Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654410 | XP_003608339.1 | 80.435 | 230 | 4 | 2 | 1 | 230 | 1 | 189 | 4.73e-123 | 357 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654410 | sp|Q9C5C8|MSRB2_ARATH | 64.607 | 178 | 31 | 1 | 52 | 229 | 54 | 199 | 1.27e-77 | 235 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654410 | G7JU02 | 80.435 | 230 | 4 | 2 | 1 | 230 | 1 | 189 | 2.26e-123 | 357 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0654410 | 0.828971 | 6.682503e-55 | -8.615850e-47 |
| Msa0002110 | Msa0654410 | 0.808012 | 3.816762e-50 | -8.615850e-47 |
| Msa0004180 | Msa0654410 | 0.813598 | 2.360813e-51 | -8.615850e-47 |
| Msa0011450 | Msa0654410 | 0.820750 | 5.814873e-53 | -8.615850e-47 |
| Msa0017300 | Msa0654410 | 0.803157 | 3.985856e-49 | -8.615850e-47 |
| Msa0018610 | Msa0654410 | 0.803157 | 3.986175e-49 | -8.615850e-47 |
| Msa0027020 | Msa0654410 | 0.808850 | 2.529318e-50 | -8.615850e-47 |
| Msa0027250 | Msa0654410 | 0.838868 | 2.226104e-57 | -8.615850e-47 |
| Msa0064490 | Msa0654410 | 0.832758 | 7.874099e-56 | -8.615850e-47 |
| Msa0065670 | Msa0654410 | 0.804389 | 2.211873e-49 | -8.615850e-47 |
| Msa0075080 | Msa0654410 | 0.816814 | 4.555007e-52 | -8.615850e-47 |
| Msa0075160 | Msa0654410 | 0.824433 | 8.092933e-54 | -8.615850e-47 |
| Msa0077570 | Msa0654410 | 0.806741 | 7.098228e-50 | -8.615850e-47 |
| Msa0089700 | Msa0654410 | 0.822196 | 2.695677e-53 | -8.615850e-47 |
| Msa0093360 | Msa0654410 | 0.805078 | 1.588239e-49 | -8.615850e-47 |
| Msa0093950 | Msa0654410 | 0.827589 | 1.439100e-54 | -8.615850e-47 |
| Msa0094170 | Msa0654410 | 0.826686 | 2.367229e-54 | -8.615850e-47 |
| Msa0095810 | Msa0654410 | 0.808765 | 2.636616e-50 | -8.615850e-47 |
| Msa0095890 | Msa0654410 | 0.800523 | 1.384582e-48 | -8.615850e-47 |
| Msa0111110 | Msa0654410 | 0.817510 | 3.177156e-52 | -8.615850e-47 |
| Msa0112550 | Msa0654410 | 0.824777 | 6.716818e-54 | -8.615850e-47 |
| Msa0120100 | Msa0654410 | 0.841333 | 5.065179e-58 | -8.615850e-47 |
| Msa0120160 | Msa0654410 | 0.849520 | 3.068699e-60 | -8.615850e-47 |
| Msa0606350 | Msa0654410 | 0.819923 | 9.000465e-53 | -8.615850e-47 |
| Msa0606830 | Msa0654410 | -0.814240 | 1.704198e-51 | -8.615850e-47 |
| Msa0608720 | Msa0654410 | 0.802149 | 6.433251e-49 | -8.615850e-47 |
| Msa0645800 | Msa0654410 | 0.833130 | 6.364078e-56 | -8.615850e-47 |
| Msa0649160 | Msa0654410 | 0.811353 | 7.306053e-51 | -8.615850e-47 |
| Msa0654410 | Msa0654490 | 0.951288 | 2.801055e-109 | -8.615850e-47 |
| Msa0654410 | Msa0654850 | 0.812680 | 3.753758e-51 | -8.615850e-47 |
| Msa0654410 | Msa0673620 | 0.806673 | 7.336929e-50 | -8.615850e-47 |
| Msa0654410 | Msa0685110 | 0.831457 | 1.651167e-55 | -8.615850e-47 |
| Msa0654410 | Msa0685500 | 0.835399 | 1.716899e-56 | -8.615850e-47 |
| Msa0654410 | Msa0695250 | 0.803512 | 3.364811e-49 | -8.615850e-47 |
| Msa0654410 | Msa0699200 | 0.825268 | 5.143081e-54 | -8.615850e-47 |
| Msa0654410 | Msa0711860 | 0.803352 | 3.631682e-49 | -8.615850e-47 |
| Msa0654410 | Msa0713570 | 0.807758 | 4.323150e-50 | -8.615850e-47 |
| Msa0654410 | Msa0739820 | 0.800365 | 1.491535e-48 | -8.615850e-47 |
| Msa0654410 | Msa0751490 | 0.826457 | 2.685317e-54 | -8.615850e-47 |
| Msa0654410 | Msa0753590 | 0.846132 | 2.631407e-59 | -8.615850e-47 |
| Msa0654410 | Msa0755550 | 0.816343 | 5.806014e-52 | -8.615850e-47 |
| Msa0654410 | Msa0784780 | 0.807944 | 3.946505e-50 | -8.615850e-47 |
| Msa0654410 | Msa0788450 | 0.812055 | 5.139232e-51 | -8.615850e-47 |
| Msa0654410 | Msa0793660 | 0.816390 | 5.668284e-52 | -8.615850e-47 |
| Msa0654410 | Msa0825570 | 0.812469 | 4.173103e-51 | -8.615850e-47 |
| Msa0654410 | Msa0826540 | 0.819293 | 1.253142e-52 | -8.615850e-47 |
| Msa0654410 | Msa0829210 | 0.819571 | 1.083153e-52 | -8.615850e-47 |
| Msa0654410 | Msa0835050 | 0.801280 | 9.698720e-49 | -8.615850e-47 |
| Msa0654410 | Msa0853200 | 0.833759 | 4.433648e-56 | -8.615850e-47 |
| Msa0654410 | Msa0858250 | 0.812948 | 3.278047e-51 | -8.615850e-47 |
| Msa0654410 | Msa0864820 | 0.826745 | 2.291448e-54 | -8.615850e-47 |
| Msa0654410 | Msa0868500 | 0.825129 | 5.545300e-54 | -8.615850e-47 |
| Msa0654410 | Msa0868510 | 0.824638 | 7.241249e-54 | -8.615850e-47 |
| Msa0654410 | Msa0868520 | 0.811662 | 6.258315e-51 | -8.615850e-47 |
| Msa0654410 | Msa0869420 | 0.819585 | 1.074887e-52 | -8.615850e-47 |
| Msa0654410 | Msa0871850 | 0.815958 | 7.078360e-52 | -8.615850e-47 |
| Msa0654410 | Msa0881040 | -0.808038 | 3.768723e-50 | -8.615850e-47 |
| Msa0654410 | Msa0882480 | 0.848247 | 6.920348e-60 | -8.615850e-47 |
| Msa0654410 | Msa0935840 | 0.815175 | 1.057841e-51 | -8.615850e-47 |
| Msa0654410 | Msa0941420 | 0.806278 | 8.890526e-50 | -8.615850e-47 |
| Msa0654410 | Msa0945160 | 0.806983 | 6.310016e-50 | -8.615850e-47 |
| Msa0654410 | Msa0958960 | 0.802424 | 5.647609e-49 | -8.615850e-47 |
| Msa0654410 | Msa0960880 | 0.810594 | 1.066576e-50 | -8.615850e-47 |
| Msa0654410 | Msa0968470 | 0.815317 | 9.835437e-52 | -8.615850e-47 |
| Msa0654410 | Msa0971690 | 0.810506 | 1.114375e-50 | -8.615850e-47 |
| Msa0654410 | Msa0974470 | 0.815566 | 8.656911e-52 | -8.615850e-47 |
| Msa0654410 | Msa0978540 | 0.828400 | 9.180648e-55 | -8.615850e-47 |
| Msa0654410 | Msa0978550 | 0.822453 | 2.349750e-53 | -8.615850e-47 |
| Msa0654410 | Msa0978560 | 0.805881 | 1.077490e-49 | -8.615850e-47 |
| Msa0654410 | Msa1002550 | 0.813568 | 2.396974e-51 | -8.615850e-47 |
| Msa0654410 | Msa1031190 | 0.821643 | 3.619918e-53 | -8.615850e-47 |
| Msa0654410 | Msa1037440 | 0.811051 | 8.492980e-51 | -8.615850e-47 |
| Msa0654410 | Msa1045750 | 0.811788 | 5.876956e-51 | -8.615850e-47 |
| Msa0654410 | Msa1058550 | 0.803583 | 3.252161e-49 | -8.615850e-47 |
| Msa0654410 | Msa1070370 | 0.819927 | 8.982575e-53 | -8.615850e-47 |
| Msa0654410 | Msa1071180 | 0.806644 | 7.440990e-50 | -8.615850e-47 |
| Msa0654410 | Msa1080610 | 0.812581 | 3.944166e-51 | -8.615850e-47 |
| Msa0654410 | Msa1080680 | 0.810818 | 9.539234e-51 | -8.615850e-47 |
| Msa0654410 | Msa1091400 | 0.831645 | 1.484257e-55 | -8.615850e-47 |
| Msa0654410 | Msa1091460 | 0.849391 | 3.333164e-60 | -8.615850e-47 |
| Msa0654410 | Msa1119420 | 0.818804 | 1.618653e-52 | -8.615850e-47 |
| Msa0654410 | Msa1124460 | 0.807275 | 5.472231e-50 | -8.615850e-47 |
| Msa0654410 | Msa1124530 | 0.804867 | 1.757489e-49 | -8.615850e-47 |
| Msa0654410 | Msa1126320 | 0.826472 | 2.662597e-54 | -8.615850e-47 |
| Msa0654410 | Msa1129300 | 0.829860 | 4.063942e-55 | -8.615850e-47 |
| Msa0654410 | Msa1130150 | 0.804806 | 1.810447e-49 | -8.615850e-47 |
| Msa0654410 | Msa1134840 | 0.801473 | 8.856001e-49 | -8.615850e-47 |
| Msa0654410 | Msa1158180 | 0.821151 | 4.702820e-53 | -8.615850e-47 |
| Msa0654410 | Msa1163190 | 0.812119 | 4.976150e-51 | -8.615850e-47 |
| Msa0654410 | Msa1164720 | 0.804023 | 2.635052e-49 | -8.615850e-47 |
| Msa0654410 | Msa1167150 | 0.814181 | 1.755852e-51 | -8.615850e-47 |
| Msa0654410 | Msa1208450 | 0.836157 | 1.102922e-56 | -8.615850e-47 |
| Msa0654410 | Msa1235620 | 0.804535 | 2.062071e-49 | -8.615850e-47 |
| Msa0654410 | Msa1247200 | 0.800255 | 1.570191e-48 | -8.615850e-47 |
| Msa0654410 | Msa1251440 | 0.811908 | 5.533584e-51 | -8.615850e-47 |
| Msa0654410 | Msa1266750 | 0.812434 | 4.248312e-51 | -8.615850e-47 |
| Msa0654410 | Msa1287100 | 0.814447 | 1.533261e-51 | -8.615850e-47 |
| Msa0654410 | Msa1298390 | 0.815765 | 7.815864e-52 | -8.615850e-47 |
| Msa0654410 | Msa1303690 | 0.828004 | 1.143690e-54 | -8.615850e-47 |
| Msa0654410 | Msa1325560 | 0.829601 | 4.700020e-55 | -8.615850e-47 |
| Msa0654410 | Msa1330080 | 0.810809 | 9.581228e-51 | -8.615850e-47 |
| Msa0654410 | Msa1356600 | 0.811600 | 6.454704e-51 | -8.615850e-47 |
| Msa0654410 | Msa1363170 | 0.826592 | 2.492331e-54 | -8.615850e-47 |
| Msa0654410 | Msa1363820 | 0.803214 | 3.879656e-49 | -8.615850e-47 |
| Msa0654410 | Msa1375610 | 0.834738 | 2.519755e-56 | -8.615850e-47 |
| Msa0654410 | Msa1375650 | 0.802127 | 6.502087e-49 | -8.615850e-47 |
| Msa0654410 | Msa1376550 | 0.823105 | 1.656279e-53 | -8.615850e-47 |
| Msa0654410 | Msa1423560 | 0.809059 | 2.281609e-50 | -8.615850e-47 |
| Msa0654410 | Msa1440140 | 0.812163 | 4.867779e-51 | -8.615850e-47 |
| Msa0654410 | Msa1462700 | 0.833949 | 3.973705e-56 | -8.615850e-47 |
| Msa0122930 | Msa0654410 | 0.814799 | 1.281809e-51 | -8.615850e-47 |
| Msa0123000 | Msa0654410 | 0.811918 | 5.503719e-51 | -8.615850e-47 |
| Msa0126000 | Msa0654410 | 0.855270 | 7.063213e-62 | -8.615850e-47 |
| Msa0138680 | Msa0654410 | 0.802949 | 4.400407e-49 | -8.615850e-47 |
| Msa0162170 | Msa0654410 | 0.822857 | 1.892219e-53 | -8.615850e-47 |
| Msa0167500 | Msa0654410 | 0.842318 | 2.781946e-58 | -8.615850e-47 |
| Msa0167570 | Msa0654410 | 0.847705 | 9.764752e-60 | -8.615850e-47 |
| Msa0168410 | Msa0654410 | 0.833153 | 6.278820e-56 | -8.615850e-47 |
| Msa0177640 | Msa0654410 | 0.844555 | 7.030113e-59 | -8.615850e-47 |
| Msa0178840 | Msa0654410 | 0.816427 | 5.562594e-52 | -8.615850e-47 |
| Msa0182940 | Msa0654410 | 0.827122 | 1.862476e-54 | -8.615850e-47 |
| Msa0187590 | Msa0654410 | 0.844359 | 7.939729e-59 | -8.615850e-47 |
| Msa0211590 | Msa0654410 | 0.823764 | 1.161834e-53 | -8.615850e-47 |
| Msa0213620 | Msa0654410 | 0.821667 | 3.573608e-53 | -8.615850e-47 |
| Msa0220400 | Msa0654410 | 0.836492 | 9.064738e-57 | -8.615850e-47 |
| Msa0225190 | Msa0654410 | 0.858139 | 1.011297e-62 | -8.615850e-47 |
| Msa0225790 | Msa0654410 | 0.834136 | 3.568753e-56 | -8.615850e-47 |
| Msa0374300 | Msa0654410 | 0.805875 | 1.080779e-49 | -8.615850e-47 |
| Msa0375330 | Msa0654410 | 0.807620 | 4.623407e-50 | -8.615850e-47 |
| Msa0380400 | Msa0654410 | 0.811105 | 8.266527e-51 | -8.615850e-47 |
| Msa0380470 | Msa0654410 | 0.807507 | 4.885908e-50 | -8.615850e-47 |
| Msa0382050 | Msa0654410 | 0.822844 | 1.906331e-53 | -8.615850e-47 |
| Msa0386230 | Msa0654410 | 0.808948 | 2.409829e-50 | -8.615850e-47 |
| Msa0386280 | Msa0654410 | 0.802629 | 5.123212e-49 | -8.615850e-47 |
| Msa0397420 | Msa0654410 | 0.842512 | 2.470862e-58 | -8.615850e-47 |
| Msa0403470 | Msa0654410 | 0.808894 | 2.474994e-50 | -8.615850e-47 |
| Msa0420810 | Msa0654410 | 0.807137 | 5.854781e-50 | -8.615850e-47 |
| Msa0427600 | Msa0654410 | 0.818396 | 2.003492e-52 | -8.615850e-47 |
| Msa0429990 | Msa0654410 | 0.820375 | 7.090853e-53 | -8.615850e-47 |
| Msa0431550 | Msa0654410 | 0.824660 | 7.157633e-54 | -8.615850e-47 |
| Msa0436660 | Msa0654410 | 0.817003 | 4.129784e-52 | -8.615850e-47 |
| Msa0444770 | Msa0654410 | 0.807239 | 5.570619e-50 | -8.615850e-47 |
| Msa0467070 | Msa0654410 | 0.805964 | 1.034992e-49 | -8.615850e-47 |
| Msa0474630 | Msa0654410 | 0.801877 | 7.316583e-49 | -8.615850e-47 |
| Msa0474660 | Msa0654410 | 0.806457 | 8.151348e-50 | -8.615850e-47 |
| Msa0476170 | Msa0654410 | 0.833289 | 5.807649e-56 | -8.615850e-47 |
| Msa0476890 | Msa0654410 | 0.822028 | 2.949434e-53 | -8.615850e-47 |
| Msa0480090 | Msa0654410 | 0.806209 | 9.194291e-50 | -8.615850e-47 |
| Msa0260580 | Msa0654410 | 0.833718 | 4.540967e-56 | -8.615850e-47 |
| Msa0260640 | Msa0654410 | 0.823747 | 1.172937e-53 | -8.615850e-47 |
| Msa0261350 | Msa0654410 | 0.810429 | 1.157787e-50 | -8.615850e-47 |
| Msa0261660 | Msa0654410 | 0.837371 | 5.406213e-57 | -8.615850e-47 |
| Msa0262350 | Msa0654410 | 0.830576 | 2.717797e-55 | -8.615850e-47 |
| Msa0266330 | Msa0654410 | 0.806976 | 6.333285e-50 | -8.615850e-47 |
| Msa0299530 | Msa0654410 | 0.888372 | 6.260637e-73 | -8.615850e-47 |
| Msa0300130 | Msa0654410 | 0.822080 | 2.867607e-53 | -8.615850e-47 |
| Msa0317820 | Msa0654410 | 0.802352 | 5.843226e-49 | -8.615850e-47 |
| Msa0340700 | Msa0654410 | 0.811736 | 6.029667e-51 | -8.615850e-47 |
| Msa0341950 | Msa0654410 | 0.809570 | 1.772532e-50 | -8.615850e-47 |
| Msa0490740 | Msa0654410 | 0.810201 | 1.296610e-50 | -8.615850e-47 |
| Msa0492330 | Msa0654410 | 0.811333 | 7.376950e-51 | -8.615850e-47 |
| Msa0500580 | Msa0654410 | 0.816081 | 6.646253e-52 | -8.615850e-47 |
| Msa0506700 | Msa0654410 | 0.830914 | 2.245174e-55 | -8.615850e-47 |
| Msa0519100 | Msa0654410 | 0.819447 | 1.156061e-52 | -8.615850e-47 |
| Msa0520550 | Msa0654410 | 0.810809 | 9.581228e-51 | -8.615850e-47 |
| Msa0523490 | Msa0654410 | 0.816638 | 4.987553e-52 | -8.615850e-47 |
| Msa0542060 | Msa0654410 | 0.830853 | 2.324680e-55 | -8.615850e-47 |
| Msa0550990 | Msa0654410 | 0.823613 | 1.260471e-53 | -8.615850e-47 |
| Msa0559650 | Msa0654410 | 0.965051 | 4.169568e-124 | -8.615850e-47 |
| Msa0561450 | Msa0654410 | 0.801030 | 1.091390e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654410 | MtrunA17_Chr4g0049401 | 80.435 | 230 | 4 | 2 | 1 | 230 | 1 | 189 | 4.35e-127 | 357 |
| Msa0654410 | MtrunA17_Chr2g0286921 | 63.095 | 168 | 30 | 1 | 63 | 230 | 30 | 165 | 2.24e-73 | 220 |
| Msa0654410 | MtrunA17_Chr2g0286931 | 60.241 | 166 | 33 | 2 | 65 | 230 | 2 | 134 | 5.82e-65 | 197 |
| Msa0654410 | MtrunA17_Chr2g0286901 | 61.069 | 131 | 48 | 1 | 100 | 230 | 26 | 153 | 1.63e-54 | 172 |
| Msa0654410 | MtrunA17_Chr8g0359081 | 37.580 | 157 | 61 | 4 | 74 | 227 | 88 | 210 | 8.89e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0654410 | AT4G21860.4 | 64.607 | 178 | 31 | 1 | 52 | 229 | 54 | 199 | 1.29e-78 | 235 |
| Msa0654410 | AT4G21860.1 | 64.607 | 178 | 31 | 1 | 52 | 229 | 54 | 199 | 1.29e-78 | 235 |
| Msa0654410 | AT4G21860.3 | 64.607 | 178 | 31 | 1 | 52 | 229 | 54 | 199 | 1.29e-78 | 235 |
| Msa0654410 | AT4G04800.1 | 62.428 | 173 | 33 | 1 | 58 | 230 | 34 | 174 | 9.75e-73 | 219 |
| Msa0654410 | AT4G04830.1 | 62.651 | 166 | 30 | 1 | 65 | 230 | 2 | 135 | 8.64e-71 | 213 |
| Msa0654410 | AT4G04810.1 | 61.006 | 159 | 30 | 1 | 71 | 229 | 8 | 134 | 2.29e-65 | 199 |
| Msa0654410 | AT4G21850.1 | 55.294 | 170 | 44 | 1 | 61 | 230 | 5 | 142 | 6.66e-65 | 198 |
| Msa0654410 | AT4G21840.1 | 55.491 | 173 | 43 | 2 | 60 | 230 | 1 | 141 | 4.65e-64 | 196 |
| Msa0654410 | AT4G21830.2 | 53.801 | 171 | 47 | 1 | 60 | 230 | 1 | 139 | 2.85e-62 | 191 |
| Msa0654410 | AT4G04830.2 | 56.627 | 166 | 30 | 1 | 65 | 230 | 2 | 125 | 5.34e-61 | 187 |
| Msa0654410 | AT4G21830.1 | 55.556 | 162 | 40 | 1 | 69 | 230 | 13 | 142 | 2.78e-60 | 186 |
| Msa0654410 | AT4G04840.1 | 52.727 | 165 | 46 | 1 | 64 | 228 | 17 | 149 | 1.12e-59 | 185 |
| Msa0654410 | AT4G21860.2 | 54.688 | 128 | 26 | 1 | 52 | 179 | 54 | 149 | 3.23e-42 | 142 |
| Msa0654410 | AT4G04810.2 | 56.881 | 109 | 15 | 1 | 71 | 179 | 8 | 84 | 2.52e-36 | 124 |
| Msa0654410 | AT4G21850.2 | 48.739 | 119 | 29 | 1 | 61 | 179 | 5 | 91 | 2.19e-35 | 122 |
| Msa0654410 | AT1G53670.1 | 37.209 | 172 | 62 | 5 | 66 | 225 | 57 | 194 | 1.30e-27 | 104 |
| Msa0654410 | AT1G53670.2 | 34.302 | 172 | 60 | 6 | 66 | 225 | 57 | 187 | 2.50e-21 | 88.2 |
Find 111 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCATTCTTCCTCCGATTTC+TGG | 0.041403 | 4_3:+62598911 | None:intergenic |
| AACTATAGCAGTACTGAAAT+TGG | 0.198734 | 4_3:-62595653 | Msa0654410:three_prime_UTR |
| ATCTACCAATTCTTCTTCTT+TGG | 0.198958 | 4_3:+62599188 | None:intergenic |
| GCCTTCTATGAGGGTGTTCC+TGG | 0.207845 | 4_3:-62596016 | Msa0654410:CDS |
| AGTATCCACCGTTGTTTAAT+AGG | 0.234702 | 4_3:-62595409 | Msa0654410:three_prime_UTR |
| GGAGAATATGACAAATTCTT+TGG | 0.249999 | 4_3:-62596121 | Msa0654410:CDS |
| GGGTGGGGTGAAGGTGAATT+TGG | 0.259093 | 4_3:+62599026 | None:intergenic |
| TTATTTAAGCTACATAATTT+AGG | 0.262832 | 4_3:+62595608 | None:intergenic |
| AGAAGCAGAGGAGATTAAAT+TGG | 0.267545 | 4_3:-62596920 | Msa0654410:CDS |
| CATTTATTTCCATCCTCTCC+TGG | 0.283908 | 4_3:-62595568 | Msa0654410:three_prime_UTR |
| ATTTCTATCCTCATTCCATC+TGG | 0.297903 | 4_3:+62595856 | None:intergenic |
| CATCTCGGTCATGTATTTAA+AGG | 0.300561 | 4_3:-62595811 | Msa0654410:CDS |
| TTGTCATATTCTCCTGTTCC+AGG | 0.323050 | 4_3:+62596130 | None:intergenic |
| GAGAATATGACAAATTCTTT+GGG | 0.337073 | 4_3:-62596120 | Msa0654410:CDS |
| GTATCCACCGTTGTTTAATA+GGG | 0.342648 | 4_3:-62595408 | Msa0654410:three_prime_UTR |
| CATTGTAAATAACTAGGAAT+TGG | 0.348681 | 4_3:+62595720 | None:intergenic |
| TCAAACACAATTACACTCTA+TGG | 0.358437 | 4_3:+62595478 | None:intergenic |
| TATTGTTCCTGAGATTGTTT+TGG | 0.358920 | 4_3:-62595518 | Msa0654410:three_prime_UTR |
| GACACAATGGCGTTCGTTCG+TGG | 0.375923 | 4_3:+62595771 | None:intergenic |
| ATTTATTTCCATCCTCTCCT+GGG | 0.376995 | 4_3:-62595567 | Msa0654410:three_prime_UTR |
| TCTACAGTTGTGCAGGTTGC+GGG | 0.382998 | 4_3:-62596090 | Msa0654410:CDS |
| TCAACAACAAAATTCAATTC+CGG | 0.394212 | 4_3:-62596052 | Msa0654410:CDS |
| GAGAGAGTTGGGTGGGGTGA+AGG | 0.399554 | 4_3:+62599017 | None:intergenic |
| ACAAAATTCAATTCCGGTTG+TGG | 0.401214 | 4_3:-62596046 | Msa0654410:CDS |
| TTGTGGTTAAGGAGATGTTT+TGG | 0.410758 | 4_3:-62596869 | Msa0654410:CDS |
| CATATCCAAAGAAGAAGAAT+TGG | 0.411902 | 4_3:-62599193 | Msa0654410:five_prime_UTR |
| TCCTGGCTCGGTCCAGAAAT+CGG | 0.412246 | 4_3:-62598923 | Msa0654410:CDS |
| GTCTACAGTTGTGCAGGTTG+CGG | 0.417871 | 4_3:-62596091 | Msa0654410:CDS |
| TTTCATACCAAAACAATCTC+AGG | 0.421636 | 4_3:+62595511 | None:intergenic |
| TCCGATTTCTGGACCGAGCC+AGG | 0.422097 | 4_3:+62598922 | None:intergenic |
| GATGGAAATAAATGAACATC+TGG | 0.423523 | 4_3:+62595577 | None:intergenic |
| TCCAGGAACACCCTCATAGA+AGG | 0.426613 | 4_3:+62596015 | None:intergenic |
| CTCAGAATTCGAAACTGCTC+AGG | 0.426783 | 4_3:+62598874 | None:intergenic |
| AAGAAGAAGAATTGGTAGAT+TGG | 0.430513 | 4_3:-62599185 | Msa0654410:five_prime_UTR |
| GAGATGGTAGGGAGAGAGTT+GGG | 0.431155 | 4_3:+62599006 | None:intergenic |
| ATGTCTGCTGCACCTACTCC+TGG | 0.438702 | 4_3:-62598940 | Msa0654410:CDS |
| TTGGAGTTGAAGAGAAAGGT+AGG | 0.444884 | 4_3:+62599045 | None:intergenic |
| GTTAGAACAAATTGAGGAGA+TGG | 0.444988 | 4_3:+62599068 | None:intergenic |
| ACAAATTGAGGAGATGGGTT+TGG | 0.448728 | 4_3:+62599074 | None:intergenic |
| TGCTGCACCTACTCCTGGCT+CGG | 0.454251 | 4_3:-62598935 | Msa0654410:CDS |
| ATCCTCATTCCATCTGGGTC+CGG | 0.459799 | 4_3:+62595862 | None:intergenic |
| GAAGGCTGGCCAGCCACAAC+CGG | 0.459992 | 4_3:+62596033 | None:intergenic |
| TTTCTATCCTCATTCCATCT+GGG | 0.463849 | 4_3:+62595857 | None:intergenic |
| GATGGGTTTGGTGACGTTGA+GGG | 0.465319 | 4_3:+62599086 | None:intergenic |
| AATTCAATTCCGGTTGTGGC+TGG | 0.467338 | 4_3:-62596042 | Msa0654410:CDS |
| TTATCAAGGTACCCTGGAAC+AGG | 0.467778 | 4_3:-62596142 | Msa0654410:intron |
| ACTATAGCAGTACTGAAATT+GGG | 0.471520 | 4_3:-62595652 | Msa0654410:three_prime_UTR |
| AAATAACATGTGCTGCTTGT+GGG | 0.473497 | 4_3:-62595837 | Msa0654410:CDS |
| GAGGGAGTCTACAGTTGTGC+AGG | 0.478161 | 4_3:-62596097 | Msa0654410:CDS |
| TCCAGAAATCGGAGGAAGAA+TGG | 0.490874 | 4_3:-62598912 | Msa0654410:CDS |
| AGGAGTAGGTGCAGCAGACA+TGG | 0.492353 | 4_3:+62598942 | None:intergenic |
| AACAATCTCAGGAACAATAC+AGG | 0.494058 | 4_3:+62595522 | None:intergenic |
| GGAGATGGTAGGGAGAGAGT+TGG | 0.494986 | 4_3:+62599005 | None:intergenic |
| GAATTTGGAGTTGAAGAGAA+AGG | 0.496737 | 4_3:+62599041 | None:intergenic |
| TTAGAACAAATTGAGGAGAT+GGG | 0.498670 | 4_3:+62599069 | None:intergenic |
| GAAGCAGAGGAGATTAAATT+GGG | 0.498740 | 4_3:-62596919 | Msa0654410:CDS |
| TGGTAGGGAGAGAGTTGGGT+GGG | 0.499556 | 4_3:+62599010 | None:intergenic |
| TCTTCTTCTTTGGATATGAT+CGG | 0.499789 | 4_3:+62599198 | None:intergenic |
| TGGAGTTGAAGAGAAAGGTA+GGG | 0.502554 | 4_3:+62599046 | None:intergenic |
| ATGGTAGGGAGAGAGTTGGG+TGG | 0.512379 | 4_3:+62599009 | None:intergenic |
| CAGTCATCTTGTGTTCATCA+AGG | 0.513640 | 4_3:+62599139 | None:intergenic |
| GTAAATAACTAGGAATTGGC+TGG | 0.513940 | 4_3:+62595724 | None:intergenic |
| AGATGGGTTTGGTGACGTTG+AGG | 0.516062 | 4_3:+62599085 | None:intergenic |
| ACACAATGGCGTTCGTTCGT+GGG | 0.518853 | 4_3:+62595772 | None:intergenic |
| TTTCGAATTCTGAGGCAGAA+AGG | 0.526917 | 4_3:-62598865 | Msa0654410:CDS |
| TTTGTTGTTGACTTGTAGAG+TGG | 0.535127 | 4_3:+62596064 | None:intergenic |
| ACCACGCTTCGGCTGACGAA+TGG | 0.535443 | 4_3:+62598984 | None:intergenic |
| TGGCTGGCCAGCCTTCTATG+AGG | 0.541767 | 4_3:-62596026 | Msa0654410:CDS |
| GGTAGGGTTAGAACAAATTG+AGG | 0.542736 | 4_3:+62599062 | None:intergenic |
| GGTCATGTATTTAAAGGTGA+AGG | 0.544366 | 4_3:-62595805 | Msa0654410:CDS |
| GTGACGTTGAGGGAAGAAAG+AGG | 0.544790 | 4_3:+62599096 | None:intergenic |
| TATGACAAATTCTTTGGGGA+GGG | 0.549093 | 4_3:-62596115 | Msa0654410:CDS |
| GGTAGGGAGAGAGTTGGGTG+GGG | 0.550203 | 4_3:+62599011 | None:intergenic |
| CCACCGCGAAAACCACGCTT+CGG | 0.552502 | 4_3:+62598973 | None:intergenic |
| TTTATTTCCATCCTCTCCTG+GGG | 0.552821 | 4_3:-62595566 | Msa0654410:three_prime_UTR |
| GGCTGGCCAGCCTTCTATGA+GGG | 0.553211 | 4_3:-62596025 | Msa0654410:CDS |
| ACGTGGCGGTTTATAGCTCC+AGG | 0.554221 | 4_3:+62595998 | None:intergenic |
| TGTCATATTCTCCTGTTCCA+GGG | 0.557941 | 4_3:+62596131 | None:intergenic |
| TGGCGTTCGTTCGTGGGTGT+CGG | 0.560916 | 4_3:+62595778 | None:intergenic |
| GGACTTCATTGTAAATAACT+AGG | 0.565168 | 4_3:+62595714 | None:intergenic |
| AGATGACTGTGAATATACTA+AGG | 0.565635 | 4_3:-62599125 | Msa0654410:CDS |
| TCCATTCGTCAGCCGAAGCG+TGG | 0.570636 | 4_3:-62598985 | Msa0654410:CDS |
| GGCTGACGAATGGAGATGGT+AGG | 0.572122 | 4_3:+62598994 | None:intergenic |
| CTTCGGCTGACGAATGGAGA+TGG | 0.572282 | 4_3:+62598990 | None:intergenic |
| GTGGCAGGGAGGAGAAGCAG+AGG | 0.575142 | 4_3:-62596932 | Msa0654410:intron |
| GTATTATTATCAAGGTACCC+TGG | 0.575400 | 4_3:-62596148 | Msa0654410:intron |
| TCAGAATTCGAAACTGCTCA+GGG | 0.577261 | 4_3:+62598875 | None:intergenic |
| GGAACACCCTCATAGAAGGC+TGG | 0.578117 | 4_3:+62596019 | None:intergenic |
| GAAATAACATGTGCTGCTTG+TGG | 0.579814 | 4_3:-62595838 | Msa0654410:CDS |
| AGCCGGACCCAGATGGAATG+AGG | 0.581127 | 4_3:-62595864 | Msa0654410:CDS |
| AATAACATGTGCTGCTTGTG+GGG | 0.586603 | 4_3:-62595836 | Msa0654410:CDS |
| ATATGACAAATTCTTTGGGG+AGG | 0.589338 | 4_3:-62596116 | Msa0654410:CDS |
| CACCACCAGCCGGACCCAGA+TGG | 0.591335 | 4_3:-62595871 | Msa0654410:intron |
| CTGAGCAGTTTCGAATTCTG+AGG | 0.595443 | 4_3:-62598873 | Msa0654410:CDS |
| GCTGACGAATGGAGATGGTA+GGG | 0.596509 | 4_3:+62598995 | None:intergenic |
| GAGGAGATTAAATTGGGCAG+AGG | 0.599908 | 4_3:-62596913 | Msa0654410:CDS |
| TATCCACCGTTGTTTAATAG+GGG | 0.600305 | 4_3:-62595407 | Msa0654410:three_prime_UTR |
| TTCTGGACCGAGCCAGGAGT+AGG | 0.614503 | 4_3:+62598928 | None:intergenic |
| GTGAAATGCTATTGACACAA+TGG | 0.617327 | 4_3:+62595758 | None:intergenic |
| TTATTTCCATCCTCTCCTGG+GGG | 0.622985 | 4_3:-62595565 | Msa0654410:three_prime_UTR |
| TGGGACTGTGGCTTATAGAG+TGG | 0.633677 | 4_3:-62595633 | Msa0654410:three_prime_UTR |
| CAGTACTGAAATTGGGACTG+TGG | 0.640736 | 4_3:-62595645 | Msa0654410:three_prime_UTR |
| TTACAATGAAGTCCACTCTG+TGG | 0.644295 | 4_3:-62595705 | Msa0654410:three_prime_UTR |
| TCCATGCCCCTATTAAACAA+CGG | 0.649561 | 4_3:+62595401 | None:intergenic |
| AGAATATGACAAATTCTTTG+GGG | 0.674356 | 4_3:-62596119 | Msa0654410:CDS |
| TGGCTCGGTCCAGAAATCGG+AGG | 0.678535 | 4_3:-62598920 | Msa0654410:CDS |
| ATAACATGTGCTGCTTGTGG+GGG | 0.687021 | 4_3:-62595835 | Msa0654410:CDS |
| CATATGATGTATCCACAGAG+TGG | 0.689508 | 4_3:+62595693 | None:intergenic |
| CAGAATTCGAAACTGCTCAG+GGG | 0.702893 | 4_3:+62598876 | None:intergenic |
| ATGCCCCTATTAAACAACGG+TGG | 0.711599 | 4_3:+62595404 | None:intergenic |
| GATACATCATATGATGCACA+TGG | 0.773043 | 4_3:-62595683 | Msa0654410:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTTTATTTTTTAAGTAAA+AGG | - | chr4_3:62596991-62597010 | Msa0654410:intron | 10.0% |
| !!! | ACTTAATTGATTTTAAATTT+TGG | + | chr4_3:62597063-62597082 | None:intergenic | 10.0% |
| !!! | TTAGTTTTTTTTGAAATAAA+TGG | - | chr4_3:62597271-62597290 | Msa0654410:intron | 10.0% |
| !!! | TAGTTTTTTTTGAAATAAAT+GGG | - | chr4_3:62597272-62597291 | Msa0654410:intron | 10.0% |
| !! | ATATAATTATATATGATAGT+GGG | + | chr4_3:62598092-62598111 | None:intergenic | 10.0% |
| !! | TATATAATTATATATGATAG+TGG | + | chr4_3:62598093-62598112 | None:intergenic | 10.0% |
| !!! | AGTTTTTTTTGAAATAAATG+GGG | - | chr4_3:62597273-62597292 | Msa0654410:intron | 15.0% |
| !!! | TTTGTTTATAATTTTTTTGG+AGG | - | chr4_3:62598123-62598142 | Msa0654410:intron | 15.0% |
| !!! | ATGATTTTGTCATATTAAAT+TGG | - | chr4_3:62598189-62598208 | Msa0654410:intron | 15.0% |
| !! | TTATTTAAGCTACATAATTT+AGG | + | chr4_3:62599005-62599024 | None:intergenic | 15.0% |
| !! | TTTATTAAAAACAGCTTAAT+AGG | + | chr4_3:62599159-62599178 | None:intergenic | 15.0% |
| !! | TTTCATAGTACTATATTACA+TGG | + | chr4_3:62595983-62596002 | None:intergenic | 20.0% |
| !! | TTTATTATGGCTTAATGAAA+TGG | - | chr4_3:62596022-62596041 | Msa0654410:CDS | 20.0% |
| !!! | ACTTTAACTTCATTTTCTAA+AGG | - | chr4_3:62596089-62596108 | Msa0654410:CDS | 20.0% |
| !! | AAAAATTGTCCCAAAATATA+TGG | - | chr4_3:62596540-62596559 | Msa0654410:intron | 20.0% |
| !! | TATTAATTAGAGTGTAGAAT+TGG | + | chr4_3:62596604-62596623 | None:intergenic | 20.0% |
| !!! | ATCAAAAAGCTCAATTATTT+TGG | - | chr4_3:62596790-62596809 | Msa0654410:intron | 20.0% |
| !!! | TCAAAAAGCTCAATTATTTT+GGG | - | chr4_3:62596791-62596810 | Msa0654410:intron | 20.0% |
| !! | AATATATTAGCACAAGAAAT+GGG | + | chr4_3:62596880-62596899 | None:intergenic | 20.0% |
| !!! | CATATTTTGCAAATATACAT+GGG | - | chr4_3:62596959-62596978 | Msa0654410:intron | 20.0% |
| !!! | ATATTTTGCAAATATACATG+GGG | - | chr4_3:62596960-62596979 | Msa0654410:intron | 20.0% |
| !! | TATTATAACATTTAAGTCTG+TGG | - | chr4_3:62597337-62597356 | Msa0654410:intron | 20.0% |
| !! | AAATAATGTGATACAGAAAA+TGG | + | chr4_3:62597422-62597441 | None:intergenic | 20.0% |
| !!! | TATATCCTTTTCCATTTAAA+GGG | + | chr4_3:62597581-62597600 | None:intergenic | 20.0% |
| !! | ATTAACATATGGAGATATAA+GGG | - | chr4_3:62597605-62597624 | Msa0654410:intron | 20.0% |
| !! | TAAACATGCAATAAATTTGT+TGG | - | chr4_3:62597880-62597899 | Msa0654410:intron | 20.0% |
| !! | TCCTAACATGATAATATTAA+TGG | - | chr4_3:62597949-62597968 | Msa0654410:intron | 20.0% |
| !! | CCTAACATGATAATATTAAT+GGG | - | chr4_3:62597950-62597969 | Msa0654410:intron | 20.0% |
| !!! | CATATTAAATTGGTAATCTT+AGG | - | chr4_3:62598199-62598218 | Msa0654410:intron | 20.0% |
| !!! | TTTCACATGTTATATCTTTT+TGG | - | chr4_3:62598251-62598270 | Msa0654410:intron | 20.0% |
| !!! | ATGTTTTGGTATTATTATCA+AGG | - | chr4_3:62598454-62598473 | Msa0654410:intron | 20.0% |
| !!! | TGAAACACATAAATTTTATC+AGG | + | chr4_3:62598721-62598740 | None:intergenic | 20.0% |
| ! | TTGAGCTATTTATCCAAATA+GGG | - | chr4_3:62595925-62595944 | Msa0654410:intron | 25.0% |
| ! | ATATAGTACTATGAAAACCA+TGG | - | chr4_3:62595987-62596006 | Msa0654410:intron | 25.0% |
| !!! | GTAAGTGGTAAGTTTTATTA+TGG | - | chr4_3:62596009-62596028 | Msa0654410:CDS | 25.0% |
| ! | ATTATTATCCACACACTATA+TGG | - | chr4_3:62596283-62596302 | Msa0654410:intron | 25.0% |
| !! | ATTCGTGTTATAAGTTTTTG+AGG | + | chr4_3:62596390-62596409 | None:intergenic | 25.0% |
| ! | TCAAAAACTTATAACACGAA+TGG | - | chr4_3:62596389-62596408 | Msa0654410:intron | 25.0% |
| ! | TTAGAAGTAATTTCAGAGAT+GGG | + | chr4_3:62596429-62596448 | None:intergenic | 25.0% |
| !! | ACAAAAGGCTCAATTATTTT+GGG | + | chr4_3:62596517-62596536 | None:intergenic | 25.0% |
| !! | AACAAAAGGCTCAATTATTT+TGG | + | chr4_3:62596518-62596537 | None:intergenic | 25.0% |
| !!! | GGGACAATTTTTTTAACAAA+AGG | + | chr4_3:62596532-62596551 | None:intergenic | 25.0% |
| ! | AAAGGTGATTAATATTGCAT+TGG | + | chr4_3:62596579-62596598 | None:intergenic | 25.0% |
| ! | GGTAAGAAAAAAATTCTGAA+TGG | + | chr4_3:62596859-62596878 | None:intergenic | 25.0% |
| ! | CAATATATTAGCACAAGAAA+TGG | + | chr4_3:62596881-62596900 | None:intergenic | 25.0% |
| !! | GCATATTTTGCAAATATACA+TGG | - | chr4_3:62596958-62596977 | Msa0654410:intron | 25.0% |
| ! | TCAATTAAGTACAAACACTA+TGG | - | chr4_3:62597073-62597092 | Msa0654410:intron | 25.0% |
| !! | TGATGTGACAATTATAGTTT+TGG | - | chr4_3:62597127-62597146 | Msa0654410:intron | 25.0% |
| !! | GATGTGACAATTATAGTTTT+GGG | - | chr4_3:62597128-62597147 | Msa0654410:intron | 25.0% |
| ! | ATCATACTTGAAATGTAACT+AGG | - | chr4_3:62597157-62597176 | Msa0654410:intron | 25.0% |
| ! | TCATACTTGAAATGTAACTA+GGG | - | chr4_3:62597158-62597177 | Msa0654410:intron | 25.0% |
| ! | TAGAGTTACAAAAAAAGTAG+AGG | + | chr4_3:62597199-62597218 | None:intergenic | 25.0% |
| ! | TGTAACTCTATGTTGAATTA+AGG | - | chr4_3:62597209-62597228 | Msa0654410:intron | 25.0% |
| !!! | TTTTTTGAAATAAATGGGGT+CGG | - | chr4_3:62597277-62597296 | Msa0654410:intron | 25.0% |
| ! | ATTACATATGCTCAATTATG+CGG | + | chr4_3:62597451-62597470 | None:intergenic | 25.0% |
| !! | CTATATCCTTTTCCATTTAA+AGG | + | chr4_3:62597582-62597601 | None:intergenic | 25.0% |
| ! | TTAAATGGAAAAGGATATAG+AGG | - | chr4_3:62597582-62597601 | Msa0654410:intron | 25.0% |
| ! | GATTAACATATGGAGATATA+AGG | - | chr4_3:62597604-62597623 | Msa0654410:intron | 25.0% |
| ! | TGTTTGTGTGATATTATCAT+AGG | - | chr4_3:62597652-62597671 | Msa0654410:intron | 25.0% |
| !! | ATTAGAAGTTTTGCAGTAAA+TGG | - | chr4_3:62597766-62597785 | Msa0654410:intron | 25.0% |
| ! | CCCATTAATATTATCATGTT+AGG | + | chr4_3:62597953-62597972 | None:intergenic | 25.0% |
| !! | ATAGCATTTTATCTTACTTG+AGG | - | chr4_3:62597978-62597997 | Msa0654410:intron | 25.0% |
| ! | ATATTAAACTCAAACAGTTC+AGG | + | chr4_3:62598312-62598331 | None:intergenic | 25.0% |
| !! | CATTTTCTTGTTAACAGAAA+AGG | + | chr4_3:62598437-62598456 | None:intergenic | 25.0% |
| !! | CTGTTAACAAGAAAATGTTT+TGG | - | chr4_3:62598440-62598459 | Msa0654410:intron | 25.0% |
| ! | GAGAATATGACAAATTCTTT+GGG | - | chr4_3:62598490-62598509 | Msa0654410:intron | 25.0% |
| ! | AGAATATGACAAATTCTTTG+GGG | - | chr4_3:62598491-62598510 | Msa0654410:intron | 25.0% |
| ! | TCAACAACAAAATTCAATTC+CGG | - | chr4_3:62598558-62598577 | Msa0654410:intron | 25.0% |
| ! | CATTGTAAATAACTAGGAAT+TGG | + | chr4_3:62598893-62598912 | None:intergenic | 25.0% |
| TCTTCTTCTTTGGATATGAT+CGG | + | chr4_3:62595415-62595434 | None:intergenic | 30.0% | |
| CATATCCAAAGAAGAAGAAT+TGG | - | chr4_3:62595417-62595436 | Msa0654410:three_prime_UTR | 30.0% | |
| ATCTACCAATTCTTCTTCTT+TGG | + | chr4_3:62595425-62595444 | None:intergenic | 30.0% | |
| AAGAAGAAGAATTGGTAGAT+TGG | - | chr4_3:62595425-62595444 | Msa0654410:three_prime_UTR | 30.0% | |
| AGATGACTGTGAATATACTA+AGG | - | chr4_3:62595485-62595504 | Msa0654410:three_prime_UTR | 30.0% | |
| TTAGAACAAATTGAGGAGAT+GGG | + | chr4_3:62595544-62595563 | None:intergenic | 30.0% | |
| GTTGAGCTATTTATCCAAAT+AGG | - | chr4_3:62595924-62595943 | Msa0654410:intron | 30.0% | |
| TATTTATCCAAATAGGGAAC+AGG | - | chr4_3:62595931-62595950 | Msa0654410:intron | 30.0% | |
| ATTTATCCAAATAGGGAACA+GGG | - | chr4_3:62595932-62595951 | Msa0654410:intron | 30.0% | |
| ATAAAACTTACCACTTACCA+TGG | + | chr4_3:62596007-62596026 | None:intergenic | 30.0% | |
| !! | ACTTCATTTTCTAAAGGAGA+AGG | - | chr4_3:62596095-62596114 | Msa0654410:CDS | 30.0% |
| !! | CTTCATTTTCTAAAGGAGAA+GGG | - | chr4_3:62596096-62596115 | Msa0654410:CDS | 30.0% |
| !!! | TTTTGAGGTTAGAAGAGTTA+GGG | + | chr4_3:62596375-62596394 | None:intergenic | 30.0% |
| !!! | TTTTTGAGGTTAGAAGAGTT+AGG | + | chr4_3:62596376-62596395 | None:intergenic | 30.0% |
| GTTAGAAGTAATTTCAGAGA+TGG | + | chr4_3:62596430-62596449 | None:intergenic | 30.0% | |
| !! | CTCTGAAATTACTTCTAACA+TGG | - | chr4_3:62596431-62596450 | Msa0654410:intron | 30.0% |
| ! | TGAAATGGGCCATATATTTT+GGG | + | chr4_3:62596552-62596571 | None:intergenic | 30.0% |
| ATTGCATTGGAAAGTGAAAT+GGG | + | chr4_3:62596566-62596585 | None:intergenic | 30.0% | |
| TATTGCATTGGAAAGTGAAA+TGG | + | chr4_3:62596567-62596586 | None:intergenic | 30.0% | |
| TAGAGTGTAGAATTGGAAAA+AGG | + | chr4_3:62596597-62596616 | None:intergenic | 30.0% | |
| CCATTATCATAAATGCAAAG+TGG | + | chr4_3:62596657-62596676 | None:intergenic | 30.0% | |
| CCACTTTGCATTTATGATAA+TGG | - | chr4_3:62596654-62596673 | Msa0654410:intron | 30.0% | |
| AATGCATCAATACTTAGACA+AGG | - | chr4_3:62596679-62596698 | Msa0654410:intron | 30.0% | |
| !!! | AAAGCTCAATTATTTTGGGA+CGG | - | chr4_3:62596795-62596814 | Msa0654410:intron | 30.0% |
| ! | TAACGACTTTTCAACTGATT+TGG | - | chr4_3:62597017-62597036 | Msa0654410:intron | 30.0% |
| GGATATAGAGGATTAACATA+TGG | - | chr4_3:62597594-62597613 | Msa0654410:intron | 30.0% | |
| ! | ATAAGGGCTTCATATGATTT+TGG | - | chr4_3:62597621-62597640 | Msa0654410:intron | 30.0% |
| ! | TTTTAGGCTTTTTGTGGTTA+AGG | - | chr4_3:62597730-62597749 | Msa0654410:intron | 30.0% |
| !! | GCAATAAATTTGTTGGAGTA+TGG | - | chr4_3:62597887-62597906 | Msa0654410:intron | 30.0% |
| !! | ATTTGTTGGAGTATGGTTTT+TGG | - | chr4_3:62597894-62597913 | Msa0654410:intron | 30.0% |
| ! | TTTGTTGGAGTATGGTTTTT+GGG | - | chr4_3:62597895-62597914 | Msa0654410:intron | 30.0% |
| TATCATGTTAGGAGATTTAG+TGG | + | chr4_3:62597942-62597961 | None:intergenic | 30.0% | |
| CAATTGTTAAATGTGTAGTC+TGG | - | chr4_3:62598163-62598182 | Msa0654410:intron | 30.0% | |
| !! | TCAAGTTGACAGAAAAGTAT+CGG | + | chr4_3:62598372-62598391 | None:intergenic | 30.0% |
| GGAGAATATGACAAATTCTT+TGG | - | chr4_3:62598489-62598508 | Msa0654410:intron | 30.0% | |
| TAAGAACAAATAAACTCACG+TGG | + | chr4_3:62598632-62598651 | None:intergenic | 30.0% | |
| GGACTTCATTGTAAATAACT+AGG | + | chr4_3:62598899-62598918 | None:intergenic | 30.0% | |
| ! | AACTATAGCAGTACTGAAAT+TGG | - | chr4_3:62598957-62598976 | Msa0654410:CDS | 30.0% |
| ! | ACTATAGCAGTACTGAAATT+GGG | - | chr4_3:62598958-62598977 | Msa0654410:CDS | 30.0% |
| GATGGAAATAAATGAACATC+TGG | + | chr4_3:62599036-62599055 | None:intergenic | 30.0% | |
| ! | TATTGTTCCTGAGATTGTTT+TGG | - | chr4_3:62599092-62599111 | Msa0654410:CDS | 30.0% |
| TTTCATACCAAAACAATCTC+AGG | + | chr4_3:62599102-62599121 | None:intergenic | 30.0% | |
| TCAAACACAATTACACTCTA+TGG | + | chr4_3:62599135-62599154 | None:intergenic | 30.0% | |
| GTTAGAACAAATTGAGGAGA+TGG | + | chr4_3:62595545-62595564 | None:intergenic | 35.0% | |
| ! | GAATTTGGAGTTGAAGAGAA+AGG | + | chr4_3:62595572-62595591 | None:intergenic | 35.0% |
| GAGAGATGAAATAACGTACT+CGG | + | chr4_3:62595773-62595792 | None:intergenic | 35.0% | |
| ATAGCTCAACTAAGAGCTTA+TGG | + | chr4_3:62595914-62595933 | None:intergenic | 35.0% | |
| ACTATGAAAACCATGGTAAG+TGG | - | chr4_3:62595994-62596013 | Msa0654410:intron | 35.0% | |
| AAGATTTCCTACATAGAAGC+TGG | + | chr4_3:62596054-62596073 | None:intergenic | 35.0% | |
| GATGATCTGGTTAAGTTAAG+TGG | - | chr4_3:62596125-62596144 | Msa0654410:CDS | 35.0% | |
| TGCTCAGTGTCATATAAGTT+AGG | - | chr4_3:62596212-62596231 | Msa0654410:intron | 35.0% | |
| ! | ATCCACACACTATATGGTTT+TGG | - | chr4_3:62596289-62596308 | Msa0654410:intron | 35.0% |
| GGGATTCAGAAATACAGAAA+TGG | + | chr4_3:62596355-62596374 | None:intergenic | 35.0% | |
| ! | AGAGATGGGTTCAAAAATGT+TGG | + | chr4_3:62596415-62596434 | None:intergenic | 35.0% |
| !!! | AAGGCTCAATTATTTTGGGA+CGG | + | chr4_3:62596513-62596532 | None:intergenic | 35.0% |
| ! | GTGAAATGGGCCATATATTT+TGG | + | chr4_3:62596553-62596572 | None:intergenic | 35.0% |
| CTTATCAGAGATGCGAATTA+AGG | - | chr4_3:62597383-62597402 | Msa0654410:intron | 35.0% | |
| ! | TTTTACTCACGCTCTTTGAA+AGG | - | chr4_3:62597526-62597545 | Msa0654410:intron | 35.0% |
| TGATGCCCTTTAAATGGAAA+AGG | - | chr4_3:62597573-62597592 | Msa0654410:intron | 35.0% | |
| GTGATATTATCATAGGCATG+TGG | - | chr4_3:62597659-62597678 | Msa0654410:intron | 35.0% | |
| AGAAGCAGAGGAGATTAAAT+TGG | - | chr4_3:62597690-62597709 | Msa0654410:intron | 35.0% | |
| GAAGCAGAGGAGATTAAATT+GGG | - | chr4_3:62597691-62597710 | Msa0654410:intron | 35.0% | |
| !! | GCAATGTTTTAGGCTTTTTG+TGG | - | chr4_3:62597724-62597743 | Msa0654410:intron | 35.0% |
| ! | TTGTGGTTAAGGAGATGTTT+TGG | - | chr4_3:62597741-62597760 | Msa0654410:intron | 35.0% |
| TTGCAGTAAATGGTTAGAGA+AGG | - | chr4_3:62597776-62597795 | Msa0654410:intron | 35.0% | |
| TGCAGTAAATGGTTAGAGAA+GGG | - | chr4_3:62597777-62597796 | Msa0654410:intron | 35.0% | |
| ! | TTGTTGGAGTATGGTTTTTG+GGG | - | chr4_3:62597896-62597915 | Msa0654410:intron | 35.0% |
| ! | GCATTTTATCTTACTTGAGG+TGG | - | chr4_3:62597981-62598000 | Msa0654410:intron | 35.0% |
| !! | ATATGATAGTGGGTGATAGT+GGG | + | chr4_3:62598082-62598101 | None:intergenic | 35.0% |
| !! | TATATGATAGTGGGTGATAG+TGG | + | chr4_3:62598083-62598102 | None:intergenic | 35.0% |
| TAACATGTGAAACATACTGC+AGG | + | chr4_3:62598243-62598262 | None:intergenic | 35.0% | |
| ! | GTATTATTATCAAGGTACCC+TGG | - | chr4_3:62598462-62598481 | Msa0654410:intron | 35.0% |
| ! | ATATGACAAATTCTTTGGGG+AGG | - | chr4_3:62598494-62598513 | Msa0654410:intron | 35.0% |
| ! | TATGACAAATTCTTTGGGGA+GGG | - | chr4_3:62598495-62598514 | Msa0654410:intron | 35.0% |
| !! | TTTGTTGTTGACTTGTAGAG+TGG | + | chr4_3:62598549-62598568 | None:intergenic | 35.0% |
| ACAAAATTCAATTCCGGTTG+TGG | - | chr4_3:62598564-62598583 | Msa0654410:intron | 35.0% | |
| ATCCAAAGATAGTGAAGAGA+AGG | + | chr4_3:62598660-62598679 | None:intergenic | 35.0% | |
| TTTCTATCCTCATTCCATCT+GGG | + | chr4_3:62598756-62598775 | None:intergenic | 35.0% | |
| ATTTCTATCCTCATTCCATC+TGG | + | chr4_3:62598757-62598776 | None:intergenic | 35.0% | |
| !! | AAATAACATGTGCTGCTTGT+GGG | - | chr4_3:62598773-62598792 | Msa0654410:intron | 35.0% |
| CATCTCGGTCATGTATTTAA+AGG | - | chr4_3:62598799-62598818 | Msa0654410:intron | 35.0% | |
| GGTCATGTATTTAAAGGTGA+AGG | - | chr4_3:62598805-62598824 | Msa0654410:intron | 35.0% | |
| GTGAAATGCTATTGACACAA+TGG | + | chr4_3:62598855-62598874 | None:intergenic | 35.0% | |
| GTAAATAACTAGGAATTGGC+TGG | + | chr4_3:62598889-62598908 | None:intergenic | 35.0% | |
| GATACATCATATGATGCACA+TGG | - | chr4_3:62598927-62598946 | Msa0654410:CDS | 35.0% | |
| ATTTATTTCCATCCTCTCCT+GGG | - | chr4_3:62599043-62599062 | Msa0654410:CDS | 35.0% | |
| AACAATCTCAGGAACAATAC+AGG | + | chr4_3:62599091-62599110 | None:intergenic | 35.0% | |
| AGTATCCACCGTTGTTTAAT+AGG | - | chr4_3:62599201-62599220 | Msa0654410:five_prime_UTR | 35.0% | |
| GTATCCACCGTTGTTTAATA+GGG | - | chr4_3:62599202-62599221 | Msa0654410:five_prime_UTR | 35.0% | |
| TATCCACCGTTGTTTAATAG+GGG | - | chr4_3:62599203-62599222 | Msa0654410:five_prime_UTR | 35.0% | |
| CAGTCATCTTGTGTTCATCA+AGG | + | chr4_3:62595474-62595493 | None:intergenic | 40.0% | |
| ! | ACAAATTGAGGAGATGGGTT+TGG | + | chr4_3:62595539-62595558 | None:intergenic | 40.0% |
| GGTAGGGTTAGAACAAATTG+AGG | + | chr4_3:62595551-62595570 | None:intergenic | 40.0% | |
| TGGAGTTGAAGAGAAAGGTA+GGG | + | chr4_3:62595567-62595586 | None:intergenic | 40.0% | |
| TTGGAGTTGAAGAGAAAGGT+AGG | + | chr4_3:62595568-62595587 | None:intergenic | 40.0% | |
| TCAGAATTCGAAACTGCTCA+GGG | + | chr4_3:62595738-62595757 | None:intergenic | 40.0% | |
| !! | TTTCGAATTCTGAGGCAGAA+AGG | - | chr4_3:62595745-62595764 | Msa0654410:CDS | 40.0% |
| TAACTTCCCTGTTCCCTATT+TGG | + | chr4_3:62595941-62595960 | None:intergenic | 40.0% | |
| AGCCAAAACCATATAGTGTG+TGG | + | chr4_3:62596294-62596313 | None:intergenic | 40.0% | |
| !!! | CTCAATTATTTTGGGACGGA+GGG | + | chr4_3:62596799-62596818 | None:intergenic | 40.0% |
| !!! | CTCAATTATTTTGGGACGGA+GGG | - | chr4_3:62596799-62596818 | Msa0654410:intron | 40.0% |
| TGGATAGAACATGCTGAAAG+AGG | - | chr4_3:62597037-62597056 | Msa0654410:intron | 40.0% | |
| ACAAACACTATGGCTGACAT+CGG | - | chr4_3:62597083-62597102 | Msa0654410:intron | 40.0% | |
| ! | CTGTACTGATGCCCTTTAAA+TGG | - | chr4_3:62597567-62597586 | Msa0654410:intron | 40.0% |
| TATTATCATAGGCATGTGGC+AGG | - | chr4_3:62597663-62597682 | Msa0654410:intron | 40.0% | |
| ATTATCATAGGCATGTGGCA+GGG | - | chr4_3:62597664-62597683 | Msa0654410:intron | 40.0% | |
| AGTAAATGGTTAGAGAAGGG+AGG | - | chr4_3:62597780-62597799 | Msa0654410:intron | 40.0% | |
| TGATGCAGTAGAAGTTTAGC+AGG | - | chr4_3:62597805-62597824 | Msa0654410:intron | 40.0% | |
| TAGAAGTTTAGCAGGTGTCA+AGG | - | chr4_3:62597813-62597832 | Msa0654410:intron | 40.0% | |
| AGAAGTTTAGCAGGTGTCAA+GGG | - | chr4_3:62597814-62597833 | Msa0654410:intron | 40.0% | |
| !!! | TTTTGGGGCAGTGATGTTAT+TGG | - | chr4_3:62597911-62597930 | Msa0654410:intron | 40.0% |
| TGTCATATTCTCCTGTTCCA+GGG | + | chr4_3:62598482-62598501 | None:intergenic | 40.0% | |
| TTGTCATATTCTCCTGTTCC+AGG | + | chr4_3:62598483-62598502 | None:intergenic | 40.0% | |
| GAACAAATAAACTCACGTGG+CGG | + | chr4_3:62598629-62598648 | None:intergenic | 40.0% | |
| TGCCTTCTCTTCACTATCTT+TGG | - | chr4_3:62598655-62598674 | Msa0654410:intron | 40.0% | |
| !! | GAAATAACATGTGCTGCTTG+TGG | - | chr4_3:62598772-62598791 | Msa0654410:intron | 40.0% |
| !! | AATAACATGTGCTGCTTGTG+GGG | - | chr4_3:62598774-62598793 | Msa0654410:intron | 40.0% |
| TTACAATGAAGTCCACTCTG+TGG | - | chr4_3:62598905-62598924 | Msa0654410:CDS | 40.0% | |
| CATATGATGTATCCACAGAG+TGG | + | chr4_3:62598920-62598939 | None:intergenic | 40.0% | |
| CATTTATTTCCATCCTCTCC+TGG | - | chr4_3:62599042-62599061 | Msa0654410:CDS | 40.0% | |
| TTTATTTCCATCCTCTCCTG+GGG | - | chr4_3:62599044-62599063 | Msa0654410:CDS | 40.0% | |
| TCCAGAAATCGGAGGAAGAA+TGG | - | chr4_3:62595698-62595717 | Msa0654410:three_prime_UTR | 45.0% | |
| CAGAATTCGAAACTGCTCAG+GGG | + | chr4_3:62595737-62595756 | None:intergenic | 45.0% | |
| CTCAGAATTCGAAACTGCTC+AGG | + | chr4_3:62595739-62595758 | None:intergenic | 45.0% | |
| CTGAGCAGTTTCGAATTCTG+AGG | - | chr4_3:62595737-62595756 | Msa0654410:CDS | 45.0% | |
| TTTCCTACATAGAAGCTGGC+TGG | + | chr4_3:62596050-62596069 | None:intergenic | 45.0% | |
| ! | AGAAGGGCATGAAGATGATC+TGG | - | chr4_3:62596112-62596131 | Msa0654410:CDS | 45.0% |
| !!! | GCTCAATTATTTTGGGACGG+AGG | + | chr4_3:62596798-62596817 | None:intergenic | 45.0% |
| AGAGAGAGAGAGAGAGAGAA+TGG | + | chr4_3:62596715-62596734 | None:intergenic | 45.0% | |
| !!! | GCTCAATTATTTTGGGACGG+AGG | - | chr4_3:62596798-62596817 | Msa0654410:intron | 45.0% |
| ATTGTACGCACTTGACGAGA+AGG | - | chr4_3:62596897-62596916 | Msa0654410:CDS | 45.0% | |
| TTGTACGCACTTGACGAGAA+GGG | - | chr4_3:62596898-62596917 | Msa0654410:CDS | 45.0% | |
| CAAACACTATGGCTGACATC+GGG | - | chr4_3:62597084-62597103 | Msa0654410:intron | 45.0% | |
| ! | TCACGCTCTTTGAAAGGTCA+CGG | - | chr4_3:62597532-62597551 | Msa0654410:intron | 45.0% |
| GAGGAGATTAAATTGGGCAG+AGG | - | chr4_3:62597697-62597716 | Msa0654410:intron | 45.0% | |
| ! | CAGAGGAGCAGCAATGTTTT+AGG | - | chr4_3:62597714-62597733 | Msa0654410:intron | 45.0% |
| ! | TTATCAAGGTACCCTGGAAC+AGG | - | chr4_3:62598468-62598487 | Msa0654410:intron | 45.0% |
| AATTCAATTCCGGTTGTGGC+TGG | - | chr4_3:62598568-62598587 | Msa0654410:intron | 45.0% | |
| TTATGTGTTTCACCACCAGC+CGG | - | chr4_3:62598729-62598748 | Msa0654410:intron | 45.0% | |
| !! | ATAACATGTGCTGCTTGTGG+GGG | - | chr4_3:62598775-62598794 | Msa0654410:intron | 45.0% |
| ! | CAGTACTGAAATTGGGACTG+TGG | - | chr4_3:62598965-62598984 | Msa0654410:CDS | 45.0% |
| TTATTTCCATCCTCTCCTGG+GGG | - | chr4_3:62599045-62599064 | Msa0654410:CDS | 45.0% | |
| !!! | ATATTTGTTTATAATTTTTT+TGG | - | chr4_3:62598120-62598139 | Msa0654410:intron | 5.0% |
| GTGACGTTGAGGGAAGAAAG+AGG | + | chr4_3:62595517-62595536 | None:intergenic | 50.0% | |
| !! | GATGGGTTTGGTGACGTTGA+GGG | + | chr4_3:62595527-62595546 | None:intergenic | 50.0% |
| !! | AGATGGGTTTGGTGACGTTG+AGG | + | chr4_3:62595528-62595547 | None:intergenic | 50.0% |
| GAGATGGTAGGGAGAGAGTT+GGG | + | chr4_3:62595607-62595626 | None:intergenic | 50.0% | |
| GCTGACGAATGGAGATGGTA+GGG | + | chr4_3:62595618-62595637 | None:intergenic | 50.0% | |
| GCCATTCTTCCTCCGATTTC+TGG | + | chr4_3:62595702-62595721 | None:intergenic | 50.0% | |
| GTCTACAGTTGTGCAGGTTG+CGG | - | chr4_3:62598519-62598538 | Msa0654410:intron | 50.0% | |
| TCTACAGTTGTGCAGGTTGC+GGG | - | chr4_3:62598520-62598539 | Msa0654410:intron | 50.0% | |
| TCCAGGAACACCCTCATAGA+AGG | + | chr4_3:62598598-62598617 | None:intergenic | 50.0% | |
| ATCCTCATTCCATCTGGGTC+CGG | + | chr4_3:62598751-62598770 | None:intergenic | 50.0% | |
| ACACAATGGCGTTCGTTCGT+GGG | + | chr4_3:62598841-62598860 | None:intergenic | 50.0% | |
| TGGGACTGTGGCTTATAGAG+TGG | - | chr4_3:62598977-62598996 | Msa0654410:CDS | 50.0% | |
| GTGAACATAATACAGCCCCC+AGG | + | chr4_3:62599063-62599082 | None:intergenic | 50.0% | |
| GGGTGGGGTGAAGGTGAATT+TGG | + | chr4_3:62595587-62595606 | None:intergenic | 55.0% | |
| TGGTAGGGAGAGAGTTGGGT+GGG | + | chr4_3:62595603-62595622 | None:intergenic | 55.0% | |
| ATGGTAGGGAGAGAGTTGGG+TGG | + | chr4_3:62595604-62595623 | None:intergenic | 55.0% | |
| GGAGATGGTAGGGAGAGAGT+TGG | + | chr4_3:62595608-62595627 | None:intergenic | 55.0% | |
| GGCTGACGAATGGAGATGGT+AGG | + | chr4_3:62595619-62595638 | None:intergenic | 55.0% | |
| CTTCGGCTGACGAATGGAGA+TGG | + | chr4_3:62595623-62595642 | None:intergenic | 55.0% | |
| AGGAGTAGGTGCAGCAGACA+TGG | + | chr4_3:62595671-62595690 | None:intergenic | 55.0% | |
| ATGTCTGCTGCACCTACTCC+TGG | - | chr4_3:62595670-62595689 | Msa0654410:three_prime_UTR | 55.0% | |
| !! | TCCTGGCTCGGTCCAGAAAT+CGG | - | chr4_3:62595687-62595706 | Msa0654410:three_prime_UTR | 55.0% |
| GAGCCAGCCAGCTTCTATGT+AGG | - | chr4_3:62596044-62596063 | Msa0654410:CDS | 55.0% | |
| ATCATAGGCATGTGGCAGGG+AGG | - | chr4_3:62597667-62597686 | Msa0654410:intron | 55.0% | |
| GAGGGAGTCTACAGTTGTGC+AGG | - | chr4_3:62598513-62598532 | Msa0654410:intron | 55.0% | |
| GGAACACCCTCATAGAAGGC+TGG | + | chr4_3:62598594-62598613 | None:intergenic | 55.0% | |
| !! | GCCTTCTATGAGGGTGTTCC+TGG | - | chr4_3:62598594-62598613 | Msa0654410:intron | 55.0% |
| ACGTGGCGGTTTATAGCTCC+AGG | + | chr4_3:62598615-62598634 | None:intergenic | 55.0% | |
| GACACAATGGCGTTCGTTCG+TGG | + | chr4_3:62598842-62598861 | None:intergenic | 55.0% | |
| CATAATACAGCCCCCAGGAG+AGG | + | chr4_3:62599058-62599077 | None:intergenic | 55.0% | |
| GAGAGAGTTGGGTGGGGTGA+AGG | + | chr4_3:62595596-62595615 | None:intergenic | 60.0% | |
| GGTAGGGAGAGAGTTGGGTG+GGG | + | chr4_3:62595602-62595621 | None:intergenic | 60.0% | |
| TCCATTCGTCAGCCGAAGCG+TGG | - | chr4_3:62595625-62595644 | Msa0654410:three_prime_UTR | 60.0% | |
| ACCACGCTTCGGCTGACGAA+TGG | + | chr4_3:62595629-62595648 | None:intergenic | 60.0% | |
| ! | CAGCCGAAGCGTGGTTTTCG+CGG | - | chr4_3:62595634-62595653 | Msa0654410:three_prime_UTR | 60.0% |
| CCACCGCGAAAACCACGCTT+CGG | + | chr4_3:62595640-62595659 | None:intergenic | 60.0% | |
| TGCTGCACCTACTCCTGGCT+CGG | - | chr4_3:62595675-62595694 | Msa0654410:three_prime_UTR | 60.0% | |
| TTCTGGACCGAGCCAGGAGT+AGG | + | chr4_3:62595685-62595704 | None:intergenic | 60.0% | |
| ! | TCCGATTTCTGGACCGAGCC+AGG | + | chr4_3:62595691-62595710 | None:intergenic | 60.0% |
| !! | TGGCTCGGTCCAGAAATCGG+AGG | - | chr4_3:62595690-62595709 | Msa0654410:three_prime_UTR | 60.0% |
| CACTATGGCTGACATCGGGC+TGG | - | chr4_3:62597088-62597107 | Msa0654410:intron | 60.0% | |
| !! | ATGGCTGACATCGGGCTGGT+TGG | - | chr4_3:62597092-62597111 | Msa0654410:intron | 60.0% |
| !! | TGGCTGACATCGGGCTGGTT+GGG | - | chr4_3:62597093-62597112 | Msa0654410:intron | 60.0% |
| ! | TGGCTGGCCAGCCTTCTATG+AGG | - | chr4_3:62598584-62598603 | Msa0654410:intron | 60.0% |
| ! | GGCTGGCCAGCCTTCTATGA+GGG | - | chr4_3:62598585-62598604 | Msa0654410:intron | 60.0% |
| TCATTCCATCTGGGTCCGGC+TGG | + | chr4_3:62598747-62598766 | None:intergenic | 60.0% | |
| AGCCGGACCCAGATGGAATG+AGG | - | chr4_3:62598746-62598765 | Msa0654410:intron | 60.0% | |
| GCTGCTTGTGGGGGACATCT+CGG | - | chr4_3:62598784-62598803 | Msa0654410:intron | 60.0% | |
| TGGCGTTCGTTCGTGGGTGT+CGG | + | chr4_3:62598835-62598854 | None:intergenic | 60.0% | |
| ATACAGCCCCCAGGAGAGGA+TGG | + | chr4_3:62599054-62599073 | None:intergenic | 60.0% | |
| ! | CCGAAGCGTGGTTTTCGCGG+TGG | - | chr4_3:62595637-62595656 | Msa0654410:three_prime_UTR | 65.0% |
| GTGGCAGGGAGGAGAAGCAG+AGG | - | chr4_3:62597678-62597697 | Msa0654410:intron | 65.0% | |
| ! | GAAGGCTGGCCAGCCACAAC+CGG | + | chr4_3:62598580-62598599 | None:intergenic | 65.0% |
| TTCCATCTGGGTCCGGCTGG+TGG | + | chr4_3:62598744-62598763 | None:intergenic | 65.0% | |
| CACCACCAGCCGGACCCAGA+TGG | - | chr4_3:62598739-62598758 | Msa0654410:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 62595406 | 62599226 | 62595406 | ID=Msa0654410;Name=Msa0654410 |
| chr4_3 | mRNA | 62595406 | 62599226 | 62595406 | ID=Msa0654410-mRNA-1;Parent=Msa0654410;Name=Msa0654410-mRNA-1;_AED=0.05;_eAED=0.05;_QI=81|0.33|0.75|0.75|1|1|4|326|230 |
| chr4_3 | exon | 62595406 | 62595884 | 62595406 | ID=Msa0654410-mRNA-1:exon:17467;Parent=Msa0654410-mRNA-1 |
| chr4_3 | exon | 62596000 | 62596156 | 62596000 | ID=Msa0654410-mRNA-1:exon:17466;Parent=Msa0654410-mRNA-1 |
| chr4_3 | exon | 62596852 | 62596947 | 62596852 | ID=Msa0654410-mRNA-1:exon:17465;Parent=Msa0654410-mRNA-1 |
| chr4_3 | exon | 62598859 | 62599226 | 62598859 | ID=Msa0654410-mRNA-1:exon:17464;Parent=Msa0654410-mRNA-1 |
| chr4_3 | five_prime_UTR | 62599146 | 62599226 | 62599146 | ID=Msa0654410-mRNA-1:five_prime_utr;Parent=Msa0654410-mRNA-1 |
| chr4_3 | CDS | 62598859 | 62599145 | 62598859 | ID=Msa0654410-mRNA-1:cds;Parent=Msa0654410-mRNA-1 |
| chr4_3 | CDS | 62596852 | 62596947 | 62596852 | ID=Msa0654410-mRNA-1:cds;Parent=Msa0654410-mRNA-1 |
| chr4_3 | CDS | 62596000 | 62596156 | 62596000 | ID=Msa0654410-mRNA-1:cds;Parent=Msa0654410-mRNA-1 |
| chr4_3 | CDS | 62595732 | 62595884 | 62595732 | ID=Msa0654410-mRNA-1:cds;Parent=Msa0654410-mRNA-1 |
| chr4_3 | three_prime_UTR | 62595406 | 62595731 | 62595406 | ID=Msa0654410-mRNA-1:three_prime_utr;Parent=Msa0654410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
