AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0114240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0114240 MtrunA17_Chr1g0172361 98.780 82 1 0 1 82 339 420 1.06e-51 166
Msa0114240 MtrunA17_Chr7g0249581 46.914 81 43 0 1 81 380 460 6.63e-18 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0114240 AT3G57190.1 60.494 81 31 1 1 81 321 400 1.75e-21 86.7
Msa0114240 AT5G36170.2 51.948 77 37 0 2 78 365 441 3.69e-19 80.1
Msa0114240 AT5G36170.1 51.948 77 37 0 2 78 366 442 3.70e-19 80.1

Find 84 sgRNAs with CRISPR-Local

Find 709 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATCTTCACAAATTGTTTA+TGG 0.130261 1_3:+30751900 None:intergenic
ATATCATCCTAAATAATTTA+TGG 0.193640 1_3:+30750351 None:intergenic
TGTAATTGTTGTTTAACTTA+TGG 0.217590 1_3:+30752459 None:intergenic
TTCTTATCCATAAATTATTT+AGG 0.222589 1_3:-30750358 Msa0114240:three_prime_UTR
TTGTGCAATTTCTTGCTAAA+AGG 0.242221 1_3:+30752390 None:intergenic
CAAGGAGTTGGTAGTATAAA+TGG 0.246573 1_3:-30750598 Msa0114240:CDS
CAACAATTACAGATCTTAAT+AGG 0.255398 1_3:-30752447 Msa0114240:five_prime_UTR
TAGGATTTACTTCAATTCTT+TGG 0.260548 1_3:-30750292 Msa0114240:three_prime_UTR
ACGTTACTGTATTCTTAATT+TGG 0.261253 1_3:-30750190 Msa0114240:three_prime_UTR
GAAATTGAATTTACTCAAAA+AGG 0.271005 1_3:+30752242 None:intergenic
CCTGCATGTAATGTATAAAA+TGG 0.285975 1_3:-30752074 Msa0114240:five_prime_UTR
ATCCGACAACATGGTTCTTT+TGG 0.312800 1_3:-30752303 Msa0114240:five_prime_UTR
ATTCAATTTCGTTCAGCTAT+AGG 0.319308 1_3:-30752229 Msa0114240:five_prime_UTR
ATCTCGTCTCCCTTGATTCA+TGG 0.321150 1_3:-30751620 Msa0114240:five_prime_UTR
TGGCCTTTCTCTTCACCATA+TGG 0.331113 1_3:+30752135 None:intergenic
TATGTCAGTACAGGCAAAAT+TGG 0.335794 1_3:+30750237 None:intergenic
TAGGCTAATGAATTATAGTA+TGG 0.343520 1_3:-30751771 Msa0114240:five_prime_UTR
CTTTCATCTTATTTGCAAAC+TGG 0.356322 1_3:+30750665 None:intergenic
GGCAGTGTAGTGTTGTTAAA+TGG 0.359647 1_3:-30751963 Msa0114240:five_prime_UTR
TCTACAATGTGTATAATGAT+AGG 0.366075 1_3:+30752102 None:intergenic
GGCCTTTCTCTTCACCATAT+GGG 0.374018 1_3:+30752136 None:intergenic
AATTGGGCCAAACATTAGTC+TGG 0.375224 1_3:+30752001 None:intergenic
TGCATTCGTCATATACCTAC+TGG 0.380498 1_3:-30751566 Msa0114240:five_prime_UTR
ATACAGTTCAAAACATATAT+AGG 0.389984 1_3:-30752193 Msa0114240:five_prime_UTR
ACATCATGTACTAACTTGTA+TGG 0.392795 1_3:+30750514 None:intergenic
CGACAAATTCAAACTAATGA+TGG 0.393706 1_3:+30752328 None:intergenic
GTGTTGTTGATGGCAGAATA+TGG 0.402743 1_3:+30751818 None:intergenic
TATAGTATGGTATAGATGTT+TGG 0.413145 1_3:-30751758 Msa0114240:five_prime_UTR
TTTCTGTTCTCCATGAATCA+AGG 0.420191 1_3:+30751610 None:intergenic
TTATACATTACATGCAGGTT+AGG 0.420784 1_3:+30752079 None:intergenic
TCAATGTGATGTATTGAAAT+CGG 0.427103 1_3:+30758028 None:intergenic
TGATTTCCCAGACTAATGTT+TGG 0.428675 1_3:-30752008 Msa0114240:five_prime_UTR
GCCTATGGCACCACCATGGC+AGG 0.438201 1_3:+30751878 None:intergenic
ATGGTGGTGCCATAGGCCGC+TGG 0.445128 1_3:-30751872 Msa0114240:five_prime_UTR
TTAATATGAGCCGCAATAAG+AGG 0.455927 1_3:+30750436 None:intergenic
AGGCCGCTGGGATGTTCATA+TGG 0.459088 1_3:-30751859 Msa0114240:five_prime_UTR
ACTTGTAACAGTGTTGTTGA+TGG 0.463169 1_3:+30751808 None:intergenic
ATATGACGAATGCAAACTAT+AGG 0.480794 1_3:+30751575 None:intergenic
TTCTGTTCTCCATGAATCAA+GGG 0.482036 1_3:+30751611 None:intergenic
AAAAGGTGGTTAGTTTGTAA+AGG 0.483159 1_3:+30752259 None:intergenic
ATGAACATCCCAGCGGCCTA+TGG 0.486250 1_3:+30751863 None:intergenic
CACCAAAAGAACCATGTTGT+CGG 0.499507 1_3:+30752301 None:intergenic
TAATGATGGGCTGTGGCCTA+AGG 0.500527 1_3:+30752342 None:intergenic
TAGTCTAGAATTGAATCCTT+AGG 0.516507 1_3:-30752358 Msa0114240:five_prime_UTR
GGGATAACTGTCCAATCCTC+TGG 0.523138 1_3:-30751545 Msa0114240:intron
GACAAATTCAAACTAATGAT+GGG 0.526569 1_3:+30752329 None:intergenic
ATATATGCATACCAGAGGAT+TGG 0.533561 1_3:+30751534 None:intergenic
GTCGCACCATTCCTCCTTAG+CGG 0.534973 1_3:+30751940 None:intergenic
GCCTGCCATGGTGGTGCCAT+AGG 0.538040 1_3:-30751879 Msa0114240:five_prime_UTR
TTAGTACATGATGTAAAGAC+TGG 0.546769 1_3:-30750505 Msa0114240:CDS
CAAGATCACGAGATTTCTCT+AGG 0.549040 1_3:+30751666 None:intergenic
TGATCTTGAGATTGATTCCG+AGG 0.550181 1_3:-30751651 Msa0114240:five_prime_UTR
AGATCTTAATAGGTTAACAT+TGG 0.555489 1_3:-30752437 Msa0114240:five_prime_UTR
AACCCATATGGTGAAGAGAA+AGG 0.556476 1_3:-30752138 Msa0114240:five_prime_UTR
TTGTTAAATGGCCGCTAAGG+AGG 0.558284 1_3:-30751951 Msa0114240:five_prime_UTR
TGGTGGTGCCATAGGCCGCT+GGG 0.558798 1_3:-30751871 Msa0114240:five_prime_UTR
ATTGGGCCAAACATTAGTCT+GGG 0.563139 1_3:+30752002 None:intergenic
AACATTTCTTTACAATACGT+TGG 0.564790 1_3:-30752165 Msa0114240:five_prime_UTR
CTACAATGTGTATAATGATA+GGG 0.566626 1_3:+30752103 None:intergenic
AGGATAAAATTGTGAATCTG+TGG 0.570840 1_3:-30750567 Msa0114240:CDS
ATAGCAATTGAACAAGGAGT+TGG 0.573691 1_3:-30750610 Msa0114240:CDS
GTGTTGTTAAATGGCCGCTA+AGG 0.575439 1_3:-30751954 Msa0114240:five_prime_UTR
TACGTTGGCAGAAACCCATA+TGG 0.582526 1_3:-30752150 Msa0114240:five_prime_UTR
AGACGAGATAATCAAATCCT+CGG 0.589811 1_3:+30751634 None:intergenic
TTCAAACTAATGATGGGCTG+TGG 0.589868 1_3:+30752335 None:intergenic
AAATGGCCGCTAAGGAGGAA+TGG 0.594581 1_3:-30751946 Msa0114240:five_prime_UTR
TGATGGCAGAATATGGAAGA+AGG 0.599247 1_3:+30751825 None:intergenic
GCATTCGTCATATACCTACT+GGG 0.609457 1_3:-30751565 Msa0114240:five_prime_UTR
GGGAAATCATGCTCTTAACA+TGG 0.617514 1_3:+30752022 None:intergenic
TTATGGATAAGAACAAGGTG+TGG 0.623574 1_3:+30750368 None:intergenic
TAGTATAAATGGTATAGTGA+AGG 0.625252 1_3:-30750587 Msa0114240:CDS
TTTGTCGTAATCCGACAACA+TGG 0.637985 1_3:-30752312 Msa0114240:five_prime_UTR
CGAGATTTCTCTAGGAACAA+CGG 0.638068 1_3:+30751674 None:intergenic
CAAGTGATAGCAATTGAACA+AGG 0.638703 1_3:-30750616 Msa0114240:CDS
AGCGGCCTATGGCACCACCA+TGG 0.639254 1_3:+30751874 None:intergenic
GGATAAAATTGTGAATCTGT+GGG 0.646737 1_3:-30750566 Msa0114240:CDS
GAATATTGGACCTCTTATTG+CGG 0.652673 1_3:-30750446 Msa0114240:CDS
GATTGGACAGTTATCCCAGT+AGG 0.654358 1_3:+30751551 None:intergenic
ATAATTTATGGATAAGAACA+AGG 0.661959 1_3:+30750363 None:intergenic
TAATGATAGGGTATGAAATG+TGG 0.668810 1_3:+30752115 None:intergenic
ATTTGTGAAGATGCCTGCCA+TGG 0.672528 1_3:-30751891 Msa0114240:five_prime_UTR
TGTGAAGATGCCTGCCATGG+TGG 0.678086 1_3:-30751888 Msa0114240:five_prime_UTR
TGTGGAAATGAACATCAACT+CGG 0.713768 1_3:+30750386 None:intergenic
CATCCATATGAACATCCCAG+CGG 0.806390 1_3:+30751856 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAGTTAATTTTATTCATTT+TGG + chr1_3:30757414-30757433 None:intergenic 10.0%
!!! TTTTTTTTTTTTCTTTGTAA+AGG - chr1_3:30757613-30757632 Msa0114240:intron 10.0%
!! ATAAGATTCAATTTAGTATT+AGG + chr1_3:30750708-30750727 None:intergenic 15.0%
!! TAAATTGAATCTTATCAATT+TGG - chr1_3:30750713-30750732 Msa0114240:intron 15.0%
!!! CATTTTTTTATAATGGATTT+AGG - chr1_3:30752160-30752179 Msa0114240:five_prime_UTR 15.0%
!!! AAACAAAATTTTCTCAAATA+TGG + chr1_3:30752974-30752993 None:intergenic 15.0%
!!! ATATTTGAGAAAATTTTGTT+TGG - chr1_3:30752973-30752992 Msa0114240:intron 15.0%
!! TTACAAAAAAATTTCAAAGT+TGG - chr1_3:30754135-30754154 Msa0114240:intron 15.0%
!! ATAAGATTCAATTTAGTATT+AGG + chr1_3:30750708-30750727 None:intergenic 15.0%
!! TTGAGTTTGTATTTATATTA+AGG - chr1_3:30756943-30756962 Msa0114240:intron 15.0%
!! CAATAATGTTTGTAATTTAA+GGG - chr1_3:30757387-30757406 Msa0114240:intron 15.0%
!! AAATCCTCATTTAAAAAAAA+AGG + chr1_3:30757577-30757596 None:intergenic 15.0%
!! TTCTTATCCATAAATTATTT+AGG - chr1_3:30757952-30757971 Msa0114240:intron 15.0%
!! ATATCATCCTAAATAATTTA+TGG + chr1_3:30757962-30757981 None:intergenic 15.0%
!!! ACTTAGTATTTTTACTTTTT+TGG - chr1_3:30757982-30758001 Msa0114240:intron 15.0%
!!! AAATCTCATAACTGATTTAA+TGG - chr1_3:30750422-30750441 Msa0114240:exon 20.0%
!!! AATCTCATAACTGATTTAAT+GGG - chr1_3:30750423-30750442 Msa0114240:CDS 20.0%
!! TAGTGAAAAAGAAAAATTCA+AGG - chr1_3:30751667-30751686 Msa0114240:five_prime_UTR 20.0%
!! AGTGAAAAAGAAAAATTCAA+GGG - chr1_3:30751668-30751687 Msa0114240:five_prime_UTR 20.0%
!! CCATTATAAAAAAATGTTCT+TGG + chr1_3:30752156-30752175 None:intergenic 20.0%
!!! CCAAGAACATTTTTTTATAA+TGG - chr1_3:30752153-30752172 Msa0114240:five_prime_UTR 20.0%
!!! TTTTTTATAATGGATTTAGG+AGG - chr1_3:30752163-30752182 Msa0114240:five_prime_UTR 20.0%
!!! TTAGAAATCTTTGTTTGAAA+TGG - chr1_3:30752245-30752264 Msa0114240:five_prime_UTR 20.0%
!!! ATCTCATTTTTTTGATAGAA+AGG + chr1_3:30752572-30752591 None:intergenic 20.0%
!! ACTTATTTATAGCAAGAATA+AGG - chr1_3:30753012-30753031 Msa0114240:intron 20.0%
!!! TTTGAAATAAAATACAAACC+TGG - chr1_3:30753715-30753734 Msa0114240:intron 20.0%
!! TTGAAATAAAATACAAACCT+GGG - chr1_3:30753716-30753735 Msa0114240:intron 20.0%
!!! AATTTTTTTGTAAGTTCGTA+AGG + chr1_3:30754128-30754147 None:intergenic 20.0%
!!! AAATCTCATAACTGATTTAA+TGG - chr1_3:30750422-30750441 Msa0114240:exon 20.0%
!!! AATCTCATAACTGATTTAAT+GGG - chr1_3:30750423-30750442 Msa0114240:CDS 20.0%
!!! TGTAATTGTTGTTTAACTTA+TGG + chr1_3:30755854-30755873 None:intergenic 20.0%
!! GAAATTGAATTTACTCAAAA+AGG + chr1_3:30756071-30756090 None:intergenic 20.0%
!! ATACAGTTCAAAACATATAT+AGG - chr1_3:30756117-30756136 Msa0114240:intron 20.0%
!! CTCTTAAAGATAGAAAAATT+GGG + chr1_3:30756328-30756347 None:intergenic 20.0%
!! GAAACCTAAAAATAACTTAA+GGG + chr1_3:30756987-30757006 None:intergenic 20.0%
!!! TAAGTTTTCTTGTTTCATTT+TGG + chr1_3:30757361-30757380 None:intergenic 20.0%
!! AATGAAACAAGAAAACTTAA+AGG - chr1_3:30757362-30757381 Msa0114240:intron 20.0%
!! CCTTAAATTACAAACATTAT+TGG + chr1_3:30757389-30757408 None:intergenic 20.0%
!! CCAATAATGTTTGTAATTTA+AGG - chr1_3:30757386-30757405 Msa0114240:intron 20.0%
!!! AAGTCCTTTTTTTTTAAATG+AGG - chr1_3:30757570-30757589 Msa0114240:intron 20.0%
!!! ATCTAAATAGTGTTTTAGAT+GGG - chr1_3:30757842-30757861 Msa0114240:intron 20.0%
!! ATAATTTATGGATAAGAACA+AGG + chr1_3:30757950-30757969 None:intergenic 20.0%
! TCAATGTGATGTATTGAAAT+CGG + chr1_3:30750285-30750304 None:intergenic 25.0%
!!! GTTTTGAGAGAATCTATAAA+AGG - chr1_3:30750307-30750326 Msa0114240:three_prime_UTR 25.0%
! AGAATCTATAAAAGGAAACA+AGG - chr1_3:30750315-30750334 Msa0114240:three_prime_UTR 25.0%
! GAATCTATAAAAGGAAACAA+GGG - chr1_3:30750316-30750335 Msa0114240:three_prime_UTR 25.0%
!! ATCTCATAACTGATTTAATG+GGG - chr1_3:30750424-30750443 Msa0114240:CDS 25.0%
! GTAAAATTCTGATGAGAAAA+GGG + chr1_3:30750676-30750695 None:intergenic 25.0%
! AGTAAAATTCTGATGAGAAA+AGG + chr1_3:30750677-30750696 None:intergenic 25.0%
!! AAGATATTTTCGATTAAACG+AGG - chr1_3:30751151-30751170 Msa0114240:intron 25.0%
!!! TTGGACTCTATTTTTTTGAA+TGG - chr1_3:30751434-30751453 Msa0114240:intron 25.0%
!!! TGGACTCTATTTTTTTGAAT+GGG - chr1_3:30751435-30751454 Msa0114240:intron 25.0%
!!! TATTTTTTTGAATGGGTTGA+AGG - chr1_3:30751442-30751461 Msa0114240:intron 25.0%
! AATGAGATTGTAATGAGAAA+AGG - chr1_3:30751548-30751567 Msa0114240:five_prime_UTR 25.0%
! GTGAAAAAGAAAAATTCAAG+GGG - chr1_3:30751669-30751688 Msa0114240:five_prime_UTR 25.0%
!! TCTTTGTTTGAAATGGAATA+AGG - chr1_3:30752252-30752271 Msa0114240:five_prime_UTR 25.0%
!!! ATGAAAGCTATTTCTATTGA+AGG - chr1_3:30752344-30752363 Msa0114240:five_prime_UTR 25.0%
!!! TGAAAGCTATTTCTATTGAA+GGG - chr1_3:30752345-30752364 Msa0114240:five_prime_UTR 25.0%
! ATTCAGAATTGTTAACTGAA+TGG - chr1_3:30752417-30752436 Msa0114240:five_prime_UTR 25.0%
! TTCAGAATTGTTAACTGAAT+GGG - chr1_3:30752418-30752437 Msa0114240:five_prime_UTR 25.0%
! TGATAGAAAGGATATCTATA+GGG + chr1_3:30752560-30752579 None:intergenic 25.0%
! TTGATAGAAAGGATATCTAT+AGG + chr1_3:30752561-30752580 None:intergenic 25.0%
! ACTCTTCAATAATAGGAATA+GGG + chr1_3:30752751-30752770 None:intergenic 25.0%
! AACTCTTCAATAATAGGAAT+AGG + chr1_3:30752752-30752771 None:intergenic 25.0%
! ATTAAAGCTTGAAATGTTGA+CGG + chr1_3:30752935-30752954 None:intergenic 25.0%
! CTTAAACCTTTCAAATTTGT+GGG + chr1_3:30753217-30753236 None:intergenic 25.0%
! CACAAATTTGAAAGGTTTAA+GGG - chr1_3:30753216-30753235 Msa0114240:intron 25.0%
! ACAAATTTGAAAGGTTTAAG+GGG - chr1_3:30753217-30753236 Msa0114240:intron 25.0%
!!! AAATTTCAAAGTTGGTGTAT+TGG - chr1_3:30754143-30754162 Msa0114240:intron 25.0%
!!! AATTTCAAAGTTGGTGTATT+GGG - chr1_3:30754144-30754163 Msa0114240:intron 25.0%
!! AATTTGGAATGACATTTCTA+TGG - chr1_3:30754282-30754301 Msa0114240:intron 25.0%
!! GACATTTCTATGGATTTTAT+TGG - chr1_3:30754292-30754311 Msa0114240:intron 25.0%
!! ATTTCTATGGATTTTATTGG+AGG - chr1_3:30754295-30754314 Msa0114240:intron 25.0%
!!! AAGTTTTTTTGAGCAATTTC+TGG - chr1_3:30754494-30754513 Msa0114240:intron 25.0%
!! ACCTTATAAGTTGAAGAAAT+TGG - chr1_3:30754948-30754967 Msa0114240:intron 25.0%
!!! GTTTTGAGAGAATCTATAAA+AGG - chr1_3:30750307-30750326 Msa0114240:three_prime_UTR 25.0%
! AGAATCTATAAAAGGAAACA+AGG - chr1_3:30750315-30750334 Msa0114240:three_prime_UTR 25.0%
! GAATCTATAAAAGGAAACAA+GGG - chr1_3:30750316-30750335 Msa0114240:three_prime_UTR 25.0%
!! ATCTCATAACTGATTTAATG+GGG - chr1_3:30750424-30750443 Msa0114240:CDS 25.0%
! GTAAAATTCTGATGAGAAAA+GGG + chr1_3:30750676-30750695 None:intergenic 25.0%
! AGTAAAATTCTGATGAGAAA+AGG + chr1_3:30750677-30750696 None:intergenic 25.0%
! CAACAATTACAGATCTTAAT+AGG - chr1_3:30755863-30755882 Msa0114240:intron 25.0%
! AGATCTTAATAGGTTAACAT+TGG - chr1_3:30755873-30755892 Msa0114240:intron 25.0%
! GACAAATTCAAACTAATGAT+GGG + chr1_3:30755984-30756003 None:intergenic 25.0%
! ATTGAATTTACTCAAAAAGG+TGG + chr1_3:30756068-30756087 None:intergenic 25.0%
! AACATTTCTTTACAATACGT+TGG - chr1_3:30756145-30756164 Msa0114240:intron 25.0%
! CTACAATGTGTATAATGATA+GGG + chr1_3:30756210-30756229 None:intergenic 25.0%
! TCTACAATGTGTATAATGAT+AGG + chr1_3:30756211-30756230 None:intergenic 25.0%
! CCTCTTAAAGATAGAAAAAT+TGG + chr1_3:30756329-30756348 None:intergenic 25.0%
!! CCAATTTTTCTATCTTTAAG+AGG - chr1_3:30756326-30756345 Msa0114240:intron 25.0%
!! ATGTTCATATGGATGATTTT+TGG - chr1_3:30756462-30756481 Msa0114240:intron 25.0%
!!! CAAGTTTTTTAAGTGTTTGT+AGG - chr1_3:30756520-30756539 Msa0114240:intron 25.0%
! TAGGCTAATGAATTATAGTA+TGG - chr1_3:30756539-30756558 Msa0114240:intron 25.0%
! TATAGTATGGTATAGATGTT+TGG - chr1_3:30756552-30756571 Msa0114240:intron 25.0%
! GGACTTGAATATAGAATAAA+CGG + chr1_3:30756848-30756867 None:intergenic 25.0%
!!! TGTTCCCTTAAGTTATTTTT+AGG - chr1_3:30756980-30756999 Msa0114240:intron 25.0%
! CGAAACCTAAAAATAACTTA+AGG + chr1_3:30756988-30757007 None:intergenic 25.0%
!!! GTTATTTTTAGGTTTCGTTT+TGG - chr1_3:30756991-30757010 Msa0114240:intron 25.0%
!! TTGTATAACGTTTGTTACTT+AGG + chr1_3:30757049-30757068 None:intergenic 25.0%
! GTAACAAACGTTATACAAAT+TGG - chr1_3:30757051-30757070 Msa0114240:intron 25.0%
! ATGAAACGAAAACAACTTAA+GGG + chr1_3:30757078-30757097 None:intergenic 25.0%
!! AATTATCTCTGGTGTTAATT+TGG + chr1_3:30757240-30757259 None:intergenic 25.0%
!! CCTTTAAGTAACAAATTTTG+TGG + chr1_3:30757311-30757330 None:intergenic 25.0%
!!! CCACAAAATTTGTTACTTAA+AGG - chr1_3:30757308-30757327 Msa0114240:intron 25.0%
! CTTGTATTAATTTCACTCAT+GGG - chr1_3:30757457-30757476 Msa0114240:intron 25.0%
! TAGTATAAATGGTATAGTGA+AGG - chr1_3:30757723-30757742 Msa0114240:intron 25.0%
!!! GATCTAAATAGTGTTTTAGA+TGG - chr1_3:30757841-30757860 Msa0114240:intron 25.0%
! AGTAAATCCTAAAAATTTGC+TGG + chr1_3:30758009-30758028 None:intergenic 25.0%
! TAGGATTTACTTCAATTCTT+TGG - chr1_3:30758018-30758037 Msa0114240:intron 25.0%
! TAACAAAAATATGTCAGTAC+AGG + chr1_3:30758085-30758104 None:intergenic 25.0%
! ACGTTACTGTATTCTTAATT+TGG - chr1_3:30758120-30758139 Msa0114240:five_prime_UTR 25.0%
GAATCAAAACAATAATGCAG+AGG - chr1_3:30750353-30750372 Msa0114240:three_prime_UTR 30.0%
! TCTCATAACTGATTTAATGG+GGG - chr1_3:30750425-30750444 Msa0114240:CDS 30.0%
! ATCTGATGGATATATAGAGA+AGG - chr1_3:30750467-30750486 Msa0114240:CDS 30.0%
! AGGAAAGTTCAGTATTGAAA+TGG - chr1_3:30750487-30750506 Msa0114240:CDS 30.0%
! AAAGTTCAGTATTGAAATGG+AGG - chr1_3:30750490-30750509 Msa0114240:CDS 30.0%
CAGAAAAATAAAGATAGCCT+AGG + chr1_3:30750567-30750586 None:intergenic 30.0%
TGATTACAATGGTTGAACAA+CGG + chr1_3:30750603-30750622 None:intergenic 30.0%
! GATCTAACTGTTGATTACAA+TGG + chr1_3:30750614-30750633 None:intergenic 30.0%
AATCCAGTTAGAGTTCAAAT+GGG + chr1_3:30750636-30750655 None:intergenic 30.0%
TAATCCAGTTAGAGTTCAAA+TGG + chr1_3:30750637-30750656 None:intergenic 30.0%
CCATAATTTCTGCTAAATCA+TGG + chr1_3:30751502-30751521 None:intergenic 30.0%
CCATGATTTAGCAGAAATTA+TGG - chr1_3:30751499-30751518 Msa0114240:intron 30.0%
ATTTAGCAGAAATTATGGAC+AGG - chr1_3:30751504-30751523 Msa0114240:intron 30.0%
TTTAGCAGAAATTATGGACA+GGG - chr1_3:30751505-30751524 Msa0114240:intron 30.0%
AGATTTCATTGGAGTTAAGA+AGG - chr1_3:30751619-30751638 Msa0114240:five_prime_UTR 30.0%
AAAAAGAAAAATTCAAGGGG+AGG - chr1_3:30751672-30751691 Msa0114240:five_prime_UTR 30.0%
TTTCAAATGTGGAGAGAAAT+GGG - chr1_3:30751742-30751761 Msa0114240:five_prime_UTR 30.0%
AGTTCAAACACATGAAATTG+AGG - chr1_3:30751783-30751802 Msa0114240:five_prime_UTR 30.0%
AAGTAGTGATGAAGAAATAG+AGG - chr1_3:30751817-30751836 Msa0114240:five_prime_UTR 30.0%
TGAAGAAATAGAGGAATTGA+AGG - chr1_3:30751826-30751845 Msa0114240:five_prime_UTR 30.0%
GAAGAAATAGAGGAATTGAA+GGG - chr1_3:30751827-30751846 Msa0114240:five_prime_UTR 30.0%
CACTTCAAACAAATCTTTCA+AGG - chr1_3:30751925-30751944 Msa0114240:five_prime_UTR 30.0%
AGGATTAAAATTCACCATTC+AGG - chr1_3:30752120-30752139 Msa0114240:five_prime_UTR 30.0%
! TGTTTGAAATGGAATAAGGA+AGG - chr1_3:30752256-30752275 Msa0114240:five_prime_UTR 30.0%
!! GGTAAGAAGTATCATATTCA+AGG - chr1_3:30752277-30752296 Msa0114240:five_prime_UTR 30.0%
! CTTATTTAAAGCTCTGTAGT+CGG + chr1_3:30752708-30752727 None:intergenic 30.0%
TTATCATCAGATCAGAATGA+AGG - chr1_3:30752826-30752845 Msa0114240:intron 30.0%
GAACCATTAATATTTCTCTC+AGG + chr1_3:30753054-30753073 None:intergenic 30.0%
TCCTAAAAAGATAGAAGACA+TGG - chr1_3:30753177-30753196 Msa0114240:intron 30.0%
! ACCATGTCTTCTATCTTTTT+AGG + chr1_3:30753181-30753200 None:intergenic 30.0%
AGATAGAAGACATGGTAAAA+TGG - chr1_3:30753185-30753204 Msa0114240:intron 30.0%
CCTTAAACCTTTCAAATTTG+TGG + chr1_3:30753218-30753237 None:intergenic 30.0%
CCACAAATTTGAAAGGTTTA+AGG - chr1_3:30753215-30753234 Msa0114240:intron 30.0%
!!! AAAGGTTTAAGGGGTTTTTT+GGG - chr1_3:30753226-30753245 Msa0114240:intron 30.0%
!!! TGAAGAAAGATAGTTTTGTC+TGG - chr1_3:30753317-30753336 Msa0114240:intron 30.0%
ACAAACTCCTTATCAAAATC+AGG + chr1_3:30753412-30753431 None:intergenic 30.0%
!! TGATTTTGATAAGGAGTTTG+TGG - chr1_3:30753411-30753430 Msa0114240:intron 30.0%
!! CTCATAAACTGACTTCTTTT+GGG + chr1_3:30753530-30753549 None:intergenic 30.0%
!! TCTCATAAACTGACTTCTTT+TGG + chr1_3:30753531-30753550 None:intergenic 30.0%
AAAAGAAGTCAGTTTATGAG+AGG - chr1_3:30753530-30753549 Msa0114240:intron 30.0%
AAAGAAGTCAGTTTATGAGA+GGG - chr1_3:30753531-30753550 Msa0114240:intron 30.0%
TTTCTGTATAGCTATCACAA+TGG + chr1_3:30753566-30753585 None:intergenic 30.0%
TTGTGATAGCTATACAGAAA+TGG - chr1_3:30753566-30753585 Msa0114240:intron 30.0%
AAACTTCAAACTCTTCTGAT+CGG + chr1_3:30753629-30753648 None:intergenic 30.0%
TATTACAGAACAACGAACTA+TGG - chr1_3:30753648-30753667 Msa0114240:intron 30.0%
ATTACAGAACAACGAACTAT+GGG - chr1_3:30753649-30753668 Msa0114240:intron 30.0%
! AAGTGGATTTCAAAGTTGTT+GGG - chr1_3:30753685-30753704 Msa0114240:intron 30.0%
AATAAAATACAAACCTGGGA+AGG - chr1_3:30753720-30753739 Msa0114240:intron 30.0%
TGATGAGAAGTTAAAAGCTA+TGG - chr1_3:30753943-30753962 Msa0114240:intron 30.0%
GTGGAAGATTATTTCATGAA+GGG - chr1_3:30754017-30754036 Msa0114240:intron 30.0%
AAGATTATTTCATGAAGGGA+GGG - chr1_3:30754021-30754040 Msa0114240:intron 30.0%
ATGTCATTCCAAATTTGAGT+GGG + chr1_3:30754277-30754296 None:intergenic 30.0%
AATGTCATTCCAAATTTGAG+TGG + chr1_3:30754278-30754297 None:intergenic 30.0%
CATAGCTGAATTATTCATCA+AGG - chr1_3:30754420-30754439 Msa0114240:intron 30.0%
! ACATATTTGAGATGTTTGAC+TGG - chr1_3:30754616-30754635 Msa0114240:intron 30.0%
! CATATTTGAGATGTTTGACT+GGG - chr1_3:30754617-30754636 Msa0114240:intron 30.0%
TTCAAATGGAGTTGTCTTTA+AGG + chr1_3:30754713-30754732 None:intergenic 30.0%
GCCAATTTCTTCAACTTATA+AGG + chr1_3:30754952-30754971 None:intergenic 30.0%
TTCAGGTAGTTTCAACTTAT+AGG + chr1_3:30755049-30755068 None:intergenic 30.0%
AATAATGATGCATGAAACAC+TGG + chr1_3:30755087-30755106 None:intergenic 30.0%
GAATCAAAACAATAATGCAG+AGG - chr1_3:30750353-30750372 Msa0114240:three_prime_UTR 30.0%
! TCTCATAACTGATTTAATGG+GGG - chr1_3:30750425-30750444 Msa0114240:CDS 30.0%
! ATCTGATGGATATATAGAGA+AGG - chr1_3:30750467-30750486 Msa0114240:CDS 30.0%
! AGGAAAGTTCAGTATTGAAA+TGG - chr1_3:30750487-30750506 Msa0114240:CDS 30.0%
! AAAGTTCAGTATTGAAATGG+AGG - chr1_3:30750490-30750509 Msa0114240:CDS 30.0%
CAGAAAAATAAAGATAGCCT+AGG + chr1_3:30750567-30750586 None:intergenic 30.0%
TGATTACAATGGTTGAACAA+CGG + chr1_3:30750603-30750622 None:intergenic 30.0%
! GATCTAACTGTTGATTACAA+TGG + chr1_3:30750614-30750633 None:intergenic 30.0%
AATCCAGTTAGAGTTCAAAT+GGG + chr1_3:30750636-30750655 None:intergenic 30.0%
TAATCCAGTTAGAGTTCAAA+TGG + chr1_3:30750637-30750656 None:intergenic 30.0%
TTGTGCAATTTCTTGCTAAA+AGG + chr1_3:30755923-30755942 None:intergenic 30.0%
! TAGTCTAGAATTGAATCCTT+AGG - chr1_3:30755952-30755971 Msa0114240:intron 30.0%
CGACAAATTCAAACTAATGA+TGG + chr1_3:30755985-30756004 None:intergenic 30.0%
!! AAAAGGTGGTTAGTTTGTAA+AGG + chr1_3:30756054-30756073 None:intergenic 30.0%
ATTCAATTTCGTTCAGCTAT+AGG - chr1_3:30756081-30756100 Msa0114240:intron 30.0%
TAATGATAGGGTATGAAATG+TGG + chr1_3:30756198-30756217 None:intergenic 30.0%
TTATACATTACATGCAGGTT+AGG + chr1_3:30756234-30756253 None:intergenic 30.0%
! CCATTTTATACATTACATGC+AGG + chr1_3:30756239-30756258 None:intergenic 30.0%
CCTGCATGTAATGTATAAAA+TGG - chr1_3:30756236-30756255 Msa0114240:intron 30.0%
GCATCTTCACAAATTGTTTA+TGG + chr1_3:30756413-30756432 None:intergenic 30.0%
ATATGACGAATGCAAACTAT+AGG + chr1_3:30756738-30756757 None:intergenic 30.0%
TCAATTTCATTTGCAAGTTC+TGG + chr1_3:30756876-30756895 None:intergenic 30.0%
GAAATAGTAGCAGTCATATA+AGG + chr1_3:30756903-30756922 None:intergenic 30.0%
! ACTGCTACTATTTCCTTTTT+AGG - chr1_3:30756909-30756928 Msa0114240:intron 30.0%
GTGAAACAAAACAGACTTAA+GGG + chr1_3:30757018-30757037 None:intergenic 30.0%
TGTGAAACAAAACAGACTTA+AGG + chr1_3:30757019-30757038 None:intergenic 30.0%
GATGAAACGAAAACAACTTA+AGG + chr1_3:30757079-30757098 None:intergenic 30.0%
ATCTCTTAAGATTTGAGTGT+TGG - chr1_3:30757102-30757121 Msa0114240:intron 30.0%
TAAGAAATATTGGTCCTGAT+AGG - chr1_3:30757157-30757176 Msa0114240:intron 30.0%
!! AAATTTTGTGGTGTTAGCTT+GGG + chr1_3:30757299-30757318 None:intergenic 30.0%
! ACAAGGCTAAATTACACTTT+TGG + chr1_3:30757442-30757461 None:intergenic 30.0%
CCATGAGTGAAATTAATACA+AGG + chr1_3:30757459-30757478 None:intergenic 30.0%
CCTTGTATTAATTTCACTCA+TGG - chr1_3:30757456-30757475 Msa0114240:intron 30.0%
AAATCCATTGATAGGATCAT+AGG - chr1_3:30757534-30757553 Msa0114240:intron 30.0%
! CTTTCATCTTATTTGCAAAC+TGG + chr1_3:30757648-30757667 None:intergenic 30.0%
AGGATAAAATTGTGAATCTG+TGG - chr1_3:30757743-30757762 Msa0114240:intron 30.0%
GGATAAAATTGTGAATCTGT+GGG - chr1_3:30757744-30757763 Msa0114240:intron 30.0%
! ACATCATGTACTAACTTGTA+TGG + chr1_3:30757799-30757818 None:intergenic 30.0%
TTAGTACATGATGTAAAGAC+TGG - chr1_3:30757805-30757824 Msa0114240:intron 30.0%
!! AGTGTTTTAGATGGGAATAT+TGG - chr1_3:30757850-30757869 Msa0114240:intron 30.0%
! TTTTGGTCCAGCAAATTTTT+AGG - chr1_3:30757999-30758018 Msa0114240:intron 30.0%
GGATCAAAACAATAATGCAG+AGG - chr1_3:30750374-30750393 Msa0114240:three_prime_UTR 35.0%
GTTGTTCCAAAACCAATTGA+CGG + chr1_3:30750857-30750876 None:intergenic 35.0%
!!! AGATCGGAATTTTGATGATG+AGG - chr1_3:30750974-30750993 Msa0114240:intron 35.0%
! TTTTGCCTTAAGCTGAGTAA+TGG + chr1_3:30751341-30751360 None:intergenic 35.0%
ATTACTCAGCTTAAGGCAAA+AGG - chr1_3:30751340-30751359 Msa0114240:intron 35.0%
TTACTCAGCTTAAGGCAAAA+GGG - chr1_3:30751341-30751360 Msa0114240:intron 35.0%
AAGAGAAGAGAGAGTTATGT+TGG - chr1_3:30751415-30751434 Msa0114240:intron 35.0%
!!! TTTTTTGAATGGGTTGAAGG+AGG - chr1_3:30751445-30751464 Msa0114240:intron 35.0%
TAACTCCAATGAAATCTCCA+GGG + chr1_3:30751616-30751635 None:intergenic 35.0%
TTAACTCCAATGAAATCTCC+AGG + chr1_3:30751617-30751636 None:intergenic 35.0%
TTCATTGGAGTTAAGAAGGA+AGG - chr1_3:30751623-30751642 Msa0114240:five_prime_UTR 35.0%
TCATTGGAGTTAAGAAGGAA+GGG - chr1_3:30751624-30751643 Msa0114240:five_prime_UTR 35.0%
TTCTCTCTTCTAACTCTGAT+GGG + chr1_3:30751706-30751725 None:intergenic 35.0%
TTAGAAGAGAGAAGCAAGAA+GGG - chr1_3:30751713-30751732 Msa0114240:five_prime_UTR 35.0%
AAGGGACTATGTTTCAAATG+TGG - chr1_3:30751731-30751750 Msa0114240:five_prime_UTR 35.0%
GTTTCAAATGTGGAGAGAAA+TGG - chr1_3:30751741-30751760 Msa0114240:five_prime_UTR 35.0%
TTCAAATGTGGAGAGAAATG+GGG - chr1_3:30751743-30751762 Msa0114240:five_prime_UTR 35.0%
CAAACAAATCTTTCAAGGTG+CGG - chr1_3:30751930-30751949 Msa0114240:five_prime_UTR 35.0%
AAACAAATCTTTCAAGGTGC+GGG - chr1_3:30751931-30751950 Msa0114240:five_prime_UTR 35.0%
TTTGGTAGAGATAAAGTTGC+TGG + chr1_3:30752005-30752024 None:intergenic 35.0%
CAACTTTATCTCTACCAAAC+TGG - chr1_3:30752006-30752025 Msa0114240:five_prime_UTR 35.0%
ATTTCCTACCTCAATGACAT+AGG + chr1_3:30752068-30752087 None:intergenic 35.0%
TATGTCATTGAGGTAGGAAA+TGG - chr1_3:30752067-30752086 Msa0114240:five_prime_UTR 35.0%
TTGGAATTCAACATCCTGAA+TGG + chr1_3:30752137-30752156 None:intergenic 35.0%
!! GCTATTTCTATTGAAGGGTT+AGG - chr1_3:30752350-30752369 Msa0114240:five_prime_UTR 35.0%
! AGGATTTTATGTGCATTCTG+TGG - chr1_3:30752370-30752389 Msa0114240:five_prime_UTR 35.0%
! ATTTTATGTGCATTCTGTGG+AGG - chr1_3:30752373-30752392 Msa0114240:five_prime_UTR 35.0%
! TTTTATGTGCATTCTGTGGA+GGG - chr1_3:30752374-30752393 Msa0114240:five_prime_UTR 35.0%
CTTCAAATTCCCCAATAATC+TGG + chr1_3:30752445-30752464 None:intergenic 35.0%
CAGGTTTCAACATAATAGCA+TGG + chr1_3:30752514-30752533 None:intergenic 35.0%
TATCTATAGGGTCTCAAGTT+AGG + chr1_3:30752548-30752567 None:intergenic 35.0%
TGAGATAGAAAAGATCGTCA+AGG - chr1_3:30752586-30752605 Msa0114240:intron 35.0%
!! CGACTACAGAGCTTTAAATA+AGG - chr1_3:30752706-30752725 Msa0114240:intron 35.0%
! ATAGGAATAGGGAACTTGTT+GGG + chr1_3:30752740-30752759 None:intergenic 35.0%
AATAGGAATAGGGAACTTGT+TGG + chr1_3:30752741-30752760 None:intergenic 35.0%
TCCTATTATTGAAGAGTTGC+TGG - chr1_3:30752754-30752773 Msa0114240:intron 35.0%
TCCAGCAACTCTTCAATAAT+AGG + chr1_3:30752758-30752777 None:intergenic 35.0%
! TCTAAGCTAGATTTGAAGTC+AGG - chr1_3:30752803-30752822 Msa0114240:intron 35.0%
ATATAGCTAAGACTGCTTTC+AGG - chr1_3:30752855-30752874 Msa0114240:intron 35.0%
GCACCTGAGAGAAATATTAA+TGG - chr1_3:30753048-30753067 Msa0114240:intron 35.0%
TCTTCTTGTTAGCATACAAC+TGG + chr1_3:30753087-30753106 None:intergenic 35.0%
ACAGGATGAAATTGAGTATC+TGG - chr1_3:30753120-30753139 Msa0114240:intron 35.0%
CAGGATGAAATTGAGTATCT+GGG - chr1_3:30753121-30753140 Msa0114240:intron 35.0%
CCTTTCAAATTTGTGGGAAT+TGG + chr1_3:30753211-30753230 None:intergenic 35.0%
CCAATTCCCACAAATTTGAA+AGG - chr1_3:30753208-30753227 Msa0114240:intron 35.0%
!!! GAAAGGTTTAAGGGGTTTTT+TGG - chr1_3:30753225-30753244 Msa0114240:intron 35.0%
AGGAAGTTTGTGAAAGACTA+TGG - chr1_3:30753265-30753284 Msa0114240:intron 35.0%
GGAAGTTTGTGAAAGACTAT+GGG - chr1_3:30753266-30753285 Msa0114240:intron 35.0%
TTCTTCAGCAATTGAGTCAT+CGG + chr1_3:30753304-30753323 None:intergenic 35.0%
! TTTTGATAAGGAGTTTGTGG+TGG - chr1_3:30753414-30753433 Msa0114240:intron 35.0%
GTTTGACTCATGTAAGCTAT+TGG + chr1_3:30753493-30753512 None:intergenic 35.0%
AAATGGAGACCTTATCTCTT+AGG - chr1_3:30753583-30753602 Msa0114240:intron 35.0%
AATGGAGACCTTATCTCTTA+GGG - chr1_3:30753584-30753603 Msa0114240:intron 35.0%
TTACAGAACAACGAACTATG+GGG - chr1_3:30753650-30753669 Msa0114240:intron 35.0%
! GAAGTGGATTTCAAAGTTGT+TGG - chr1_3:30753684-30753703 Msa0114240:intron 35.0%
! AGTGGATTTCAAAGTTGTTG+GGG - chr1_3:30753686-30753705 Msa0114240:intron 35.0%
TCATCCAGGTTATCAATTGA+AGG - chr1_3:30753994-30754013 Msa0114240:intron 35.0%
CATCCAGGTTATCAATTGAA+GGG - chr1_3:30753995-30754014 Msa0114240:intron 35.0%
GGTGGAAGATTATTTCATGA+AGG - chr1_3:30754016-30754035 Msa0114240:intron 35.0%
GAAGATTATTTCATGAAGGG+AGG - chr1_3:30754020-30754039 Msa0114240:intron 35.0%
TAATTCCAAAACAATCTCCC+AGG - chr1_3:30754047-30754066 Msa0114240:intron 35.0%
TGTAATAACCAAGCAATCCT+GGG + chr1_3:30754067-30754086 None:intergenic 35.0%
ATGTAATAACCAAGCAATCC+TGG + chr1_3:30754068-30754087 None:intergenic 35.0%
TACTTCACAAGCTTGTACAT+AGG + chr1_3:30754194-30754213 None:intergenic 35.0%
TGGCAGAAAATGAGCATATT+TGG + chr1_3:30754374-30754393 None:intergenic 35.0%
GATCTGATACTATAGAGCTA+GGG + chr1_3:30754468-30754487 None:intergenic 35.0%
CTGGGTTAAAACCAAAACAA+TGG - chr1_3:30754635-30754654 Msa0114240:intron 35.0%
TGAAAGAAATGCGATGTTGA+AGG - chr1_3:30754816-30754835 Msa0114240:intron 35.0%
AGGGAAGTAGAGTATAAAGT+AGG - chr1_3:30754901-30754920 Msa0114240:intron 35.0%
AGAGTATAAAGTAGGTGACA+TGG - chr1_3:30754909-30754928 Msa0114240:intron 35.0%
TACCAGAGTTTGAGAATTCA+TGG - chr1_3:30755256-30755275 Msa0114240:intron 35.0%
ACCAGAGTTTGAGAATTCAT+GGG - chr1_3:30755257-30755276 Msa0114240:intron 35.0%
AAGTTTAGGAAAGAGTTTCC+AGG - chr1_3:30755291-30755310 Msa0114240:intron 35.0%
AGGACAAGGAGATATTTGAA+GGG - chr1_3:30755325-30755344 Msa0114240:intron 35.0%
GGATCAAAACAATAATGCAG+AGG - chr1_3:30750374-30750393 Msa0114240:three_prime_UTR 35.0%
TGATTTCCCAGACTAATGTT+TGG - chr1_3:30756302-30756321 Msa0114240:intron 35.0%
! ACTTGTAACAGTGTTGTTGA+TGG + chr1_3:30756505-30756524 None:intergenic 35.0%
AGACGAGATAATCAAATCCT+CGG + chr1_3:30756679-30756698 None:intergenic 35.0%
TTCTGTTCTCCATGAATCAA+GGG + chr1_3:30756702-30756721 None:intergenic 35.0%
TTTCTGTTCTCCATGAATCA+AGG + chr1_3:30756703-30756722 None:intergenic 35.0%
ATATATGCATACCAGAGGAT+TGG + chr1_3:30756779-30756798 None:intergenic 35.0%
!! ACTATTTCCTTTTTAGGCCA+TGG - chr1_3:30756915-30756934 Msa0114240:intron 35.0%
ATACAAACTCAACTACACCA+TGG + chr1_3:30756935-30756954 None:intergenic 35.0%
AAATATTGGTCCTGATAGGA+AGG - chr1_3:30757161-30757180 Msa0114240:intron 35.0%
! ATCTCTGGTGTTAATTTGGT+GGG + chr1_3:30757236-30757255 None:intergenic 35.0%
! TATCTCTGGTGTTAATTTGG+TGG + chr1_3:30757237-30757256 None:intergenic 35.0%
!! CAAATTTTGTGGTGTTAGCT+TGG + chr1_3:30757300-30757319 None:intergenic 35.0%
TAGCTAAGAAGGAAATCATG+AGG + chr1_3:30757504-30757523 None:intergenic 35.0%
! ATCCTATCAATGGATTTGCA+GGG + chr1_3:30757531-30757550 None:intergenic 35.0%
TAGTCCTATGATCCTATCAA+TGG + chr1_3:30757541-30757560 None:intergenic 35.0%
CAAGTGATAGCAATTGAACA+AGG - chr1_3:30757694-30757713 Msa0114240:intron 35.0%
ATAGCAATTGAACAAGGAGT+TGG - chr1_3:30757700-30757719 Msa0114240:intron 35.0%
!! CAAGGAGTTGGTAGTATAAA+TGG - chr1_3:30757712-30757731 Msa0114240:intron 35.0%
ATCTGTGGGAAGAAAAAACT+AGG - chr1_3:30757758-30757777 Msa0114240:intron 35.0%
GAATATTGGACCTCTTATTG+CGG - chr1_3:30757864-30757883 Msa0114240:intron 35.0%
TTAATATGAGCCGCAATAAG+AGG + chr1_3:30757877-30757896 None:intergenic 35.0%
TGTGGAAATGAACATCAACT+CGG + chr1_3:30757927-30757946 None:intergenic 35.0%
TTATGGATAAGAACAAGGTG+TGG + chr1_3:30757945-30757964 None:intergenic 35.0%
! TGGTGTCTTTTGACCAAAAA+AGG - chr1_3:30758038-30758057 Msa0114240:five_prime_UTR 35.0%
! GGTGTCTTTTGACCAAAAAA+GGG - chr1_3:30758039-30758058 Msa0114240:five_prime_UTR 35.0%
!!! GACGATTTGATACCCTTTTT+TGG + chr1_3:30758054-30758073 None:intergenic 35.0%
TATGTCAGTACAGGCAAAAT+TGG + chr1_3:30758076-30758095 None:intergenic 35.0%
! CATAACTGATTTAATGGGGG+AGG - chr1_3:30750428-30750447 Msa0114240:CDS 40.0%
GATCCCATTTGAACTCTAAC+TGG - chr1_3:30750630-30750649 Msa0114240:CDS 40.0%
TCAATTTGGTATCAGAGCCT+TGG - chr1_3:30750727-30750746 Msa0114240:intron 40.0%
GATGACTAACGTTGAAACGA+CGG - chr1_3:30750821-30750840 Msa0114240:intron 40.0%
ATCTGCTCAATTGTGACTTG+AGG + chr1_3:30750888-30750907 None:intergenic 40.0%
CATCAAAATTCCGATCTCTC+CGG + chr1_3:30750971-30750990 None:intergenic 40.0%
!!! CGGAATTTTGATGATGAGGA+AGG - chr1_3:30750978-30750997 Msa0114240:intron 40.0%
CCACGTCATCGTTATCAAAA+CGG - chr1_3:30751035-30751054 Msa0114240:intron 40.0%
ATTGGAGATTCCGGTGTTTA+AGG - chr1_3:30751094-30751113 Msa0114240:intron 40.0%
TTGGAGATTCCGGTGTTTAA+GGG - chr1_3:30751095-30751114 Msa0114240:intron 40.0%
TAAGATGGATGCAGTAGTGT+TGG - chr1_3:30751187-30751206 Msa0114240:intron 40.0%
!! AGTGTTGGCTATGGAAGATA+AGG - chr1_3:30751202-30751221 Msa0114240:intron 40.0%
AACCTGGAACGAGTTTAAAC+TGG - chr1_3:30751268-30751287 Msa0114240:intron 40.0%
TAATTCGTCGTTTCCAACCA+GGG - chr1_3:30751294-30751313 Msa0114240:intron 40.0%
AACTCTCTCTTCTCTTCGTA+GGG + chr1_3:30751411-30751430 None:intergenic 40.0%
TAACTCTCTCTTCTCTTCGT+AGG + chr1_3:30751412-30751431 None:intergenic 40.0%
TAATGAGAAAAGGAGCCCTA+GGG - chr1_3:30751558-30751577 Msa0114240:five_prime_UTR 40.0%
ACTTTCAGATTCAAAGACCC+TGG - chr1_3:30751596-30751615 Msa0114240:five_prime_UTR 40.0%
AAAGACCCTGGAGATTTCAT+TGG - chr1_3:30751608-30751627 Msa0114240:five_prime_UTR 40.0%
CATTGGAGTTAAGAAGGAAG+GGG - chr1_3:30751625-30751644 Msa0114240:five_prime_UTR 40.0%
AAGAAAAATTCAAGGGGAGG+AGG - chr1_3:30751675-30751694 Msa0114240:five_prime_UTR 40.0%
CTTCTCTCTTCTAACTCTGA+TGG + chr1_3:30751707-30751726 None:intergenic 40.0%
GTTAGAAGAGAGAAGCAAGA+AGG - chr1_3:30751712-30751731 Msa0114240:five_prime_UTR 40.0%
TCAAATGTGGAGAGAAATGG+GGG - chr1_3:30751744-30751763 Msa0114240:five_prime_UTR 40.0%
GAAGTGTGTAGAAGATGAAG+TGG - chr1_3:30751856-30751875 Msa0114240:five_prime_UTR 40.0%
GCTTTGCAGGGATAATTTCA+GGG + chr1_3:30751894-30751913 None:intergenic 40.0%
TGCTTTGCAGGGATAATTTC+AGG + chr1_3:30751895-30751914 None:intergenic 40.0%
TTATCCCTGCAAAGCAAAGA+AGG - chr1_3:30751899-30751918 Msa0114240:five_prime_UTR 40.0%
TATCCCTGCAAAGCAAAGAA+GGG - chr1_3:30751900-30751919 Msa0114240:five_prime_UTR 40.0%
! ACAAATTGGTGACAGACAAG+TGG - chr1_3:30751955-30751974 Msa0114240:five_prime_UTR 40.0%
!! GTGGTAACTCTCATTGATTC+TGG - chr1_3:30751974-30751993 Msa0114240:five_prime_UTR 40.0%
CTTTATCTCTACCAAACTGG+TGG - chr1_3:30752009-30752028 Msa0114240:five_prime_UTR 40.0%
TACTCCTACCTATGTCATTG+AGG - chr1_3:30752057-30752076 Msa0114240:five_prime_UTR 40.0%
CTTGCCTATTACACATAGCA+GGG + chr1_3:30752306-30752325 None:intergenic 40.0%
TGTGTAATAGGCAAGCTTCA+TGG - chr1_3:30752311-30752330 Msa0114240:five_prime_UTR 40.0%
ACTGAATGGGACCAGATTAT+TGG - chr1_3:30752431-30752450 Msa0114240:five_prime_UTR 40.0%
CTGAATGGGACCAGATTATT+GGG - chr1_3:30752432-30752451 Msa0114240:five_prime_UTR 40.0%
TGAATGGGACCAGATTATTG+GGG - chr1_3:30752433-30752452 Msa0114240:five_prime_UTR 40.0%
AAGTTAGGAATTGCAGCATC+AGG + chr1_3:30752533-30752552 None:intergenic 40.0%
TCAAGGATATGTTGCAAGCA+GGG - chr1_3:30752603-30752622 Msa0114240:intron 40.0%
AAGAGTTGCTGGATGAACTA+GGG - chr1_3:30752765-30752784 Msa0114240:intron 40.0%
! GAGTACTTAGTGATGCCTTT+TGG - chr1_3:30752896-30752915 Msa0114240:intron 40.0%
CTCAATTTCATCCTGTGCAA+AGG + chr1_3:30753116-30753135 None:intergenic 40.0%
ACTTCCTGTAATATCCAGTC+AGG + chr1_3:30753252-30753271 None:intergenic 40.0%
AAGACTATGGGAAGAAAGCT+TGG - chr1_3:30753278-30753297 Msa0114240:intron 40.0%
!!! TAGTTTTGTCTGGAGTAGTG+AGG - chr1_3:30753327-30753346 Msa0114240:intron 40.0%
ACAAGCTATGACCACAATTC+CGG - chr1_3:30753375-30753394 Msa0114240:intron 40.0%
!! GGCTATGCCTGATTTTGATA+AGG - chr1_3:30753402-30753421 Msa0114240:intron 40.0%
GAAACAGATGCTTCAGGAAA+GGG - chr1_3:30753436-30753455 Msa0114240:intron 40.0%
AGTTTATGAGAGGGAGTTGA+TGG - chr1_3:30753540-30753559 Msa0114240:intron 40.0%
AAATGCCTCCCTAAGAGATA+AGG + chr1_3:30753595-30753614 None:intergenic 40.0%
TACAGAACAACGAACTATGG+GGG - chr1_3:30753651-30753670 Msa0114240:intron 40.0%
TACCATTCAGTGTGAAGCTT+GGG - chr1_3:30753795-30753814 Msa0114240:intron 40.0%
TGATAACCTGGATGACTCAT+GGG + chr1_3:30753989-30754008 None:intergenic 40.0%
! TTGATAACCTGGATGACTCA+TGG + chr1_3:30753990-30754009 None:intergenic 40.0%
ATTATTTCATGAAGGGAGGG+TGG - chr1_3:30754024-30754043 Msa0114240:intron 40.0%
GAGTTTCATGATACAGCAGT+TGG - chr1_3:30754088-30754107 Msa0114240:intron 40.0%
TTTCATGATACAGCAGTTGG+AGG - chr1_3:30754091-30754110 Msa0114240:intron 40.0%
!! TCAAAGTTGGTGTATTGGGA+AGG - chr1_3:30754148-30754167 Msa0114240:intron 40.0%
AAGCTTGTGAAGTATGTCAG+AGG - chr1_3:30754200-30754219 Msa0114240:intron 40.0%
AAATACCAAACTCTAAGCCC+AGG - chr1_3:30754226-30754245 Msa0114240:intron 40.0%
AATACCAAACTCTAAGCCCA+GGG - chr1_3:30754227-30754246 Msa0114240:intron 40.0%
ATTCCAAATTTGAGTGGGCA+CGG + chr1_3:30754272-30754291 None:intergenic 40.0%
AAGGAAGTAGTGAGATTGCA+TGG - chr1_3:30754439-30754458 Msa0114240:intron 40.0%
CGATCTGATACTATAGAGCT+AGG + chr1_3:30754469-30754488 None:intergenic 40.0%
CTGGTCAGAGATATTCAAAC+AGG - chr1_3:30754513-30754532 Msa0114240:intron 40.0%
TCAGAGATATTCAAACAGGC+AGG - chr1_3:30754517-30754536 Msa0114240:intron 40.0%
AACCAAAACAATGGCCTAAG+TGG - chr1_3:30754644-30754663 Msa0114240:intron 40.0%
! AACCACTTAGGCCATTGTTT+TGG + chr1_3:30754649-30754668 None:intergenic 40.0%
! ACTCCATTTGAAGCCTTGTA+TGG - chr1_3:30754721-30754740 Msa0114240:intron 40.0%
CTTCCATACAAGGCTTCAAA+TGG + chr1_3:30754727-30754746 None:intergenic 40.0%
! CATTTGAAGCCTTGTATGGA+AGG - chr1_3:30754725-30754744 Msa0114240:intron 40.0%
GATGCAGGAACAATTGTTGA+AGG - chr1_3:30754840-30754859 Msa0114240:intron 40.0%
CCTTCTATGCTTATTTGCCT+GGG + chr1_3:30754884-30754903 None:intergenic 40.0%
CCAGGCAAATAAGCATAGAA+GGG - chr1_3:30754882-30754901 Msa0114240:intron 40.0%
AAGCTTAGCCCTAGATACTA+TGG - chr1_3:30754988-30755007 Msa0114240:intron 40.0%
AGCTTAGCCCTAGATACTAT+GGG - chr1_3:30754989-30755008 Msa0114240:intron 40.0%
CATATGGCCCATAGTATCTA+GGG + chr1_3:30754999-30755018 None:intergenic 40.0%
TCATATGGCCCATAGTATCT+AGG + chr1_3:30755000-30755019 None:intergenic 40.0%
!! ATCCTCTGAAGCACTTCATA+TGG + chr1_3:30755015-30755034 None:intergenic 40.0%
! TATGAAGTGCTTCAGAGGAT+AGG - chr1_3:30755015-30755034 Msa0114240:intron 40.0%
TGAAACTACCTGAAGACACT+AGG - chr1_3:30755055-30755074 Msa0114240:intron 40.0%
GAAACTACCTGAAGACACTA+GGG - chr1_3:30755056-30755075 Msa0114240:intron 40.0%
ATGATGCATGAAACACTGGA+TGG + chr1_3:30755083-30755102 None:intergenic 40.0%
TCATTCATACAAGCTGGTAG+TGG + chr1_3:30755144-30755163 None:intergenic 40.0%
!! AGGTTGAAGTACTGGTCAAA+TGG - chr1_3:30755226-30755245 Msa0114240:intron 40.0%
!! GGTTGAAGTACTGGTCAAAT+GGG - chr1_3:30755227-30755246 Msa0114240:intron 40.0%
TCCCATGAATTCTCAAACTC+TGG + chr1_3:30755261-30755280 None:intergenic 40.0%
TGAGAATTCATGGGAACTCA+TGG - chr1_3:30755266-30755285 Msa0114240:intron 40.0%
CAAATATCTCCTTGTCCTCA+AGG + chr1_3:30755323-30755342 None:intergenic 40.0%
GAGGACAAGGAGATATTTGA+AGG - chr1_3:30755324-30755343 Msa0114240:intron 40.0%
GGACAAGGAGATATTTGAAG+GGG - chr1_3:30755326-30755345 Msa0114240:intron 40.0%
GACAAGGAGATATTTGAAGG+GGG - chr1_3:30755327-30755346 Msa0114240:intron 40.0%
! CATAACTGATTTAATGGGGG+AGG - chr1_3:30750428-30750447 Msa0114240:CDS 40.0%
GATCCCATTTGAACTCTAAC+TGG - chr1_3:30750630-30750649 Msa0114240:CDS 40.0%
!! TTCAAACTAATGATGGGCTG+TGG + chr1_3:30755978-30755997 None:intergenic 40.0%
TTTGTCGTAATCCGACAACA+TGG - chr1_3:30755998-30756017 Msa0114240:intron 40.0%
! ATCCGACAACATGGTTCTTT+TGG - chr1_3:30756007-30756026 Msa0114240:intron 40.0%
CACCAAAAGAACCATGTTGT+CGG + chr1_3:30756012-30756031 None:intergenic 40.0%
AACCCATATGGTGAAGAGAA+AGG - chr1_3:30756172-30756191 Msa0114240:intron 40.0%
GGGAAATCATGCTCTTAACA+TGG + chr1_3:30756291-30756310 None:intergenic 40.0%
! ATTGGGCCAAACATTAGTCT+GGG + chr1_3:30756311-30756330 None:intergenic 40.0%
AATTGGGCCAAACATTAGTC+TGG + chr1_3:30756312-30756331 None:intergenic 40.0%
! GGCAGTGTAGTGTTGTTAAA+TGG - chr1_3:30756347-30756366 Msa0114240:intron 40.0%
TGATGGCAGAATATGGAAGA+AGG + chr1_3:30756488-30756507 None:intergenic 40.0%
!! GTGTTGTTGATGGCAGAATA+TGG + chr1_3:30756495-30756514 None:intergenic 40.0%
! CGAGATTTCTCTAGGAACAA+CGG + chr1_3:30756639-30756658 None:intergenic 40.0%
CAAGATCACGAGATTTCTCT+AGG + chr1_3:30756647-30756666 None:intergenic 40.0%
! TGATCTTGAGATTGATTCCG+AGG - chr1_3:30756659-30756678 Msa0114240:intron 40.0%
TGCATTCGTCATATACCTAC+TGG - chr1_3:30756744-30756763 Msa0114240:intron 40.0%
GCATTCGTCATATACCTACT+GGG - chr1_3:30756745-30756764 Msa0114240:intron 40.0%
CACAGATATATGCATACCAG+AGG + chr1_3:30756784-30756803 None:intergenic 40.0%
! CATTTGCAAGTTCTGGCAAA+TGG + chr1_3:30756869-30756888 None:intergenic 40.0%
AACTACACCATGGCCTAAAA+AGG + chr1_3:30756925-30756944 None:intergenic 40.0%
!! GATTTGAGTGTTGGACACTT+TGG - chr1_3:30757111-30757130 Msa0114240:intron 40.0%
ACACATTAGTCCTTCCTATC+AGG + chr1_3:30757174-30757193 None:intergenic 40.0%
GTCTCAGGTTCAATTATCTC+TGG + chr1_3:30757251-30757270 None:intergenic 40.0%
TTCCCTGCAAATCCATTGAT+AGG - chr1_3:30757526-30757545 Msa0114240:intron 40.0%
! GATCCTATCAATGGATTTGC+AGG + chr1_3:30757532-30757551 None:intergenic 40.0%
TGTGGGAAGAAAAAACTAGG+AGG - chr1_3:30757761-30757780 Msa0114240:intron 40.0%
CATGATTAGTGGGGATCTGA+TGG - chr1_3:30750453-30750472 Msa0114240:CDS 45.0%
AGTACGTAGTCTCACTACAC+TGG - chr1_3:30750518-30750537 Msa0114240:CDS 45.0%
GTACGTAGTCTCACTACACT+GGG - chr1_3:30750519-30750538 Msa0114240:CDS 45.0%
TCACTACACTGGGAGATTCT+AGG - chr1_3:30750529-30750548 Msa0114240:CDS 45.0%
CTAGGTGTCTCGAATTACCT+AGG - chr1_3:30750547-30750566 Msa0114240:CDS 45.0%
TGGTATCAGAGCCTTGGTTA+CGG - chr1_3:30750733-30750752 Msa0114240:intron 45.0%
!! GGTAAGTACGAGAAGCATCA+TGG - chr1_3:30750770-30750789 Msa0114240:intron 45.0%
!! GAGTTGATGCGATTGAACAG+AGG - chr1_3:30750799-30750818 Msa0114240:intron 45.0%
!! GCAGATCCGTCAATTGGTTT+TGG - chr1_3:30750848-30750867 Msa0114240:intron 45.0%
GTTGCTCTTGTATCAGCAGA+CGG + chr1_3:30750911-30750930 None:intergenic 45.0%
! CGACAATAGCAGAGTATCAG+AGG - chr1_3:30751004-30751023 Msa0114240:intron 45.0%
!!! CCGTTTTGATAACGATGACG+TGG + chr1_3:30751038-30751057 None:intergenic 45.0%
CGTCATCGTTATCAAAACGG+CGG - chr1_3:30751038-30751057 Msa0114240:intron 45.0%
AAGGAGGAGATTGGAGATTC+CGG - chr1_3:30751085-30751104 Msa0114240:intron 45.0%
TGGAGATTCCGGTGTTTAAG+GGG - chr1_3:30751096-30751115 Msa0114240:intron 45.0%
ATTAAACGAGGTACGTGTGC+AGG - chr1_3:30751163-30751182 Msa0114240:intron 45.0%
TGCCAGTTTAAACTCGTTCC+AGG + chr1_3:30751273-30751292 None:intergenic 45.0%
GTAATTCGTCGTTTCCAACC+AGG - chr1_3:30751293-30751312 Msa0114240:intron 45.0%
AAGCTGAGTAATGGTCCCAA+AGG + chr1_3:30751332-30751351 None:intergenic 45.0%
TGGGACCATTACTCAGCTTA+AGG - chr1_3:30751333-30751352 Msa0114240:intron 45.0%
! AAGGCAAAAGGGTACAGTGA+TGG - chr1_3:30751352-30751371 Msa0114240:intron 45.0%
! AGGGTACAGTGATGGAGTAT+AGG - chr1_3:30751360-30751379 Msa0114240:intron 45.0%
! GGGTACAGTGATGGAGTATA+GGG - chr1_3:30751361-30751380 Msa0114240:intron 45.0%
ACTCTCTCTTCTCTTCGTAG+GGG + chr1_3:30751410-30751429 None:intergenic 45.0%
GGACAGGGCTTTACTTATTG+AGG - chr1_3:30751520-30751539 Msa0114240:intron 45.0%
GTAATGAGAAAAGGAGCCCT+AGG - chr1_3:30751557-30751576 Msa0114240:five_prime_UTR 45.0%
AGTTAAGAAGGAAGGGGAGA+AGG - chr1_3:30751631-30751650 Msa0114240:five_prime_UTR 45.0%
GTTAAGAAGGAAGGGGAGAA+GGG - chr1_3:30751632-30751651 Msa0114240:five_prime_UTR 45.0%
GAACCCTTCTTTGCTTTGCA+GGG + chr1_3:30751906-30751925 None:intergenic 45.0%
TGAACCCTTCTTTGCTTTGC+AGG + chr1_3:30751907-30751926 None:intergenic 45.0%
TATCTCTACCAAACTGGTGG+AGG - chr1_3:30752012-30752031 Msa0114240:five_prime_UTR 45.0%
CCTACCTCAATGACATAGGT+AGG + chr1_3:30752064-30752083 None:intergenic 45.0%
CCTACCTATGTCATTGAGGT+AGG - chr1_3:30752061-30752080 Msa0114240:five_prime_UTR 45.0%
GGATTTAGGAGGATCTGAGA+TGG - chr1_3:30752174-30752193 Msa0114240:five_prime_UTR 45.0%
!! AGGAGGATCTGAGATGGTTT+TGG - chr1_3:30752180-30752199 Msa0114240:five_prime_UTR 45.0%
!! GGAGGATCTGAGATGGTTTT+GGG - chr1_3:30752181-30752200 Msa0114240:five_prime_UTR 45.0%
!! GAGGATCTGAGATGGTTTTG+GGG - chr1_3:30752182-30752201 Msa0114240:five_prime_UTR 45.0%
!!! ATCTGAGATGGTTTTGGGGA+TGG - chr1_3:30752186-30752205 Msa0114240:five_prime_UTR 45.0%
!!! AGATGGTTTTGGGGATGGAT+TGG - chr1_3:30752191-30752210 Msa0114240:five_prime_UTR 45.0%
!! ATGGATTGGTTAGCTGGTCT+GGG - chr1_3:30752205-30752224 Msa0114240:five_prime_UTR 45.0%
GTGACCCTGCTATGTGTAAT+AGG - chr1_3:30752299-30752318 Msa0114240:five_prime_UTR 45.0%
GCTTGCCTATTACACATAGC+AGG + chr1_3:30752307-30752326 None:intergenic 45.0%
! GACATTTTCGACATGCCATC+AGG - chr1_3:30752464-30752483 Msa0114240:five_prime_UTR 45.0%
CTGATAGGTGGTAAACCTGA+TGG + chr1_3:30752482-30752501 None:intergenic 45.0%
TGGTCATTGTCTCTGATAGG+TGG + chr1_3:30752494-30752513 None:intergenic 45.0%
GCATGGTCATTGTCTCTGAT+AGG + chr1_3:30752497-30752516 None:intergenic 45.0%
GTCAAGGATATGTTGCAAGC+AGG - chr1_3:30752602-30752621 Msa0114240:intron 45.0%
TCTTCTTCACCAGCAACACT+GGG + chr1_3:30752661-30752680 None:intergenic 45.0%
TTCTTCTTCACCAGCAACAC+TGG + chr1_3:30752662-30752681 None:intergenic 45.0%
! AGTGTTGCTGGTGAAGAAGA+AGG - chr1_3:30752661-30752680 Msa0114240:intron 45.0%
TTGCTGGTGAAGAAGAAGGA+TGG - chr1_3:30752665-30752684 Msa0114240:intron 45.0%
TGCTGGTGAAGAAGAAGGAT+GGG - chr1_3:30752666-30752685 Msa0114240:intron 45.0%
GAAGAGTTGCTGGATGAACT+AGG - chr1_3:30752764-30752783 Msa0114240:intron 45.0%
AGAGTTGCTGGATGAACTAG+GGG - chr1_3:30752766-30752785 Msa0114240:intron 45.0%
ACTGCTTTCAGGACTCATGA+AGG - chr1_3:30752866-30752885 Msa0114240:intron 45.0%
CTGCTTTCAGGACTCATGAA+GGG - chr1_3:30752867-30752886 Msa0114240:intron 45.0%
! GGAGCGTTTGTTAGACCAAA+AGG + chr1_3:30752914-30752933 None:intergenic 45.0%
!! GAAGAAGTGTTCCTTTGCAC+AGG - chr1_3:30753102-30753121 Msa0114240:intron 45.0%
TATCTGGGTCACCTCATATC+TGG - chr1_3:30753136-30753155 Msa0114240:intron 45.0%
CTACTCCTCTTCCAGATATG+AGG + chr1_3:30753150-30753169 None:intergenic 45.0%
TATGACCACAATTCCGGTGT+TGG - chr1_3:30753381-30753400 Msa0114240:intron 45.0%
AAATCAGGCATAGCCAACAC+CGG + chr1_3:30753397-30753416 None:intergenic 45.0%
GGAAACAGATGCTTCAGGAA+AGG - chr1_3:30753435-30753454 Msa0114240:intron 45.0%
! GATGCTTCAGGAAAGGGTAT+AGG - chr1_3:30753442-30753461 Msa0114240:intron 45.0%
GGAGCAGTATTAATGCAAGC+AGG - chr1_3:30753463-30753482 Msa0114240:intron 45.0%
GAGTCAAACACTGTCTGACA+AGG - chr1_3:30753504-30753523 Msa0114240:intron 45.0%
!! TCTCTTAGGGAGGCATTTCA+AGG - chr1_3:30753597-30753616 Msa0114240:intron 45.0%
! GCTGCATTATTTTCCTTCCC+AGG + chr1_3:30753736-30753755 None:intergenic 45.0%
CTACCATTCAGTGTGAAGCT+TGG - chr1_3:30753794-30753813 Msa0114240:intron 45.0%
TTCCCAAGCTTCACACTGAA+TGG + chr1_3:30753800-30753819 None:intergenic 45.0%
ATTCAGTGTGAAGCTTGGGA+AGG - chr1_3:30753799-30753818 Msa0114240:intron 45.0%
TTCAGTGTGAAGCTTGGGAA+GGG - chr1_3:30753800-30753819 Msa0114240:intron 45.0%
! GCTATGGTGCAAGCTCTAAT+AGG - chr1_3:30753959-30753978 Msa0114240:intron 45.0%
! CCACCCTTCAATTGATAACC+TGG + chr1_3:30754001-30754020 None:intergenic 45.0%
CCAGGTTATCAATTGAAGGG+TGG - chr1_3:30753998-30754017 Msa0114240:intron 45.0%
! GCAATCCTGGGAGATTGTTT+TGG + chr1_3:30754055-30754074 None:intergenic 45.0%
AACAATCTCCCAGGATTGCT+TGG - chr1_3:30754056-30754075 Msa0114240:intron 45.0%
ATACCAAACTCTAAGCCCAG+GGG - chr1_3:30754228-30754247 Msa0114240:intron 45.0%
TTCCAAATTTGAGTGGGCAC+GGG + chr1_3:30754271-30754290 None:intergenic 45.0%
GCAGGGGATTGATACTATCA+TGG - chr1_3:30754330-30754349 Msa0114240:intron 45.0%
GGGGATTGATACTATCATGG+TGG - chr1_3:30754333-30754352 Msa0114240:intron 45.0%
CTATGTCTCTAGCTGTGTAG+GGG + chr1_3:30754405-30754424 None:intergenic 45.0%
GCTATGTCTCTAGCTGTGTA+GGG + chr1_3:30754406-30754425 None:intergenic 45.0%
AGCTATGTCTCTAGCTGTGT+AGG + chr1_3:30754407-30754426 None:intergenic 45.0%
CTTATCACCCTCAGACTGAT+GGG - chr1_3:30754563-30754582 Msa0114240:intron 45.0%
AATGGCCTAAGTGGTTATCC+TGG - chr1_3:30754653-30754672 Msa0114240:intron 45.0%
ATGGCCTAAGTGGTTATCCT+GGG - chr1_3:30754654-30754673 Msa0114240:intron 45.0%
ATCTCCCTTCACTAGTACTG+GGG + chr1_3:30754755-30754774 None:intergenic 45.0%
CATCTCCCTTCACTAGTACT+GGG + chr1_3:30754756-30754775 None:intergenic 45.0%
ACATCTCCCTTCACTAGTAC+TGG + chr1_3:30754757-30754776 None:intergenic 45.0%
CTGCAGTGGAAGAAGTTAAC+AGG - chr1_3:30754785-30754804 Msa0114240:intron 45.0%
ACAAGATGTTATGAGAGCCC+AGG - chr1_3:30754864-30754883 Msa0114240:intron 45.0%
CCCAGGCAAATAAGCATAGA+AGG - chr1_3:30754881-30754900 Msa0114240:intron 45.0%
CCCTTCTATGCTTATTTGCC+TGG + chr1_3:30754885-30754904 None:intergenic 45.0%
!! ATACAAGCTGGTAGTGGTTG+GGG + chr1_3:30755138-30755157 None:intergenic 45.0%
!! CATACAAGCTGGTAGTGGTT+GGG + chr1_3:30755139-30755158 None:intergenic 45.0%
!! TCATACAAGCTGGTAGTGGT+TGG + chr1_3:30755140-30755159 None:intergenic 45.0%
TCTCTGGTCCAAAACCTTCT+CGG + chr1_3:30755190-30755209 None:intergenic 45.0%
!!! AGAAGGTTTTGGACCAGAGA+TGG - chr1_3:30755190-30755209 Msa0114240:intron 45.0%
ACATGGAGAGGTTGAAGTAC+TGG - chr1_3:30755218-30755237 Msa0114240:intron 45.0%
!! GAAGTACTGGTCAAATGGGA+AGG - chr1_3:30755231-30755250 Msa0114240:intron 45.0%
GGGAACTCATGGAGAAGTTT+AGG - chr1_3:30755277-30755296 Msa0114240:intron 45.0%
ATATCTCCTTGTCCTCAAGG+AGG + chr1_3:30755320-30755339 None:intergenic 45.0%
AAGGAGATATTTGAAGGGGG+AGG - chr1_3:30755330-30755349 Msa0114240:intron 45.0%
CATGATTAGTGGGGATCTGA+TGG - chr1_3:30750453-30750472 Msa0114240:CDS 45.0%
AGTACGTAGTCTCACTACAC+TGG - chr1_3:30750518-30750537 Msa0114240:CDS 45.0%
GTACGTAGTCTCACTACACT+GGG - chr1_3:30750519-30750538 Msa0114240:CDS 45.0%
TCACTACACTGGGAGATTCT+AGG - chr1_3:30750529-30750548 Msa0114240:CDS 45.0%
CTAGGTGTCTCGAATTACCT+AGG - chr1_3:30750547-30750566 Msa0114240:CDS 45.0%
! CGACAACATGGTTCTTTTGG+TGG - chr1_3:30756010-30756029 Msa0114240:intron 45.0%
TACGTTGGCAGAAACCCATA+TGG - chr1_3:30756160-30756179 Msa0114240:intron 45.0%
GGCCTTTCTCTTCACCATAT+GGG + chr1_3:30756177-30756196 None:intergenic 45.0%
TGGCCTTTCTCTTCACCATA+TGG + chr1_3:30756178-30756197 None:intergenic 45.0%
! GTGTTGTTAAATGGCCGCTA+AGG - chr1_3:30756356-30756375 Msa0114240:intron 45.0%
TTGTTAAATGGCCGCTAAGG+AGG - chr1_3:30756359-30756378 Msa0114240:intron 45.0%
ATTTGTGAAGATGCCTGCCA+TGG - chr1_3:30756419-30756438 Msa0114240:intron 45.0%
CATCCATATGAACATCCCAG+CGG + chr1_3:30756457-30756476 None:intergenic 45.0%
ATCTCGTCTCCCTTGATTCA+TGG - chr1_3:30756690-30756709 Msa0114240:intron 45.0%
GATTGGACAGTTATCCCAGT+AGG + chr1_3:30756762-30756781 None:intergenic 45.0%
TTGAACCTGAGACCTTGAGA+AGG - chr1_3:30757258-30757277 Msa0114240:intron 45.0%
TTGGAGTATGCTCCTTCTCA+AGG + chr1_3:30757273-30757292 None:intergenic 45.0%
! TTGAGAAGGAGCATACTCCA+AGG - chr1_3:30757272-30757291 Msa0114240:intron 45.0%
TGCAGGGAATGTAGCTAAGA+AGG + chr1_3:30757515-30757534 None:intergenic 45.0%
!! AAATAAATATTAAGAAATAT+TGG - chr1_3:30757147-30757166 Msa0114240:intron 5.0%
CACTAACGAGACCGTAACCA+AGG + chr1_3:30750747-30750766 None:intergenic 50.0%
CTTGGTTACGGTCTCGTTAG+TGG - chr1_3:30750745-30750764 Msa0114240:intron 50.0%
GTTACGGTCTCGTTAGTGGA+TGG - chr1_3:30750749-30750768 Msa0114240:intron 50.0%
GACTAACGTTGAAACGACGG+TGG - chr1_3:30750824-30750843 Msa0114240:intron 50.0%
CGTTATCAAAACGGCGGTCA+CGG - chr1_3:30751044-30751063 Msa0114240:intron 50.0%
TTACGGAGGAAGGAGGAGAT+TGG - chr1_3:30751076-30751095 Msa0114240:intron 50.0%
GGAGATTCCGGTGTTTAAGG+GGG - chr1_3:30751097-30751116 Msa0114240:intron 50.0%
GGTACGTGTGCAGGATAAGA+TGG - chr1_3:30751172-30751191 Msa0114240:intron 50.0%
!! GGATGCAGTAGTGTTGGCTA+TGG - chr1_3:30751193-30751212 Msa0114240:intron 50.0%
!! TGGAAGATAAGGCGCTGAAC+TGG - chr1_3:30751213-30751232 Msa0114240:intron 50.0%
! GCTGAACTGGTTTCAGTGGT+GGG - chr1_3:30751226-30751245 Msa0114240:intron 50.0%
AACTCGTTCCAGGTTCGCAA+TGG + chr1_3:30751263-30751282 None:intergenic 50.0%
AAAGGATTGTGCAACAGCCC+TGG + chr1_3:30751314-30751333 None:intergenic 50.0%
AGGGCTGTTGCACAATCCTT+TGG - chr1_3:30751313-30751332 Msa0114240:intron 50.0%
GGGCTGTTGCACAATCCTTT+GGG - chr1_3:30751314-30751333 Msa0114240:intron 50.0%
AATGTGGAGAGAAATGGGGG+AGG - chr1_3:30751747-30751766 Msa0114240:five_prime_UTR 50.0%
ATGTGGAGAGAAATGGGGGA+GGG - chr1_3:30751748-30751767 Msa0114240:five_prime_UTR 50.0%
TTCAAGGTGCGGGCACAAAT+TGG - chr1_3:30751941-30751960 Msa0114240:five_prime_UTR 50.0%
TGAGGTAGGAAATGGCGAGA+AGG - chr1_3:30752075-30752094 Msa0114240:five_prime_UTR 50.0%
TAGGAAATGGCGAGAAGGTG+AGG - chr1_3:30752080-30752099 Msa0114240:five_prime_UTR 50.0%
AGGAAACAGGGGGTTTGTGA+AGG - chr1_3:30752100-30752119 Msa0114240:five_prime_UTR 50.0%
!! TTGGGGATGGATTGGTTAGC+TGG - chr1_3:30752199-30752218 Msa0114240:five_prime_UTR 50.0%
!! GATGGATTGGTTAGCTGGTC+TGG - chr1_3:30752204-30752223 Msa0114240:five_prime_UTR 50.0%
! AGCAACACTGGGCTAGAGAA+GGG + chr1_3:30752650-30752669 None:intergenic 50.0%
GCTGGTGAAGAAGAAGGATG+GGG - chr1_3:30752667-30752686 Msa0114240:intron 50.0%
CTGGTGAAGAAGAAGGATGG+GGG - chr1_3:30752668-30752687 Msa0114240:intron 50.0%
TGAAGAAGAAGGATGGGGGA+TGG - chr1_3:30752672-30752691 Msa0114240:intron 50.0%
GAGTTGCTGGATGAACTAGG+GGG - chr1_3:30752767-30752786 Msa0114240:intron 50.0%
GGTCACCTCATATCTGGAAG+AGG - chr1_3:30753142-30753161 Msa0114240:intron 50.0%
TGGGCCTGACTGGATATTAC+AGG - chr1_3:30753245-30753264 Msa0114240:intron 50.0%
CATAGCCAACACCGGAATTG+TGG + chr1_3:30753389-30753408 None:intergenic 50.0%
! GTGGTGGAAACAGATGCTTC+AGG - chr1_3:30753430-30753449 Msa0114240:intron 50.0%
GGAGACCTTATCTCTTAGGG+AGG - chr1_3:30753587-30753606 Msa0114240:intron 50.0%
AGAACAACGAACTATGGGGG+AGG - chr1_3:30753654-30753673 Msa0114240:intron 50.0%
ATGCAGCAGATGCTTTGTCC+AGG - chr1_3:30753749-30753768 Msa0114240:intron 50.0%
ACAGCAGTTGGAGGTCATTC+AGG - chr1_3:30754100-30754119 Msa0114240:intron 50.0%
! TGGTGTATTGGGAAGGCATG+AGG - chr1_3:30754155-30754174 Msa0114240:intron 50.0%
TACCAAACTCTAAGCCCAGG+GGG - chr1_3:30754229-30754248 Msa0114240:intron 50.0%
GTGGTTGTAGTAATCCCCCT+GGG + chr1_3:30754246-30754265 None:intergenic 50.0%
AGTGGTTGTAGTAATCCCCC+TGG + chr1_3:30754247-30754266 None:intergenic 50.0%
TACCCGTGCCCACTCAAATT+TGG - chr1_3:30754266-30754285 Msa0114240:intron 50.0%
GCTTATCACCCTCAGACTGA+TGG - chr1_3:30754562-30754581 Msa0114240:intron 50.0%
CAGTTTGCCCATCAGTCTGA+GGG + chr1_3:30754573-30754592 None:intergenic 50.0%
TCAGTTTGCCCATCAGTCTG+AGG + chr1_3:30754574-30754593 None:intergenic 50.0%
! TCAGACTGATGGGCAAACTG+AGG - chr1_3:30754573-30754592 Msa0114240:intron 50.0%
GGCAAACTGAGGTGGTGAAT+AGG - chr1_3:30754584-30754603 Msa0114240:intron 50.0%
TCAGCCCAGGATAACCACTT+AGG + chr1_3:30754661-30754680 None:intergenic 50.0%
GGTTATCCTGGGCTGAATAC+TGG - chr1_3:30754665-30754684 Msa0114240:intron 50.0%
GTTGTACCAGTATTCAGCCC+AGG + chr1_3:30754674-30754693 None:intergenic 50.0%
! TCTCCCTTCACTAGTACTGG+GGG + chr1_3:30754754-30754773 None:intergenic 50.0%
AGATGTGAGTCTGTCTGCAG+TGG - chr1_3:30754771-30754790 Msa0114240:intron 50.0%
TGCGATGTTGAAGGAGATGC+AGG - chr1_3:30754825-30754844 Msa0114240:intron 50.0%
! GGCCATATGAAGTGCTTCAG+AGG - chr1_3:30755010-30755029 Msa0114240:intron 50.0%
TGGTTGGGGCTCAATGTTAG+GGG + chr1_3:30755124-30755143 None:intergenic 50.0%
GTGGTTGGGGCTCAATGTTA+GGG + chr1_3:30755125-30755144 None:intergenic 50.0%
AGTGGTTGGGGCTCAATGTT+AGG + chr1_3:30755126-30755145 None:intergenic 50.0%
CTCTGGTCCAAAACCTTCTC+GGG + chr1_3:30755189-30755208 None:intergenic 50.0%
GACCAGAGATGGAATGCACA+TGG - chr1_3:30755201-30755220 Msa0114240:intron 50.0%
CTCCATGTGCATTCCATCTC+TGG + chr1_3:30755206-30755225 None:intergenic 50.0%
GAGATGGAATGCACATGGAG+AGG - chr1_3:30755206-30755225 Msa0114240:intron 50.0%
GTTTCCAGGATTCCTCCTTG+AGG - chr1_3:30755305-30755324 Msa0114240:intron 50.0%
TTGTCCTCAAGGAGGAATCC+TGG + chr1_3:30755312-30755331 None:intergenic 50.0%
AGGATTCCTCCTTGAGGACA+AGG - chr1_3:30755311-30755330 Msa0114240:intron 50.0%
!! TAATGATGGGCTGTGGCCTA+AGG + chr1_3:30755971-30755990 None:intergenic 50.0%
AAATGGCCGCTAAGGAGGAA+TGG - chr1_3:30756364-30756383 Msa0114240:intron 50.0%
GGGATAACTGTCCAATCCTC+TGG - chr1_3:30756765-30756784 Msa0114240:intron 50.0%
ATGCTCCTTCTCAAGGTCTC+AGG + chr1_3:30757266-30757285 None:intergenic 50.0%
GGTGGAGCAGATCCGTCAAT+TGG - chr1_3:30750842-30750861 Msa0114240:intron 55.0%
GAACACTTGGCCGGAGAGAT+CGG - chr1_3:30750958-30750977 Msa0114240:intron 55.0%
CTCCTTCCTCCGTAAAAGCC+GGG + chr1_3:30751071-30751090 None:intergenic 55.0%
CCTCCTTCCTCCGTAAAAGC+CGG + chr1_3:30751072-30751091 None:intergenic 55.0%
GATTCCGGTGTTTAAGGGGG+AGG - chr1_3:30751100-30751119 Msa0114240:intron 55.0%
TTTAAGGGGGAGGACGCGTA+TGG - chr1_3:30751110-30751129 Msa0114240:intron 55.0%
!! AGGCGCTGAACTGGTTTCAG+TGG - chr1_3:30751222-30751241 Msa0114240:intron 55.0%
! CGCTGAACTGGTTTCAGTGG+TGG - chr1_3:30751225-30751244 Msa0114240:intron 55.0%
! GAACTGGTTTCAGTGGTGGG+AGG - chr1_3:30751229-30751248 Msa0114240:intron 55.0%
AGCAGACACCATTGCGAACC+TGG - chr1_3:30751252-30751271 Msa0114240:intron 55.0%
GATTGTGCAACAGCCCTGGT+TGG + chr1_3:30751310-30751329 None:intergenic 55.0%
ACTCCCTCTGTCTCTCCCTA+GGG + chr1_3:30751576-30751595 None:intergenic 55.0%
TACTCCCTCTGTCTCTCCCT+AGG + chr1_3:30751577-30751596 None:intergenic 55.0%
AAGAAGGAAGGGGAGAAGGG+AGG - chr1_3:30751635-30751654 Msa0114240:five_prime_UTR 55.0%
GAAGGGGAGAAGGGAGGAAT+AGG - chr1_3:30751641-30751660 Msa0114240:five_prime_UTR 55.0%
! CTCTAGCTCCTCCACCAGTT+TGG + chr1_3:30752023-30752042 None:intergenic 55.0%
TGGCGAGAAGGTGAGGAAAC+AGG - chr1_3:30752087-30752106 Msa0114240:five_prime_UTR 55.0%
GGCGAGAAGGTGAGGAAACA+GGG - chr1_3:30752088-30752107 Msa0114240:five_prime_UTR 55.0%
GCGAGAAGGTGAGGAAACAG+GGG - chr1_3:30752089-30752108 Msa0114240:five_prime_UTR 55.0%
CGAGAAGGTGAGGAAACAGG+GGG - chr1_3:30752090-30752109 Msa0114240:five_prime_UTR 55.0%
! TCTGTGGAGGGAAGCATGAG+TGG - chr1_3:30752386-30752405 Msa0114240:five_prime_UTR 55.0%
! CAGCAACACTGGGCTAGAGA+AGG + chr1_3:30752651-30752670 None:intergenic 55.0%
CTTCTCTAGCCCAGTGTTGC+TGG - chr1_3:30752649-30752668 Msa0114240:intron 55.0%
AGAAGAAGGATGGGGGATGG+AGG - chr1_3:30752675-30752694 Msa0114240:intron 55.0%
!!! AGGGGTTTTTTGGGCCTGAC+TGG - chr1_3:30753235-30753254 Msa0114240:intron 55.0%
TGGGGGAGGATCAACAGAAG+TGG - chr1_3:30753668-30753687 Msa0114240:intron 55.0%
CGTGTGATACTGCATCTGCC+TGG + chr1_3:30753770-30753789 None:intergenic 55.0%
GTGTGAAGCTTGGGAAGGGT+TGG - chr1_3:30753804-30753823 Msa0114240:intron 55.0%
AGCTTGGGAAGGGTTGGAAG+AGG - chr1_3:30753810-30753829 Msa0114240:intron 55.0%
GGAGATCCCATGAGTCATCC+AGG - chr1_3:30753980-30753999 Msa0114240:intron 55.0%
ATCCCCCTGGGCTTAGAGTT+TGG + chr1_3:30754234-30754253 None:intergenic 55.0%
ATTTGAGTGGGCACGGGTAG+TGG + chr1_3:30754265-30754284 None:intergenic 55.0%
TGGAGGTTTACCTAGAGCGC+AGG - chr1_3:30754312-30754331 Msa0114240:intron 55.0%
GGAGGTTTACCTAGAGCGCA+GGG - chr1_3:30754313-30754332 Msa0114240:intron 55.0%
GAGGTTTACCTAGAGCGCAG+GGG - chr1_3:30754314-30754333 Msa0114240:intron 55.0%
GTATCAATCCCCTGCGCTCT+AGG + chr1_3:30754325-30754344 None:intergenic 55.0%
TGTCTCTAGCTGTGTAGGGG+TGG + chr1_3:30754402-30754421 None:intergenic 55.0%
! GACTGATGGGCAAACTGAGG+TGG - chr1_3:30754576-30754595 Msa0114240:intron 55.0%
ACCCCCCCAGTACTAGTGAA+GGG - chr1_3:30754748-30754767 Msa0114240:intron 55.0%
! TCCCTTCACTAGTACTGGGG+GGG + chr1_3:30754752-30754771 None:intergenic 55.0%
! CTCCCTTCACTAGTACTGGG+GGG + chr1_3:30754753-30754772 None:intergenic 55.0%
GGATGGACCCTAGTGTCTTC+AGG + chr1_3:30755066-30755085 None:intergenic 55.0%
TCCAAAACCTTCTCGGGACC+CGG + chr1_3:30755183-30755202 None:intergenic 55.0%
GTCGCACCATTCCTCCTTAG+CGG + chr1_3:30756373-30756392 None:intergenic 55.0%
TGTGAAGATGCCTGCCATGG+TGG - chr1_3:30756422-30756441 Msa0114240:intron 55.0%
ATGAACATCCCAGCGGCCTA+TGG + chr1_3:30756450-30756469 None:intergenic 55.0%
AGGCCGCTGGGATGTTCATA+TGG - chr1_3:30756451-30756470 Msa0114240:intron 55.0%
! GTGGTGTTAGCTTGGGACCT+TGG + chr1_3:30757292-30757311 None:intergenic 55.0%
! TGGGGGAGGCGCATGATTAG+TGG - chr1_3:30750442-30750461 Msa0114240:CDS 60.0%
! GGGGGAGGCGCATGATTAGT+GGG - chr1_3:30750443-30750462 Msa0114240:CDS 60.0%
! GGGGAGGCGCATGATTAGTG+GGG - chr1_3:30750444-30750463 Msa0114240:CDS 60.0%
ACCGCGTCATCAACGACGTC+AGG - chr1_3:30750932-30750951 Msa0114240:intron 60.0%
!! CCCTGACGTCGTTGATGACG+CGG + chr1_3:30750936-30750955 None:intergenic 60.0%
CCGCGTCATCAACGACGTCA+GGG - chr1_3:30750933-30750952 Msa0114240:intron 60.0%
CGACGTCAGGGACGAACACT+TGG - chr1_3:30750945-30750964 Msa0114240:intron 60.0%
GTCAGGGACGAACACTTGGC+CGG - chr1_3:30750949-30750968 Msa0114240:intron 60.0%
! GGTCACGGTCCCGGCTTTTA+CGG - chr1_3:30751059-30751078 Msa0114240:intron 60.0%
! GTCCCGGCTTTTACGGAGGA+AGG - chr1_3:30751066-30751085 Msa0114240:intron 60.0%
! CCGGCTTTTACGGAGGAAGG+AGG - chr1_3:30751069-30751088 Msa0114240:intron 60.0%
GCGTCCTCCCCCTTAAACAC+CGG + chr1_3:30751107-30751126 None:intergenic 60.0%
GAGCCCTAGGGAGAGACAGA+GGG - chr1_3:30751570-30751589 Msa0114240:five_prime_UTR 60.0%
GGAGGAGCTAGAGCTGAGAG+TGG - chr1_3:30752030-30752049 Msa0114240:five_prime_UTR 60.0%
GGAGCTAGAGCTGAGAGTGG+TGG - chr1_3:30752033-30752052 Msa0114240:five_prime_UTR 60.0%
! GTGGAGGGAAGCATGAGTGG+AGG - chr1_3:30752389-30752408 Msa0114240:five_prime_UTR 60.0%
! CACTGGGCTAGAGAAGGGAC+TGG + chr1_3:30752645-30752664 None:intergenic 60.0%
TGGGGGGGTCCTTCCATACA+AGG + chr1_3:30754737-30754756 None:intergenic 60.0%
GACCCCCCCAGTACTAGTGA+AGG - chr1_3:30754747-30754766 Msa0114240:intron 60.0%
! ACCGGGTCCCGAGAAGGTTT+TGG - chr1_3:30755179-30755198 Msa0114240:intron 60.0%
! TGGGGGAGGCGCATGATTAG+TGG - chr1_3:30750442-30750461 Msa0114240:CDS 60.0%
! GGGGGAGGCGCATGATTAGT+GGG - chr1_3:30750443-30750462 Msa0114240:CDS 60.0%
! GGGGAGGCGCATGATTAGTG+GGG - chr1_3:30750444-30750463 Msa0114240:CDS 60.0%
CAAAACGGCGGTCACGGTCC+CGG - chr1_3:30751050-30751069 Msa0114240:intron 65.0%
! CACGGTCCCGGCTTTTACGG+AGG - chr1_3:30751062-30751081 Msa0114240:intron 65.0%
AGGGGGAGGACGCGTATGGA+TGG - chr1_3:30751114-30751133 Msa0114240:intron 65.0%
GGAGGACGCGTATGGATGGC+TGG - chr1_3:30751118-30751137 Msa0114240:intron 65.0%
GGAGCCCTAGGGAGAGACAG+AGG - chr1_3:30751569-30751588 Msa0114240:five_prime_UTR 65.0%
GCTGTGTAGGGGTGGCTCAC+TGG + chr1_3:30754394-30754413 None:intergenic 65.0%
CCTTCTCGGGACCCGGTTCT+AGG + chr1_3:30755176-30755195 None:intergenic 65.0%
CCTAGAACCGGGTCCCGAGA+AGG - chr1_3:30755173-30755192 Msa0114240:intron 65.0%
!! GCCTGCCATGGTGGTGCCAT+AGG - chr1_3:30756431-30756450 Msa0114240:intron 65.0%
GCCTATGGCACCACCATGGC+AGG + chr1_3:30756435-30756454 None:intergenic 65.0%
AGCGGCCTATGGCACCACCA+TGG + chr1_3:30756439-30756458 None:intergenic 65.0%
!! ATGGTGGTGCCATAGGCCGC+TGG - chr1_3:30756438-30756457 Msa0114240:intron 65.0%
!! TGGTGGTGCCATAGGCCGCT+GGG - chr1_3:30756439-30756458 Msa0114240:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 30750166 30758166 30750166 ID=Msa0114240;Name=Msa0114240
chr1_3 mRNA 30750166 30758166 30750166 ID=Msa0114240-mRNA-1;Parent=Msa0114240;Name=Msa0114240-mRNA-1;_AED=0.25;_eAED=0.25;_QI=1160|1|1|1|0.5|0.33|3|257|82
chr1_3 exon 30750166 30750697 30750166 ID=Msa0114240-mRNA-1:exon:10183;Parent=Msa0114240-mRNA-1
chr1_3 exon 30751546 30752545 30751546 ID=Msa0114240-mRNA-1:exon:10182;Parent=Msa0114240-mRNA-1
chr1_3 exon 30758033 30758166 30758033 ID=Msa0114240-mRNA-1:exon:10181;Parent=Msa0114240-mRNA-1
chr1_3 five_prime_UTR 30758033 30758166 30758033 ID=Msa0114240-mRNA-1:five_prime_utr;Parent=Msa0114240-mRNA-1
chr1_3 five_prime_UTR 30751546 30752545 30751546 ID=Msa0114240-mRNA-1:five_prime_utr;Parent=Msa0114240-mRNA-1
chr1_3 five_prime_UTR 30750672 30750697 30750672 ID=Msa0114240-mRNA-1:five_prime_utr;Parent=Msa0114240-mRNA-1
chr1_3 CDS 30750423 30750671 30750423 ID=Msa0114240-mRNA-1:cds;Parent=Msa0114240-mRNA-1
chr1_3 three_prime_UTR 30750166 30750422 30750166 ID=Msa0114240-mRNA-1:three_prime_utr;Parent=Msa0114240-mRNA-1
Gene Sequence

>Msa0114240

ATGAAAGCACTAAACAGATTGAAAGCTAAACTTCAAGTGATAGCAATTGAACAAGGAGTTGGTAGTATAAATGGTATAGTGAAGGATAAAATTGTGAATCTGTGGGAAGAAAAAACTAGGAGGTATGTATCTCATCCATACAAGTTAGTACATGATGTAAAGACTGGCATTGAGATGTCAGATCTAAATAGTGTTTTAGATGGGAATATTGGACCTCTTATTGCGGCTCATATTAATACTAGAGAGTAA
Protein sequence

>Msa0114240

MKALNRLKAKLQVIAIEQGVGSINGIVKDKIVNLWEEKTRRYVSHPYKLVHDVKTGIEMSDLNSVLDGNIGPLIAAHINTRE*