492714e-49 | -8.615850e-47 |
| Msa0413740 | Msa1299900 | 0.809878 | 1.522282e-50 | -8.615850e-47 |
| Msa0414990 | Msa1299900 | 0.838037 | 3.648846e-57 | -8.615850e-47 |
| Msa0417150 | Msa1299900 | 0.826555 | 2.544726e-54 | -8.615850e-47 |
| Msa0421720 | Msa1299900 | 0.806086 | 9.759327e-50 | -8.615850e-47 |
| Msa0431940 | Msa1299900 | 0.817072 | 3.984980e-52 | -8.615850e-47 |
| Msa0456480 | Msa1299900 | 0.814003 | 1.922255e-51 | -8.615850e-47 |
| Msa0458790 | Msa1299900 | 0.808308 | 3.301546e-50 | -8.615850e-47 |
| Msa0463140 | Msa1299900 | 0.803424 | 3.508627e-49 | -8.615850e-47 |
| Msa0463150 | Msa1299900 | 0.810970 | 8.844109e-51 | -8.615850e-47 |
| Msa0463540 | Msa1299900 | 0.848451 | 6.079274e-60 | -8.615850e-47 |
| Msa0464500 | Msa1299900 | 0.818034 | 2.420043e-52 | -8.615850e-47 |
| Msa0465640 | Msa1299900 | 0.822386 | 2.435694e-53 | -8.615850e-47 |
| Msa0467800 | Msa1299900 | 0.815515 | 8.887453e-52 | -8.615850e-47 |
| Msa0467880 | Msa1299900 | 0.818972 | 1.482565e-52 | -8.615850e-47 |
| Msa0468020 | Msa1299900 | 0.852467 | 4.529721e-61 | -8.615850e-47 |
| Msa0476490 | Msa1299900 | 0.805545 | 1.267594e-49 | -8.615850e-47 |
| Msa1029430 | Msa1299900 | 0.807345 | 5.289060e-50 | -8.615850e-47 |
| Msa1029510 | Msa1299900 | 0.814946 | 1.189008e-51 | -8.615850e-47 |
| Msa1030430 | Msa1299900 | 0.816667 | 4.913688e-52 | -8.615850e-47 |
| Msa1036020 | Msa1299900 | -0.818251 | 2.161145e-52 | -8.615850e-47 |
| Msa1044040 | Msa1299900 | 0.804736 | 1.872216e-49 | -8.615850e-47 |
| Msa1055360 | Msa1299900 | 0.809761 | 1.612969e-50 | -8.615850e-47 |
| Msa1058980 | Msa1299900 | 0.827119 | 1.865077e-54 | -8.615850e-47 |
| Msa1064210 | Msa1299900 | 0.810737 | 9.932946e-51 | -8.615850e-47 |
| Msa1067910 | Msa1299900 | 0.835752 | 1.397799e-56 | -8.615850e-47 |
| Msa1068110 | Msa1299900 | 0.825695 | 4.075083e-54 | -8.615850e-47 |
| Msa1068290 | Msa1299900 | 0.819617 | 1.056907e-52 | -8.615850e-47 |
| Msa1069440 | Msa1299900 | 0.806432 | 8.251159e-50 | -8.615850e-47 |
| Msa1072640 | Msa1299900 | 0.816929 | 4.292881e-52 | -8.615850e-47 |
| Msa1085370 | Msa1299900 | 0.846655 | 1.894701e-59 | -8.615850e-47 |
| Msa1102180 | Msa1299900 | 0.810304 | 1.232298e-50 | -8.615850e-47 |
| Msa0270460 | Msa1299900 | 0.826300 | 2.925359e-54 | -8.615850e-47 |
| Msa0282860 | Msa1299900 | 0.802961 | 4.374961e-49 | -8.615850e-47 |
| Msa0297860 | Msa1299900 | 0.802348 | 5.856151e-49 | -8.615850e-47 |
| Msa0309060 | Msa1299900 | 0.802578 | 5.248589e-49 | -8.615850e-47 |
| Msa0329060 | Msa1299900 | 0.829222 | 5.808356e-55 | -8.615850e-47 |
| Msa0353900 | Msa1299900 | 0.815666 | 8.226056e-52 | -8.615850e-47 |
| Msa1113210 | Msa1299900 | 0.806855 | 6.715325e-50 | -8.615850e-47 |
| Msa1117830 | Msa1299900 | 0.841129 | 5.730901e-58 | -8.615850e-47 |
| Msa1121630 | Msa1299900 | 0.802794 | 4.736665e-49 | -8.615850e-47 |
| Msa1130070 | Msa1299900 | 0.808500 | 3.003873e-50 | -8.615850e-47 |
| Msa1143910 | Msa1299900 | 0.815890 | 7.332336e-52 | -8.615850e-47 |
| Msa1150250 | Msa1299900 | 0.847619 | 1.031281e-59 | -8.615850e-47 |
| Msa1151120 | Msa1299900 | 0.828868 | 7.076867e-55 | -8.615850e-47 |
| Msa1157310 | Msa1299900 | 0.815803 | 7.667382e-52 | -8.615850e-47 |
| Msa1177620 | Msa1299900 | 0.804217 | 2.401333e-49 | -8.615850e-47 |
| Msa1184640 | Msa1299900 | 0.826567 | 2.527260e-54 | -8.615850e-47 |
| Msa1192150 | Msa1299900 | 0.804048 | 2.604045e-49 | -8.615850e-47 |
| Msa1211260 | Msa1299900 | 0.807749 | 4.341745e-50 | -8.615850e-47 |
| Msa1211300 | Msa1299900 | 0.812094 | 5.040210e-51 | -8.615850e-47 |
| Msa1211390 | Msa1299900 | 0.827599 | 1.431017e-54 | -8.615850e-47 |
| Msa1218720 | Msa1299900 | 0.800247 | 1.576368e-48 | -8.615850e-47 |
| Msa1219780 | Msa1299900 | -0.805760 | 1.142758e-49 | -8.615850e-47 |
| Msa1220740 | Msa1299900 | 0.825806 | 3.833821e-54 | -8.615850e-47 |
| Msa1221540 | Msa1299900 | 0.823226 | 1.552448e-53 | -8.615850e-47 |
| Msa1222030 | Msa1299900 | -0.812732 | 3.656512e-51 | -8.615850e-47 |
| Msa0495510 | Msa1299900 | 0.823522 | 1.323830e-53 | -8.615850e-47 |
| Msa0500490 | Msa1299900 | 0.814748 | 1.315468e-51 | -8.615850e-47 |
| Msa0505390 | Msa1299900 | 0.815785 | 7.738674e-52 | -8.615850e-47 |
| Msa0521940 | Msa1299900 | -0.809899 | 1.506545e-50 | -8.615850e-47 |
| Msa0528170 | Msa1299900 | 0.809211 | 2.116221e-50 | -8.615850e-47 |
| Msa0534380 | Msa1299900 | 0.828992 | 6.605310e-55 | -8.615850e-47 |
| Msa0539320 | Msa1299900 | 0.811004 | 8.694639e-51 | -8.615850e-47 |
| Msa0549740 | Msa1299900 | 0.801734 | 7.829010e-49 | -8.615850e-47 |
| Msa0551520 | Msa1299900 | 0.818325 | 2.079679e-52 | -8.615850e-47 |
| Msa0553350 | Msa1299900 | 0.821112 | 4.800249e-53 | -8.615850e-47 |
| Msa0555980 | Msa1299900 | 0.803153 | 3.993891e-49 | -8.615850e-47 |
| Msa0599250 | Msa1299900 | 0.804617 | 1.982408e-49 | -8.615850e-47 |
| Msa0850740 | Msa1299900 | 0.842631 | 2.298414e-58 | -8.615850e-47 |
| Msa0857080 | Msa1299900 | 0.812477 | 4.156511e-51 | -8.615850e-47 |
| Msa0865280 | Msa1299900 | 0.803568 | 3.276401e-49 | -8.615850e-47 |
| Msa0880170 | Msa1299900 | 0.805780 | 1.131350e-49 | -8.615850e-47 |
| Msa0884840 | Msa1299900 | 0.800646 | 1.306974e-48 | -8.615850e-47 |
| Msa0901660 | Msa1299900 | 0.823328 | 1.469188e-53 | -8.615850e-47 |
| Msa0906160 | Msa1299900 | 0.803646 | 3.155957e-49 | -8.615850e-47 |
| Msa0913120 | Msa1299900 | 0.827276 | 1.710645e-54 | -8.615850e-47 |
| Msa0927830 | Msa1299900 | 0.820528 | 6.540137e-53 | -8.615850e-47 |
| Msa0934830 | Msa1299900 | 0.812531 | 4.045033e-51 | -8.615850e-47 |
| Msa0946300 | Msa1299900 | 0.810251 | 1.264904e-50 | -8.615850e-47 |
| Msa0964650 | Msa1299900 | 0.822234 | 2.641549e-53 | -8.615850e-47 |
| Msa0967670 | Msa1299900 | 0.839393 | 1.627677e-57 | -8.615850e-47 |
| Msa0968960 | Msa1299900 | 0.800298 | 1.539287e-48 | -8.615850e-47 |
| Msa0971860 | Msa1299900 | 0.814578 | 1.434743e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299900 | MtrunA17_Chr8g0360741 | 97.340 | 188 | 5 | 0 | 2 | 189 | 197 | 384 | 5.35e-124 | 355 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299900 | AT5G54290.1 | 86.170 | 188 | 26 | 0 | 2 | 189 | 167 | 354 | 1.35e-97 | 287 |
| Msa1299900 | AT5G54290.2 | 86.170 | 188 | 26 | 0 | 2 | 189 | 168 | 355 | 1.75e-97 | 286 |
Find 55 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTGGCGGCAACTGATTT+TGG | 0.158615 | 8_3:-61303391 | None:intergenic |
| TTCTGGTTTGGCTGTAATTA+TGG | 0.159872 | 8_3:+61302896 | Msa1299900:CDS |
| TCAGAAACAAATTACCTTAT+AGG | 0.167684 | 8_3:-61304444 | None:intergenic |
| TCTTCTTCCTATCAGGTTAT+TGG | 0.179542 | 8_3:+61302759 | Msa1299900:CDS |
| GGATTACCTGTGGCTGCTTC+TGG | 0.231671 | 8_3:+61302879 | Msa1299900:CDS |
| AACAATGTCTTCTTCCTATC+AGG | 0.254653 | 8_3:+61302752 | None:intergenic |
| TGACTTACTTGATGGAAAAT+TGG | 0.255517 | 8_3:-61303407 | None:intergenic |
| ATACATCTCTCCCTTACTTT+TGG | 0.275809 | 8_3:+61304249 | Msa1299900:CDS |
| TCTGGTTTGGCTGTAATTAT+GGG | 0.303888 | 8_3:+61302897 | Msa1299900:CDS |
| ACCTGTGGCTGCTTCTGGTT+TGG | 0.311226 | 8_3:+61302884 | Msa1299900:CDS |
| ACCTGTTCTAGCCACCCTTC+TGG | 0.344381 | 8_3:+61303567 | Msa1299900:CDS |
| TACATTACCATTGTGGCAGC+TGG | 0.360323 | 8_3:-61304647 | None:intergenic |
| CAGCATGGATCAATCCTATA+AGG | 0.383503 | 8_3:+61304430 | Msa1299900:CDS |
| AAAAGAAGCAGCCAAAAGTA+AGG | 0.394341 | 8_3:-61304260 | None:intergenic |
| GGTGTGCAAGCATACCTGGC+TGG | 0.396078 | 8_3:+61303508 | Msa1299900:intron |
| CTTAGGTGTGCAAGCATACC+TGG | 0.399751 | 8_3:+61303504 | Msa1299900:intron |
| CCTGTTCTAGCCACCCTTCT+GGG | 0.417714 | 8_3:+61303568 | Msa1299900:CDS |
| TTTGTACAGAATCCAGTGAT+TGG | 0.432285 | 8_3:+61304196 | Msa1299900:intron |
| AGAATCTCCAATAACCTGAT+AGG | 0.435644 | 8_3:-61302766 | None:intergenic |
| AGCAAGCTGCCTCCAATCAC+TGG | 0.441209 | 8_3:-61304208 | None:intergenic |
| CCCAGAAGGGTGGCTAGAAC+AGG | 0.443114 | 8_3:-61303568 | None:intergenic |
| GTGTATATACCTTCTTAGAT+AGG | 0.464767 | 8_3:+61304618 | Msa1299900:CDS |
| GGAAAGGCTTATGGACAGAT+TGG | 0.471377 | 8_3:+61302852 | Msa1299900:CDS |
| GACAGCGGAGCAATGCTGTT+AGG | 0.503054 | 8_3:+61304590 | Msa1299900:intron |
| CTTACTTGATGGAAAATTGG+CGG | 0.519821 | 8_3:-61303404 | None:intergenic |
| AAGCAGCCACAGGTAATCCT+TGG | 0.531751 | 8_3:-61302875 | None:intergenic |
| GTGTGCAAGCATACCTGGCT+GGG | 0.532324 | 8_3:+61303509 | Msa1299900:CDS |
| ATCAAAACTATCGAAGAATG+AGG | 0.544028 | 8_3:-61303368 | None:intergenic |
| TTTGTTTCAGTACCTCAAGA+AGG | 0.547535 | 8_3:-61302926 | None:intergenic |
| TCAAAACTATCGAAGAATGA+GGG | 0.550215 | 8_3:-61303367 | None:intergenic |
| ACATTACCATTGTGGCAGCT+GGG | 0.561699 | 8_3:-61304646 | None:intergenic |
| AAAGAAGCAGCCAAAAGTAA+GGG | 0.563088 | 8_3:-61304259 | None:intergenic |
| CTAATGTGGTTGCAAGACCC+AGG | 0.563716 | 8_3:-61302800 | None:intergenic |
| CGTTTCGCAAGTACTCAGCA+TGG | 0.564228 | 8_3:+61304415 | Msa1299900:CDS |
| ATGCAAATGTAAGCCCAGCC+AGG | 0.569028 | 8_3:-61303522 | None:intergenic |
| GTACAGAATCCAGTGATTGG+AGG | 0.569251 | 8_3:+61304199 | Msa1299900:intron |
| TGGGAACAGCCTATCTAAGA+AGG | 0.570878 | 8_3:-61304627 | None:intergenic |
| TACGCCGAGCAGTGCTAATG+TGG | 0.571043 | 8_3:-61302814 | None:intergenic |
| GCTTATGGACAGATTGGCCA+AGG | 0.576833 | 8_3:+61302858 | Msa1299900:CDS |
| GGGATACGTCGCTGCATCCA+AGG | 0.580600 | 8_3:+61303588 | Msa1299900:CDS |
| GGTAATGTAGAAAATGTTGT+GGG | 0.594860 | 8_3:+61304661 | Msa1299900:exon |
| TGGTAATGTAGAAAATGTTG+TGG | 0.595826 | 8_3:+61304660 | Msa1299900:exon |
| TATGGGTCTGAACCTTCTTG+AGG | 0.597434 | 8_3:+61302914 | Msa1299900:CDS |
| GGAGCAATGCTGTTAGGAGG+TGG | 0.599846 | 8_3:+61304596 | Msa1299900:CDS |
| GCCAAACCAGAAGCAGCCAC+AGG | 0.604082 | 8_3:-61302885 | None:intergenic |
| AGCGGAGCAATGCTGTTAGG+AGG | 0.617303 | 8_3:+61304593 | Msa1299900:intron |
| GCTGTTCCCAGCTGCCACAA+TGG | 0.640005 | 8_3:+61304640 | Msa1299900:CDS |
| TGCAGCGACGTATCCCAGAA+GGG | 0.645363 | 8_3:-61303581 | None:intergenic |
| AACAGGTGTACTGCATGGTG+AGG | 0.645829 | 8_3:-61303551 | None:intergenic |
| GCAACCACATTAGCACTGCT+CGG | 0.646811 | 8_3:+61302810 | Msa1299900:CDS |
| CAAAACTATCGAAGAATGAG+GGG | 0.651562 | 8_3:-61303366 | None:intergenic |
| TAATGTGGTTGCAAGACCCA+GGG | 0.678219 | 8_3:-61302799 | None:intergenic |
| GATTGGCCAAGGATTACCTG+TGG | 0.712008 | 8_3:+61302869 | Msa1299900:CDS |
| GCTAGAACAGGTGTACTGCA+TGG | 0.719252 | 8_3:-61303556 | None:intergenic |
| AGCGACGTATCCCAGAAGGG+TGG | 0.729572 | 8_3:-61303578 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAAAAGAAAAATGTC+CGG | - | chr8_3:61303977-61303996 | None:intergenic | 15.0% |
| !! | AAATAAAAAAGAAAAATGTC+CGG | - | chr8_3:61303977-61303996 | None:intergenic | 15.0% |
| !! | TTAAATATCTTACTTACAAG+AGG | - | chr8_3:61303076-61303095 | None:intergenic | 20.0% |
| !!! | GTAAGAAATTACAGTATTTT+AGG | + | chr8_3:61303100-61303119 | Msa1299900:intron | 20.0% |
| !! | GTAAAAATTTATATGCTGAT+TGG | + | chr8_3:61303646-61303665 | Msa1299900:intron | 20.0% |
| !! | AACTAATAAGCAAATAAAAC+TGG | - | chr8_3:61303691-61303710 | None:intergenic | 20.0% |
| !! | TTGATTTATGACATAAATCT+TGG | + | chr8_3:61303995-61304014 | Msa1299900:intron | 20.0% |
| !! | TTAAATATCTTACTTACAAG+AGG | - | chr8_3:61303076-61303095 | None:intergenic | 20.0% |
| !!! | GTAAGAAATTACAGTATTTT+AGG | + | chr8_3:61303100-61303119 | Msa1299900:intron | 20.0% |
| !! | GTAAAAATTTATATGCTGAT+TGG | + | chr8_3:61303646-61303665 | Msa1299900:intron | 20.0% |
| !! | AACTAATAAGCAAATAAAAC+TGG | - | chr8_3:61303691-61303710 | None:intergenic | 20.0% |
| !! | TTGATTTATGACATAAATCT+TGG | + | chr8_3:61303995-61304014 | Msa1299900:intron | 20.0% |
| ! | TGAATATTGTTGTAAACACA+AGG | - | chr8_3:61302996-61303015 | None:intergenic | 25.0% |
| !!! | CAGTGTTTACAACAATTTTT+TGG | + | chr8_3:61303035-61303054 | Msa1299900:intron | 25.0% |
| ! | TTACAAGAGGTTGAAAAAAA+AGG | - | chr8_3:61303063-61303082 | None:intergenic | 25.0% |
| ! | ACGATAAAAATTTCTTCGAA+TGG | + | chr8_3:61303277-61303296 | Msa1299900:intron | 25.0% |
| !!! | CACATTTAGTTCTTTCAATA+TGG | + | chr8_3:61303443-61303462 | Msa1299900:intron | 25.0% |
| ! | TTACTTATGTTTGCATATCA+AGG | + | chr8_3:61303792-61303811 | Msa1299900:intron | 25.0% |
| ! | ATACAAAGTTGACCAAAAAT+TGG | - | chr8_3:61303952-61303971 | None:intergenic | 25.0% |
| !!! | AGTTATTTTGCTATATCACT+TGG | + | chr8_3:61304026-61304045 | Msa1299900:intron | 25.0% |
| ! | ATAAGATTAAATTCACGATC+CGG | + | chr8_3:61304080-61304099 | Msa1299900:intron | 25.0% |
| ! | TCGATATTCAAATCATGAAT+CGG | - | chr8_3:61304117-61304136 | None:intergenic | 25.0% |
| ! | TATCTTAAAGAAACGCTTTA+AGG | - | chr8_3:61304336-61304355 | None:intergenic | 25.0% |
| ! | TCAGAAACAAATTACCTTAT+AGG | - | chr8_3:61304447-61304466 | None:intergenic | 25.0% |
| ! | TACAAGCTATCCAATTAATT+AGG | - | chr8_3:61304531-61304550 | None:intergenic | 25.0% |
| ! | TGAATATTGTTGTAAACACA+AGG | - | chr8_3:61302996-61303015 | None:intergenic | 25.0% |
| !!! | CAGTGTTTACAACAATTTTT+TGG | + | chr8_3:61303035-61303054 | Msa1299900:intron | 25.0% |
| ! | TTACAAGAGGTTGAAAAAAA+AGG | - | chr8_3:61303063-61303082 | None:intergenic | 25.0% |
| ! | ACGATAAAAATTTCTTCGAA+TGG | + | chr8_3:61303277-61303296 | Msa1299900:intron | 25.0% |
| !!! | CACATTTAGTTCTTTCAATA+TGG | + | chr8_3:61303443-61303462 | Msa1299900:intron | 25.0% |
| ! | TTACTTATGTTTGCATATCA+AGG | + | chr8_3:61303792-61303811 | Msa1299900:intron | 25.0% |
| ! | ATACAAAGTTGACCAAAAAT+TGG | - | chr8_3:61303952-61303971 | None:intergenic | 25.0% |
| !!! | AGTTATTTTGCTATATCACT+TGG | + | chr8_3:61304026-61304045 | Msa1299900:intron | 25.0% |
| ! | ATAAGATTAAATTCACGATC+CGG | + | chr8_3:61304080-61304099 | Msa1299900:intron | 25.0% |
| ! | TCGATATTCAAATCATGAAT+CGG | - | chr8_3:61304117-61304136 | None:intergenic | 25.0% |
| ! | TATCTTAAAGAAACGCTTTA+AGG | - | chr8_3:61304336-61304355 | None:intergenic | 25.0% |
| ! | TCAGAAACAAATTACCTTAT+AGG | - | chr8_3:61304447-61304466 | None:intergenic | 25.0% |
| ! | TACAAGCTATCCAATTAATT+AGG | - | chr8_3:61304531-61304550 | None:intergenic | 25.0% |
| GAAAAGTGATATCACAGATT+TGG | - | chr8_3:61302953-61302972 | None:intergenic | 30.0% | |
| GAGTAAAAGAAACTACATCT+TGG | - | chr8_3:61303151-61303170 | None:intergenic | 30.0% | |
| TGATCTGCAGAAAAAATTCA+AGG | - | chr8_3:61303333-61303352 | None:intergenic | 30.0% | |
| TCAAAACTATCGAAGAATGA+GGG | - | chr8_3:61303370-61303389 | None:intergenic | 30.0% | |
| ATCAAAACTATCGAAGAATG+AGG | - | chr8_3:61303371-61303390 | None:intergenic | 30.0% | |
| TGACTTACTTGATGGAAAAT+TGG | - | chr8_3:61303410-61303429 | None:intergenic | 30.0% | |
| !! | AAAAGCATTGACTTACTTGA+TGG | - | chr8_3:61303418-61303437 | None:intergenic | 30.0% |
| CATGAACAAATTCTACTCTT+AGG | + | chr8_3:61303487-61303506 | Msa1299900:intron | 30.0% | |
| TTTACATCAAGAAGCAACAT+TGG | - | chr8_3:61303631-61303650 | None:intergenic | 30.0% | |
| ! | AAATAAAACTGGTTTACCCT+TGG | - | chr8_3:61303680-61303699 | None:intergenic | 30.0% |
| ! | ATCGGTCAAATAGATTTTAC+TGG | + | chr8_3:61303743-61303762 | Msa1299900:intron | 30.0% |
| ! | TTGTATAGTCAGCCAATTTT+TGG | + | chr8_3:61303937-61303956 | Msa1299900:intron | 30.0% |
| ! | TGAATCGGAAGAAAATTTTC+CGG | - | chr8_3:61304102-61304121 | None:intergenic | 30.0% |
| GTGACTAAATATGCAAATCA+TGG | - | chr8_3:61304148-61304167 | None:intergenic | 30.0% | |
| GTATCCACTTCCTAATTAAT+TGG | + | chr8_3:61304518-61304537 | Msa1299900:intron | 30.0% | |
| CTATCCAATTAATTAGGAAG+TGG | - | chr8_3:61304525-61304544 | None:intergenic | 30.0% | |
| GTGTATATACCTTCTTAGAT+AGG | + | chr8_3:61304618-61304637 | Msa1299900:CDS | 30.0% | |
| ! | CATTTTCTACATTACCATTG+TGG | - | chr8_3:61304657-61304676 | None:intergenic | 30.0% |
| ! | TGGTAATGTAGAAAATGTTG+TGG | + | chr8_3:61304660-61304679 | Msa1299900:exon | 30.0% |
| GGTAATGTAGAAAATGTTGT+GGG | + | chr8_3:61304661-61304680 | Msa1299900:exon | 30.0% | |
| GAAAAGTGATATCACAGATT+TGG | - | chr8_3:61302953-61302972 | None:intergenic | 30.0% | |
| GAGTAAAAGAAACTACATCT+TGG | - | chr8_3:61303151-61303170 | None:intergenic | 30.0% | |
| TGATCTGCAGAAAAAATTCA+AGG | - | chr8_3:61303333-61303352 | None:intergenic | 30.0% | |
| TCAAAACTATCGAAGAATGA+GGG | - | chr8_3:61303370-61303389 | None:intergenic | 30.0% | |
| ATCAAAACTATCGAAGAATG+AGG | - | chr8_3:61303371-61303390 | None:intergenic | 30.0% | |
| TGACTTACTTGATGGAAAAT+TGG | - | chr8_3:61303410-61303429 | None:intergenic | 30.0% | |
| !! | AAAAGCATTGACTTACTTGA+TGG | - | chr8_3:61303418-61303437 | None:intergenic | 30.0% |
| CATGAACAAATTCTACTCTT+AGG | + | chr8_3:61303487-61303506 | Msa1299900:intron | 30.0% | |
| TTTACATCAAGAAGCAACAT+TGG | - | chr8_3:61303631-61303650 | None:intergenic | 30.0% | |
| ! | AAATAAAACTGGTTTACCCT+TGG | - | chr8_3:61303680-61303699 | None:intergenic | 30.0% |
| ! | ATCGGTCAAATAGATTTTAC+TGG | + | chr8_3:61303743-61303762 | Msa1299900:intron | 30.0% |
| ! | TTGTATAGTCAGCCAATTTT+TGG | + | chr8_3:61303937-61303956 | Msa1299900:intron | 30.0% |
| ! | TGAATCGGAAGAAAATTTTC+CGG | - | chr8_3:61304102-61304121 | None:intergenic | 30.0% |
| GTGACTAAATATGCAAATCA+TGG | - | chr8_3:61304148-61304167 | None:intergenic | 30.0% | |
| GTATCCACTTCCTAATTAAT+TGG | + | chr8_3:61304518-61304537 | Msa1299900:intron | 30.0% | |
| CTATCCAATTAATTAGGAAG+TGG | - | chr8_3:61304525-61304544 | None:intergenic | 30.0% | |
| GTGTATATACCTTCTTAGAT+AGG | + | chr8_3:61304618-61304637 | Msa1299900:CDS | 30.0% | |
| ! | CATTTTCTACATTACCATTG+TGG | - | chr8_3:61304657-61304676 | None:intergenic | 30.0% |
| ! | TGGTAATGTAGAAAATGTTG+TGG | + | chr8_3:61304660-61304679 | Msa1299900:exon | 30.0% |
| GGTAATGTAGAAAATGTTGT+GGG | + | chr8_3:61304661-61304680 | Msa1299900:exon | 30.0% | |
| TCTTCTTCCTATCAGGTTAT+TGG | + | chr8_3:61302759-61302778 | Msa1299900:CDS | 35.0% | |
| AGAATCTCCAATAACCTGAT+AGG | - | chr8_3:61302769-61302788 | None:intergenic | 35.0% | |
| ! | AGATTCTATAGCATTTTCCC+TGG | + | chr8_3:61302782-61302801 | Msa1299900:CDS | 35.0% |
| ! | GATTCTATAGCATTTTCCCT+GGG | + | chr8_3:61302783-61302802 | Msa1299900:CDS | 35.0% |
| !! | TTCTGGTTTGGCTGTAATTA+TGG | + | chr8_3:61302896-61302915 | Msa1299900:CDS | 35.0% |
| !! | TCTGGTTTGGCTGTAATTAT+GGG | + | chr8_3:61302897-61302916 | Msa1299900:CDS | 35.0% |
| TTTGTTTCAGTACCTCAAGA+AGG | - | chr8_3:61302929-61302948 | None:intergenic | 35.0% | |
| TTCATAGTCTAACTCTCAGT+TGG | + | chr8_3:61303012-61303031 | Msa1299900:intron | 35.0% | |
| ! | GATTCACTGAAGCAAGTTTT+TGG | + | chr8_3:61303244-61303263 | Msa1299900:intron | 35.0% |
| CAAAACTATCGAAGAATGAG+GGG | - | chr8_3:61303369-61303388 | None:intergenic | 35.0% | |
| CTTACTTGATGGAAAATTGG+CGG | - | chr8_3:61303407-61303426 | None:intergenic | 35.0% | |
| ! | AAGCAACATTGGTTACTAAC+AGG | - | chr8_3:61303620-61303639 | None:intergenic | 35.0% |
| TAAAAACTCAGCAGTCTCAT+CGG | + | chr8_3:61303725-61303744 | Msa1299900:intron | 35.0% | |
| !! | CACACACACATGTATTGATT+GGG | - | chr8_3:61303891-61303910 | None:intergenic | 35.0% |
| ! | ACACACACACATGTATTGAT+TGG | - | chr8_3:61303892-61303911 | None:intergenic | 35.0% |
| ! | TGGCTGACTATACAAAGTTT+TGG | - | chr8_3:61303932-61303951 | None:intergenic | 35.0% |
| TTTGGTCAACTTTGTATAGC+CGG | + | chr8_3:61303955-61303974 | Msa1299900:intron | 35.0% | |
| AGTCACTCTTATGCAAATGA+AGG | + | chr8_3:61304162-61304181 | Msa1299900:intron | 35.0% | |
| TTTGTACAGAATCCAGTGAT+TGG | + | chr8_3:61304196-61304215 | Msa1299900:intron | 35.0% | |
| !! | TTGCTTTTGACATACACAAC+AGG | + | chr8_3:61304226-61304245 | Msa1299900:CDS | 35.0% |
| ! | ATACATCTCTCCCTTACTTT+TGG | + | chr8_3:61304249-61304268 | Msa1299900:CDS | 35.0% |
| AAAGAAGCAGCCAAAAGTAA+GGG | - | chr8_3:61304262-61304281 | None:intergenic | 35.0% | |
| AAAAGAAGCAGCCAAAAGTA+AGG | - | chr8_3:61304263-61304282 | None:intergenic | 35.0% | |
| GAAAGCAAGCTCTGTAAATA+CGG | - | chr8_3:61304396-61304415 | None:intergenic | 35.0% | |
| TCTTCTTCCTATCAGGTTAT+TGG | + | chr8_3:61302759-61302778 | Msa1299900:CDS | 35.0% | |
| AGAATCTCCAATAACCTGAT+AGG | - | chr8_3:61302769-61302788 | None:intergenic | 35.0% | |
| ! | AGATTCTATAGCATTTTCCC+TGG | + | chr8_3:61302782-61302801 | Msa1299900:CDS | 35.0% |
| ! | GATTCTATAGCATTTTCCCT+GGG | + | chr8_3:61302783-61302802 | Msa1299900:CDS | 35.0% |
| !! | TTCTGGTTTGGCTGTAATTA+TGG | + | chr8_3:61302896-61302915 | Msa1299900:CDS | 35.0% |
| !! | TCTGGTTTGGCTGTAATTAT+GGG | + | chr8_3:61302897-61302916 | Msa1299900:CDS | 35.0% |
| TTTGTTTCAGTACCTCAAGA+AGG | - | chr8_3:61302929-61302948 | None:intergenic | 35.0% | |
| TTCATAGTCTAACTCTCAGT+TGG | + | chr8_3:61303012-61303031 | Msa1299900:intron | 35.0% | |
| ! | GATTCACTGAAGCAAGTTTT+TGG | + | chr8_3:61303244-61303263 | Msa1299900:intron | 35.0% |
| CAAAACTATCGAAGAATGAG+GGG | - | chr8_3:61303369-61303388 | None:intergenic | 35.0% | |
| CTTACTTGATGGAAAATTGG+CGG | - | chr8_3:61303407-61303426 | None:intergenic | 35.0% | |
| ! | AAGCAACATTGGTTACTAAC+AGG | - | chr8_3:61303620-61303639 | None:intergenic | 35.0% |
| TAAAAACTCAGCAGTCTCAT+CGG | + | chr8_3:61303725-61303744 | Msa1299900:intron | 35.0% | |
| !! | CACACACACATGTATTGATT+GGG | - | chr8_3:61303891-61303910 | None:intergenic | 35.0% |
| ! | ACACACACACATGTATTGAT+TGG | - | chr8_3:61303892-61303911 | None:intergenic | 35.0% |
| ! | TGGCTGACTATACAAAGTTT+TGG | - | chr8_3:61303932-61303951 | None:intergenic | 35.0% |
| TTTGGTCAACTTTGTATAGC+CGG | + | chr8_3:61303955-61303974 | Msa1299900:intron | 35.0% | |
| AGTCACTCTTATGCAAATGA+AGG | + | chr8_3:61304162-61304181 | Msa1299900:intron | 35.0% | |
| TTTGTACAGAATCCAGTGAT+TGG | + | chr8_3:61304196-61304215 | Msa1299900:intron | 35.0% | |
| !! | TTGCTTTTGACATACACAAC+AGG | + | chr8_3:61304226-61304245 | Msa1299900:CDS | 35.0% |
| ! | ATACATCTCTCCCTTACTTT+TGG | + | chr8_3:61304249-61304268 | Msa1299900:CDS | 35.0% |
| AAAGAAGCAGCCAAAAGTAA+GGG | - | chr8_3:61304262-61304281 | None:intergenic | 35.0% | |
| AAAAGAAGCAGCCAAAAGTA+AGG | - | chr8_3:61304263-61304282 | None:intergenic | 35.0% | |
| GAAAGCAAGCTCTGTAAATA+CGG | - | chr8_3:61304396-61304415 | None:intergenic | 35.0% | |
| ! | TCTTTTGCAGGAAAGGCTTA+TGG | + | chr8_3:61302843-61302862 | Msa1299900:CDS | 40.0% |
| !! | AAATTGGCGGCAACTGATTT+TGG | - | chr8_3:61303394-61303413 | None:intergenic | 40.0% |
| !! | TTACTAACAGGAGAGTACCT+TGG | - | chr8_3:61303608-61303627 | None:intergenic | 40.0% |
| CTGATTGGAAAAAGAGCCAA+GGG | + | chr8_3:61303661-61303680 | Msa1299900:intron | 40.0% | |
| CAAGGAATATGCACACATCA+TGG | + | chr8_3:61303810-61303829 | Msa1299900:intron | 40.0% | |
| !! | TTTTGGCTGCTTCTTTTGCT+GGG | + | chr8_3:61304266-61304285 | Msa1299900:CDS | 40.0% |
| CAGCATGGATCAATCCTATA+AGG | + | chr8_3:61304430-61304449 | Msa1299900:CDS | 40.0% | |
| CACGACAAGTATCAGAAACA+TGG | - | chr8_3:61304558-61304577 | None:intergenic | 40.0% | |
| ! | TCTTTTGCAGGAAAGGCTTA+TGG | + | chr8_3:61302843-61302862 | Msa1299900:CDS | 40.0% |
| !! | AAATTGGCGGCAACTGATTT+TGG | - | chr8_3:61303394-61303413 | None:intergenic | 40.0% |
| !! | TTACTAACAGGAGAGTACCT+TGG | - | chr8_3:61303608-61303627 | None:intergenic | 40.0% |
| CTGATTGGAAAAAGAGCCAA+GGG | + | chr8_3:61303661-61303680 | Msa1299900:intron | 40.0% | |
| CAAGGAATATGCACACATCA+TGG | + | chr8_3:61303810-61303829 | Msa1299900:intron | 40.0% | |
| !! | TTTTGGCTGCTTCTTTTGCT+GGG | + | chr8_3:61304266-61304285 | Msa1299900:CDS | 40.0% |
| CAGCATGGATCAATCCTATA+AGG | + | chr8_3:61304430-61304449 | Msa1299900:CDS | 40.0% | |
| CACGACAAGTATCAGAAACA+TGG | - | chr8_3:61304558-61304577 | None:intergenic | 40.0% | |
| TAATGTGGTTGCAAGACCCA+GGG | - | chr8_3:61302802-61302821 | None:intergenic | 45.0% | |
| GGAAAGGCTTATGGACAGAT+TGG | + | chr8_3:61302852-61302871 | Msa1299900:CDS | 45.0% | |
| TATGGGTCTGAACCTTCTTG+AGG | + | chr8_3:61302914-61302933 | Msa1299900:CDS | 45.0% | |
| GCTGATTGGAAAAAGAGCCA+AGG | + | chr8_3:61303660-61303679 | Msa1299900:intron | 45.0% | |
| GTACAGAATCCAGTGATTGG+AGG | + | chr8_3:61304199-61304218 | Msa1299900:intron | 45.0% | |
| !! | CTTTTGGCTGCTTCTTTTGC+TGG | + | chr8_3:61304265-61304284 | Msa1299900:CDS | 45.0% |
| ! | TTTGGCTGCTTCTTTTGCTG+GGG | + | chr8_3:61304267-61304286 | Msa1299900:CDS | 45.0% |
| !! | GTGATTTGCTTGTTCGACAG+CGG | + | chr8_3:61304575-61304594 | Msa1299900:intron | 45.0% |
| TGGGAACAGCCTATCTAAGA+AGG | - | chr8_3:61304630-61304649 | None:intergenic | 45.0% | |
| ACATTACCATTGTGGCAGCT+GGG | - | chr8_3:61304649-61304668 | None:intergenic | 45.0% | |
| TACATTACCATTGTGGCAGC+TGG | - | chr8_3:61304650-61304669 | None:intergenic | 45.0% | |
| TAATGTGGTTGCAAGACCCA+GGG | - | chr8_3:61302802-61302821 | None:intergenic | 45.0% | |
| GGAAAGGCTTATGGACAGAT+TGG | + | chr8_3:61302852-61302871 | Msa1299900:CDS | 45.0% | |
| TATGGGTCTGAACCTTCTTG+AGG | + | chr8_3:61302914-61302933 | Msa1299900:CDS | 45.0% | |
| GCTGATTGGAAAAAGAGCCA+AGG | + | chr8_3:61303660-61303679 | Msa1299900:intron | 45.0% | |
| GTACAGAATCCAGTGATTGG+AGG | + | chr8_3:61304199-61304218 | Msa1299900:intron | 45.0% | |
| !! | CTTTTGGCTGCTTCTTTTGC+TGG | + | chr8_3:61304265-61304284 | Msa1299900:CDS | 45.0% |
| ! | TTTGGCTGCTTCTTTTGCTG+GGG | + | chr8_3:61304267-61304286 | Msa1299900:CDS | 45.0% |
| !! | GTGATTTGCTTGTTCGACAG+CGG | + | chr8_3:61304575-61304594 | Msa1299900:intron | 45.0% |
| TGGGAACAGCCTATCTAAGA+AGG | - | chr8_3:61304630-61304649 | None:intergenic | 45.0% | |
| ACATTACCATTGTGGCAGCT+GGG | - | chr8_3:61304649-61304668 | None:intergenic | 45.0% | |
| TACATTACCATTGTGGCAGC+TGG | - | chr8_3:61304650-61304669 | None:intergenic | 45.0% | |
| CTAATGTGGTTGCAAGACCC+AGG | - | chr8_3:61302803-61302822 | None:intergenic | 50.0% | |
| GCAACCACATTAGCACTGCT+CGG | + | chr8_3:61302810-61302829 | Msa1299900:CDS | 50.0% | |
| !!! | AGGAGCGTCTTTTGCAGGAA+AGG | + | chr8_3:61302836-61302855 | Msa1299900:CDS | 50.0% |
| ! | GCTTATGGACAGATTGGCCA+AGG | + | chr8_3:61302858-61302877 | Msa1299900:CDS | 50.0% |
| ! | GATTGGCCAAGGATTACCTG+TGG | + | chr8_3:61302869-61302888 | Msa1299900:CDS | 50.0% |
| AAGCAGCCACAGGTAATCCT+TGG | - | chr8_3:61302878-61302897 | None:intergenic | 50.0% | |
| CTTAGGTGTGCAAGCATACC+TGG | + | chr8_3:61303504-61303523 | Msa1299900:intron | 50.0% | |
| ATGCAAATGTAAGCCCAGCC+AGG | - | chr8_3:61303525-61303544 | None:intergenic | 50.0% | |
| AACAGGTGTACTGCATGGTG+AGG | - | chr8_3:61303554-61303573 | None:intergenic | 50.0% | |
| GCTAGAACAGGTGTACTGCA+TGG | - | chr8_3:61303559-61303578 | None:intergenic | 50.0% | |
| !! | TTCTTTTGCTGGGGCGTTAC+AGG | + | chr8_3:61304276-61304295 | Msa1299900:CDS | 50.0% |
| CGTTTCGCAAGTACTCAGCA+TGG | + | chr8_3:61304415-61304434 | Msa1299900:CDS | 50.0% | |
| CTAATGTGGTTGCAAGACCC+AGG | - | chr8_3:61302803-61302822 | None:intergenic | 50.0% | |
| GCAACCACATTAGCACTGCT+CGG | + | chr8_3:61302810-61302829 | Msa1299900:CDS | 50.0% | |
| !!! | AGGAGCGTCTTTTGCAGGAA+AGG | + | chr8_3:61302836-61302855 | Msa1299900:CDS | 50.0% |
| ! | GCTTATGGACAGATTGGCCA+AGG | + | chr8_3:61302858-61302877 | Msa1299900:CDS | 50.0% |
| ! | GATTGGCCAAGGATTACCTG+TGG | + | chr8_3:61302869-61302888 | Msa1299900:CDS | 50.0% |
| AAGCAGCCACAGGTAATCCT+TGG | - | chr8_3:61302878-61302897 | None:intergenic | 50.0% | |
| CTTAGGTGTGCAAGCATACC+TGG | + | chr8_3:61303504-61303523 | Msa1299900:intron | 50.0% | |
| ATGCAAATGTAAGCCCAGCC+AGG | - | chr8_3:61303525-61303544 | None:intergenic | 50.0% | |
| AACAGGTGTACTGCATGGTG+AGG | - | chr8_3:61303554-61303573 | None:intergenic | 50.0% | |
| GCTAGAACAGGTGTACTGCA+TGG | - | chr8_3:61303559-61303578 | None:intergenic | 50.0% | |
| !! | TTCTTTTGCTGGGGCGTTAC+AGG | + | chr8_3:61304276-61304295 | Msa1299900:CDS | 50.0% |
| CGTTTCGCAAGTACTCAGCA+TGG | + | chr8_3:61304415-61304434 | Msa1299900:CDS | 50.0% | |
| TACGCCGAGCAGTGCTAATG+TGG | - | chr8_3:61302817-61302836 | None:intergenic | 55.0% | |
| ACATTAGCACTGCTCGGCGT+AGG | + | chr8_3:61302816-61302835 | Msa1299900:CDS | 55.0% | |
| GGATTACCTGTGGCTGCTTC+TGG | + | chr8_3:61302879-61302898 | Msa1299900:CDS | 55.0% | |
| ! | ACCTGTGGCTGCTTCTGGTT+TGG | + | chr8_3:61302884-61302903 | Msa1299900:CDS | 55.0% |
| GTGTGCAAGCATACCTGGCT+GGG | + | chr8_3:61303509-61303528 | Msa1299900:CDS | 55.0% | |
| ACCTGTTCTAGCCACCCTTC+TGG | + | chr8_3:61303567-61303586 | Msa1299900:CDS | 55.0% | |
| CCTGTTCTAGCCACCCTTCT+GGG | + | chr8_3:61303568-61303587 | Msa1299900:CDS | 55.0% | |
| TGCAGCGACGTATCCCAGAA+GGG | - | chr8_3:61303584-61303603 | None:intergenic | 55.0% | |
| ATGCAGCGACGTATCCCAGA+AGG | - | chr8_3:61303585-61303604 | None:intergenic | 55.0% | |
| AGCAAGCTGCCTCCAATCAC+TGG | - | chr8_3:61304211-61304230 | None:intergenic | 55.0% | |
| GACAGCGGAGCAATGCTGTT+AGG | + | chr8_3:61304590-61304609 | Msa1299900:intron | 55.0% | |
| AGCGGAGCAATGCTGTTAGG+AGG | + | chr8_3:61304593-61304612 | Msa1299900:intron | 55.0% | |
| GGAGCAATGCTGTTAGGAGG+TGG | + | chr8_3:61304596-61304615 | Msa1299900:CDS | 55.0% | |
| TACGCCGAGCAGTGCTAATG+TGG | - | chr8_3:61302817-61302836 | None:intergenic | 55.0% | |
| ACATTAGCACTGCTCGGCGT+AGG | + | chr8_3:61302816-61302835 | Msa1299900:CDS | 55.0% | |
| GGATTACCTGTGGCTGCTTC+TGG | + | chr8_3:61302879-61302898 | Msa1299900:CDS | 55.0% | |
| ! | ACCTGTGGCTGCTTCTGGTT+TGG | + | chr8_3:61302884-61302903 | Msa1299900:CDS | 55.0% |
| GTGTGCAAGCATACCTGGCT+GGG | + | chr8_3:61303509-61303528 | Msa1299900:CDS | 55.0% | |
| ACCTGTTCTAGCCACCCTTC+TGG | + | chr8_3:61303567-61303586 | Msa1299900:CDS | 55.0% | |
| CCTGTTCTAGCCACCCTTCT+GGG | + | chr8_3:61303568-61303587 | Msa1299900:CDS | 55.0% | |
| TGCAGCGACGTATCCCAGAA+GGG | - | chr8_3:61303584-61303603 | None:intergenic | 55.0% | |
| ATGCAGCGACGTATCCCAGA+AGG | - | chr8_3:61303585-61303604 | None:intergenic | 55.0% | |
| AGCAAGCTGCCTCCAATCAC+TGG | - | chr8_3:61304211-61304230 | None:intergenic | 55.0% | |
| GACAGCGGAGCAATGCTGTT+AGG | + | chr8_3:61304590-61304609 | Msa1299900:intron | 55.0% | |
| AGCGGAGCAATGCTGTTAGG+AGG | + | chr8_3:61304593-61304612 | Msa1299900:intron | 55.0% | |
| GGAGCAATGCTGTTAGGAGG+TGG | + | chr8_3:61304596-61304615 | Msa1299900:CDS | 55.0% | |
| !!! | GGCGTAGGAGCGTCTTTTGC+AGG | + | chr8_3:61302831-61302850 | Msa1299900:CDS | 60.0% |
| GCCAAACCAGAAGCAGCCAC+AGG | - | chr8_3:61302888-61302907 | None:intergenic | 60.0% | |
| GGTGTGCAAGCATACCTGGC+TGG | + | chr8_3:61303508-61303527 | Msa1299900:intron | 60.0% | |
| CCCAGAAGGGTGGCTAGAAC+AGG | - | chr8_3:61303571-61303590 | None:intergenic | 60.0% | |
| AGCGACGTATCCCAGAAGGG+TGG | - | chr8_3:61303581-61303600 | None:intergenic | 60.0% | |
| GGGATACGTCGCTGCATCCA+AGG | + | chr8_3:61303588-61303607 | Msa1299900:CDS | 60.0% | |
| GCTGTTCCCAGCTGCCACAA+TGG | + | chr8_3:61304640-61304659 | Msa1299900:CDS | 60.0% | |
| !!! | GGCGTAGGAGCGTCTTTTGC+AGG | + | chr8_3:61302831-61302850 | Msa1299900:CDS | 60.0% |
| GCCAAACCAGAAGCAGCCAC+AGG | - | chr8_3:61302888-61302907 | None:intergenic | 60.0% | |
| GGTGTGCAAGCATACCTGGC+TGG | + | chr8_3:61303508-61303527 | Msa1299900:intron | 60.0% | |
| CCCAGAAGGGTGGCTAGAAC+AGG | - | chr8_3:61303571-61303590 | None:intergenic | 60.0% | |
| AGCGACGTATCCCAGAAGGG+TGG | - | chr8_3:61303581-61303600 | None:intergenic | 60.0% | |
| GGGATACGTCGCTGCATCCA+AGG | + | chr8_3:61303588-61303607 | Msa1299900:CDS | 60.0% | |
| GCTGTTCCCAGCTGCCACAA+TGG | + | chr8_3:61304640-61304659 | Msa1299900:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 61302756 | 61304802 | 61302756 | ID=Msa1299900;Name=Msa1299900 |
| chr8_3 | mRNA | 61302756 | 61304802 | 61302756 | ID=Msa1299900-mRNA-1;Parent=Msa1299900;Name=Msa1299900-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|1|0.83|1|1|1|6|132|189 |
| chr8_3 | exon | 61302756 | 61302935 | 61302756 | ID=Msa1299900-mRNA-1:exon:18039;Parent=Msa1299900-mRNA-1 |
| chr8_3 | exon | 61303349 | 61303421 | 61303349 | ID=Msa1299900-mRNA-1:exon:18040;Parent=Msa1299900-mRNA-1 |
| chr8_3 | exon | 61303509 | 61303609 | 61303509 | ID=Msa1299900-mRNA-1:exon:18041;Parent=Msa1299900-mRNA-1 |
| chr8_3 | exon | 61304205 | 61304297 | 61304205 | ID=Msa1299900-mRNA-1:exon:18042;Parent=Msa1299900-mRNA-1 |
| chr8_3 | exon | 61304405 | 61304451 | 61304405 | ID=Msa1299900-mRNA-1:exon:18043;Parent=Msa1299900-mRNA-1 |
| chr8_3 | exon | 61304595 | 61304802 | 61304595 | ID=Msa1299900-mRNA-1:exon:18044;Parent=Msa1299900-mRNA-1 |
| chr8_3 | CDS | 61302756 | 61302935 | 61302756 | ID=Msa1299900-mRNA-1:cds;Parent=Msa1299900-mRNA-1 |
| chr8_3 | CDS | 61303349 | 61303421 | 61303349 | ID=Msa1299900-mRNA-1:cds;Parent=Msa1299900-mRNA-1 |
| chr8_3 | CDS | 61303509 | 61303609 | 61303509 | ID=Msa1299900-mRNA-1:cds;Parent=Msa1299900-mRNA-1 |
| chr8_3 | CDS | 61304205 | 61304297 | 61304205 | ID=Msa1299900-mRNA-1:cds;Parent=Msa1299900-mRNA-1 |
| chr8_3 | CDS | 61304405 | 61304451 | 61304405 | ID=Msa1299900-mRNA-1:cds;Parent=Msa1299900-mRNA-1 |
| chr8_3 | CDS | 61304595 | 61304670 | 61304595 | ID=Msa1299900-mRNA-1:cds;Parent=Msa1299900-mRNA-1 |
| chr8_3 | three_prime_UTR | 61304671 | 61304802 | 61304671 | ID=Msa1299900-mRNA-1:three_prime_utr;Parent=Msa1299900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
