Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296740 | BAT96490.1 | 96.923 | 65 | 2 | 0 | 1 | 65 | 32 | 96 | 1.01e-36 | 128 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296740 | sp|P46302|RS28_MAIZE | 87.692 | 65 | 8 | 0 | 1 | 65 | 1 | 65 | 1.83e-34 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296740 | A0A0S3SUH5 | 96.923 | 65 | 2 | 0 | 1 | 65 | 32 | 96 | 4.83e-37 | 128 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003700 | Msa0296740 | 0.808659 | 2.778691e-50 | -8.615850e-47 |
| Msa0003890 | Msa0296740 | 0.803254 | 3.805541e-49 | -8.615850e-47 |
| Msa0006380 | Msa0296740 | 0.804346 | 2.258116e-49 | -8.615850e-47 |
| Msa0008670 | Msa0296740 | 0.800106 | 1.684087e-48 | -8.615850e-47 |
| Msa0011170 | Msa0296740 | 0.802300 | 5.990038e-49 | -8.615850e-47 |
| Msa0015390 | Msa0296740 | 0.804235 | 2.381316e-49 | -8.615850e-47 |
| Msa0017510 | Msa0296740 | 0.851859 | 6.742726e-61 | -8.615850e-47 |
| Msa0024210 | Msa0296740 | -0.828018 | 1.135126e-54 | -8.615850e-47 |
| Msa0027260 | Msa0296740 | 0.810977 | 8.815351e-51 | -8.615850e-47 |
| Msa0028640 | Msa0296740 | 0.805006 | 1.644347e-49 | -8.615850e-47 |
| Msa0031340 | Msa0296740 | 0.818820 | 1.605553e-52 | -8.615850e-47 |
| Msa0040690 | Msa0296740 | 0.816994 | 4.149284e-52 | -8.615850e-47 |
| Msa0044000 | Msa0296740 | 0.801795 | 7.605602e-49 | -8.615850e-47 |
| Msa0052680 | Msa0296740 | 0.810741 | 9.912797e-51 | -8.615850e-47 |
| Msa0052730 | Msa0296740 | 0.810897 | 9.171575e-51 | -8.615850e-47 |
| Msa0054480 | Msa0296740 | 0.820496 | 6.653593e-53 | -8.615850e-47 |
| Msa0074240 | Msa0296740 | 0.807502 | 4.898672e-50 | -8.615850e-47 |
| Msa0078650 | Msa0296740 | 0.809130 | 2.203084e-50 | -8.615850e-47 |
| Msa0084380 | Msa0296740 | 0.806863 | 6.690299e-50 | -8.615850e-47 |
| Msa0089630 | Msa0296740 | 0.814421 | 1.553676e-51 | -8.615850e-47 |
| Msa0090360 | Msa0296740 | 0.835414 | 1.701848e-56 | -8.615850e-47 |
| Msa0090520 | Msa0296740 | 0.804271 | 2.339950e-49 | -8.615850e-47 |
| Msa0114060 | Msa0296740 | 0.800272 | 1.558134e-48 | -8.615850e-47 |
| Msa0120010 | Msa0296740 | -0.805968 | 1.032993e-49 | -8.615850e-47 |
| Msa0120020 | Msa0296740 | -0.811614 | 6.412031e-51 | -8.615850e-47 |
| Msa0120040 | Msa0296740 | -0.807024 | 6.186101e-50 | -8.615850e-47 |
| Msa0126370 | Msa0296740 | 0.810759 | 9.823098e-51 | -8.615850e-47 |
| Msa0127800 | Msa0296740 | 0.802671 | 5.023293e-49 | -8.615850e-47 |
| Msa0137840 | Msa0296740 | 0.832217 | 1.072452e-55 | -8.615850e-47 |
| Msa0137990 | Msa0296740 | 0.805327 | 1.408356e-49 | -8.615850e-47 |
| Msa0140780 | Msa0296740 | 0.802216 | 6.233260e-49 | -8.615850e-47 |
| Msa0140820 | Msa0296740 | 0.827127 | 1.857647e-54 | -8.615850e-47 |
| Msa0142660 | Msa0296740 | 0.803617 | 3.200494e-49 | -8.615850e-47 |
| Msa0150800 | Msa0296740 | 0.806351 | 8.580671e-50 | -8.615850e-47 |
| Msa0151180 | Msa0296740 | 0.806776 | 6.979697e-50 | -8.615850e-47 |
| Msa0157290 | Msa0296740 | 0.850711 | 1.423201e-60 | -8.615850e-47 |
| Msa0160550 | Msa0296740 | 0.808962 | 2.392934e-50 | -8.615850e-47 |
| Msa0164980 | Msa0296740 | 0.808678 | 2.752595e-50 | -8.615850e-47 |
| Msa0170570 | Msa0296740 | 0.807271 | 5.483805e-50 | -8.615850e-47 |
| Msa0171290 | Msa0296740 | 0.806671 | 7.344827e-50 | -8.615850e-47 |
| Msa0172070 | Msa0296740 | 0.801432 | 9.028124e-49 | -8.615850e-47 |
| Msa0172450 | Msa0296740 | 0.801087 | 1.062132e-48 | -8.615850e-47 |
| Msa0182620 | Msa0296740 | -0.804220 | 2.397902e-49 | -8.615850e-47 |
| Msa0183900 | Msa0296740 | 0.803463 | 3.444344e-49 | -8.615850e-47 |
| Msa0184040 | Msa0296740 | 0.833170 | 6.221034e-56 | -8.615850e-47 |
| Msa0189290 | Msa0296740 | 0.802966 | 4.365996e-49 | -8.615850e-47 |
| Msa0195460 | Msa0296740 | 0.800133 | 1.662986e-48 | -8.615850e-47 |
| Msa0205230 | Msa0296740 | 0.838850 | 2.250103e-57 | -8.615850e-47 |
| Msa0205510 | Msa0296740 | 0.805235 | 1.472505e-49 | -8.615850e-47 |
| Msa0211150 | Msa0296740 | 0.837135 | 6.212632e-57 | -8.615850e-47 |
| Msa0216240 | Msa0296740 | 0.811429 | 7.033535e-51 | -8.615850e-47 |
| Msa0220580 | Msa0296740 | 0.803653 | 3.145838e-49 | -8.615850e-47 |
| Msa0222620 | Msa0296740 | 0.801497 | 8.756635e-49 | -8.615850e-47 |
| Msa0228070 | Msa0296740 | 0.823763 | 1.162503e-53 | -8.615850e-47 |
| Msa0229380 | Msa0296740 | 0.809954 | 1.465547e-50 | -8.615850e-47 |
| Msa0231650 | Msa0296740 | 0.818387 | 2.013348e-52 | -8.615850e-47 |
| Msa0231980 | Msa0296740 | 0.847409 | 1.178094e-59 | -8.615850e-47 |
| Msa0232050 | Msa0296740 | 0.829765 | 4.286859e-55 | -8.615850e-47 |
| Msa0243100 | Msa0296740 | 0.808234 | 3.422785e-50 | -8.615850e-47 |
| Msa0246430 | Msa0296740 | 0.807646 | 4.565044e-50 | -8.615850e-47 |
| Msa0257460 | Msa0296740 | 0.915131 | 8.474773e-85 | -8.615850e-47 |
| Msa0264150 | Msa0296740 | 0.808190 | 3.497292e-50 | -8.615850e-47 |
| Msa0270320 | Msa0296740 | 0.816692 | 4.850385e-52 | -8.615850e-47 |
| Msa0271530 | Msa0296740 | 0.838871 | 2.222716e-57 | -8.615850e-47 |
| Msa0280610 | Msa0296740 | 0.805270 | 1.447258e-49 | -8.615850e-47 |
| Msa0285170 | Msa0296740 | 0.802004 | 6.891767e-49 | -8.615850e-47 |
| Msa0287650 | Msa0296740 | 0.827946 | 1.180978e-54 | -8.615850e-47 |
| Msa0296740 | Msa0309750 | 0.813394 | 2.617120e-51 | -8.615850e-47 |
| Msa0296740 | Msa0334360 | 0.822340 | 2.496302e-53 | -8.615850e-47 |
| Msa0296740 | Msa0336040 | -0.805783 | 1.130070e-49 | -8.615850e-47 |
| Msa0296740 | Msa0336420 | 0.810907 | 9.126217e-51 | -8.615850e-47 |
| Msa0296740 | Msa0339250 | 0.812706 | 3.704212e-51 | -8.615850e-47 |
| Msa0296740 | Msa0341050 | 0.813205 | 2.879607e-51 | -8.615850e-47 |
| Msa0296740 | Msa0341540 | 0.808092 | 3.669992e-50 | -8.615850e-47 |
| Msa0296740 | Msa0357340 | 0.803370 | 3.601173e-49 | -8.615850e-47 |
| Msa0296740 | Msa0359030 | 0.823197 | 1.576445e-53 | -8.615850e-47 |
| Msa0296740 | Msa0366890 | 0.808935 | 2.425159e-50 | -8.615850e-47 |
| Msa0296740 | Msa0376300 | 0.811406 | 7.115126e-51 | -8.615850e-47 |
| Msa0296740 | Msa0376310 | 0.836322 | 1.001583e-56 | -8.615850e-47 |
| Msa0296740 | Msa0385580 | 0.825423 | 4.724686e-54 | -8.615850e-47 |
| Msa0296740 | Msa0388950 | 0.828955 | 6.739860e-55 | -8.615850e-47 |
| Msa0296740 | Msa0390730 | 0.816447 | 5.503283e-52 | -8.615850e-47 |
| Msa0296740 | Msa0395820 | 0.837238 | 5.847538e-57 | -8.615850e-47 |
| Msa0296740 | Msa0397750 | 0.814691 | 1.354038e-51 | -8.615850e-47 |
| Msa0296740 | Msa0402650 | 0.810114 | 1.353609e-50 | -8.615850e-47 |
| Msa0296740 | Msa0410650 | 0.817975 | 2.494960e-52 | -8.615850e-47 |
| Msa0296740 | Msa0417270 | 0.804144 | 2.487256e-49 | -8.615850e-47 |
| Msa0296740 | Msa0425400 | 0.812952 | 3.272402e-51 | -8.615850e-47 |
| Msa0296740 | Msa0428590 | 0.804178 | 2.446504e-49 | -8.615850e-47 |
| Msa0296740 | Msa0436490 | -0.814000 | 1.925040e-51 | -8.615850e-47 |
| Msa0296740 | Msa0439200 | 0.811049 | 8.501032e-51 | -8.615850e-47 |
| Msa0296740 | Msa0464680 | 0.802959 | 4.379056e-49 | -8.615850e-47 |
| Msa0296740 | Msa0467060 | 0.800816 | 1.207047e-48 | -8.615850e-47 |
| Msa0296740 | Msa0468330 | 0.818286 | 2.122297e-52 | -8.615850e-47 |
| Msa0296740 | Msa0479660 | 0.821680 | 3.550725e-53 | -8.615850e-47 |
| Msa0296740 | Msa0479970 | 0.801452 | 8.943505e-49 | -8.615850e-47 |
| Msa0296740 | Msa0481530 | 0.825754 | 3.945185e-54 | -8.615850e-47 |
| Msa0296740 | Msa0482340 | 0.800516 | 1.389350e-48 | -8.615850e-47 |
| Msa0296740 | Msa0484780 | 0.805293 | 1.431675e-49 | -8.615850e-47 |
| Msa0296740 | Msa0498650 | 0.820090 | 8.240820e-53 | -8.615850e-47 |
| Msa0296740 | Msa0507680 | 0.811386 | 7.185708e-51 | -8.615850e-47 |
| Msa0296740 | Msa0523460 | 0.807148 | 5.822035e-50 | -8.615850e-47 |
| Msa0296740 | Msa0524500 | 0.800871 | 1.176283e-48 | -8.615850e-47 |
| Msa0296740 | Msa0529680 | 0.816900 | 4.357177e-52 | -8.615850e-47 |
| Msa0296740 | Msa0529890 | 0.821396 | 4.129007e-53 | -8.615850e-47 |
| Msa0296740 | Msa0545070 | 0.837736 | 4.359840e-57 | -8.615850e-47 |
| Msa0296740 | Msa0547720 | 0.823513 | 1.330237e-53 | -8.615850e-47 |
| Msa0296740 | Msa0548240 | 0.801310 | 9.563617e-49 | -8.615850e-47 |
| Msa0296740 | Msa0551890 | 0.800491 | 1.405772e-48 | -8.615850e-47 |
| Msa0296740 | Msa0555450 | 0.822509 | 2.280026e-53 | -8.615850e-47 |
| Msa0296740 | Msa0556060 | 0.803463 | 3.443843e-49 | -8.615850e-47 |
| Msa0296740 | Msa0557070 | 0.822838 | 1.911529e-53 | -8.615850e-47 |
| Msa0296740 | Msa0569200 | 0.814410 | 1.562839e-51 | -8.615850e-47 |
| Msa0296740 | Msa0569500 | 0.802929 | 4.442593e-49 | -8.615850e-47 |
| Msa0296740 | Msa0578860 | 0.816324 | 5.863961e-52 | -8.615850e-47 |
| Msa0296740 | Msa0585560 | 0.822900 | 1.849141e-53 | -8.615850e-47 |
| Msa0296740 | Msa0592440 | 0.817848 | 2.664592e-52 | -8.615850e-47 |
| Msa0296740 | Msa0594660 | 0.805864 | 1.086606e-49 | -8.615850e-47 |
| Msa0296740 | Msa0607050 | 0.831844 | 1.325625e-55 | -8.615850e-47 |
| Msa0296740 | Msa0610430 | 0.818592 | 1.808313e-52 | -8.615850e-47 |
| Msa0296740 | Msa0613440 | 0.808557 | 2.921481e-50 | -8.615850e-47 |
| Msa0296740 | Msa0615710 | 0.820369 | 7.112880e-53 | -8.615850e-47 |
| Msa0296740 | Msa0617640 | 0.808845 | 2.535505e-50 | -8.615850e-47 |
| Msa0296740 | Msa0625070 | 0.826861 | 2.149963e-54 | -8.615850e-47 |
| Msa0296740 | Msa0625720 | 0.819694 | 1.015247e-52 | -8.615850e-47 |
| Msa0296740 | Msa0639310 | 0.830180 | 3.394700e-55 | -8.615850e-47 |
| Msa0296740 | Msa0649490 | 0.829488 | 5.005449e-55 | -8.615850e-47 |
| Msa0296740 | Msa0657970 | 0.811654 | 6.283424e-51 | -8.615850e-47 |
| Msa0296740 | Msa0662500 | 0.819085 | 1.397415e-52 | -8.615850e-47 |
| Msa0296740 | Msa0663390 | 0.825368 | 4.869120e-54 | -8.615850e-47 |
| Msa0296740 | Msa0669320 | 0.810382 | 1.185298e-50 | -8.615850e-47 |
| Msa0296740 | Msa0673460 | 0.808441 | 3.092390e-50 | -8.615850e-47 |
| Msa0296740 | Msa0682330 | 0.805723 | 1.163411e-49 | -8.615850e-47 |
| Msa0296740 | Msa0682840 | 0.802449 | 5.581769e-49 | -8.615850e-47 |
| Msa0296740 | Msa0689260 | 0.823346 | 1.455028e-53 | -8.615850e-47 |
| Msa0296740 | Msa0690150 | 0.825683 | 4.101572e-54 | -8.615850e-47 |
| Msa0296740 | Msa0698490 | 0.804157 | 2.471618e-49 | -8.615850e-47 |
| Msa0296740 | Msa0698660 | 0.804951 | 1.688239e-49 | -8.615850e-47 |
| Msa0296740 | Msa0708520 | 0.810463 | 1.138533e-50 | -8.615850e-47 |
| Msa0296740 | Msa0709500 | 0.821867 | 3.213203e-53 | -8.615850e-47 |
| Msa0296740 | Msa0711780 | 0.821624 | 3.658072e-53 | -8.615850e-47 |
| Msa0296740 | Msa0720820 | 0.817827 | 2.694188e-52 | -8.615850e-47 |
| Msa0296740 | Msa0729720 | 0.801538 | 8.589050e-49 | -8.615850e-47 |
| Msa0296740 | Msa0731940 | 0.802810 | 4.702114e-49 | -8.615850e-47 |
| Msa0296740 | Msa0743720 | 0.811267 | 7.626747e-51 | -8.615850e-47 |
| Msa0296740 | Msa0745790 | 0.801537 | 8.592574e-49 | -8.615850e-47 |
| Msa0296740 | Msa0750880 | 0.816203 | 6.240502e-52 | -8.615850e-47 |
| Msa0296740 | Msa0761940 | 0.821166 | 4.665937e-53 | -8.615850e-47 |
| Msa0296740 | Msa0788850 | 0.826864 | 2.146309e-54 | -8.615850e-47 |
| Msa0296740 | Msa0790660 | -0.806216 | 9.162647e-50 | -8.615850e-47 |
| Msa0296740 | Msa0790850 | 0.812524 | 4.059206e-51 | -8.615850e-47 |
| Msa0296740 | Msa0793800 | 0.815072 | 1.114811e-51 | -8.615850e-47 |
| Msa0296740 | Msa0794670 | 0.836868 | 7.268850e-57 | -8.615850e-47 |
| Msa0296740 | Msa0796530 | 0.819696 | 1.014055e-52 | -8.615850e-47 |
| Msa0296740 | Msa0803890 | 0.833320 | 5.705362e-56 | -8.615850e-47 |
| Msa0296740 | Msa0808080 | 0.809052 | 2.288974e-50 | -8.615850e-47 |
| Msa0296740 | Msa0808270 | 0.812126 | 4.958438e-51 | -8.615850e-47 |
| Msa0296740 | Msa0810220 | 0.807640 | 4.579924e-50 | -8.615850e-47 |
| Msa0296740 | Msa0820850 | 0.804722 | 1.884918e-49 | -8.615850e-47 |
| Msa0296740 | Msa0832340 | 0.807249 | 5.544184e-50 | -8.615850e-47 |
| Msa0296740 | Msa0841940 | 0.825062 | 5.753193e-54 | -8.615850e-47 |
| Msa0296740 | Msa0849030 | 0.806614 | 7.551936e-50 | -8.615850e-47 |
| Msa0296740 | Msa0861130 | 0.803270 | 3.777266e-49 | -8.615850e-47 |
| Msa0296740 | Msa0861870 | 0.811033 | 8.571093e-51 | -8.615850e-47 |
| Msa0296740 | Msa0871270 | 0.811274 | 7.600164e-51 | -8.615850e-47 |
| Msa0296740 | Msa0876200 | 0.812921 | 3.322957e-51 | -8.615850e-47 |
| Msa0296740 | Msa0880140 | 0.848678 | 5.257967e-60 | -8.615850e-47 |
| Msa0296740 | Msa0884410 | -0.810122 | 1.348316e-50 | -8.615850e-47 |
| Msa0296740 | Msa0893800 | 0.814175 | 1.760817e-51 | -8.615850e-47 |
| Msa0296740 | Msa0902760 | 0.849376 | 3.363958e-60 | -8.615850e-47 |
| Msa0296740 | Msa0933230 | 0.816392 | 5.664006e-52 | -8.615850e-47 |
| Msa0296740 | Msa0933310 | 0.824771 | 6.739145e-54 | -8.615850e-47 |
| Msa0296740 | Msa0936340 | 0.822763 | 1.990359e-53 | -8.615850e-47 |
| Msa0296740 | Msa0938220 | 0.809320 | 2.005537e-50 | -8.615850e-47 |
| Msa0296740 | Msa0947660 | 0.808260 | 3.379162e-50 | -8.615850e-47 |
| Msa0296740 | Msa0959360 | 0.803839 | 2.878186e-49 | -8.615850e-47 |
| Msa0296740 | Msa0963270 | 0.811711 | 6.107256e-51 | -8.615850e-47 |
| Msa0296740 | Msa0968590 | 0.836943 | 6.956328e-57 | -8.615850e-47 |
| Msa0296740 | Msa0968680 | 0.808626 | 2.823678e-50 | -8.615850e-47 |
| Msa0296740 | Msa0969520 | 0.815933 | 7.170697e-52 | -8.615850e-47 |
| Msa0296740 | Msa0970030 | 0.835417 | 1.698624e-56 | -8.615850e-47 |
| Msa0296740 | Msa0971090 | 0.826821 | 2.197598e-54 | -8.615850e-47 |
| Msa0296740 | Msa0974070 | 0.824502 | 7.794701e-54 | -8.615850e-47 |
| Msa0296740 | Msa0975340 | 0.802524 | 5.386780e-49 | -8.615850e-47 |
| Msa0296740 | Msa0980880 | 0.808516 | 2.980780e-50 | -8.615850e-47 |
| Msa0296740 | Msa0993330 | 0.806063 | 9.866304e-50 | -8.615850e-47 |
| Msa0296740 | Msa0999100 | 0.802097 | 6.593035e-49 | -8.615850e-47 |
| Msa0296740 | Msa1003620 | 0.820217 | 7.707471e-53 | -8.615850e-47 |
| Msa0296740 | Msa1004600 | 0.806904 | 6.557032e-50 | -8.615850e-47 |
| Msa0296740 | Msa1006840 | 0.829181 | 5.941494e-55 | -8.615850e-47 |
| Msa0296740 | Msa1012320 | 0.815215 | 1.036415e-51 | -8.615850e-47 |
| Msa0296740 | Msa1013400 | 0.849132 | 3.935461e-60 | -8.615850e-47 |
| Msa0296740 | Msa1040400 | 0.831067 | 2.058786e-55 | -8.615850e-47 |
| Msa0296740 | Msa1045200 | 0.801005 | 1.104351e-48 | -8.615850e-47 |
| Msa0296740 | Msa1046460 | 0.806500 | 7.983522e-50 | -8.615850e-47 |
| Msa0296740 | Msa1078170 | 0.814537 | 1.464940e-51 | -8.615850e-47 |
| Msa0296740 | Msa1081150 | 0.817018 | 4.099359e-52 | -8.615850e-47 |
| Msa0296740 | Msa1081360 | -0.808619 | 2.833187e-50 | -8.615850e-47 |
| Msa0296740 | Msa1081930 | 0.845504 | 3.897346e-59 | -8.615850e-47 |
| Msa0296740 | Msa1081980 | 0.800282 | 1.550464e-48 | -8.615850e-47 |
| Msa0296740 | Msa1082500 | 0.805891 | 1.072480e-49 | -8.615850e-47 |
| Msa0296740 | Msa1085200 | 0.819902 | 9.100136e-53 | -8.615850e-47 |
| Msa0296740 | Msa1093530 | 0.851836 | 6.843940e-61 | -8.615850e-47 |
| Msa0296740 | Msa1093840 | 0.806263 | 8.954479e-50 | -8.615850e-47 |
| Msa0296740 | Msa1100050 | 0.816410 | 5.610478e-52 | -8.615850e-47 |
| Msa0296740 | Msa1104140 | 0.805226 | 1.478691e-49 | -8.615850e-47 |
| Msa0296740 | Msa1109680 | 0.818910 | 1.531869e-52 | -8.615850e-47 |
| Msa0296740 | Msa1119480 | 0.815023 | 1.143081e-51 | -8.615850e-47 |
| Msa0296740 | Msa1121440 | 0.837764 | 4.288752e-57 | -8.615850e-47 |
| Msa0296740 | Msa1123380 | 0.812684 | 3.746516e-51 | -8.615850e-47 |
| Msa0296740 | Msa1125760 | 0.824382 | 8.319599e-54 | -8.615850e-47 |
| Msa0296740 | Msa1135470 | 0.814620 | 1.404274e-51 | -8.615850e-47 |
| Msa0296740 | Msa1137570 | 0.827195 | 1.788619e-54 | -8.615850e-47 |
| Msa0296740 | Msa1147280 | 0.807035 | 6.153120e-50 | -8.615850e-47 |
| Msa0296740 | Msa1147900 | 0.862624 | 4.441370e-64 | -8.615850e-47 |
| Msa0296740 | Msa1147970 | 0.811479 | 6.858891e-51 | -8.615850e-47 |
| Msa0296740 | Msa1151910 | 0.810763 | 9.803797e-51 | -8.615850e-47 |
| Msa0296740 | Msa1154280 | 0.809303 | 2.022782e-50 | -8.615850e-47 |
| Msa0296740 | Msa1165940 | 0.822150 | 2.762877e-53 | -8.615850e-47 |
| Msa0296740 | Msa1171360 | 0.822571 | 2.205813e-53 | -8.615850e-47 |
| Msa0296740 | Msa1172670 | 0.820703 | 5.963609e-53 | -8.615850e-47 |
| Msa0296740 | Msa1173100 | 0.811711 | 6.106381e-51 | -8.615850e-47 |
| Msa0296740 | Msa1174040 | 0.811872 | 5.634596e-51 | -8.615850e-47 |
| Msa0296740 | Msa1179460 | 0.815422 | 9.322724e-52 | -8.615850e-47 |
| Msa0296740 | Msa1187840 | 0.800386 | 1.476586e-48 | -8.615850e-47 |
| Msa0296740 | Msa1189070 | 0.811143 | 8.113337e-51 | -8.615850e-47 |
| Msa0296740 | Msa1193290 | 0.817213 | 3.705643e-52 | -8.615850e-47 |
| Msa0296740 | Msa1207270 | 0.834204 | 3.430807e-56 | -8.615850e-47 |
| Msa0296740 | Msa1209460 | 0.807069 | 6.052147e-50 | -8.615850e-47 |
| Msa0296740 | Msa1210020 | 0.814094 | 1.835639e-51 | -8.615850e-47 |
| Msa0296740 | Msa1218600 | 0.829138 | 6.087363e-55 | -8.615850e-47 |
| Msa0296740 | Msa1219010 | 0.817335 | 3.477958e-52 | -8.615850e-47 |
| Msa0296740 | Msa1245930 | 0.801760 | 7.732954e-49 | -8.615850e-47 |
| Msa0296740 | Msa1251160 | 0.802189 | 6.312050e-49 | -8.615850e-47 |
| Msa0296740 | Msa1253020 | 0.828253 | 9.960715e-55 | -8.615850e-47 |
| Msa0296740 | Msa1279400 | 0.816902 | 4.352854e-52 | -8.615850e-47 |
| Msa0296740 | Msa1284260 | 0.801186 | 1.014185e-48 | -8.615850e-47 |
| Msa0296740 | Msa1284550 | 0.803936 | 2.747313e-49 | -8.615850e-47 |
| Msa0296740 | Msa1284680 | 0.802553 | 5.311640e-49 | -8.615850e-47 |
| Msa0296740 | Msa1298510 | 0.800443 | 1.438120e-48 | -8.615850e-47 |
| Msa0296740 | Msa1303240 | 0.803355 | 3.626226e-49 | -8.615850e-47 |
| Msa0296740 | Msa1303250 | 0.822120 | 2.807543e-53 | -8.615850e-47 |
| Msa0296740 | Msa1305340 | 0.805540 | 1.270677e-49 | -8.615850e-47 |
| Msa0296740 | Msa1313140 | 0.829646 | 4.581258e-55 | -8.615850e-47 |
| Msa0296740 | Msa1320410 | 0.803884 | 2.816711e-49 | -8.615850e-47 |
| Msa0296740 | Msa1327050 | 0.802477 | 5.506009e-49 | -8.615850e-47 |
| Msa0296740 | Msa1327680 | 0.800881 | 1.170642e-48 | -8.615850e-47 |
| Msa0296740 | Msa1328710 | 0.808576 | 2.894353e-50 | -8.615850e-47 |
| Msa0296740 | Msa1331910 | 0.800007 | 1.763632e-48 | -8.615850e-47 |
| Msa0296740 | Msa1336570 | 0.809323 | 2.003240e-50 | -8.615850e-47 |
| Msa0296740 | Msa1336710 | 0.810623 | 1.051135e-50 | -8.615850e-47 |
| Msa0296740 | Msa1346370 | 0.813081 | 3.065549e-51 | -8.615850e-47 |
| Msa0296740 | Msa1353060 | 0.811341 | 7.348267e-51 | -8.615850e-47 |
| Msa0296740 | Msa1353470 | 0.833135 | 6.344557e-56 | -8.615850e-47 |
| Msa0296740 | Msa1353980 | 0.809737 | 1.632315e-50 | -8.615850e-47 |
| Msa0296740 | Msa1356440 | 0.832591 | 8.662177e-56 | -8.615850e-47 |
| Msa0296740 | Msa1358250 | 0.822007 | 2.982819e-53 | -8.615850e-47 |
| Msa0296740 | Msa1359040 | 0.816706 | 4.816330e-52 | -8.615850e-47 |
| Msa0296740 | Msa1361400 | 0.801647 | 8.159010e-49 | -8.615850e-47 |
| Msa0296740 | Msa1370070 | -0.822394 | 2.425777e-53 | -8.615850e-47 |
| Msa0296740 | Msa1371640 | 0.802638 | 5.101450e-49 | -8.615850e-47 |
| Msa0296740 | Msa1372760 | 0.806009 | 1.012781e-49 | -8.615850e-47 |
| Msa0296740 | Msa1374120 | 0.801816 | 7.533501e-49 | -8.615850e-47 |
| Msa0296740 | Msa1374550 | 0.804000 | 2.664421e-49 | -8.615850e-47 |
| Msa0296740 | Msa1375840 | 0.809254 | 2.072598e-50 | -8.615850e-47 |
| Msa0296740 | Msa1382560 | 0.800242 | 1.579648e-48 | -8.615850e-47 |
| Msa0296740 | Msa1385460 | 0.809021 | 2.325027e-50 | -8.615850e-47 |
| Msa0296740 | Msa1386780 | 0.807795 | 4.244622e-50 | -8.615850e-47 |
| Msa0296740 | Msa1392780 | 0.826871 | 2.138364e-54 | -8.615850e-47 |
| Msa0296740 | Msa1394290 | 0.831018 | 2.117200e-55 | -8.615850e-47 |
| Msa0296740 | Msa1402590 | 0.808401 | 3.153160e-50 | -8.615850e-47 |
| Msa0296740 | Msa1406430 | 0.814182 | 1.754654e-51 | -8.615850e-47 |
| Msa0296740 | Msa1411020 | 0.800669 | 1.293045e-48 | -8.615850e-47 |
| Msa0296740 | Msa1423350 | 0.807465 | 4.987979e-50 | -8.615850e-47 |
| Msa0296740 | Msa1423870 | 0.824999 | 5.952732e-54 | -8.615850e-47 |
| Msa0296740 | Msa1424750 | 0.805610 | 1.228370e-49 | -8.615850e-47 |
| Msa0296740 | Msa1432420 | 0.810991 | 8.750810e-51 | -8.615850e-47 |
| Msa0296740 | Msa1432700 | 0.803651 | 3.149503e-49 | -8.615850e-47 |
| Msa0296740 | Msa1433390 | 0.832750 | 7.911464e-56 | -8.615850e-47 |
| Msa0296740 | Msa1451160 | 0.818424 | 1.974237e-52 | -8.615850e-47 |
| Msa0296740 | Msa1452240 | 0.831879 | 1.299907e-55 | -8.615850e-47 |
| Msa0296740 | Msa1457910 | 0.817884 | 2.616039e-52 | -8.615850e-47 |
| Msa0296740 | Msa1457920 | 0.843443 | 1.396625e-58 | -8.615850e-47 |
| Msa0296740 | Msa1460390 | 0.800058 | 1.722072e-48 | -8.615850e-47 |
| Msa0296740 | Msa1466540 | 0.835387 | 1.728334e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296740 | MtrunA17_Chr6g0453811 | 96.923 | 65 | 2 | 0 | 1 | 65 | 1 | 65 | 1.44e-40 | 126 |
| Msa0296740 | MtrunA17_Chr4g0041861 | 87.692 | 65 | 8 | 0 | 1 | 65 | 1 | 65 | 5.31e-36 | 115 |
| Msa0296740 | MtrunA17_Chr6g0453911 | 80.000 | 65 | 12 | 1 | 1 | 65 | 1 | 64 | 7.50e-30 | 99.8 |
| Msa0296740 | MtrunA17_Chr8g0381481 | 85.714 | 49 | 7 | 0 | 1 | 49 | 1 | 49 | 3.27e-25 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0296740 | AT5G03850.1 | 87.692 | 65 | 7 | 1 | 1 | 65 | 1 | 64 | 3.84e-34 | 110 |
| Msa0296740 | AT3G10090.1 | 87.692 | 65 | 7 | 1 | 1 | 65 | 1 | 64 | 3.84e-34 | 110 |
| Msa0296740 | AT5G64140.1 | 86.154 | 65 | 8 | 1 | 1 | 65 | 1 | 64 | 1.89e-33 | 109 |
Find 17 sgRNAs with CRISPR-Local
Find 18 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATTGTTGTGAAAGTTAT+GGG | 0.389099 | 2_3:-50197904 | Msa0296740:CDS |
| AGAATGTATCCCTCCCTAAC+TGG | 0.428755 | 2_3:+50197793 | None:intergenic |
| TGCTATTGTTGTGAAAGTTA+TGG | 0.460517 | 2_3:-50197905 | Msa0296740:CDS |
| GAATGTGAAGGGACCAGTTA+GGG | 0.464736 | 2_3:-50197806 | Msa0296740:CDS |
| AACCTGAGTGACTTGTCCTC+TGG | 0.467654 | 2_3:+50197870 | None:intergenic |
| GGAATGTGAAGGGACCAGTT+AGG | 0.473428 | 2_3:-50197807 | Msa0296740:CDS |
| TTGCTTCTCTCTCAGACTCA+AGG | 0.498678 | 2_3:+50197764 | None:intergenic |
| GTGAAAGTTATGGGTCGTAC+TGG | 0.530087 | 2_3:-50197895 | Msa0296740:CDS |
| TGTGAAGGGACCAGTTAGGG+AGG | 0.582336 | 2_3:-50197803 | Msa0296740:CDS |
| ATCAGAATCGTCACATCATG+AGG | 0.585221 | 2_3:-50197828 | Msa0296740:CDS |
| CTTCTCTCTCAGACTCAAGG+AGG | 0.589933 | 2_3:+50197767 | None:intergenic |
| TCACATCATGAGGAATGTGA+AGG | 0.626309 | 2_3:-50197818 | Msa0296740:CDS |
| CACATCATGAGGAATGTGAA+GGG | 0.632733 | 2_3:-50197817 | Msa0296740:CDS |
| ATCCAGAGGACAAGTCACTC+AGG | 0.638739 | 2_3:-50197872 | Msa0296740:CDS |
| TTCTCTCTCAGACTCAAGGA+GGG | 0.640280 | 2_3:+50197768 | None:intergenic |
| GTGAAGGGACCAGTTAGGGA+GGG | 0.657315 | 2_3:-50197802 | Msa0296740:CDS |
| ATGGGTCGTACTGGATCCAG+AGG | 0.663896 | 2_3:-50197886 | Msa0296740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TGCTATTGTTGTGAAAGTTA+TGG | - | chr2_3:50197770-50197789 | Msa0296740:CDS | 30.0% | |
| GCTATTGTTGTGAAAGTTAT+GGG | - | chr2_3:50197771-50197790 | Msa0296740:CDS | 30.0% | |
| ! | TCAGGTTAGAGTGAAGTTTT+TGG | - | chr2_3:50197821-50197840 | Msa0296740:CDS | 35.0% |
| ATCAGAATCGTCACATCATG+AGG | - | chr2_3:50197847-50197866 | Msa0296740:CDS | 40.0% | |
| TCACATCATGAGGAATGTGA+AGG | - | chr2_3:50197857-50197876 | Msa0296740:CDS | 40.0% | |
| CACATCATGAGGAATGTGAA+GGG | - | chr2_3:50197858-50197877 | Msa0296740:CDS | 40.0% | |
| GTGAAAGTTATGGGTCGTAC+TGG | - | chr2_3:50197780-50197799 | Msa0296740:CDS | 45.0% | |
| GAATGTGAAGGGACCAGTTA+GGG | - | chr2_3:50197869-50197888 | Msa0296740:CDS | 45.0% | |
| AGAATGTATCCCTCCCTAAC+TGG | + | chr2_3:50197885-50197904 | None:intergenic | 45.0% | |
| TTCTCTCTCAGACTCAAGGA+GGG | + | chr2_3:50197910-50197929 | None:intergenic | 45.0% | |
| TTGCTTCTCTCTCAGACTCA+AGG | + | chr2_3:50197914-50197933 | None:intergenic | 45.0% | |
| ATCCAGAGGACAAGTCACTC+AGG | - | chr2_3:50197803-50197822 | Msa0296740:CDS | 50.0% | |
| ! | AACCTGAGTGACTTGTCCTC+TGG | + | chr2_3:50197808-50197827 | None:intergenic | 50.0% |
| GGAATGTGAAGGGACCAGTT+AGG | - | chr2_3:50197868-50197887 | Msa0296740:CDS | 50.0% | |
| CTTCTCTCTCAGACTCAAGG+AGG | + | chr2_3:50197911-50197930 | None:intergenic | 50.0% | |
| ATGGGTCGTACTGGATCCAG+AGG | - | chr2_3:50197789-50197808 | Msa0296740:CDS | 55.0% | |
| TGTGAAGGGACCAGTTAGGG+AGG | - | chr2_3:50197872-50197891 | Msa0296740:CDS | 55.0% | |
| GTGAAGGGACCAGTTAGGGA+GGG | - | chr2_3:50197873-50197892 | Msa0296740:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 50197750 | 50197947 | 50197750 | ID=Msa0296740;Name=Msa0296740 |
| chr2_3 | mRNA | 50197750 | 50197947 | 50197750 | ID=Msa0296740-mRNA-1;Parent=Msa0296740;Name=Msa0296740-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|-1|0|1|-1|1|1|0|65 |
| chr2_3 | exon | 50197750 | 50197947 | 50197750 | ID=Msa0296740-mRNA-1:exon:15790;Parent=Msa0296740-mRNA-1 |
| chr2_3 | CDS | 50197750 | 50197947 | 50197750 | ID=Msa0296740-mRNA-1:cds;Parent=Msa0296740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
