Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012040 | Msa0827780 | 0.810273 | 1.251249e-50 | -8.615850e-47 |
| Msa0014710 | Msa0827780 | 0.813479 | 2.507282e-51 | -8.615850e-47 |
| Msa0017510 | Msa0827780 | 0.815665 | 8.230876e-52 | -8.615850e-47 |
| Msa0020930 | Msa0827780 | 0.811938 | 5.449325e-51 | -8.615850e-47 |
| Msa0021510 | Msa0827780 | 0.814626 | 1.399972e-51 | -8.615850e-47 |
| Msa0037570 | Msa0827780 | -0.803890 | 2.809532e-49 | -8.615850e-47 |
| Msa0040450 | Msa0827780 | 0.830149 | 3.455723e-55 | -8.615850e-47 |
| Msa0075880 | Msa0827780 | 0.801535 | 8.600603e-49 | -8.615850e-47 |
| Msa0079380 | Msa0827780 | 0.803773 | 2.971185e-49 | -8.615850e-47 |
| Msa0081930 | Msa0827780 | 0.824819 | 6.562957e-54 | -8.615850e-47 |
| Msa0084380 | Msa0827780 | 0.816207 | 6.227772e-52 | -8.615850e-47 |
| Msa0091210 | Msa0827780 | -0.821966 | 3.048413e-53 | -8.615850e-47 |
| Msa0091250 | Msa0827780 | -0.805647 | 1.206511e-49 | -8.615850e-47 |
| Msa0100090 | Msa0827780 | 0.806265 | 8.946138e-50 | -8.615850e-47 |
| Msa0101700 | Msa0827780 | 0.800965 | 1.124933e-48 | -8.615850e-47 |
| Msa0113970 | Msa0827780 | 0.800692 | 1.278955e-48 | -8.615850e-47 |
| Msa0114060 | Msa0827780 | 0.825480 | 4.581082e-54 | -8.615850e-47 |
| Msa0116770 | Msa0827780 | 0.822309 | 2.538232e-53 | -8.615850e-47 |
| Msa0604510 | Msa0827780 | 0.809736 | 1.633223e-50 | -8.615850e-47 |
| Msa0610430 | Msa0827780 | 0.817965 | 2.508319e-52 | -8.615850e-47 |
| Msa0616160 | Msa0827780 | 0.801754 | 7.756798e-49 | -8.615850e-47 |
| Msa0620960 | Msa0827780 | 0.825383 | 4.830199e-54 | -8.615850e-47 |
| Msa0625720 | Msa0827780 | 0.806341 | 8.621809e-50 | -8.615850e-47 |
| Msa0638070 | Msa0827780 | 0.808904 | 2.462377e-50 | -8.615850e-47 |
| Msa0641670 | Msa0827780 | 0.804369 | 2.233039e-49 | -8.615850e-47 |
| Msa0656530 | Msa0827780 | 0.811151 | 8.078893e-51 | -8.615850e-47 |
| Msa0657580 | Msa0827780 | 0.800503 | 1.397594e-48 | -8.615850e-47 |
| Msa0657970 | Msa0827780 | 0.818601 | 1.800329e-52 | -8.615850e-47 |
| Msa0661190 | Msa0827780 | -0.827324 | 1.665603e-54 | -8.615850e-47 |
| Msa0661650 | Msa0827780 | 0.812984 | 3.218961e-51 | -8.615850e-47 |
| Msa0663240 | Msa0827780 | 0.821923 | 3.118519e-53 | -8.615850e-47 |
| Msa0663390 | Msa0827780 | 0.803461 | 3.448676e-49 | -8.615850e-47 |
| Msa0676080 | Msa0827780 | 0.805372 | 1.378029e-49 | -8.615850e-47 |
| Msa0688480 | Msa0827780 | 0.825499 | 4.534515e-54 | -8.615850e-47 |
| Msa0693380 | Msa0827780 | 0.820945 | 5.244391e-53 | -8.615850e-47 |
| Msa0716840 | Msa0827780 | 0.817722 | 2.846186e-52 | -8.615850e-47 |
| Msa0731940 | Msa0827780 | 0.811284 | 7.561678e-51 | -8.615850e-47 |
| Msa0735170 | Msa0827780 | 0.814101 | 1.828931e-51 | -8.615850e-47 |
| Msa0743720 | Msa0827780 | 0.808659 | 2.778305e-50 | -8.615850e-47 |
| Msa0744040 | Msa0827780 | 0.803399 | 3.550788e-49 | -8.615850e-47 |
| Msa0745790 | Msa0827780 | 0.820346 | 7.199599e-53 | -8.615850e-47 |
| Msa0760130 | Msa0827780 | 0.803147 | 4.004351e-49 | -8.615850e-47 |
| Msa0766630 | Msa0827780 | 0.809765 | 1.609955e-50 | -8.615850e-47 |
| Msa0769920 | Msa0827780 | 0.825136 | 5.525170e-54 | -8.615850e-47 |
| Msa0773840 | Msa0827780 | 0.818692 | 1.716835e-52 | -8.615850e-47 |
| Msa0777230 | Msa0827780 | 0.807309 | 5.382432e-50 | -8.615850e-47 |
| Msa0787470 | Msa0827780 | 0.801108 | 1.051734e-48 | -8.615850e-47 |
| Msa0790510 | Msa0827780 | 0.802221 | 6.216652e-49 | -8.615850e-47 |
| Msa0802830 | Msa0827780 | 0.800247 | 1.576438e-48 | -8.615850e-47 |
| Msa0804230 | Msa0827780 | 0.812239 | 4.684943e-51 | -8.615850e-47 |
| Msa0808270 | Msa0827780 | 0.806719 | 7.174798e-50 | -8.615850e-47 |
| Msa0810220 | Msa0827780 | 0.806330 | 8.669036e-50 | -8.615850e-47 |
| Msa0813400 | Msa0827780 | 0.801562 | 8.490696e-49 | -8.615850e-47 |
| Msa0824680 | Msa0827780 | 0.804711 | 1.894462e-49 | -8.615850e-47 |
| Msa0827780 | Msa0857640 | 0.812524 | 4.060541e-51 | -8.615850e-47 |
| Msa0827780 | Msa0871270 | 0.830382 | 3.031086e-55 | -8.615850e-47 |
| Msa0827780 | Msa0876200 | 0.817110 | 3.909036e-52 | -8.615850e-47 |
| Msa0827780 | Msa0880140 | 0.812680 | 3.752754e-51 | -8.615850e-47 |
| Msa0827780 | Msa0897330 | 0.804784 | 1.829335e-49 | -8.615850e-47 |
| Msa0827780 | Msa0913480 | -0.822517 | 2.270194e-53 | -8.615850e-47 |
| Msa0827780 | Msa0925290 | 0.815592 | 8.542326e-52 | -8.615850e-47 |
| Msa0827780 | Msa0936300 | 0.807756 | 4.327813e-50 | -8.615850e-47 |
| Msa0827780 | Msa0938220 | 0.835416 | 1.699840e-56 | -8.615850e-47 |
| Msa0827780 | Msa0945970 | 0.809613 | 1.735507e-50 | -8.615850e-47 |
| Msa0827780 | Msa0947660 | 0.807631 | 4.599672e-50 | -8.615850e-47 |
| Msa0827780 | Msa0969520 | 0.802201 | 6.278245e-49 | -8.615850e-47 |
| Msa0827780 | Msa0974070 | 0.816236 | 6.137308e-52 | -8.615850e-47 |
| Msa0827780 | Msa0975340 | 0.813602 | 2.355895e-51 | -8.615850e-47 |
| Msa0827780 | Msa0976670 | 0.805712 | 1.169174e-49 | -8.615850e-47 |
| Msa0827780 | Msa0993290 | 0.801973 | 6.991543e-49 | -8.615850e-47 |
| Msa0827780 | Msa0993600 | 0.806345 | 8.604669e-50 | -8.615850e-47 |
| Msa0827780 | Msa1003620 | 0.817382 | 3.394657e-52 | -8.615850e-47 |
| Msa0827780 | Msa1014540 | 0.839909 | 1.194958e-57 | -8.615850e-47 |
| Msa0827780 | Msa1023400 | 0.802655 | 5.060862e-49 | -8.615850e-47 |
| Msa0827780 | Msa1028970 | 0.802039 | 6.778932e-49 | -8.615850e-47 |
| Msa0827780 | Msa1046460 | 0.800371 | 1.487504e-48 | -8.615850e-47 |
| Msa0827780 | Msa1061680 | 0.811244 | 7.713182e-51 | -8.615850e-47 |
| Msa0827780 | Msa1075220 | -0.804072 | 2.574109e-49 | -8.615850e-47 |
| Msa0827780 | Msa1075540 | 0.802457 | 5.560589e-49 | -8.615850e-47 |
| Msa0827780 | Msa1075650 | 0.819345 | 1.219579e-52 | -8.615850e-47 |
| Msa0827780 | Msa1082500 | 0.844309 | 8.189143e-59 | -8.615850e-47 |
| Msa0827780 | Msa1104090 | 0.806196 | 9.248752e-50 | -8.615850e-47 |
| Msa0827780 | Msa1113170 | 0.801485 | 8.806967e-49 | -8.615850e-47 |
| Msa0827780 | Msa1116130 | -0.801625 | 8.245012e-49 | -8.615850e-47 |
| Msa0827780 | Msa1131220 | 0.811278 | 7.584084e-51 | -8.615850e-47 |
| Msa0827780 | Msa1154280 | 0.829380 | 5.315818e-55 | -8.615850e-47 |
| Msa0827780 | Msa1162550 | -0.800457 | 1.428716e-48 | -8.615850e-47 |
| Msa0827780 | Msa1172400 | 0.806906 | 6.550404e-50 | -8.615850e-47 |
| Msa0827780 | Msa1174040 | 0.803003 | 4.290039e-49 | -8.615850e-47 |
| Msa0827780 | Msa1186950 | -0.815026 | 1.141258e-51 | -8.615850e-47 |
| Msa0827780 | Msa1199220 | 0.806695 | 7.258371e-50 | -8.615850e-47 |
| Msa0827780 | Msa1204530 | 0.800280 | 1.551884e-48 | -8.615850e-47 |
| Msa0827780 | Msa1222970 | 0.800320 | 1.523106e-48 | -8.615850e-47 |
| Msa0827780 | Msa1228590 | 0.800418 | 1.454565e-48 | -8.615850e-47 |
| Msa0827780 | Msa1233500 | 0.800697 | 1.276158e-48 | -8.615850e-47 |
| Msa0827780 | Msa1233890 | 0.853518 | 2.266606e-61 | -8.615850e-47 |
| Msa0827780 | Msa1238930 | 0.829535 | 4.875918e-55 | -8.615850e-47 |
| Msa0827780 | Msa1244250 | 0.816167 | 6.358839e-52 | -8.615850e-47 |
| Msa0827780 | Msa1249490 | 0.832116 | 1.136015e-55 | -8.615850e-47 |
| Msa0827780 | Msa1253020 | 0.802651 | 5.070412e-49 | -8.615850e-47 |
| Msa0827780 | Msa1264020 | 0.806395 | 8.397922e-50 | -8.615850e-47 |
| Msa0827780 | Msa1277660 | 0.807935 | 3.964752e-50 | -8.615850e-47 |
| Msa0827780 | Msa1282580 | -0.824700 | 7.003761e-54 | -8.615850e-47 |
| Msa0827780 | Msa1284680 | 0.821664 | 3.580880e-53 | -8.615850e-47 |
| Msa0827780 | Msa1287460 | 0.803704 | 3.070569e-49 | -8.615850e-47 |
| Msa0827780 | Msa1291660 | 0.812840 | 3.462222e-51 | -8.615850e-47 |
| Msa0827780 | Msa1296760 | 0.825979 | 3.487481e-54 | -8.615850e-47 |
| Msa0827780 | Msa1305190 | 0.802149 | 6.434332e-49 | -8.615850e-47 |
| Msa0827780 | Msa1305340 | 0.809536 | 1.802750e-50 | -8.615850e-47 |
| Msa0827780 | Msa1306840 | 0.816830 | 4.517663e-52 | -8.615850e-47 |
| Msa0827780 | Msa1308380 | 0.804327 | 2.278092e-49 | -8.615850e-47 |
| Msa0827780 | Msa1324780 | 0.801353 | 9.373086e-49 | -8.615850e-47 |
| Msa0827780 | Msa1329700 | 0.808232 | 3.426473e-50 | -8.615850e-47 |
| Msa0827780 | Msa1336490 | 0.801511 | 8.697541e-49 | -8.615850e-47 |
| Msa0827780 | Msa1359040 | 0.823091 | 1.669547e-53 | -8.615850e-47 |
| Msa0827780 | Msa1367080 | 0.805707 | 1.172271e-49 | -8.615850e-47 |
| Msa0827780 | Msa1371430 | 0.804850 | 1.771937e-49 | -8.615850e-47 |
| Msa0827780 | Msa1372760 | 0.811482 | 6.850177e-51 | -8.615850e-47 |
| Msa0827780 | Msa1373030 | 0.804363 | 2.239311e-49 | -8.615850e-47 |
| Msa0827780 | Msa1390050 | 0.818858 | 1.573912e-52 | -8.615850e-47 |
| Msa0827780 | Msa1397860 | 0.800871 | 1.175732e-48 | -8.615850e-47 |
| Msa0827780 | Msa1400190 | 0.808325 | 3.274086e-50 | -8.615850e-47 |
| Msa0827780 | Msa1403480 | 0.800687 | 1.282508e-48 | -8.615850e-47 |
| Msa0827780 | Msa1410100 | 0.813082 | 3.064975e-51 | -8.615850e-47 |
| Msa0827780 | Msa1411020 | 0.816426 | 5.563864e-52 | -8.615850e-47 |
| Msa0827780 | Msa1412640 | 0.809346 | 1.979881e-50 | -8.615850e-47 |
| Msa0827780 | Msa1419960 | 0.804451 | 2.146968e-49 | -8.615850e-47 |
| Msa0827780 | Msa1420490 | 0.808061 | 3.726763e-50 | -8.615850e-47 |
| Msa0827780 | Msa1423390 | 0.808523 | 2.969791e-50 | -8.615850e-47 |
| Msa0827780 | Msa1424290 | 0.812773 | 3.581516e-51 | -8.615850e-47 |
| Msa0827780 | Msa1424750 | 0.812076 | 5.084173e-51 | -8.615850e-47 |
| Msa0827780 | Msa1426030 | 0.824189 | 9.234352e-54 | -8.615850e-47 |
| Msa0827780 | Msa1427230 | 0.820097 | 8.213481e-53 | -8.615850e-47 |
| Msa0827780 | Msa1429150 | 0.803734 | 3.025762e-49 | -8.615850e-47 |
| Msa0827780 | Msa1430680 | 0.813756 | 2.178673e-51 | -8.615850e-47 |
| Msa0827780 | Msa1434350 | 0.812965 | 3.251150e-51 | -8.615850e-47 |
| Msa0827780 | Msa1439320 | 0.816825 | 4.528007e-52 | -8.615850e-47 |
| Msa0827780 | Msa1440370 | 0.817687 | 2.897569e-52 | -8.615850e-47 |
| Msa0827780 | Msa1440810 | 0.813213 | 2.868292e-51 | -8.615850e-47 |
| Msa0827780 | Msa1451620 | -0.804107 | 2.532238e-49 | -8.615850e-47 |
| Msa0827780 | Msa1452240 | 0.802315 | 5.947780e-49 | -8.615850e-47 |
| Msa0827780 | Msa1455490 | 0.803129 | 4.039585e-49 | -8.615850e-47 |
| Msa0827780 | Msa1460830 | 0.818179 | 2.243153e-52 | -8.615850e-47 |
| Msa0827780 | Msa1466540 | 0.809715 | 1.649867e-50 | -8.615850e-47 |
| Msa0128020 | Msa0827780 | 0.816642 | 4.977781e-52 | -8.615850e-47 |
| Msa0135380 | Msa0827780 | 0.807127 | 5.882431e-50 | -8.615850e-47 |
| Msa0136070 | Msa0827780 | 0.826475 | 2.657782e-54 | -8.615850e-47 |
| Msa0136100 | Msa0827780 | 0.810626 | 1.050006e-50 | -8.615850e-47 |
| Msa0150840 | Msa0827780 | 0.800303 | 1.535050e-48 | -8.615850e-47 |
| Msa0157290 | Msa0827780 | 0.814612 | 1.410018e-51 | -8.615850e-47 |
| Msa0159930 | Msa0827780 | 0.802268 | 6.082246e-49 | -8.615850e-47 |
| Msa0165210 | Msa0827780 | 0.821018 | 5.045923e-53 | -8.615850e-47 |
| Msa0165220 | Msa0827780 | 0.818608 | 1.793296e-52 | -8.615850e-47 |
| Msa0173990 | Msa0827780 | 0.822689 | 2.070678e-53 | -8.615850e-47 |
| Msa0180500 | Msa0827780 | 0.813541 | 2.429526e-51 | -8.615850e-47 |
| Msa0197660 | Msa0827780 | 0.828405 | 9.153937e-55 | -8.615850e-47 |
| Msa0200260 | Msa0827780 | 0.810746 | 9.889812e-51 | -8.615850e-47 |
| Msa0212310 | Msa0827780 | 0.800277 | 1.553952e-48 | -8.615850e-47 |
| Msa0220580 | Msa0827780 | 0.820528 | 6.539172e-53 | -8.615850e-47 |
| Msa0222890 | Msa0827780 | 0.810639 | 1.043176e-50 | -8.615850e-47 |
| Msa0223410 | Msa0827780 | -0.816064 | 6.705100e-52 | -8.615850e-47 |
| Msa0226890 | Msa0827780 | 0.804771 | 1.841101e-49 | -8.615850e-47 |
| Msa0383800 | Msa0827780 | 0.810898 | 9.165362e-51 | -8.615850e-47 |
| Msa0390400 | Msa0827780 | -0.800826 | 1.201109e-48 | -8.615850e-47 |
| Msa0397750 | Msa0827780 | 0.808967 | 2.387274e-50 | -8.615850e-47 |
| Msa0398380 | Msa0827780 | 0.807999 | 3.842121e-50 | -8.615850e-47 |
| Msa0398710 | Msa0827780 | 0.801526 | 8.636674e-49 | -8.615850e-47 |
| Msa0404030 | Msa0827780 | 0.804369 | 2.232385e-49 | -8.615850e-47 |
| Msa0416300 | Msa0827780 | 0.802274 | 6.063884e-49 | -8.615850e-47 |
| Msa0432300 | Msa0827780 | 0.812239 | 4.684653e-51 | -8.615850e-47 |
| Msa0432770 | Msa0827780 | 0.800632 | 1.315790e-48 | -8.615850e-47 |
| Msa0434180 | Msa0827780 | 0.800869 | 1.177311e-48 | -8.615850e-47 |
| Msa0440750 | Msa0827780 | 0.815854 | 7.466686e-52 | -8.615850e-47 |
| Msa0466390 | Msa0827780 | 0.802117 | 6.530627e-49 | -8.615850e-47 |
| Msa0479660 | Msa0827780 | 0.820608 | 6.269936e-53 | -8.615850e-47 |
| Msa0480980 | Msa0827780 | 0.810821 | 9.527143e-51 | -8.615850e-47 |
| Msa0481530 | Msa0827780 | 0.802822 | 4.675571e-49 | -8.615850e-47 |
| Msa0239800 | Msa0827780 | 0.823721 | 1.189468e-53 | -8.615850e-47 |
| Msa0241640 | Msa0827780 | 0.814382 | 1.584805e-51 | -8.615850e-47 |
| Msa0260680 | Msa0827780 | 0.812712 | 3.692923e-51 | -8.615850e-47 |
| Msa0265380 | Msa0827780 | 0.807053 | 6.098822e-50 | -8.615850e-47 |
| Msa0277820 | Msa0827780 | 0.803397 | 3.555331e-49 | -8.615850e-47 |
| Msa0279790 | Msa0827780 | 0.823928 | 1.063531e-53 | -8.615850e-47 |
| Msa0280090 | Msa0827780 | 0.824986 | 5.995217e-54 | -8.615850e-47 |
| Msa0283520 | Msa0827780 | 0.805707 | 1.172414e-49 | -8.615850e-47 |
| Msa0287650 | Msa0827780 | 0.807261 | 5.509704e-50 | -8.615850e-47 |
| Msa0288100 | Msa0827780 | 0.802519 | 5.397504e-49 | -8.615850e-47 |
| Msa0289250 | Msa0827780 | 0.803130 | 4.037831e-49 | -8.615850e-47 |
| Msa0309770 | Msa0827780 | 0.828226 | 1.011155e-54 | -8.615850e-47 |
| Msa0317510 | Msa0827780 | 0.823583 | 1.281083e-53 | -8.615850e-47 |
| Msa0318980 | Msa0827780 | 0.804722 | 1.884265e-49 | -8.615850e-47 |
| Msa0321860 | Msa0827780 | 0.809076 | 2.262297e-50 | -8.615850e-47 |
| Msa0332000 | Msa0827780 | 0.810837 | 9.451323e-51 | -8.615850e-47 |
| Msa0333030 | Msa0827780 | 0.804461 | 2.136903e-49 | -8.615850e-47 |
| Msa0333720 | Msa0827780 | -0.811296 | 7.515510e-51 | -8.615850e-47 |
| Msa0339250 | Msa0827780 | 0.816439 | 5.526936e-52 | -8.615850e-47 |
| Msa0340450 | Msa0827780 | 0.809503 | 1.832374e-50 | -8.615850e-47 |
| Msa0345970 | Msa0827780 | 0.829440 | 5.141222e-55 | -8.615850e-47 |
| Msa0350990 | Msa0827780 | 0.819506 | 1.120695e-52 | -8.615850e-47 |
| Msa0351030 | Msa0827780 | 0.821081 | 4.880458e-53 | -8.615850e-47 |
| Msa0355220 | Msa0827780 | 0.804206 | 2.414513e-49 | -8.615850e-47 |
| Msa0483850 | Msa0827780 | 0.802210 | 6.251153e-49 | -8.615850e-47 |
| Msa0484780 | Msa0827780 | 0.831460 | 1.648162e-55 | -8.615850e-47 |
| Msa0500360 | Msa0827780 | 0.826250 | 3.007727e-54 | -8.615850e-47 |
| Msa0502890 | Msa0827780 | 0.804697 | 1.907699e-49 | -8.615850e-47 |
| Msa0529890 | Msa0827780 | 0.806015 | 1.009927e-49 | -8.615850e-47 |
| Msa0532350 | Msa0827780 | 0.803397 | 3.554379e-49 | -8.615850e-47 |
| Msa0558690 | Msa0827780 | 0.805745 | 1.150907e-49 | -8.615850e-47 |
| Msa0562440 | Msa0827780 | 0.811412 | 7.092119e-51 | -8.615850e-47 |
| Msa0563840 | Msa0827780 | 0.806295 | 8.816679e-50 | -8.615850e-47 |
| Msa0577500 | Msa0827780 | 0.814608 | 1.413158e-51 | -8.615850e-47 |
| Msa0581760 | Msa0827780 | 0.807029 | 6.169709e-50 | -8.615850e-47 |
| Msa0585230 | Msa0827780 | 0.814348 | 1.612920e-51 | -8.615850e-47 |
| Msa0585560 | Msa0827780 | 0.801331 | 9.468773e-49 | -8.615850e-47 |
| Msa0593650 | Msa0827780 | 0.844098 | 9.329200e-59 | -8.615850e-47 |
| Msa0602390 | Msa0827780 | 0.809605 | 1.742348e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 18 sgRNAs with CRISPR-Local
Find 25 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAATTGCTCACATTATA+CGG | 0.326347 | 5_3:+69262200 | Msa0827780:five_prime_UTR |
| TGATTTCTTTGACTCATTCA+TGG | 0.333269 | 5_3:+69262279 | Msa0827780:exon |
| CCGTCATGGAAGCAATTATC+AGG | 0.356730 | 5_3:+69262244 | Msa0827780:five_prime_UTR |
| GTAGATTGAGTCAAAGTTGA+AGG | 0.423072 | 5_3:+69262506 | Msa0827780:intron |
| ACTTGTCATGATGCATGTTA+TGG | 0.428964 | 5_3:-69262604 | None:intergenic |
| TACAAGGCTTAAGCAACAAT+TGG | 0.471347 | 5_3:+69262536 | Msa0827780:CDS |
| TACATGGCAACCAGAGCATA+AGG | 0.485592 | 5_3:+69262410 | Msa0827780:CDS |
| GTGCAAGTAGTTAGTTGTGT+TGG | 0.547526 | 5_3:+69262099 | None:intergenic |
| CAAGTAAAGTCTTAACTCAA+AGG | 0.556719 | 5_3:-69262132 | None:intergenic |
| CCTGATAATTGCTTCCATGA+CGG | 0.572248 | 5_3:-69262244 | None:intergenic |
| TAGAAGAGGGAAAACCGTCA+TGG | 0.601838 | 5_3:+69262230 | Msa0827780:five_prime_UTR |
| TTTCTTTAACTACCAATGTG+TGG | 0.607987 | 5_3:-69262183 | None:intergenic |
| AGTTGAAGGAGGCAACTACA+AGG | 0.610652 | 5_3:+69262520 | Msa0827780:CDS |
| TATACGGTCTCAATTAGAAG+AGG | 0.616182 | 5_3:+69262216 | Msa0827780:five_prime_UTR |
| CAGGTTTGATCACCACACAT+TGG | 0.634316 | 5_3:+69262171 | Msa0827780:five_prime_UTR |
| GATTGAGTCAAAGTTGAAGG+AGG | 0.637853 | 5_3:+69262509 | Msa0827780:intron |
| ATACGGTCTCAATTAGAAGA+GGG | 0.649151 | 5_3:+69262217 | Msa0827780:five_prime_UTR |
| ATGAGTCAAAGAAATCATCT+CGG | 0.652827 | 5_3:-69262273 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTACAGAAAAAGTTTACA+TGG | + | chr5_3:69262394-69262413 | Msa0827780:intron | 20.0% |
| !!! | CGAAAAAAACTTTGAAATAA+GGG | + | chr5_3:69262441-69262460 | Msa0827780:intron | 20.0% |
| !!! | GAAAAAAACTTTGAAATAAG+GGG | + | chr5_3:69262442-69262461 | Msa0827780:intron | 20.0% |
| !!! | TTGTTTGAAACACATTTTTC+AGG | + | chr5_3:69262152-69262171 | Msa0827780:five_prime_UTR | 25.0% |
| ! | AAGAAATTGCTCACATTATA+CGG | + | chr5_3:69262200-69262219 | Msa0827780:five_prime_UTR | 25.0% |
| !!! | TACTTAAATCTGTTCTAAAG+AGG | - | chr5_3:69262343-69262362 | None:intergenic | 25.0% |
| !!! | GCGAAAAAAACTTTGAAATA+AGG | + | chr5_3:69262440-69262459 | Msa0827780:intron | 25.0% |
| CAAGTAAAGTCTTAACTCAA+AGG | - | chr5_3:69262135-69262154 | None:intergenic | 30.0% | |
| TTTCTTTAACTACCAATGTG+TGG | - | chr5_3:69262186-69262205 | None:intergenic | 30.0% | |
| ATGAGTCAAAGAAATCATCT+CGG | - | chr5_3:69262276-69262295 | None:intergenic | 30.0% | |
| TGATTTCTTTGACTCATTCA+TGG | + | chr5_3:69262279-69262298 | Msa0827780:exon | 30.0% | |
| TATACGGTCTCAATTAGAAG+AGG | + | chr5_3:69262216-69262235 | Msa0827780:five_prime_UTR | 35.0% | |
| ATACGGTCTCAATTAGAAGA+GGG | + | chr5_3:69262217-69262236 | Msa0827780:five_prime_UTR | 35.0% | |
| GTAGATTGAGTCAAAGTTGA+AGG | + | chr5_3:69262506-69262525 | Msa0827780:intron | 35.0% | |
| TACAAGGCTTAAGCAACAAT+TGG | + | chr5_3:69262536-69262555 | Msa0827780:CDS | 35.0% | |
| ACTTGTCATGATGCATGTTA+TGG | - | chr5_3:69262607-69262626 | None:intergenic | 35.0% | |
| CCTGATAATTGCTTCCATGA+CGG | - | chr5_3:69262247-69262266 | None:intergenic | 40.0% | |
| ! | CTCAGTTGATGCAAGAAGTT+CGG | + | chr5_3:69262479-69262498 | Msa0827780:intron | 40.0% |
| GATTGAGTCAAAGTTGAAGG+AGG | + | chr5_3:69262509-69262528 | Msa0827780:intron | 40.0% | |
| CAGGTTTGATCACCACACAT+TGG | + | chr5_3:69262171-69262190 | Msa0827780:five_prime_UTR | 45.0% | |
| TAGAAGAGGGAAAACCGTCA+TGG | + | chr5_3:69262230-69262249 | Msa0827780:five_prime_UTR | 45.0% | |
| CCGTCATGGAAGCAATTATC+AGG | + | chr5_3:69262244-69262263 | Msa0827780:five_prime_UTR | 45.0% | |
| TACATGGCAACCAGAGCATA+AGG | + | chr5_3:69262410-69262429 | Msa0827780:CDS | 45.0% | |
| ! | CGCACTTTTACCTTATGCTC+TGG | - | chr5_3:69262423-69262442 | None:intergenic | 45.0% |
| AGTTGAAGGAGGCAACTACA+AGG | + | chr5_3:69262520-69262539 | Msa0827780:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 69262100 | 69262723 | 69262100 | ID=Msa0827780;Name=Msa0827780 |
| chr5_3 | mRNA | 69262100 | 69262723 | 69262100 | ID=Msa0827780-mRNA-1;Parent=Msa0827780;Name=Msa0827780-mRNA-1;_AED=0.19;_eAED=0.19;_QI=198|0.33|0.25|1|0|0|4|0|62 |
| chr5_3 | exon | 69262100 | 69262300 | 69262100 | ID=Msa0827780-mRNA-1:exon:21782;Parent=Msa0827780-mRNA-1 |
| chr5_3 | exon | 69262402 | 69262431 | 69262402 | ID=Msa0827780-mRNA-1:exon:21783;Parent=Msa0827780-mRNA-1 |
| chr5_3 | exon | 69262510 | 69262629 | 69262510 | ID=Msa0827780-mRNA-1:exon:21784;Parent=Msa0827780-mRNA-1 |
| chr5_3 | exon | 69262691 | 69262723 | 69262691 | ID=Msa0827780-mRNA-1:exon:21785;Parent=Msa0827780-mRNA-1 |
| chr5_3 | five_prime_UTR | 69262100 | 69262297 | 69262100 | ID=Msa0827780-mRNA-1:five_prime_utr;Parent=Msa0827780-mRNA-1 |
| chr5_3 | CDS | 69262298 | 69262300 | 69262298 | ID=Msa0827780-mRNA-1:cds;Parent=Msa0827780-mRNA-1 |
| chr5_3 | CDS | 69262402 | 69262431 | 69262402 | ID=Msa0827780-mRNA-1:cds;Parent=Msa0827780-mRNA-1 |
| chr5_3 | CDS | 69262510 | 69262629 | 69262510 | ID=Msa0827780-mRNA-1:cds;Parent=Msa0827780-mRNA-1 |
| chr5_3 | CDS | 69262691 | 69262723 | 69262691 | ID=Msa0827780-mRNA-1:cds;Parent=Msa0827780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
