Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713420 | XP_003611450.2 | 86.575 | 365 | 32 | 4 | 1 | 363 | 1 | 350 | 0.0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713420 | G7JZV4 | 86.575 | 365 | 32 | 4 | 1 | 363 | 1 | 350 | 0.0 | 527 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005160 | Msa0713420 | 0.807956 | 3.922400e-50 | -8.615850e-47 |
| Msa0006050 | Msa0713420 | 0.812271 | 4.611139e-51 | -8.615850e-47 |
| Msa0009800 | Msa0713420 | 0.825365 | 4.878844e-54 | -8.615850e-47 |
| Msa0009890 | Msa0713420 | 0.832156 | 1.109825e-55 | -8.615850e-47 |
| Msa0017980 | Msa0713420 | 0.832190 | 1.089091e-55 | -8.615850e-47 |
| Msa0018010 | Msa0713420 | 0.806020 | 1.007563e-49 | -8.615850e-47 |
| Msa0018870 | Msa0713420 | 0.800033 | 1.742246e-48 | -8.615850e-47 |
| Msa0028050 | Msa0713420 | 0.814290 | 1.661096e-51 | -8.615850e-47 |
| Msa0032990 | Msa0713420 | 0.823247 | 1.535147e-53 | -8.615850e-47 |
| Msa0044250 | Msa0713420 | 0.802593 | 5.212231e-49 | -8.615850e-47 |
| Msa0044380 | Msa0713420 | 0.818519 | 1.878571e-52 | -8.615850e-47 |
| Msa0047470 | Msa0713420 | 0.830029 | 3.696126e-55 | -8.615850e-47 |
| Msa0055530 | Msa0713420 | 0.800606 | 1.331700e-48 | -8.615850e-47 |
| Msa0059590 | Msa0713420 | 0.825977 | 3.491618e-54 | -8.615850e-47 |
| Msa0065400 | Msa0713420 | 0.808973 | 2.380540e-50 | -8.615850e-47 |
| Msa0083160 | Msa0713420 | 0.829808 | 4.184223e-55 | -8.615850e-47 |
| Msa0094970 | Msa0713420 | 0.811448 | 6.967436e-51 | -8.615850e-47 |
| Msa0097730 | Msa0713420 | 0.829414 | 5.217890e-55 | -8.615850e-47 |
| Msa0098700 | Msa0713420 | 0.826935 | 2.064388e-54 | -8.615850e-47 |
| Msa0107460 | Msa0713420 | 0.818012 | 2.447231e-52 | -8.615850e-47 |
| Msa0115950 | Msa0713420 | 0.808682 | 2.747214e-50 | -8.615850e-47 |
| Msa0116950 | Msa0713420 | 0.844494 | 7.302926e-59 | -8.615850e-47 |
| Msa0606140 | Msa0713420 | 0.840761 | 7.155337e-58 | -8.615850e-47 |
| Msa0606680 | Msa0713420 | 0.805468 | 1.315849e-49 | -8.615850e-47 |
| Msa0615850 | Msa0713420 | 0.813135 | 2.983938e-51 | -8.615850e-47 |
| Msa0623270 | Msa0713420 | 0.814060 | 1.866884e-51 | -8.615850e-47 |
| Msa0625330 | Msa0713420 | 0.801664 | 8.092381e-49 | -8.615850e-47 |
| Msa0635130 | Msa0713420 | 0.823863 | 1.101747e-53 | -8.615850e-47 |
| Msa0645780 | Msa0713420 | 0.802352 | 5.844271e-49 | -8.615850e-47 |
| Msa0646390 | Msa0713420 | 0.830285 | 3.200272e-55 | -8.615850e-47 |
| Msa0647710 | Msa0713420 | 0.814119 | 1.812149e-51 | -8.615850e-47 |
| Msa0659040 | Msa0713420 | 0.800211 | 1.602766e-48 | -8.615850e-47 |
| Msa0685520 | Msa0713420 | 0.801703 | 7.946854e-49 | -8.615850e-47 |
| Msa0690530 | Msa0713420 | 0.801143 | 1.034726e-48 | -8.615850e-47 |
| Msa0690720 | Msa0713420 | 0.805151 | 1.532990e-49 | -8.615850e-47 |
| Msa0692910 | Msa0713420 | 0.809876 | 1.523571e-50 | -8.615850e-47 |
| Msa0698900 | Msa0713420 | 0.815938 | 7.154429e-52 | -8.615850e-47 |
| Msa0704990 | Msa0713420 | 0.806707 | 7.217031e-50 | -8.615850e-47 |
| Msa0705030 | Msa0713420 | 0.817970 | 2.500928e-52 | -8.615850e-47 |
| Msa0707270 | Msa0713420 | 0.803520 | 3.351884e-49 | -8.615850e-47 |
| Msa0713420 | Msa0716600 | -0.816889 | 4.381432e-52 | -8.615850e-47 |
| Msa0713420 | Msa0716670 | 0.829285 | 5.606439e-55 | -8.615850e-47 |
| Msa0713420 | Msa0734430 | 0.800150 | 1.649334e-48 | -8.615850e-47 |
| Msa0713420 | Msa0734760 | 0.833099 | 6.477360e-56 | -8.615850e-47 |
| Msa0713420 | Msa0747900 | 0.805827 | 1.105965e-49 | -8.615850e-47 |
| Msa0713420 | Msa0755570 | 0.817749 | 2.805586e-52 | -8.615850e-47 |
| Msa0713420 | Msa0772400 | 0.846188 | 2.540145e-59 | -8.615850e-47 |
| Msa0713420 | Msa0776290 | 0.811499 | 6.789346e-51 | -8.615850e-47 |
| Msa0713420 | Msa0803220 | 0.827014 | 1.976022e-54 | -8.615850e-47 |
| Msa0713420 | Msa0813630 | 0.815626 | 8.395560e-52 | -8.615850e-47 |
| Msa0713420 | Msa0814760 | 0.835433 | 1.683189e-56 | -8.615850e-47 |
| Msa0713420 | Msa0834690 | 0.812491 | 4.127850e-51 | -8.615850e-47 |
| Msa0713420 | Msa0835030 | 0.809139 | 2.193184e-50 | -8.615850e-47 |
| Msa0713420 | Msa0837590 | 0.854397 | 1.264734e-61 | -8.615850e-47 |
| Msa0713420 | Msa0841980 | 0.812034 | 5.194091e-51 | -8.615850e-47 |
| Msa0713420 | Msa0865280 | 0.812706 | 3.704489e-51 | -8.615850e-47 |
| Msa0713420 | Msa0868040 | 0.804575 | 2.022295e-49 | -8.615850e-47 |
| Msa0713420 | Msa0880170 | 0.801850 | 7.413520e-49 | -8.615850e-47 |
| Msa0713420 | Msa0910650 | 0.825774 | 3.902850e-54 | -8.615850e-47 |
| Msa0713420 | Msa0931730 | 0.803787 | 2.950178e-49 | -8.615850e-47 |
| Msa0713420 | Msa0934830 | 0.827733 | 1.329063e-54 | -8.615850e-47 |
| Msa0713420 | Msa0946300 | 0.805958 | 1.038025e-49 | -8.615850e-47 |
| Msa0713420 | Msa0959970 | 0.813119 | 3.007769e-51 | -8.615850e-47 |
| Msa0713420 | Msa0971860 | 0.808278 | 3.350987e-50 | -8.615850e-47 |
| Msa0713420 | Msa0985570 | 0.804055 | 2.595318e-49 | -8.615850e-47 |
| Msa0713420 | Msa1029320 | 0.817046 | 4.039049e-52 | -8.615850e-47 |
| Msa0713420 | Msa1029430 | 0.828670 | 7.901516e-55 | -8.615850e-47 |
| Msa0713420 | Msa1068290 | 0.831619 | 1.506668e-55 | -8.615850e-47 |
| Msa0713420 | Msa1070900 | 0.809542 | 1.797500e-50 | -8.615850e-47 |
| Msa0713420 | Msa1074630 | 0.804330 | 2.275423e-49 | -8.615850e-47 |
| Msa0713420 | Msa1081850 | 0.821144 | 4.720420e-53 | -8.615850e-47 |
| Msa0713420 | Msa1090230 | 0.848550 | 5.708081e-60 | -8.615850e-47 |
| Msa0713420 | Msa1102180 | 0.842082 | 3.213530e-58 | -8.615850e-47 |
| Msa0713420 | Msa1102200 | 0.843625 | 1.249032e-58 | -8.615850e-47 |
| Msa0713420 | Msa1126910 | 0.800731 | 1.255855e-48 | -8.615850e-47 |
| Msa0713420 | Msa1144420 | 0.804119 | 2.517246e-49 | -8.615850e-47 |
| Msa0713420 | Msa1151120 | 0.807780 | 4.276684e-50 | -8.615850e-47 |
| Msa0713420 | Msa1166020 | 0.831147 | 1.968529e-55 | -8.615850e-47 |
| Msa0713420 | Msa1178970 | 0.815365 | 9.596494e-52 | -8.615850e-47 |
| Msa0713420 | Msa1183610 | 0.802791 | 4.744829e-49 | -8.615850e-47 |
| Msa0713420 | Msa1183730 | 0.802396 | 5.723355e-49 | -8.615850e-47 |
| Msa0713420 | Msa1184580 | 0.800127 | 1.667618e-48 | -8.615850e-47 |
| Msa0713420 | Msa1185030 | 0.810937 | 8.989789e-51 | -8.615850e-47 |
| Msa0713420 | Msa1192150 | 0.802297 | 5.998195e-49 | -8.615850e-47 |
| Msa0713420 | Msa1209390 | 0.802078 | 6.653505e-49 | -8.615850e-47 |
| Msa0713420 | Msa1209790 | 0.808514 | 2.983595e-50 | -8.615850e-47 |
| Msa0713420 | Msa1218720 | 0.809585 | 1.759214e-50 | -8.615850e-47 |
| Msa0713420 | Msa1220740 | 0.810081 | 1.376142e-50 | -8.615850e-47 |
| Msa0713420 | Msa1221540 | 0.807677 | 4.497295e-50 | -8.615850e-47 |
| Msa0713420 | Msa1226330 | 0.810290 | 1.240915e-50 | -8.615850e-47 |
| Msa0713420 | Msa1233760 | 0.800904 | 1.157877e-48 | -8.615850e-47 |
| Msa0713420 | Msa1238710 | 0.803517 | 3.356288e-49 | -8.615850e-47 |
| Msa0713420 | Msa1258100 | 0.807281 | 5.458119e-50 | -8.615850e-47 |
| Msa0713420 | Msa1258200 | 0.825375 | 4.851442e-54 | -8.615850e-47 |
| Msa0713420 | Msa1266710 | -0.805045 | 1.613781e-49 | -8.615850e-47 |
| Msa0713420 | Msa1276070 | 0.805887 | 1.074406e-49 | -8.615850e-47 |
| Msa0713420 | Msa1286910 | 0.835622 | 1.507656e-56 | -8.615850e-47 |
| Msa0713420 | Msa1291140 | 0.818678 | 1.729540e-52 | -8.615850e-47 |
| Msa0713420 | Msa1299900 | 0.801859 | 7.381715e-49 | -8.615850e-47 |
| Msa0713420 | Msa1305650 | 0.800561 | 1.360487e-48 | -8.615850e-47 |
| Msa0713420 | Msa1331610 | 0.800265 | 1.562609e-48 | -8.615850e-47 |
| Msa0713420 | Msa1334020 | 0.809555 | 1.785817e-50 | -8.615850e-47 |
| Msa0713420 | Msa1334650 | 0.815695 | 8.105086e-52 | -8.615850e-47 |
| Msa0713420 | Msa1335500 | -0.820547 | 6.474534e-53 | -8.615850e-47 |
| Msa0713420 | Msa1336080 | 0.824943 | 6.135988e-54 | -8.615850e-47 |
| Msa0713420 | Msa1341790 | 0.806804 | 6.885317e-50 | -8.615850e-47 |
| Msa0713420 | Msa1348770 | 0.814765 | 1.304104e-51 | -8.615850e-47 |
| Msa0713420 | Msa1349360 | 0.813100 | 3.037124e-51 | -8.615850e-47 |
| Msa0713420 | Msa1349490 | 0.841338 | 5.047801e-58 | -8.615850e-47 |
| Msa0713420 | Msa1356680 | 0.818192 | 2.228409e-52 | -8.615850e-47 |
| Msa0713420 | Msa1365210 | 0.830409 | 2.984974e-55 | -8.615850e-47 |
| Msa0713420 | Msa1366400 | 0.823562 | 1.295853e-53 | -8.615850e-47 |
| Msa0713420 | Msa1366700 | 0.810156 | 1.326010e-50 | -8.615850e-47 |
| Msa0713420 | Msa1373340 | 0.812799 | 3.534485e-51 | -8.615850e-47 |
| Msa0713420 | Msa1374850 | 0.811561 | 6.583315e-51 | -8.615850e-47 |
| Msa0713420 | Msa1376530 | 0.807359 | 5.252401e-50 | -8.615850e-47 |
| Msa0713420 | Msa1376590 | 0.808675 | 2.756592e-50 | -8.615850e-47 |
| Msa0713420 | Msa1376640 | 0.806931 | 6.473889e-50 | -8.615850e-47 |
| Msa0713420 | Msa1384980 | 0.822615 | 2.155198e-53 | -8.615850e-47 |
| Msa0713420 | Msa1393550 | 0.802521 | 5.393582e-49 | -8.615850e-47 |
| Msa0713420 | Msa1396310 | 0.825980 | 3.486810e-54 | -8.615850e-47 |
| Msa0713420 | Msa1397110 | 0.829426 | 5.181261e-55 | -8.615850e-47 |
| Msa0713420 | Msa1403900 | 0.833082 | 6.541545e-56 | -8.615850e-47 |
| Msa0713420 | Msa1408190 | 0.826205 | 3.081820e-54 | -8.615850e-47 |
| Msa0713420 | Msa1422490 | 0.820823 | 5.595254e-53 | -8.615850e-47 |
| Msa0713420 | Msa1426310 | 0.802817 | 4.686090e-49 | -8.615850e-47 |
| Msa0713420 | Msa1435910 | 0.836149 | 1.108453e-56 | -8.615850e-47 |
| Msa0713420 | Msa1437320 | 0.811368 | 7.249414e-51 | -8.615850e-47 |
| Msa0713420 | Msa1440180 | 0.827285 | 1.702641e-54 | -8.615850e-47 |
| Msa0713420 | Msa1448990 | 0.825966 | 3.513179e-54 | -8.615850e-47 |
| Msa0713420 | Msa1449320 | 0.805963 | 1.035812e-49 | -8.615850e-47 |
| Msa0713420 | Msa1449740 | 0.826351 | 2.845767e-54 | -8.615850e-47 |
| Msa0713420 | Msa1459590 | 0.812792 | 3.546852e-51 | -8.615850e-47 |
| Msa0713420 | Msa1463500 | 0.818101 | 2.336892e-52 | -8.615850e-47 |
| Msa0129270 | Msa0713420 | -0.822200 | 2.690776e-53 | -8.615850e-47 |
| Msa0142000 | Msa0713420 | 0.812427 | 4.262087e-51 | -8.615850e-47 |
| Msa0155540 | Msa0713420 | 0.803055 | 4.185053e-49 | -8.615850e-47 |
| Msa0160470 | Msa0713420 | 0.837962 | 3.814289e-57 | -8.615850e-47 |
| Msa0163300 | Msa0713420 | 0.826317 | 2.898325e-54 | -8.615850e-47 |
| Msa0175530 | Msa0713420 | 0.802815 | 4.691152e-49 | -8.615850e-47 |
| Msa0178940 | Msa0713420 | 0.810335 | 1.212931e-50 | -8.615850e-47 |
| Msa0181010 | Msa0713420 | 0.815739 | 7.923675e-52 | -8.615850e-47 |
| Msa0183490 | Msa0713420 | 0.810283 | 1.244802e-50 | -8.615850e-47 |
| Msa0185550 | Msa0713420 | 0.808490 | 3.018377e-50 | -8.615850e-47 |
| Msa0186380 | Msa0713420 | 0.801131 | 1.040397e-48 | -8.615850e-47 |
| Msa0188110 | Msa0713420 | 0.805687 | 1.183328e-49 | -8.615850e-47 |
| Msa0190400 | Msa0713420 | 0.832686 | 8.206834e-56 | -8.615850e-47 |
| Msa0192020 | Msa0713420 | 0.815416 | 9.351619e-52 | -8.615850e-47 |
| Msa0192710 | Msa0713420 | 0.806908 | 6.546319e-50 | -8.615850e-47 |
| Msa0209780 | Msa0713420 | 0.802089 | 6.618682e-49 | -8.615850e-47 |
| Msa0218860 | Msa0713420 | 0.849612 | 2.891306e-60 | -8.615850e-47 |
| Msa0222720 | Msa0713420 | 0.804612 | 1.986638e-49 | -8.615850e-47 |
| Msa0231590 | Msa0713420 | 0.827221 | 1.763030e-54 | -8.615850e-47 |
| Msa0236350 | Msa0713420 | 0.801401 | 9.161135e-49 | -8.615850e-47 |
| Msa0365150 | Msa0713420 | 0.803176 | 3.949665e-49 | -8.615850e-47 |
| Msa0369780 | Msa0713420 | 0.811528 | 6.693334e-51 | -8.615850e-47 |
| Msa0373130 | Msa0713420 | 0.801907 | 7.214013e-49 | -8.615850e-47 |
| Msa0375430 | Msa0713420 | 0.803273 | 3.771035e-49 | -8.615850e-47 |
| Msa0376900 | Msa0713420 | 0.837027 | 6.621202e-57 | -8.615850e-47 |
| Msa0379090 | Msa0713420 | 0.813937 | 1.987297e-51 | -8.615850e-47 |
| Msa0384570 | Msa0713420 | 0.842628 | 2.302455e-58 | -8.615850e-47 |
| Msa0385870 | Msa0713420 | 0.824007 | 1.019162e-53 | -8.615850e-47 |
| Msa0386390 | Msa0713420 | 0.800153 | 1.646790e-48 | -8.615850e-47 |
| Msa0387120 | Msa0713420 | 0.813120 | 3.005463e-51 | -8.615850e-47 |
| Msa0387790 | Msa0713420 | 0.804162 | 2.466280e-49 | -8.615850e-47 |
| Msa0398850 | Msa0713420 | 0.826406 | 2.760110e-54 | -8.615850e-47 |
| Msa0417150 | Msa0713420 | 0.801505 | 8.721993e-49 | -8.615850e-47 |
| Msa0421100 | Msa0713420 | 0.833197 | 6.123419e-56 | -8.615850e-47 |
| Msa0423110 | Msa0713420 | 0.808339 | 3.251994e-50 | -8.615850e-47 |
| Msa0434630 | Msa0713420 | 0.855905 | 4.610691e-62 | -8.615850e-47 |
| Msa0438460 | Msa0713420 | 0.801899 | 7.242001e-49 | -8.615850e-47 |
| Msa0463540 | Msa0713420 | 0.847295 | 1.265920e-59 | -8.615850e-47 |
| Msa0467080 | Msa0713420 | 0.802561 | 5.292950e-49 | -8.615850e-47 |
| Msa0467800 | Msa0713420 | 0.800174 | 1.630713e-48 | -8.615850e-47 |
| Msa0469270 | Msa0713420 | 0.806616 | 7.545578e-50 | -8.615850e-47 |
| Msa0471890 | Msa0713420 | 0.836059 | 1.167944e-56 | -8.615850e-47 |
| Msa0473450 | Msa0713420 | 0.809820 | 1.566522e-50 | -8.615850e-47 |
| Msa0475740 | Msa0713420 | 0.804182 | 2.442834e-49 | -8.615850e-47 |
| Msa0476150 | Msa0713420 | 0.811746 | 6.000431e-51 | -8.615850e-47 |
| Msa0476820 | Msa0713420 | 0.801432 | 9.027849e-49 | -8.615850e-47 |
| Msa0482020 | Msa0713420 | 0.800854 | 1.185495e-48 | -8.615850e-47 |
| Msa0250520 | Msa0713420 | 0.805907 | 1.063978e-49 | -8.615850e-47 |
| Msa0253320 | Msa0713420 | 0.802985 | 4.325357e-49 | -8.615850e-47 |
| Msa0264020 | Msa0713420 | 0.810031 | 1.410560e-50 | -8.615850e-47 |
| Msa0267120 | Msa0713420 | 0.803154 | 3.991971e-49 | -8.615850e-47 |
| Msa0267130 | Msa0713420 | 0.817774 | 2.769311e-52 | -8.615850e-47 |
| Msa0274870 | Msa0713420 | 0.800695 | 1.277580e-48 | -8.615850e-47 |
| Msa0280140 | Msa0713420 | 0.812463 | 4.187135e-51 | -8.615850e-47 |
| Msa0282860 | Msa0713420 | 0.809861 | 1.534858e-50 | -8.615850e-47 |
| Msa0284260 | Msa0713420 | 0.807819 | 4.195775e-50 | -8.615850e-47 |
| Msa0290600 | Msa0713420 | 0.847255 | 1.298138e-59 | -8.615850e-47 |
| Msa0292150 | Msa0713420 | 0.823395 | 1.417202e-53 | -8.615850e-47 |
| Msa0297860 | Msa0713420 | 0.803307 | 3.710381e-49 | -8.615850e-47 |
| Msa0308430 | Msa0713420 | 0.813191 | 2.900621e-51 | -8.615850e-47 |
| Msa0329060 | Msa0713420 | 0.801709 | 7.920818e-49 | -8.615850e-47 |
| Msa0330370 | Msa0713420 | 0.813921 | 2.004237e-51 | -8.615850e-47 |
| Msa0333900 | Msa0713420 | 0.812780 | 3.568851e-51 | -8.615850e-47 |
| Msa0334020 | Msa0713420 | 0.807899 | 4.034629e-50 | -8.615850e-47 |
| Msa0353900 | Msa0713420 | 0.832970 | 6.976123e-56 | -8.615850e-47 |
| Msa0493430 | Msa0713420 | 0.809237 | 2.089292e-50 | -8.615850e-47 |
| Msa0495510 | Msa0713420 | 0.823536 | 1.314002e-53 | -8.615850e-47 |
| Msa0500490 | Msa0713420 | 0.817269 | 3.598668e-52 | -8.615850e-47 |
| Msa0509540 | Msa0713420 | 0.814451 | 1.530149e-51 | -8.615850e-47 |
| Msa0512310 | Msa0713420 | 0.808035 | 3.774656e-50 | -8.615850e-47 |
| Msa0513660 | Msa0713420 | 0.820014 | 8.579494e-53 | -8.615850e-47 |
| Msa0519060 | Msa0713420 | 0.814353 | 1.609135e-51 | -8.615850e-47 |
| Msa0528870 | Msa0713420 | 0.801418 | 9.089025e-49 | -8.615850e-47 |
| Msa0534380 | Msa0713420 | 0.835386 | 1.729345e-56 | -8.615850e-47 |
| Msa0539320 | Msa0713420 | 0.823071 | 1.687109e-53 | -8.615850e-47 |
| Msa0539400 | Msa0713420 | 0.811304 | 7.486629e-51 | -8.615850e-47 |
| Msa0542040 | Msa0713420 | 0.822926 | 1.824173e-53 | -8.615850e-47 |
| Msa0553230 | Msa0713420 | 0.802542 | 5.340664e-49 | -8.615850e-47 |
| Msa0553350 | Msa0713420 | 0.802690 | 4.976401e-49 | -8.615850e-47 |
| Msa0554170 | Msa0713420 | 0.801487 | 8.800098e-49 | -8.615850e-47 |
| Msa0555980 | Msa0713420 | 0.815004 | 1.154198e-51 | -8.615850e-47 |
| Msa0579610 | Msa0713420 | 0.818400 | 1.999604e-52 | -8.615850e-47 |
| Msa0581190 | Msa0713420 | 0.833513 | 5.109130e-56 | -8.615850e-47 |
| Msa0581490 | Msa0713420 | 0.829304 | 5.549508e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713420 | MtrunA17_Chr5g0400351 | 86.575 | 365 | 32 | 4 | 1 | 363 | 1 | 350 | 0.0 | 527 |
| Msa0713420 | MtrunA17_Chr1g0175161 | 30.964 | 394 | 190 | 21 | 1 | 369 | 1 | 337 | 3.59e-23 | 99.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713420 | AT3G57990.1 | 32.012 | 328 | 168 | 11 | 1 | 311 | 1 | 290 | 4.17e-33 | 127 |
Find 76 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTGGCAGTGAATAAAAT+TGG | 0.189398 | 5_1:-5559437 | Msa0713420:CDS |
| TTCACCTTGTGTTGGTGTTA+TGG | 0.239203 | 5_1:-5559549 | Msa0713420:CDS |
| GAATGTTGAGAAGGAGAATA+AGG | 0.275772 | 5_1:-5559315 | Msa0713420:CDS |
| GAAGAGAGAAATGACCAAAT+TGG | 0.284719 | 5_1:+5559798 | None:intergenic |
| GGGTTGTTGAATATTGTTAT+TGG | 0.296129 | 5_1:+5560106 | None:intergenic |
| GGGGTTGAAAATGCCATATT+TGG | 0.313158 | 5_1:-5559453 | Msa0713420:CDS |
| AAGAGAGAAATGACCAAATT+GGG | 0.341710 | 5_1:+5559799 | None:intergenic |
| TTTCCTGAAGGGTGTTCTTC+CGG | 0.343308 | 5_1:-5559677 | Msa0713420:CDS |
| TTACACTTTAAACCCCAATT+TGG | 0.351935 | 5_1:-5559812 | Msa0713420:CDS |
| AAGCAGAAGCAGAAGCATTC+AGG | 0.352808 | 5_1:-5559230 | Msa0713420:CDS |
| GGTGAGAGCTTTCAAAGTTT+AGG | 0.356862 | 5_1:-5559209 | Msa0713420:CDS |
| GAAGGAGATGAAAATGGATT+TGG | 0.357391 | 5_1:-5559339 | Msa0713420:CDS |
| CTATCATTATTTGGGTTTGA+GGG | 0.361904 | 5_1:+5560137 | None:intergenic |
| ATTGTTGAATGAGATGAAAA+TGG | 0.365578 | 5_1:-5559282 | Msa0713420:CDS |
| GCTAGAATTAGTAACAGTTT+TGG | 0.366611 | 5_1:+5559742 | None:intergenic |
| GCTATCATTATTTGGGTTTG+AGG | 0.371900 | 5_1:+5560136 | None:intergenic |
| CTCTCCCTCAAATCCGGTTT+AGG | 0.377684 | 5_1:-5559932 | Msa0713420:CDS |
| TTCTCTCTCTCCCTCAAATC+CGG | 0.384397 | 5_1:-5559938 | Msa0713420:CDS |
| ACAACGTTGGTGTTGGTGTT+GGG | 0.388448 | 5_1:-5559610 | Msa0713420:CDS |
| CTTTCAACAAATTTCCCAAC+TGG | 0.401458 | 5_1:-5560025 | Msa0713420:CDS |
| GAAGAAGTTGTGGTTGTTGT+TGG | 0.403361 | 5_1:+5559977 | None:intergenic |
| ATTTGGCAGTGAATAAAATT+GGG | 0.410901 | 5_1:-5559436 | Msa0713420:CDS |
| GGTGCTGAAGGAGATGAAAA+TGG | 0.412755 | 5_1:-5559345 | Msa0713420:CDS |
| TGTTTCACCTCAAATTGAAA+AGG | 0.413802 | 5_1:-5559711 | Msa0713420:CDS |
| AGAAGTTGAGTAGTTATTTG+TGG | 0.420121 | 5_1:+5560063 | None:intergenic |
| CGGTTGGCAAAATTTGAACT+TGG | 0.433091 | 5_1:-5559657 | Msa0713420:CDS |
| CAACCGGAAGAACACCCTTC+AGG | 0.434204 | 5_1:+5559674 | None:intergenic |
| ATGAAAATGGGAGTTTCTAA+AGG | 0.436835 | 5_1:-5559269 | Msa0713420:CDS |
| AATTTGAACTTGGAACCATT+TGG | 0.450192 | 5_1:-5559647 | Msa0713420:CDS |
| GTTTCACCTCAAATTGAAAA+GGG | 0.450632 | 5_1:-5559710 | Msa0713420:CDS |
| TAATTGTGAAGGTGATTTGC+AGG | 0.455443 | 5_1:-5559366 | Msa0713420:CDS |
| TTGTTGTTGTTGTGACCAAA+TGG | 0.457327 | 5_1:+5559632 | None:intergenic |
| GAAGAACACCCTTCAGGAAA+AGG | 0.459462 | 5_1:+5559680 | None:intergenic |
| CTGAAGGGTGTTCTTCCGGT+TGG | 0.461829 | 5_1:-5559673 | Msa0713420:CDS |
| AGGAAGAAGAGGGGTAGAAG+AGG | 0.462267 | 5_1:+5559844 | None:intergenic |
| TGGAGAGTAAGAGAGTTTGA+AGG | 0.463503 | 5_1:+5559997 | None:intergenic |
| GGCAGTGAATAAAATTGGGT+TGG | 0.467463 | 5_1:-5559432 | Msa0713420:CDS |
| GTTTGAAGGTTGGACCAGTT+GGG | 0.475548 | 5_1:+5560011 | None:intergenic |
| AGTTTGAAGGTTGGACCAGT+TGG | 0.477278 | 5_1:+5560010 | None:intergenic |
| AACAACAACCCTTGTGTCAC+CGG | 0.481710 | 5_1:+5559512 | None:intergenic |
| AAGACCTAAACCGGATTTGA+GGG | 0.482511 | 5_1:+5559928 | None:intergenic |
| AAGAGAAAGAAGGAAGAAGA+GGG | 0.484937 | 5_1:+5559834 | None:intergenic |
| CAACGTTGGTGTTGGTGTTG+GGG | 0.488480 | 5_1:-5559609 | Msa0713420:CDS |
| CTGTGATAGTTGAAAGTAAA+GGG | 0.504099 | 5_1:+5560086 | None:intergenic |
| AAAGACCTAAACCGGATTTG+AGG | 0.506868 | 5_1:+5559927 | None:intergenic |
| GATTTGAGGGAGAGAGAGAA+AGG | 0.514169 | 5_1:+5559941 | None:intergenic |
| AATGGGAGTTTCTAAAGGGA+AGG | 0.515092 | 5_1:-5559264 | Msa0713420:CDS |
| AACAACGTTGGTGTTGGTGT+TGG | 0.518386 | 5_1:-5559611 | Msa0713420:CDS |
| AGAAGAAAGAGAGAAATTAG+CGG | 0.537805 | 5_1:+5559871 | None:intergenic |
| TTGTTGAATGAGATGAAAAT+GGG | 0.539773 | 5_1:-5559281 | Msa0713420:CDS |
| TGAAAATGGGAGTTTCTAAA+GGG | 0.540370 | 5_1:-5559268 | Msa0713420:CDS |
| TATCATTATTTGGGTTTGAG+GGG | 0.540727 | 5_1:+5560138 | None:intergenic |
| AAAGAGAAAGAAGGAAGAAG+AGG | 0.540783 | 5_1:+5559833 | None:intergenic |
| ATTTGAGGTGAAACAGAAAG+AGG | 0.542815 | 5_1:+5559719 | None:intergenic |
| TGAATAAAATTGGGTTGGAG+AGG | 0.545470 | 5_1:-5559427 | Msa0713420:CDS |
| TTAAAGTGTAAAGAGAAAGA+AGG | 0.545511 | 5_1:+5559824 | None:intergenic |
| TATGGCTAGGACGGTGATGC+CGG | 0.560278 | 5_1:-5559531 | Msa0713420:CDS |
| ACGGTGATGCCGGTGACACA+AGG | 0.562748 | 5_1:-5559521 | Msa0713420:CDS |
| AAGAAATGAAGAAAGATGAG+TGG | 0.566368 | 5_1:-5559400 | Msa0713420:CDS |
| AGAGAAAGAAGGAAGAAGAG+GGG | 0.566909 | 5_1:+5559835 | None:intergenic |
| GGATTTGGAGAATGTTGAGA+AGG | 0.568307 | 5_1:-5559324 | Msa0713420:CDS |
| AACAACAACAACGTTGGTGT+TGG | 0.570170 | 5_1:-5559617 | Msa0713420:CDS |
| CTTGTGTTGGTGTTATGGCT+AGG | 0.572621 | 5_1:-5559544 | Msa0713420:CDS |
| GAGTAAGAGAGTTTGAAGGT+TGG | 0.580998 | 5_1:+5560001 | None:intergenic |
| TATGGTCTTTCACCTTGTGT+TGG | 0.586817 | 5_1:-5559557 | Msa0713420:CDS |
| GGTGTAAGAATCTGAGAGAA+CGG | 0.587778 | 5_1:+5559769 | None:intergenic |
| AGGTGATTTGCAGGTGCTGA+AGG | 0.592161 | 5_1:-5559357 | Msa0713420:CDS |
| AAGACAAGAGGAGAATGATG+AGG | 0.617004 | 5_1:+5559896 | None:intergenic |
| TTTGAGGTGAAACAGAAAGA+GGG | 0.620965 | 5_1:+5559720 | None:intergenic |
| AGAGAGAAATGACCAAATTG+GGG | 0.622142 | 5_1:+5559800 | None:intergenic |
| TGTTGGTGTTATGGCTAGGA+CGG | 0.624391 | 5_1:-5559540 | Msa0713420:CDS |
| GCTGTGATAGTTGAAAGTAA+AGG | 0.627420 | 5_1:+5560085 | None:intergenic |
| AAATTAGCGGAGAAGACAAG+AGG | 0.646343 | 5_1:+5559884 | None:intergenic |
| AACAACGATGATAATTGTGA+AGG | 0.673292 | 5_1:-5559377 | Msa0713420:CDS |
| CTAGCCATAACACCAACACA+AGG | 0.698523 | 5_1:+5559545 | None:intergenic |
| CGGTGATGCCGGTGACACAA+GGG | 0.700522 | 5_1:-5559520 | Msa0713420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACTTTTGCTATCATTATTT+GGG | + | chr5_1:5559143-5559162 | None:intergenic | 20.0% |
| !!! | TACTTTTGCTATCATTATTT+GGG | + | chr5_1:5559143-5559162 | None:intergenic | 20.0% |
| !!! | ATTGTTGTTTTGGAATTTGA+GGG | + | chr5_1:5559098-5559117 | None:intergenic | 25.0% |
| !!! | GTTGATTTTCATTGTTGTTT+TGG | + | chr5_1:5559108-5559127 | None:intergenic | 25.0% |
| !!! | GTACTTTTGCTATCATTATT+TGG | + | chr5_1:5559144-5559163 | None:intergenic | 25.0% |
| ! | TTAAAGTGTAAAGAGAAAGA+AGG | + | chr5_1:5559448-5559467 | None:intergenic | 25.0% |
| ! | GCTAAAAACAGTGAAAAATA+TGG | - | chr5_1:5559694-5559713 | Msa0713420:CDS | 25.0% |
| !! | ATTTTATTCACTGCCAAATA+TGG | + | chr5_1:5559832-5559851 | None:intergenic | 25.0% |
| ! | TATTTGGCAGTGAATAAAAT+TGG | - | chr5_1:5559832-5559851 | Msa0713420:CDS | 25.0% |
| ! | ATTTGGCAGTGAATAAAATT+GGG | - | chr5_1:5559833-5559852 | Msa0713420:CDS | 25.0% |
| ! | ATTGTTGAATGAGATGAAAA+TGG | - | chr5_1:5559987-5560006 | Msa0713420:CDS | 25.0% |
| ! | TTGTTGAATGAGATGAAAAT+GGG | - | chr5_1:5559988-5560007 | Msa0713420:CDS | 25.0% |
| ! | AGTTTAGGAAGCAATAAAAA+TGG | - | chr5_1:5560075-5560094 | Msa0713420:CDS | 25.0% |
| !!! | ATTGTTGTTTTGGAATTTGA+GGG | + | chr5_1:5559098-5559117 | None:intergenic | 25.0% |
| !!! | GTTGATTTTCATTGTTGTTT+TGG | + | chr5_1:5559108-5559127 | None:intergenic | 25.0% |
| !!! | GTACTTTTGCTATCATTATT+TGG | + | chr5_1:5559144-5559163 | None:intergenic | 25.0% |
| ! | TTAAAGTGTAAAGAGAAAGA+AGG | + | chr5_1:5559448-5559467 | None:intergenic | 25.0% |
| ! | GCTAAAAACAGTGAAAAATA+TGG | - | chr5_1:5559694-5559713 | Msa0713420:CDS | 25.0% |
| !! | ATTTTATTCACTGCCAAATA+TGG | + | chr5_1:5559832-5559851 | None:intergenic | 25.0% |
| ! | TATTTGGCAGTGAATAAAAT+TGG | - | chr5_1:5559832-5559851 | Msa0713420:CDS | 25.0% |
| ! | ATTTGGCAGTGAATAAAATT+GGG | - | chr5_1:5559833-5559852 | Msa0713420:CDS | 25.0% |
| ! | ATTGTTGAATGAGATGAAAA+TGG | - | chr5_1:5559987-5560006 | Msa0713420:CDS | 25.0% |
| ! | TTGTTGAATGAGATGAAAAT+GGG | - | chr5_1:5559988-5560007 | Msa0713420:CDS | 25.0% |
| ! | AGTTTAGGAAGCAATAAAAA+TGG | - | chr5_1:5560075-5560094 | Msa0713420:CDS | 25.0% |
| !!! | CATTGTTGTTTTGGAATTTG+AGG | + | chr5_1:5559099-5559118 | None:intergenic | 30.0% |
| ! | TATCATTATTTGGGTTTGAG+GGG | + | chr5_1:5559134-5559153 | None:intergenic | 30.0% |
| ! | CTATCATTATTTGGGTTTGA+GGG | + | chr5_1:5559135-5559154 | None:intergenic | 30.0% |
| GGGTTGTTGAATATTGTTAT+TGG | + | chr5_1:5559166-5559185 | None:intergenic | 30.0% | |
| CTGTGATAGTTGAAAGTAAA+GGG | + | chr5_1:5559186-5559205 | None:intergenic | 30.0% | |
| AGAAGTTGAGTAGTTATTTG+TGG | + | chr5_1:5559209-5559228 | None:intergenic | 30.0% | |
| AGAAGAAAGAGAGAAATTAG+CGG | + | chr5_1:5559401-5559420 | None:intergenic | 30.0% | |
| TTACACTTTAAACCCCAATT+TGG | - | chr5_1:5559457-5559476 | Msa0713420:CDS | 30.0% | |
| AAGAGAGAAATGACCAAATT+GGG | + | chr5_1:5559473-5559492 | None:intergenic | 30.0% | |
| !! | ATTAGTAACAGTTTTGGTGT+TGG | + | chr5_1:5559524-5559543 | None:intergenic | 30.0% |
| ! | GCTAGAATTAGTAACAGTTT+TGG | + | chr5_1:5559530-5559549 | None:intergenic | 30.0% |
| TGTTTCACCTCAAATTGAAA+AGG | - | chr5_1:5559558-5559577 | Msa0713420:CDS | 30.0% | |
| GTTTCACCTCAAATTGAAAA+GGG | - | chr5_1:5559559-5559578 | Msa0713420:CDS | 30.0% | |
| AATTTGAACTTGGAACCATT+TGG | - | chr5_1:5559622-5559641 | Msa0713420:CDS | 30.0% | |
| !!! | TTTCACTGTTTTTAGCATCT+GGG | + | chr5_1:5559690-5559709 | None:intergenic | 30.0% |
| !!! | TTTTCACTGTTTTTAGCATC+TGG | + | chr5_1:5559691-5559710 | None:intergenic | 30.0% |
| !! | GTTGTTGTTGAATTTTCGTT+GGG | - | chr5_1:5559771-5559790 | Msa0713420:CDS | 30.0% |
| !! | TTGTTGTTGAATTTTCGTTG+GGG | - | chr5_1:5559772-5559791 | Msa0713420:CDS | 30.0% |
| AAGAAATGAAGAAAGATGAG+TGG | - | chr5_1:5559869-5559888 | Msa0713420:CDS | 30.0% | |
| AACAACGATGATAATTGTGA+AGG | - | chr5_1:5559892-5559911 | Msa0713420:CDS | 30.0% | |
| ATGAAAATGGGAGTTTCTAA+AGG | - | chr5_1:5560000-5560019 | Msa0713420:CDS | 30.0% | |
| TGAAAATGGGAGTTTCTAAA+GGG | - | chr5_1:5560001-5560020 | Msa0713420:CDS | 30.0% | |
| ! | GAGTGATTTTGAATCTGAAT+TGG | - | chr5_1:5560149-5560168 | Msa0713420:CDS | 30.0% |
| !!! | CATTGTTGTTTTGGAATTTG+AGG | + | chr5_1:5559099-5559118 | None:intergenic | 30.0% |
| ! | TATCATTATTTGGGTTTGAG+GGG | + | chr5_1:5559134-5559153 | None:intergenic | 30.0% |
| ! | CTATCATTATTTGGGTTTGA+GGG | + | chr5_1:5559135-5559154 | None:intergenic | 30.0% |
| GGGTTGTTGAATATTGTTAT+TGG | + | chr5_1:5559166-5559185 | None:intergenic | 30.0% | |
| CTGTGATAGTTGAAAGTAAA+GGG | + | chr5_1:5559186-5559205 | None:intergenic | 30.0% | |
| AGAAGTTGAGTAGTTATTTG+TGG | + | chr5_1:5559209-5559228 | None:intergenic | 30.0% | |
| AGAAGAAAGAGAGAAATTAG+CGG | + | chr5_1:5559401-5559420 | None:intergenic | 30.0% | |
| TTACACTTTAAACCCCAATT+TGG | - | chr5_1:5559457-5559476 | Msa0713420:CDS | 30.0% | |
| AAGAGAGAAATGACCAAATT+GGG | + | chr5_1:5559473-5559492 | None:intergenic | 30.0% | |
| !! | ATTAGTAACAGTTTTGGTGT+TGG | + | chr5_1:5559524-5559543 | None:intergenic | 30.0% |
| ! | GCTAGAATTAGTAACAGTTT+TGG | + | chr5_1:5559530-5559549 | None:intergenic | 30.0% |
| TGTTTCACCTCAAATTGAAA+AGG | - | chr5_1:5559558-5559577 | Msa0713420:CDS | 30.0% | |
| GTTTCACCTCAAATTGAAAA+GGG | - | chr5_1:5559559-5559578 | Msa0713420:CDS | 30.0% | |
| AATTTGAACTTGGAACCATT+TGG | - | chr5_1:5559622-5559641 | Msa0713420:CDS | 30.0% | |
| !!! | TTTCACTGTTTTTAGCATCT+GGG | + | chr5_1:5559690-5559709 | None:intergenic | 30.0% |
| !!! | TTTTCACTGTTTTTAGCATC+TGG | + | chr5_1:5559691-5559710 | None:intergenic | 30.0% |
| !! | GTTGTTGTTGAATTTTCGTT+GGG | - | chr5_1:5559771-5559790 | Msa0713420:CDS | 30.0% |
| !! | TTGTTGTTGAATTTTCGTTG+GGG | - | chr5_1:5559772-5559791 | Msa0713420:CDS | 30.0% |
| AAGAAATGAAGAAAGATGAG+TGG | - | chr5_1:5559869-5559888 | Msa0713420:CDS | 30.0% | |
| AACAACGATGATAATTGTGA+AGG | - | chr5_1:5559892-5559911 | Msa0713420:CDS | 30.0% | |
| ATGAAAATGGGAGTTTCTAA+AGG | - | chr5_1:5560000-5560019 | Msa0713420:CDS | 30.0% | |
| TGAAAATGGGAGTTTCTAAA+GGG | - | chr5_1:5560001-5560020 | Msa0713420:CDS | 30.0% | |
| ! | GAGTGATTTTGAATCTGAAT+TGG | - | chr5_1:5560149-5560168 | Msa0713420:CDS | 30.0% |
| ! | GCTATCATTATTTGGGTTTG+AGG | + | chr5_1:5559136-5559155 | None:intergenic | 35.0% |
| GCTGTGATAGTTGAAAGTAA+AGG | + | chr5_1:5559187-5559206 | None:intergenic | 35.0% | |
| CTTTCAACAAATTTCCCAAC+TGG | - | chr5_1:5559244-5559263 | Msa0713420:CDS | 35.0% | |
| AGAAGAAGAAGAAGAAGTTG+TGG | + | chr5_1:5559305-5559324 | None:intergenic | 35.0% | |
| ! | AAATCCGGTTTAGGTCTTTT+TGG | - | chr5_1:5559346-5559365 | Msa0713420:CDS | 35.0% |
| TGAACCAAAAAGACCTAAAC+CGG | + | chr5_1:5559353-5559372 | None:intergenic | 35.0% | |
| AAGAGAAAGAAGGAAGAAGA+GGG | + | chr5_1:5559438-5559457 | None:intergenic | 35.0% | |
| AAAGAGAAAGAAGGAAGAAG+AGG | + | chr5_1:5559439-5559458 | None:intergenic | 35.0% | |
| AGAGAGAAATGACCAAATTG+GGG | + | chr5_1:5559472-5559491 | None:intergenic | 35.0% | |
| GAAGAGAGAAATGACCAAAT+TGG | + | chr5_1:5559474-5559493 | None:intergenic | 35.0% | |
| ! | TTTGAGGTGAAACAGAAAGA+GGG | + | chr5_1:5559552-5559571 | None:intergenic | 35.0% |
| ! | ATTTGAGGTGAAACAGAAAG+AGG | + | chr5_1:5559553-5559572 | None:intergenic | 35.0% |
| ! | ACACAACCCTTTTCAATTTG+AGG | + | chr5_1:5559568-5559587 | None:intergenic | 35.0% |
| ! | CAAGTTCAAATTTTGCCAAC+CGG | + | chr5_1:5559614-5559633 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGTGACCAAA+TGG | + | chr5_1:5559640-5559659 | None:intergenic | 35.0% |
| !! | GGTTGTTGTTGAATTTTCGT+TGG | - | chr5_1:5559770-5559789 | Msa0713420:CDS | 35.0% |
| !! | TGAATAAAATTGGGTTGGAG+AGG | - | chr5_1:5559842-5559861 | Msa0713420:CDS | 35.0% |
| ! | TAATTGTGAAGGTGATTTGC+AGG | - | chr5_1:5559903-5559922 | Msa0713420:CDS | 35.0% |
| ! | GAAGGAGATGAAAATGGATT+TGG | - | chr5_1:5559930-5559949 | Msa0713420:CDS | 35.0% |
| GAATGTTGAGAAGGAGAATA+AGG | - | chr5_1:5559954-5559973 | Msa0713420:CDS | 35.0% | |
| ! | GCTATCATTATTTGGGTTTG+AGG | + | chr5_1:5559136-5559155 | None:intergenic | 35.0% |
| GCTGTGATAGTTGAAAGTAA+AGG | + | chr5_1:5559187-5559206 | None:intergenic | 35.0% | |
| CTTTCAACAAATTTCCCAAC+TGG | - | chr5_1:5559244-5559263 | Msa0713420:CDS | 35.0% | |
| AGAAGAAGAAGAAGAAGTTG+TGG | + | chr5_1:5559305-5559324 | None:intergenic | 35.0% | |
| ! | AAATCCGGTTTAGGTCTTTT+TGG | - | chr5_1:5559346-5559365 | Msa0713420:CDS | 35.0% |
| TGAACCAAAAAGACCTAAAC+CGG | + | chr5_1:5559353-5559372 | None:intergenic | 35.0% | |
| AAGAGAAAGAAGGAAGAAGA+GGG | + | chr5_1:5559438-5559457 | None:intergenic | 35.0% | |
| AAAGAGAAAGAAGGAAGAAG+AGG | + | chr5_1:5559439-5559458 | None:intergenic | 35.0% | |
| AGAGAGAAATGACCAAATTG+GGG | + | chr5_1:5559472-5559491 | None:intergenic | 35.0% | |
| GAAGAGAGAAATGACCAAAT+TGG | + | chr5_1:5559474-5559493 | None:intergenic | 35.0% | |
| ! | TTTGAGGTGAAACAGAAAGA+GGG | + | chr5_1:5559552-5559571 | None:intergenic | 35.0% |
| ! | ATTTGAGGTGAAACAGAAAG+AGG | + | chr5_1:5559553-5559572 | None:intergenic | 35.0% |
| ! | ACACAACCCTTTTCAATTTG+AGG | + | chr5_1:5559568-5559587 | None:intergenic | 35.0% |
| ! | CAAGTTCAAATTTTGCCAAC+CGG | + | chr5_1:5559614-5559633 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGTGACCAAA+TGG | + | chr5_1:5559640-5559659 | None:intergenic | 35.0% |
| !! | GGTTGTTGTTGAATTTTCGT+TGG | - | chr5_1:5559770-5559789 | Msa0713420:CDS | 35.0% |
| !! | TGAATAAAATTGGGTTGGAG+AGG | - | chr5_1:5559842-5559861 | Msa0713420:CDS | 35.0% |
| ! | TAATTGTGAAGGTGATTTGC+AGG | - | chr5_1:5559903-5559922 | Msa0713420:CDS | 35.0% |
| ! | GAAGGAGATGAAAATGGATT+TGG | - | chr5_1:5559930-5559949 | Msa0713420:CDS | 35.0% |
| GAATGTTGAGAAGGAGAATA+AGG | - | chr5_1:5559954-5559973 | Msa0713420:CDS | 35.0% | |
| GAGTAAGAGAGTTTGAAGGT+TGG | + | chr5_1:5559271-5559290 | None:intergenic | 40.0% | |
| TGGAGAGTAAGAGAGTTTGA+AGG | + | chr5_1:5559275-5559294 | None:intergenic | 40.0% | |
| GAAGAAGTTGTGGTTGTTGT+TGG | + | chr5_1:5559295-5559314 | None:intergenic | 40.0% | |
| AAGACCTAAACCGGATTTGA+GGG | + | chr5_1:5559344-5559363 | None:intergenic | 40.0% | |
| AAAGACCTAAACCGGATTTG+AGG | + | chr5_1:5559345-5559364 | None:intergenic | 40.0% | |
| AAGACAAGAGGAGAATGATG+AGG | + | chr5_1:5559376-5559395 | None:intergenic | 40.0% | |
| AAATTAGCGGAGAAGACAAG+AGG | + | chr5_1:5559388-5559407 | None:intergenic | 40.0% | |
| AGAGAAAGAAGGAAGAAGAG+GGG | + | chr5_1:5559437-5559456 | None:intergenic | 40.0% | |
| GGTGTAAGAATCTGAGAGAA+CGG | + | chr5_1:5559503-5559522 | None:intergenic | 40.0% | |
| ! | GTTGTGTTCCTTTTCCTGAA+GGG | - | chr5_1:5559581-5559600 | Msa0713420:CDS | 40.0% |
| CGGTTGGCAAAATTTGAACT+TGG | - | chr5_1:5559612-5559631 | Msa0713420:CDS | 40.0% | |
| CACAACAACAACAACAACGT+TGG | - | chr5_1:5559646-5559665 | Msa0713420:CDS | 40.0% | |
| AACAACAACAACGTTGGTGT+TGG | - | chr5_1:5559652-5559671 | Msa0713420:CDS | 40.0% | |
| TATGGTCTTTCACCTTGTGT+TGG | - | chr5_1:5559712-5559731 | Msa0713420:CDS | 40.0% | |
| !! | TTCACCTTGTGTTGGTGTTA+TGG | - | chr5_1:5559720-5559739 | Msa0713420:CDS | 40.0% |
| ! | TGTGAGTTTTCCAGGGAAAT+CGG | - | chr5_1:5559795-5559814 | Msa0713420:CDS | 40.0% |
| GGGGTTGAAAATGCCATATT+TGG | - | chr5_1:5559816-5559835 | Msa0713420:CDS | 40.0% | |
| GGCAGTGAATAAAATTGGGT+TGG | - | chr5_1:5559837-5559856 | Msa0713420:CDS | 40.0% | |
| GGATTTGGAGAATGTTGAGA+AGG | - | chr5_1:5559945-5559964 | Msa0713420:CDS | 40.0% | |
| ! | AATGGGAGTTTCTAAAGGGA+AGG | - | chr5_1:5560005-5560024 | Msa0713420:CDS | 40.0% |
| GGTGAGAGCTTTCAAAGTTT+AGG | - | chr5_1:5560060-5560079 | Msa0713420:CDS | 40.0% | |
| GAGTAAGAGAGTTTGAAGGT+TGG | + | chr5_1:5559271-5559290 | None:intergenic | 40.0% | |
| TGGAGAGTAAGAGAGTTTGA+AGG | + | chr5_1:5559275-5559294 | None:intergenic | 40.0% | |
| GAAGAAGTTGTGGTTGTTGT+TGG | + | chr5_1:5559295-5559314 | None:intergenic | 40.0% | |
| AAGACCTAAACCGGATTTGA+GGG | + | chr5_1:5559344-5559363 | None:intergenic | 40.0% | |
| AAAGACCTAAACCGGATTTG+AGG | + | chr5_1:5559345-5559364 | None:intergenic | 40.0% | |
| AAGACAAGAGGAGAATGATG+AGG | + | chr5_1:5559376-5559395 | None:intergenic | 40.0% | |
| AAATTAGCGGAGAAGACAAG+AGG | + | chr5_1:5559388-5559407 | None:intergenic | 40.0% | |
| AGAGAAAGAAGGAAGAAGAG+GGG | + | chr5_1:5559437-5559456 | None:intergenic | 40.0% | |
| GGTGTAAGAATCTGAGAGAA+CGG | + | chr5_1:5559503-5559522 | None:intergenic | 40.0% | |
| ! | GTTGTGTTCCTTTTCCTGAA+GGG | - | chr5_1:5559581-5559600 | Msa0713420:CDS | 40.0% |
| CGGTTGGCAAAATTTGAACT+TGG | - | chr5_1:5559612-5559631 | Msa0713420:CDS | 40.0% | |
| CACAACAACAACAACAACGT+TGG | - | chr5_1:5559646-5559665 | Msa0713420:CDS | 40.0% | |
| AACAACAACAACGTTGGTGT+TGG | - | chr5_1:5559652-5559671 | Msa0713420:CDS | 40.0% | |
| TATGGTCTTTCACCTTGTGT+TGG | - | chr5_1:5559712-5559731 | Msa0713420:CDS | 40.0% | |
| !! | TTCACCTTGTGTTGGTGTTA+TGG | - | chr5_1:5559720-5559739 | Msa0713420:CDS | 40.0% |
| ! | TGTGAGTTTTCCAGGGAAAT+CGG | - | chr5_1:5559795-5559814 | Msa0713420:CDS | 40.0% |
| GGGGTTGAAAATGCCATATT+TGG | - | chr5_1:5559816-5559835 | Msa0713420:CDS | 40.0% | |
| GGCAGTGAATAAAATTGGGT+TGG | - | chr5_1:5559837-5559856 | Msa0713420:CDS | 40.0% | |
| GGATTTGGAGAATGTTGAGA+AGG | - | chr5_1:5559945-5559964 | Msa0713420:CDS | 40.0% | |
| ! | AATGGGAGTTTCTAAAGGGA+AGG | - | chr5_1:5560005-5560024 | Msa0713420:CDS | 40.0% |
| GGTGAGAGCTTTCAAAGTTT+AGG | - | chr5_1:5560060-5560079 | Msa0713420:CDS | 40.0% | |
| GTTTGAAGGTTGGACCAGTT+GGG | + | chr5_1:5559261-5559280 | None:intergenic | 45.0% | |
| AGTTTGAAGGTTGGACCAGT+TGG | + | chr5_1:5559262-5559281 | None:intergenic | 45.0% | |
| GATTTGAGGGAGAGAGAGAA+AGG | + | chr5_1:5559331-5559350 | None:intergenic | 45.0% | |
| TTCTCTCTCTCCCTCAAATC+CGG | - | chr5_1:5559331-5559350 | Msa0713420:CDS | 45.0% | |
| ! | GGTTGTGTTCCTTTTCCTGA+AGG | - | chr5_1:5559580-5559599 | Msa0713420:CDS | 45.0% |
| GAAGAACACCCTTCAGGAAA+AGG | + | chr5_1:5559592-5559611 | None:intergenic | 45.0% | |
| !! | TTTCCTGAAGGGTGTTCTTC+CGG | - | chr5_1:5559592-5559611 | Msa0713420:CDS | 45.0% |
| !! | AACAACGTTGGTGTTGGTGT+TGG | - | chr5_1:5559658-5559677 | Msa0713420:CDS | 45.0% |
| !! | ACAACGTTGGTGTTGGTGTT+GGG | - | chr5_1:5559659-5559678 | Msa0713420:CDS | 45.0% |
| CTAGCCATAACACCAACACA+AGG | + | chr5_1:5559727-5559746 | None:intergenic | 45.0% | |
| !! | CTTGTGTTGGTGTTATGGCT+AGG | - | chr5_1:5559725-5559744 | Msa0713420:CDS | 45.0% |
| !! | TGTTGGTGTTATGGCTAGGA+CGG | - | chr5_1:5559729-5559748 | Msa0713420:CDS | 45.0% |
| AACAACAACCCTTGTGTCAC+CGG | + | chr5_1:5559760-5559779 | None:intergenic | 45.0% | |
| ! | GTGAGTTTTCCAGGGAAATC+GGG | - | chr5_1:5559796-5559815 | Msa0713420:CDS | 45.0% |
| ! | TGAGTTTTCCAGGGAAATCG+GGG | - | chr5_1:5559797-5559816 | Msa0713420:CDS | 45.0% |
| ! | ATTTTCAACCCCGATTTCCC+TGG | + | chr5_1:5559808-5559827 | None:intergenic | 45.0% |
| ! | GGTGCTGAAGGAGATGAAAA+TGG | - | chr5_1:5559924-5559943 | Msa0713420:CDS | 45.0% |
| !! | AAGCAGAAGCAGAAGCATTC+AGG | - | chr5_1:5560039-5560058 | Msa0713420:CDS | 45.0% |
| GTTTGAAGGTTGGACCAGTT+GGG | + | chr5_1:5559261-5559280 | None:intergenic | 45.0% | |
| AGTTTGAAGGTTGGACCAGT+TGG | + | chr5_1:5559262-5559281 | None:intergenic | 45.0% | |
| GATTTGAGGGAGAGAGAGAA+AGG | + | chr5_1:5559331-5559350 | None:intergenic | 45.0% | |
| TTCTCTCTCTCCCTCAAATC+CGG | - | chr5_1:5559331-5559350 | Msa0713420:CDS | 45.0% | |
| ! | GGTTGTGTTCCTTTTCCTGA+AGG | - | chr5_1:5559580-5559599 | Msa0713420:CDS | 45.0% |
| GAAGAACACCCTTCAGGAAA+AGG | + | chr5_1:5559592-5559611 | None:intergenic | 45.0% | |
| !! | TTTCCTGAAGGGTGTTCTTC+CGG | - | chr5_1:5559592-5559611 | Msa0713420:CDS | 45.0% |
| !! | AACAACGTTGGTGTTGGTGT+TGG | - | chr5_1:5559658-5559677 | Msa0713420:CDS | 45.0% |
| !! | ACAACGTTGGTGTTGGTGTT+GGG | - | chr5_1:5559659-5559678 | Msa0713420:CDS | 45.0% |
| CTAGCCATAACACCAACACA+AGG | + | chr5_1:5559727-5559746 | None:intergenic | 45.0% | |
| !! | CTTGTGTTGGTGTTATGGCT+AGG | - | chr5_1:5559725-5559744 | Msa0713420:CDS | 45.0% |
| !! | TGTTGGTGTTATGGCTAGGA+CGG | - | chr5_1:5559729-5559748 | Msa0713420:CDS | 45.0% |
| AACAACAACCCTTGTGTCAC+CGG | + | chr5_1:5559760-5559779 | None:intergenic | 45.0% | |
| ! | GTGAGTTTTCCAGGGAAATC+GGG | - | chr5_1:5559796-5559815 | Msa0713420:CDS | 45.0% |
| ! | TGAGTTTTCCAGGGAAATCG+GGG | - | chr5_1:5559797-5559816 | Msa0713420:CDS | 45.0% |
| ! | ATTTTCAACCCCGATTTCCC+TGG | + | chr5_1:5559808-5559827 | None:intergenic | 45.0% |
| ! | GGTGCTGAAGGAGATGAAAA+TGG | - | chr5_1:5559924-5559943 | Msa0713420:CDS | 45.0% |
| !! | AAGCAGAAGCAGAAGCATTC+AGG | - | chr5_1:5560039-5560058 | Msa0713420:CDS | 45.0% |
| CTCTCCCTCAAATCCGGTTT+AGG | - | chr5_1:5559337-5559356 | Msa0713420:CDS | 50.0% | |
| AGGAAGAAGAGGGGTAGAAG+AGG | + | chr5_1:5559428-5559447 | None:intergenic | 50.0% | |
| !! | CAACGTTGGTGTTGGTGTTG+GGG | - | chr5_1:5559660-5559679 | Msa0713420:CDS | 50.0% |
| ! | GTTGGGGTGTGAGTTTTCCA+GGG | - | chr5_1:5559788-5559807 | Msa0713420:CDS | 50.0% |
| !! | AGGTGATTTGCAGGTGCTGA+AGG | - | chr5_1:5559912-5559931 | Msa0713420:CDS | 50.0% |
| CTCTCCCTCAAATCCGGTTT+AGG | - | chr5_1:5559337-5559356 | Msa0713420:CDS | 50.0% | |
| AGGAAGAAGAGGGGTAGAAG+AGG | + | chr5_1:5559428-5559447 | None:intergenic | 50.0% | |
| !! | CAACGTTGGTGTTGGTGTTG+GGG | - | chr5_1:5559660-5559679 | Msa0713420:CDS | 50.0% |
| ! | GTTGGGGTGTGAGTTTTCCA+GGG | - | chr5_1:5559788-5559807 | Msa0713420:CDS | 50.0% |
| !! | AGGTGATTTGCAGGTGCTGA+AGG | - | chr5_1:5559912-5559931 | Msa0713420:CDS | 50.0% |
| CAACCGGAAGAACACCCTTC+AGG | + | chr5_1:5559598-5559617 | None:intergenic | 55.0% | |
| !! | CTGAAGGGTGTTCTTCCGGT+TGG | - | chr5_1:5559596-5559615 | Msa0713420:CDS | 55.0% |
| TATGGCTAGGACGGTGATGC+CGG | - | chr5_1:5559738-5559757 | Msa0713420:CDS | 55.0% | |
| ! | CGTTGGGGTGTGAGTTTTCC+AGG | - | chr5_1:5559787-5559806 | Msa0713420:CDS | 55.0% |
| CAACCGGAAGAACACCCTTC+AGG | + | chr5_1:5559598-5559617 | None:intergenic | 55.0% | |
| !! | CTGAAGGGTGTTCTTCCGGT+TGG | - | chr5_1:5559596-5559615 | Msa0713420:CDS | 55.0% |
| TATGGCTAGGACGGTGATGC+CGG | - | chr5_1:5559738-5559757 | Msa0713420:CDS | 55.0% | |
| ! | CGTTGGGGTGTGAGTTTTCC+AGG | - | chr5_1:5559787-5559806 | Msa0713420:CDS | 55.0% |
| ACGGTGATGCCGGTGACACA+AGG | - | chr5_1:5559748-5559767 | Msa0713420:CDS | 60.0% | |
| CGGTGATGCCGGTGACACAA+GGG | - | chr5_1:5559749-5559768 | Msa0713420:CDS | 60.0% | |
| ACGGTGATGCCGGTGACACA+AGG | - | chr5_1:5559748-5559767 | Msa0713420:CDS | 60.0% | |
| CGGTGATGCCGGTGACACAA+GGG | - | chr5_1:5559749-5559768 | Msa0713420:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 5559085 | 5560206 | 5559085 | ID=Msa0713420;Name=Msa0713420 |
| chr5_1 | mRNA | 5559085 | 5560206 | 5559085 | ID=Msa0713420-mRNA-1;Parent=Msa0713420;Name=Msa0713420-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|373 |
| chr5_1 | exon | 5559085 | 5560206 | 5559085 | ID=Msa0713420-mRNA-1:exon:2440;Parent=Msa0713420-mRNA-1 |
| chr5_1 | CDS | 5559085 | 5560206 | 5559085 | ID=Msa0713420-mRNA-1:cds;Parent=Msa0713420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
