Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063830 | XP_013455381.1 | 78.896 | 308 | 30 | 3 | 1 | 307 | 1 | 274 | 6.07e-152 | 436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063830 | A0A072UIE0 | 78.896 | 308 | 30 | 3 | 1 | 307 | 1 | 274 | 2.90e-152 | 436 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001420 | Msa0063830 | 0.813802 | 2.128603e-51 | -8.615850e-47 |
| Msa0001540 | Msa0063830 | 0.816551 | 5.216253e-52 | -8.615850e-47 |
| Msa0009800 | Msa0063830 | 0.839769 | 1.299388e-57 | -8.615850e-47 |
| Msa0009890 | Msa0063830 | 0.823269 | 1.516548e-53 | -8.615850e-47 |
| Msa0017980 | Msa0063830 | 0.852660 | 3.990418e-61 | -8.615850e-47 |
| Msa0018870 | Msa0063830 | 0.827575 | 1.450162e-54 | -8.615850e-47 |
| Msa0021240 | Msa0063830 | 0.830140 | 3.473526e-55 | -8.615850e-47 |
| Msa0025340 | Msa0063830 | 0.808361 | 3.216251e-50 | -8.615850e-47 |
| Msa0029280 | Msa0063830 | 0.817517 | 3.164725e-52 | -8.615850e-47 |
| Msa0032450 | Msa0063830 | 0.826141 | 3.192776e-54 | -8.615850e-47 |
| Msa0032990 | Msa0063830 | 0.827010 | 1.981109e-54 | -8.615850e-47 |
| Msa0034100 | Msa0063830 | 0.825914 | 3.614489e-54 | -8.615850e-47 |
| Msa0039270 | Msa0063830 | -0.802581 | 5.240990e-49 | -8.615850e-47 |
| Msa0042240 | Msa0063830 | 0.838826 | 2.283042e-57 | -8.615850e-47 |
| Msa0045660 | Msa0063830 | 0.827238 | 1.747224e-54 | -8.615850e-47 |
| Msa0046090 | Msa0063830 | 0.808318 | 3.285838e-50 | -8.615850e-47 |
| Msa0046360 | Msa0063830 | 0.820594 | 6.315723e-53 | -8.615850e-47 |
| Msa0046700 | Msa0063830 | 0.819568 | 1.084927e-52 | -8.615850e-47 |
| Msa0049990 | Msa0063830 | 0.809370 | 1.956958e-50 | -8.615850e-47 |
| Msa0054760 | Msa0063830 | 0.808594 | 2.868434e-50 | -8.615850e-47 |
| Msa0055530 | Msa0063830 | 0.820814 | 5.622496e-53 | -8.615850e-47 |
| Msa0059590 | Msa0063830 | 0.812648 | 3.813775e-51 | -8.615850e-47 |
| Msa0063830 | Msa0065400 | 0.830912 | 2.248371e-55 | -8.615850e-47 |
| Msa0063830 | Msa0073350 | 0.804269 | 2.342341e-49 | -8.615850e-47 |
| Msa0063830 | Msa0074220 | 0.844893 | 5.701757e-59 | -8.615850e-47 |
| Msa0063830 | Msa0075860 | 0.816573 | 5.158963e-52 | -8.615850e-47 |
| Msa0063830 | Msa0076100 | 0.811657 | 6.274123e-51 | -8.615850e-47 |
| Msa0063830 | Msa0081290 | 0.802528 | 5.374279e-49 | -8.615850e-47 |
| Msa0063830 | Msa0081300 | 0.803749 | 3.004944e-49 | -8.615850e-47 |
| Msa0063830 | Msa0081790 | 0.822720 | 2.036734e-53 | -8.615850e-47 |
| Msa0063830 | Msa0088670 | 0.810427 | 1.159237e-50 | -8.615850e-47 |
| Msa0063830 | Msa0094670 | 0.807472 | 4.970423e-50 | -8.615850e-47 |
| Msa0063830 | Msa0094990 | 0.800971 | 1.122085e-48 | -8.615850e-47 |
| Msa0063830 | Msa0097730 | 0.856228 | 3.707551e-62 | -8.615850e-47 |
| Msa0063830 | Msa0097970 | 0.835839 | 1.328596e-56 | -8.615850e-47 |
| Msa0063830 | Msa0104190 | 0.812605 | 3.896923e-51 | -8.615850e-47 |
| Msa0063830 | Msa0107460 | 0.816798 | 4.592495e-52 | -8.615850e-47 |
| Msa0063830 | Msa0113910 | 0.834621 | 2.696593e-56 | -8.615850e-47 |
| Msa0063830 | Msa0115950 | 0.838448 | 2.858330e-57 | -8.615850e-47 |
| Msa0063830 | Msa0116200 | 0.818134 | 2.296232e-52 | -8.615850e-47 |
| Msa0063830 | Msa0116950 | 0.826811 | 2.210396e-54 | -8.615850e-47 |
| Msa0063830 | Msa0121080 | 0.812794 | 3.543492e-51 | -8.615850e-47 |
| Msa0063830 | Msa0122170 | 0.816617 | 5.042962e-52 | -8.615850e-47 |
| Msa0063830 | Msa0127060 | 0.815026 | 1.141345e-51 | -8.615850e-47 |
| Msa0063830 | Msa0127110 | 0.811064 | 8.440778e-51 | -8.615850e-47 |
| Msa0063830 | Msa0128110 | 0.829054 | 6.379699e-55 | -8.615850e-47 |
| Msa0063830 | Msa0129270 | -0.806957 | 6.391829e-50 | -8.615850e-47 |
| Msa0063830 | Msa0131390 | 0.853794 | 1.887600e-61 | -8.615850e-47 |
| Msa0063830 | Msa0133390 | 0.814707 | 1.342964e-51 | -8.615850e-47 |
| Msa0063830 | Msa0140870 | 0.804667 | 1.935143e-49 | -8.615850e-47 |
| Msa0063830 | Msa0142000 | 0.819103 | 1.384517e-52 | -8.615850e-47 |
| Msa0063830 | Msa0147990 | 0.808702 | 2.719608e-50 | -8.615850e-47 |
| Msa0063830 | Msa0149630 | 0.833259 | 5.909236e-56 | -8.615850e-47 |
| Msa0063830 | Msa0160080 | 0.832470 | 9.284223e-56 | -8.615850e-47 |
| Msa0063830 | Msa0160470 | 0.823946 | 1.053496e-53 | -8.615850e-47 |
| Msa0063830 | Msa0163300 | 0.806559 | 7.757254e-50 | -8.615850e-47 |
| Msa0063830 | Msa0168950 | 0.803047 | 4.200137e-49 | -8.615850e-47 |
| Msa0063830 | Msa0168960 | 0.807142 | 5.840418e-50 | -8.615850e-47 |
| Msa0063830 | Msa0169320 | 0.816439 | 5.526603e-52 | -8.615850e-47 |
| Msa0063830 | Msa0173610 | 0.800161 | 1.641231e-48 | -8.615850e-47 |
| Msa0063830 | Msa0173760 | 0.800385 | 1.477555e-48 | -8.615850e-47 |
| Msa0063830 | Msa0177490 | 0.854318 | 1.332990e-61 | -8.615850e-47 |
| Msa0063830 | Msa0181020 | 0.806345 | 8.606524e-50 | -8.615850e-47 |
| Msa0063830 | Msa0181560 | 0.801147 | 1.032835e-48 | -8.615850e-47 |
| Msa0063830 | Msa0184800 | 0.811729 | 6.052537e-51 | -8.615850e-47 |
| Msa0063830 | Msa0184900 | 0.801084 | 1.063920e-48 | -8.615850e-47 |
| Msa0063830 | Msa0186380 | 0.805618 | 1.223768e-49 | -8.615850e-47 |
| Msa0063830 | Msa0190400 | 0.814821 | 1.267651e-51 | -8.615850e-47 |
| Msa0063830 | Msa0192020 | 0.809618 | 1.731302e-50 | -8.615850e-47 |
| Msa0063830 | Msa0192710 | 0.821897 | 3.162198e-53 | -8.615850e-47 |
| Msa0063830 | Msa0193000 | 0.829550 | 4.834482e-55 | -8.615850e-47 |
| Msa0063830 | Msa0199490 | 0.802479 | 5.502028e-49 | -8.615850e-47 |
| Msa0063830 | Msa0203330 | 0.831730 | 1.414819e-55 | -8.615850e-47 |
| Msa0063830 | Msa0208710 | 0.816671 | 4.903971e-52 | -8.615850e-47 |
| Msa0063830 | Msa0209590 | 0.801306 | 9.582796e-49 | -8.615850e-47 |
| Msa0063830 | Msa0217300 | 0.807724 | 4.395680e-50 | -8.615850e-47 |
| Msa0063830 | Msa0218860 | 0.814752 | 1.312663e-51 | -8.615850e-47 |
| Msa0063830 | Msa0222720 | 0.804999 | 1.649673e-49 | -8.615850e-47 |
| Msa0063830 | Msa0224400 | 0.807564 | 4.753293e-50 | -8.615850e-47 |
| Msa0063830 | Msa0224980 | 0.807119 | 5.906623e-50 | -8.615850e-47 |
| Msa0063830 | Msa0225030 | 0.807910 | 4.013524e-50 | -8.615850e-47 |
| Msa0063830 | Msa0244320 | 0.807902 | 4.027494e-50 | -8.615850e-47 |
| Msa0063830 | Msa0246470 | 0.801751 | 7.767422e-49 | -8.615850e-47 |
| Msa0063830 | Msa0258410 | 0.800792 | 1.220680e-48 | -8.615850e-47 |
| Msa0063830 | Msa0264020 | 0.801386 | 9.226006e-49 | -8.615850e-47 |
| Msa0063830 | Msa0267130 | 0.825091 | 5.662762e-54 | -8.615850e-47 |
| Msa0063830 | Msa0269430 | 0.811918 | 5.505693e-51 | -8.615850e-47 |
| Msa0063830 | Msa0270230 | 0.802648 | 5.077444e-49 | -8.615850e-47 |
| Msa0063830 | Msa0273550 | 0.813798 | 2.133091e-51 | -8.615850e-47 |
| Msa0063830 | Msa0290600 | 0.831409 | 1.696895e-55 | -8.615850e-47 |
| Msa0063830 | Msa0297860 | 0.815126 | 1.084623e-51 | -8.615850e-47 |
| Msa0063830 | Msa0308430 | 0.821239 | 4.487824e-53 | -8.615850e-47 |
| Msa0063830 | Msa0309490 | 0.811381 | 7.201647e-51 | -8.615850e-47 |
| Msa0063830 | Msa0313550 | 0.800352 | 1.500416e-48 | -8.615850e-47 |
| Msa0063830 | Msa0321230 | 0.800201 | 1.610263e-48 | -8.615850e-47 |
| Msa0063830 | Msa0335740 | 0.805172 | 1.517568e-49 | -8.615850e-47 |
| Msa0063830 | Msa0350300 | 0.808886 | 2.484224e-50 | -8.615850e-47 |
| Msa0063830 | Msa0353900 | 0.805307 | 1.422261e-49 | -8.615850e-47 |
| Msa0063830 | Msa0355590 | 0.812035 | 5.190162e-51 | -8.615850e-47 |
| Msa0063830 | Msa0358720 | 0.806097 | 9.704743e-50 | -8.615850e-47 |
| Msa0063830 | Msa0362840 | 0.808002 | 3.835653e-50 | -8.615850e-47 |
| Msa0063830 | Msa0376760 | 0.811671 | 6.230516e-51 | -8.615850e-47 |
| Msa0063830 | Msa0378530 | 0.809025 | 2.320285e-50 | -8.615850e-47 |
| Msa0063830 | Msa0380360 | 0.810226 | 1.280497e-50 | -8.615850e-47 |
| Msa0063830 | Msa0380440 | 0.820099 | 8.201973e-53 | -8.615850e-47 |
| Msa0063830 | Msa0384150 | 0.814079 | 1.849191e-51 | -8.615850e-47 |
| Msa0063830 | Msa0384570 | 0.812683 | 3.746619e-51 | -8.615850e-47 |
| Msa0063830 | Msa0385870 | 0.821424 | 4.067447e-53 | -8.615850e-47 |
| Msa0063830 | Msa0386390 | 0.801389 | 9.212514e-49 | -8.615850e-47 |
| Msa0063830 | Msa0393140 | 0.815336 | 9.737875e-52 | -8.615850e-47 |
| Msa0063830 | Msa0396970 | 0.820282 | 7.446773e-53 | -8.615850e-47 |
| Msa0063830 | Msa0397000 | 0.824457 | 7.988719e-54 | -8.615850e-47 |
| Msa0063830 | Msa0398850 | 0.812758 | 3.608940e-51 | -8.615850e-47 |
| Msa0063830 | Msa0420800 | 0.802008 | 6.877532e-49 | -8.615850e-47 |
| Msa0063830 | Msa0421100 | 0.831913 | 1.274827e-55 | -8.615850e-47 |
| Msa0063830 | Msa0426480 | 0.803177 | 3.947771e-49 | -8.615850e-47 |
| Msa0063830 | Msa0434820 | 0.812688 | 3.738426e-51 | -8.615850e-47 |
| Msa0063830 | Msa0438440 | 0.803113 | 4.070437e-49 | -8.615850e-47 |
| Msa0063830 | Msa0447830 | 0.837357 | 5.451216e-57 | -8.615850e-47 |
| Msa0063830 | Msa0449030 | 0.812280 | 4.589185e-51 | -8.615850e-47 |
| Msa0063830 | Msa0455200 | 0.810575 | 1.076649e-50 | -8.615850e-47 |
| Msa0063830 | Msa0471700 | 0.811134 | 8.151160e-51 | -8.615850e-47 |
| Msa0063830 | Msa0473010 | 0.817070 | 3.989723e-52 | -8.615850e-47 |
| Msa0063830 | Msa0474220 | 0.822731 | 2.024399e-53 | -8.615850e-47 |
| Msa0063830 | Msa0478730 | 0.818506 | 1.891448e-52 | -8.615850e-47 |
| Msa0063830 | Msa0485210 | 0.812305 | 4.533772e-51 | -8.615850e-47 |
| Msa0063830 | Msa0492000 | 0.826751 | 2.284147e-54 | -8.615850e-47 |
| Msa0063830 | Msa0495510 | 0.865199 | 7.021215e-65 | -8.615850e-47 |
| Msa0063830 | Msa0497060 | 0.808025 | 3.793286e-50 | -8.615850e-47 |
| Msa0063830 | Msa0503120 | 0.801855 | 7.395444e-49 | -8.615850e-47 |
| Msa0063830 | Msa0510550 | 0.802471 | 5.523809e-49 | -8.615850e-47 |
| Msa0063830 | Msa0513660 | 0.826704 | 2.344401e-54 | -8.615850e-47 |
| Msa0063830 | Msa0517190 | 0.818139 | 2.290215e-52 | -8.615850e-47 |
| Msa0063830 | Msa0521190 | 0.820909 | 5.346171e-53 | -8.615850e-47 |
| Msa0063830 | Msa0522510 | 0.807398 | 5.155451e-50 | -8.615850e-47 |
| Msa0063830 | Msa0522810 | 0.837292 | 5.666268e-57 | -8.615850e-47 |
| Msa0063830 | Msa0523400 | 0.802108 | 6.560521e-49 | -8.615850e-47 |
| Msa0063830 | Msa0524510 | 0.817589 | 3.048993e-52 | -8.615850e-47 |
| Msa0063830 | Msa0528740 | 0.809442 | 1.888760e-50 | -8.615850e-47 |
| Msa0063830 | Msa0528830 | 0.838020 | 3.684853e-57 | -8.615850e-47 |
| Msa0063830 | Msa0539400 | 0.817830 | 2.689691e-52 | -8.615850e-47 |
| Msa0063830 | Msa0540800 | 0.850677 | 1.454943e-60 | -8.615850e-47 |
| Msa0063830 | Msa0550770 | 0.840501 | 8.370874e-58 | -8.615850e-47 |
| Msa0063830 | Msa0550800 | 0.833660 | 4.694860e-56 | -8.615850e-47 |
| Msa0063830 | Msa0552660 | 0.805944 | 1.045116e-49 | -8.615850e-47 |
| Msa0063830 | Msa0553230 | 0.834967 | 2.205904e-56 | -8.615850e-47 |
| Msa0063830 | Msa0554170 | 0.852499 | 4.436063e-61 | -8.615850e-47 |
| Msa0063830 | Msa0555980 | 0.805460 | 1.320817e-49 | -8.615850e-47 |
| Msa0063830 | Msa0557770 | 0.831122 | 1.996362e-55 | -8.615850e-47 |
| Msa0063830 | Msa0559890 | 0.833170 | 6.220163e-56 | -8.615850e-47 |
| Msa0063830 | Msa0562680 | 0.803143 | 4.012644e-49 | -8.615850e-47 |
| Msa0063830 | Msa0565530 | 0.821337 | 4.260958e-53 | -8.615850e-47 |
| Msa0063830 | Msa0569540 | 0.813851 | 2.076217e-51 | -8.615850e-47 |
| Msa0063830 | Msa0569930 | 0.811313 | 7.451616e-51 | -8.615850e-47 |
| Msa0063830 | Msa0573970 | 0.855199 | 7.404926e-62 | -8.615850e-47 |
| Msa0063830 | Msa0574350 | 0.818966 | 1.487559e-52 | -8.615850e-47 |
| Msa0063830 | Msa0576640 | 0.838494 | 2.781662e-57 | -8.615850e-47 |
| Msa0063830 | Msa0580360 | 0.828520 | 8.589917e-55 | -8.615850e-47 |
| Msa0063830 | Msa0581190 | 0.842973 | 1.863601e-58 | -8.615850e-47 |
| Msa0063830 | Msa0581490 | 0.847917 | 8.537843e-60 | -8.615850e-47 |
| Msa0063830 | Msa0610300 | 0.801758 | 7.742383e-49 | -8.615850e-47 |
| Msa0063830 | Msa0614020 | 0.805459 | 1.321260e-49 | -8.615850e-47 |
| Msa0063830 | Msa0622690 | 0.827262 | 1.724315e-54 | -8.615850e-47 |
| Msa0063830 | Msa0623270 | 0.802934 | 4.432166e-49 | -8.615850e-47 |
| Msa0063830 | Msa0636840 | 0.815653 | 8.278596e-52 | -8.615850e-47 |
| Msa0063830 | Msa0638500 | 0.841290 | 5.199120e-58 | -8.615850e-47 |
| Msa0063830 | Msa0645780 | 0.806437 | 8.231501e-50 | -8.615850e-47 |
| Msa0063830 | Msa0648630 | 0.807935 | 3.963166e-50 | -8.615850e-47 |
| Msa0063830 | Msa0650360 | 0.807982 | 3.873715e-50 | -8.615850e-47 |
| Msa0063830 | Msa0653090 | 0.825516 | 4.492052e-54 | -8.615850e-47 |
| Msa0063830 | Msa0663540 | 0.806412 | 8.330841e-50 | -8.615850e-47 |
| Msa0063830 | Msa0668160 | 0.835015 | 2.145769e-56 | -8.615850e-47 |
| Msa0063830 | Msa0675230 | 0.951911 | 7.485586e-110 | -8.615850e-47 |
| Msa0063830 | Msa0684520 | 0.819030 | 1.438520e-52 | -8.615850e-47 |
| Msa0063830 | Msa0687540 | 0.808446 | 3.084188e-50 | -8.615850e-47 |
| Msa0063830 | Msa0687620 | 0.824855 | 6.438049e-54 | -8.615850e-47 |
| Msa0063830 | Msa0691100 | 0.808396 | 3.161172e-50 | -8.615850e-47 |
| Msa0063830 | Msa0692480 | 0.839041 | 2.008029e-57 | -8.615850e-47 |
| Msa0063830 | Msa0695470 | 0.802435 | 5.617319e-49 | -8.615850e-47 |
| Msa0063830 | Msa0697180 | 0.837907 | 3.940628e-57 | -8.615850e-47 |
| Msa0063830 | Msa0702360 | 0.804984 | 1.661376e-49 | -8.615850e-47 |
| Msa0063830 | Msa0702560 | 0.813741 | 2.195698e-51 | -8.615850e-47 |
| Msa0063830 | Msa0706130 | 0.813379 | 2.637533e-51 | -8.615850e-47 |
| Msa0063830 | Msa0708380 | 0.840164 | 1.025446e-57 | -8.615850e-47 |
| Msa0063830 | Msa0708450 | 0.801784 | 7.647523e-49 | -8.615850e-47 |
| Msa0063830 | Msa0710950 | 0.850766 | 1.373532e-60 | -8.615850e-47 |
| Msa0063830 | Msa0711510 | 0.804717 | 1.888847e-49 | -8.615850e-47 |
| Msa0063830 | Msa0715180 | 0.807559 | 4.765011e-50 | -8.615850e-47 |
| Msa0063830 | Msa0717540 | 0.807089 | 5.992981e-50 | -8.615850e-47 |
| Msa0063830 | Msa0720850 | 0.802759 | 4.816961e-49 | -8.615850e-47 |
| Msa0063830 | Msa0751640 | 0.800168 | 1.635433e-48 | -8.615850e-47 |
| Msa0063830 | Msa0755570 | 0.838806 | 2.310604e-57 | -8.615850e-47 |
| Msa0063830 | Msa0756670 | 0.811105 | 8.266527e-51 | -8.615850e-47 |
| Msa0063830 | Msa0761930 | 0.800414 | 1.457619e-48 | -8.615850e-47 |
| Msa0063830 | Msa0763350 | 0.826318 | 2.897193e-54 | -8.615850e-47 |
| Msa0063830 | Msa0766540 | 0.804489 | 2.107672e-49 | -8.615850e-47 |
| Msa0063830 | Msa0767040 | 0.810214 | 1.288165e-50 | -8.615850e-47 |
| Msa0063830 | Msa0772400 | 0.802216 | 6.232402e-49 | -8.615850e-47 |
| Msa0063830 | Msa0776290 | 0.821716 | 3.482565e-53 | -8.615850e-47 |
| Msa0063830 | Msa0790380 | 0.805534 | 1.274689e-49 | -8.615850e-47 |
| Msa0063830 | Msa0791170 | 0.835535 | 1.585789e-56 | -8.615850e-47 |
| Msa0063830 | Msa0793590 | 0.805581 | 1.246104e-49 | -8.615850e-47 |
| Msa0063830 | Msa0795850 | 0.824594 | 7.416449e-54 | -8.615850e-47 |
| Msa0063830 | Msa0797980 | 0.826488 | 2.638779e-54 | -8.615850e-47 |
| Msa0063830 | Msa0803220 | 0.839016 | 2.038421e-57 | -8.615850e-47 |
| Msa0063830 | Msa0828810 | 0.800424 | 1.450745e-48 | -8.615850e-47 |
| Msa0063830 | Msa0829430 | 0.810520 | 1.106742e-50 | -8.615850e-47 |
| Msa0063830 | Msa0829570 | 0.809938 | 1.477689e-50 | -8.615850e-47 |
| Msa0063830 | Msa0830830 | 0.815665 | 8.230599e-52 | -8.615850e-47 |
| Msa0063830 | Msa0833630 | 0.800217 | 1.598235e-48 | -8.615850e-47 |
| Msa0063830 | Msa0835030 | 0.845345 | 4.303589e-59 | -8.615850e-47 |
| Msa0063830 | Msa0836060 | 0.815648 | 8.300017e-52 | -8.615850e-47 |
| Msa0063830 | Msa0837590 | 0.811931 | 5.470322e-51 | -8.615850e-47 |
| Msa0063830 | Msa0838100 | 0.850587 | 1.542190e-60 | -8.615850e-47 |
| Msa0063830 | Msa0846180 | 0.809152 | 2.178885e-50 | -8.615850e-47 |
| Msa0063830 | Msa0848720 | 0.807484 | 4.941210e-50 | -8.615850e-47 |
| Msa0063830 | Msa0865280 | 0.800043 | 1.734266e-48 | -8.615850e-47 |
| Msa0063830 | Msa0866650 | 0.813944 | 1.980140e-51 | -8.615850e-47 |
| Msa0063830 | Msa0880170 | 0.814973 | 1.172459e-51 | -8.615850e-47 |
| Msa0063830 | Msa0901140 | 0.813422 | 2.580997e-51 | -8.615850e-47 |
| Msa0063830 | Msa0925630 | 0.801712 | 7.910057e-49 | -8.615850e-47 |
| Msa0063830 | Msa0929940 | 0.811427 | 7.039094e-51 | -8.615850e-47 |
| Msa0063830 | Msa0931730 | 0.804592 | 2.006389e-49 | -8.615850e-47 |
| Msa0063830 | Msa0933220 | 0.810692 | 1.015679e-50 | -8.615850e-47 |
| Msa0063830 | Msa0964570 | 0.804278 | 2.332301e-49 | -8.615850e-47 |
| Msa0063830 | Msa1010470 | 0.808201 | 3.478708e-50 | -8.615850e-47 |
| Msa0063830 | Msa1013510 | 0.814799 | 1.281427e-51 | -8.615850e-47 |
| Msa0063830 | Msa1013560 | 0.812741 | 3.638818e-51 | -8.615850e-47 |
| Msa0063830 | Msa1031650 | 0.806693 | 7.268427e-50 | -8.615850e-47 |
| Msa0063830 | Msa1033460 | 0.811282 | 7.569780e-51 | -8.615850e-47 |
| Msa0063830 | Msa1038040 | 0.809927 | 1.485704e-50 | -8.615850e-47 |
| Msa0063830 | Msa1040390 | 0.833072 | 6.580405e-56 | -8.615850e-47 |
| Msa0063830 | Msa1052600 | 0.808409 | 3.141495e-50 | -8.615850e-47 |
| Msa0063830 | Msa1056790 | 0.803997 | 2.668631e-49 | -8.615850e-47 |
| Msa0063830 | Msa1071380 | 0.800211 | 1.602767e-48 | -8.615850e-47 |
| Msa0063830 | Msa1072430 | 0.805615 | 1.225258e-49 | -8.615850e-47 |
| Msa0063830 | Msa1072640 | 0.811488 | 6.827641e-51 | -8.615850e-47 |
| Msa0063830 | Msa1083140 | 0.845174 | 4.788081e-59 | -8.615850e-47 |
| Msa0063830 | Msa1092430 | 0.821681 | 3.548261e-53 | -8.615850e-47 |
| Msa0063830 | Msa1096570 | 0.807889 | 4.054331e-50 | -8.615850e-47 |
| Msa0063830 | Msa1113780 | 0.806646 | 7.436436e-50 | -8.615850e-47 |
| Msa0063830 | Msa1118460 | 0.804798 | 1.817039e-49 | -8.615850e-47 |
| Msa0063830 | Msa1121290 | 0.801639 | 8.187774e-49 | -8.615850e-47 |
| Msa0063830 | Msa1122720 | 0.816069 | 6.686599e-52 | -8.615850e-47 |
| Msa0063830 | Msa1126910 | 0.807289 | 5.436006e-50 | -8.615850e-47 |
| Msa0063830 | Msa1126980 | 0.824851 | 6.451186e-54 | -8.615850e-47 |
| Msa0063830 | Msa1127900 | 0.817842 | 2.673286e-52 | -8.615850e-47 |
| Msa0063830 | Msa1130660 | 0.811391 | 7.166377e-51 | -8.615850e-47 |
| Msa0063830 | Msa1130730 | 0.810503 | 1.115791e-50 | -8.615850e-47 |
| Msa0063830 | Msa1131300 | 0.805744 | 1.151482e-49 | -8.615850e-47 |
| Msa0063830 | Msa1132820 | 0.823885 | 1.088451e-53 | -8.615850e-47 |
| Msa0063830 | Msa1140480 | 0.810210 | 1.290870e-50 | -8.615850e-47 |
| Msa0063830 | Msa1150250 | 0.801857 | 7.387276e-49 | -8.615850e-47 |
| Msa0063830 | Msa1160470 | 0.803802 | 2.929899e-49 | -8.615850e-47 |
| Msa0063830 | Msa1165810 | 0.815085 | 1.107332e-51 | -8.615850e-47 |
| Msa0063830 | Msa1166020 | 0.839769 | 1.299388e-57 | -8.615850e-47 |
| Msa0063830 | Msa1166960 | 0.804274 | 2.336872e-49 | -8.615850e-47 |
| Msa0063830 | Msa1184010 | 0.804415 | 2.184237e-49 | -8.615850e-47 |
| Msa0063830 | Msa1184640 | 0.801537 | 8.594184e-49 | -8.615850e-47 |
| Msa0063830 | Msa1191960 | 0.801690 | 7.994170e-49 | -8.615850e-47 |
| Msa0063830 | Msa1200060 | 0.800824 | 1.202035e-48 | -8.615850e-47 |
| Msa0063830 | Msa1206440 | 0.825021 | 5.881810e-54 | -8.615850e-47 |
| Msa0063830 | Msa1206510 | 0.803948 | 2.732117e-49 | -8.615850e-47 |
| Msa0063830 | Msa1207660 | 0.816556 | 5.202717e-52 | -8.615850e-47 |
| Msa0063830 | Msa1207770 | 0.824063 | 9.888987e-54 | -8.615850e-47 |
| Msa0063830 | Msa1215790 | 0.805483 | 1.306258e-49 | -8.615850e-47 |
| Msa0063830 | Msa1221540 | 0.828925 | 6.855021e-55 | -8.615850e-47 |
| Msa0063830 | Msa1224820 | 0.809730 | 1.638083e-50 | -8.615850e-47 |
| Msa0063830 | Msa1225240 | 0.827919 | 1.198929e-54 | -8.615850e-47 |
| Msa0063830 | Msa1228350 | 0.805004 | 1.645306e-49 | -8.615850e-47 |
| Msa0063830 | Msa1228460 | 0.809042 | 2.300475e-50 | -8.615850e-47 |
| Msa0063830 | Msa1235040 | 0.822248 | 2.621964e-53 | -8.615850e-47 |
| Msa0063830 | Msa1236090 | 0.811488 | 6.828751e-51 | -8.615850e-47 |
| Msa0063830 | Msa1243860 | 0.817599 | 3.032783e-52 | -8.615850e-47 |
| Msa0063830 | Msa1254990 | 0.824579 | 7.477477e-54 | -8.615850e-47 |
| Msa0063830 | Msa1257860 | 0.816744 | 4.722475e-52 | -8.615850e-47 |
| Msa0063830 | Msa1258100 | 0.806808 | 6.871413e-50 | -8.615850e-47 |
| Msa0063830 | Msa1258200 | 0.837729 | 4.377995e-57 | -8.615850e-47 |
| Msa0063830 | Msa1258770 | 0.822001 | 2.991514e-53 | -8.615850e-47 |
| Msa0063830 | Msa1258940 | 0.805294 | 1.430758e-49 | -8.615850e-47 |
| Msa0063830 | Msa1263970 | 0.801657 | 8.119868e-49 | -8.615850e-47 |
| Msa0063830 | Msa1264960 | 0.826694 | 2.356652e-54 | -8.615850e-47 |
| Msa0063830 | Msa1266710 | -0.800044 | 1.733744e-48 | -8.615850e-47 |
| Msa0063830 | Msa1270860 | 0.806637 | 7.467242e-50 | -8.615850e-47 |
| Msa0063830 | Msa1286470 | 0.806726 | 7.150601e-50 | -8.615850e-47 |
| Msa0063830 | Msa1286950 | 0.808224 | 3.440607e-50 | -8.615850e-47 |
| Msa0063830 | Msa1297720 | 0.809458 | 1.873137e-50 | -8.615850e-47 |
| Msa0063830 | Msa1302750 | 0.814628 | 1.398412e-51 | -8.615850e-47 |
| Msa0063830 | Msa1303130 | 0.829932 | 3.903699e-55 | -8.615850e-47 |
| Msa0063830 | Msa1305650 | 0.807595 | 4.680695e-50 | -8.615850e-47 |
| Msa0063830 | Msa1308010 | 0.821954 | 3.068309e-53 | -8.615850e-47 |
| Msa0063830 | Msa1319230 | 0.802613 | 5.163512e-49 | -8.615850e-47 |
| Msa0063830 | Msa1329080 | 0.804308 | 2.299073e-49 | -8.615850e-47 |
| Msa0063830 | Msa1330280 | 0.826441 | 2.707934e-54 | -8.615850e-47 |
| Msa0063830 | Msa1331530 | 0.824550 | 7.595838e-54 | -8.615850e-47 |
| Msa0063830 | Msa1334020 | 0.824449 | 8.023091e-54 | -8.615850e-47 |
| Msa0063830 | Msa1335210 | 0.819591 | 1.071449e-52 | -8.615850e-47 |
| Msa0063830 | Msa1335500 | -0.808005 | 3.830922e-50 | -8.615850e-47 |
| Msa0063830 | Msa1337950 | 0.811714 | 6.098535e-51 | -8.615850e-47 |
| Msa0063830 | Msa1338590 | 0.801701 | 7.953614e-49 | -8.615850e-47 |
| Msa0063830 | Msa1344940 | 0.813205 | 2.879717e-51 | -8.615850e-47 |
| Msa0063830 | Msa1345120 | 0.810001 | 1.432153e-50 | -8.615850e-47 |
| Msa0063830 | Msa1346340 | 0.801108 | 1.052000e-48 | -8.615850e-47 |
| Msa0063830 | Msa1356680 | 0.819010 | 1.453946e-52 | -8.615850e-47 |
| Msa0063830 | Msa1359620 | 0.805408 | 1.354032e-49 | -8.615850e-47 |
| Msa0063830 | Msa1366400 | 0.818046 | 2.404092e-52 | -8.615850e-47 |
| Msa0063830 | Msa1366700 | 0.811643 | 6.319233e-51 | -8.615850e-47 |
| Msa0063830 | Msa1368150 | 0.817538 | 3.130172e-52 | -8.615850e-47 |
| Msa0063830 | Msa1369390 | 0.812741 | 3.639737e-51 | -8.615850e-47 |
| Msa0063830 | Msa1369900 | 0.807971 | 3.894539e-50 | -8.615850e-47 |
| Msa0063830 | Msa1371840 | 0.820012 | 8.586357e-53 | -8.615850e-47 |
| Msa0063830 | Msa1373340 | 0.813305 | 2.738290e-51 | -8.615850e-47 |
| Msa0063830 | Msa1375600 | 0.811327 | 7.400203e-51 | -8.615850e-47 |
| Msa0063830 | Msa1376510 | 0.804378 | 2.222993e-49 | -8.615850e-47 |
| Msa0063830 | Msa1376560 | 0.801721 | 7.877175e-49 | -8.615850e-47 |
| Msa0063830 | Msa1376590 | 0.818777 | 1.642276e-52 | -8.615850e-47 |
| Msa0063830 | Msa1379360 | 0.807139 | 5.847595e-50 | -8.615850e-47 |
| Msa0063830 | Msa1384980 | 0.810594 | 1.066576e-50 | -8.615850e-47 |
| Msa0063830 | Msa1387650 | 0.804411 | 2.187942e-49 | -8.615850e-47 |
| Msa0063830 | Msa1393720 | 0.814914 | 1.208606e-51 | -8.615850e-47 |
| Msa0063830 | Msa1396310 | 0.840068 | 1.086315e-57 | -8.615850e-47 |
| Msa0063830 | Msa1403700 | 0.803344 | 3.645450e-49 | -8.615850e-47 |
| Msa0063830 | Msa1403900 | 0.802794 | 4.736883e-49 | -8.615850e-47 |
| Msa0063830 | Msa1405380 | 0.800518 | 1.388269e-48 | -8.615850e-47 |
| Msa0063830 | Msa1408190 | 0.814080 | 1.848659e-51 | -8.615850e-47 |
| Msa0063830 | Msa1412740 | 0.806968 | 6.356639e-50 | -8.615850e-47 |
| Msa0063830 | Msa1418600 | 0.805210 | 1.490178e-49 | -8.615850e-47 |
| Msa0063830 | Msa1422490 | 0.801096 | 1.058059e-48 | -8.615850e-47 |
| Msa0063830 | Msa1422500 | 0.804814 | 1.802794e-49 | -8.615850e-47 |
| Msa0063830 | Msa1437320 | 0.815327 | 9.784837e-52 | -8.615850e-47 |
| Msa0063830 | Msa1443280 | 0.805668 | 1.194331e-49 | -8.615850e-47 |
| Msa0063830 | Msa1444070 | 0.803564 | 3.281818e-49 | -8.615850e-47 |
| Msa0063830 | Msa1448990 | 0.814771 | 1.300060e-51 | -8.615850e-47 |
| Msa0063830 | Msa1453540 | 0.808812 | 2.577170e-50 | -8.615850e-47 |
| Msa0063830 | Msa1455120 | 0.800870 | 1.176656e-48 | -8.615850e-47 |
| Msa0063830 | Msa1456170 | 0.844632 | 6.703154e-59 | -8.615850e-47 |
| Msa0063830 | Msa1456620 | 0.808217 | 3.451254e-50 | -8.615850e-47 |
| Msa0063830 | Msa1456830 | 0.813194 | 2.896383e-51 | -8.615850e-47 |
| Msa0063830 | Msa1459590 | 0.834325 | 3.199615e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063830 | MtrunA17_Chr4g0018621 | 78.896 | 308 | 30 | 3 | 1 | 307 | 1 | 274 | 5.58e-156 | 436 |
| Msa0063830 | MtrunA17_Chr7g0232051 | 33.036 | 112 | 70 | 1 | 155 | 266 | 84 | 190 | 1.78e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0063830 | AT4G25170.1 | 34.978 | 223 | 117 | 6 | 102 | 304 | 127 | 341 | 3.04e-30 | 117 |
| Msa0063830 | AT4G25170.2 | 35.849 | 212 | 108 | 6 | 113 | 304 | 153 | 356 | 1.39e-29 | 115 |
| Msa0063830 | AT5G61490.1 | 39.759 | 166 | 87 | 2 | 140 | 304 | 102 | 255 | 7.00e-29 | 111 |
Find 62 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTATTGTTTAGCAAATT+TGG | 0.091915 | 1_2:-24562745 | Msa0063830:CDS |
| AAAGAGTTTAAAACAGAAAA+AGG | 0.187566 | 1_2:+24564782 | None:intergenic |
| CAGCATAAGTGCAGGGTGTT+AGG | 0.262984 | 1_2:-24562693 | Msa0063830:CDS |
| CTCGATTACTTCAATGAGTT+TGG | 0.273662 | 1_2:+24561652 | None:intergenic |
| CTTCACGTGCCGAGCTCCTT+AGG | 0.274000 | 1_2:-24562665 | Msa0063830:CDS |
| GCCAGTAGTAGTAGTATTAT+TGG | 0.291374 | 1_2:+24564745 | None:intergenic |
| TTTCTTGAACTTAATTTAGA+TGG | 0.293854 | 1_2:-24561292 | Msa0063830:three_prime_UTR |
| CCAGTAGTAGTAGTATTATT+GGG | 0.320185 | 1_2:+24564746 | None:intergenic |
| AAAACATTTGTTGTATTGTC+AGG | 0.320543 | 1_2:+24561701 | None:intergenic |
| TTCTTTCATGCTTTCGATCA+TGG | 0.323980 | 1_2:-24561531 | Msa0063830:CDS |
| TGATAAAGATTTGCGTTTGC+AGG | 0.345537 | 1_2:+24564847 | None:intergenic |
| TATCAACCGATGAAGCTGTT+TGG | 0.376110 | 1_2:-24562127 | Msa0063830:CDS |
| ATCAACCGATGAAGCTGTTT+GGG | 0.379156 | 1_2:-24562126 | Msa0063830:CDS |
| GCAGACTGATCCCTCTGTTC+AGG | 0.380216 | 1_2:-24562484 | Msa0063830:intron |
| TGAGAAGAATAAGAAGATAA+TGG | 0.393458 | 1_2:+24564815 | None:intergenic |
| AATAAGAAGATAATGGAAAA+GGG | 0.394078 | 1_2:+24564822 | None:intergenic |
| GAATAAGAAGATAATGGAAA+AGG | 0.394823 | 1_2:+24564821 | None:intergenic |
| CCCAATAATACTACTACTAC+TGG | 0.415755 | 1_2:-24564746 | Msa0063830:CDS |
| AGCATAAGTGCAGGGTGTTA+GGG | 0.422717 | 1_2:-24562692 | Msa0063830:CDS |
| AATTATGTTGCGCCTAACTT+TGG | 0.436566 | 1_2:+24561480 | None:intergenic |
| AGGAGCTCGGCACGTGAAGC+AGG | 0.444376 | 1_2:+24562669 | None:intergenic |
| TATTCTCATCTTCAGAAACT+TGG | 0.451065 | 1_2:+24562598 | None:intergenic |
| CCGAAAATGCTACAGGATGA+TGG | 0.461296 | 1_2:-24562540 | Msa0063830:CDS |
| GGATTATATGGAAACAAAGA+TGG | 0.462920 | 1_2:+24562561 | None:intergenic |
| ATGAAGTTGTTCAGCAACTC+AGG | 0.463056 | 1_2:-24562088 | Msa0063830:CDS |
| CATGTGTAAAAGAGTGTTCA+TGG | 0.468923 | 1_2:+24561421 | None:intergenic |
| TTCACGTGCCGAGCTCCTTA+GGG | 0.470566 | 1_2:-24562664 | Msa0063830:CDS |
| GAAATTGAGCTAGGCAGTCT+TGG | 0.472920 | 1_2:-24562621 | Msa0063830:CDS |
| TCCTCCTCCTTCTCAGACTG+AGG | 0.507420 | 1_2:-24564678 | Msa0063830:intron |
| ATATAATCCGAAAATGCTAC+AGG | 0.513690 | 1_2:-24562547 | Msa0063830:CDS |
| GGTGCATCGTAACCAAAGTT+AGG | 0.522125 | 1_2:-24561492 | Msa0063830:exon |
| AAACATTTGTTGTATTGTCA+GGG | 0.524197 | 1_2:+24561702 | None:intergenic |
| ATAAATCTCAGCATAAGTGC+AGG | 0.535395 | 1_2:-24562701 | Msa0063830:CDS |
| GGTGTTGATGAACCCCTCAT+TGG | 0.538063 | 1_2:-24564701 | Msa0063830:CDS |
| GTGCCGAGCTCCTTAGGGAC+AGG | 0.542730 | 1_2:-24562659 | Msa0063830:CDS |
| AGAAGGAGGAGGACCAATGA+GGG | 0.542894 | 1_2:+24564688 | None:intergenic |
| TGTTGAAATACCTGTCCCTA+AGG | 0.548759 | 1_2:+24562649 | None:intergenic |
| AGCCTCCCAAACAGCTTCAT+CGG | 0.552589 | 1_2:+24562121 | None:intergenic |
| CATCAACACCATCATCATCA+TGG | 0.563044 | 1_2:+24564714 | None:intergenic |
| ATAAGAAGATAATGGAAAAG+GGG | 0.572203 | 1_2:+24564823 | None:intergenic |
| CTGAAGATGAGAATATAGAC+TGG | 0.575112 | 1_2:-24562590 | Msa0063830:CDS |
| AACAAACTAGAAATTGAGCT+AGG | 0.577265 | 1_2:-24562630 | Msa0063830:CDS |
| ACGGTTACAATGAAACTTCG+CGG | 0.583047 | 1_2:-24564890 | None:intergenic |
| CAGTAGTAGTAGTATTATTG+GGG | 0.585051 | 1_2:+24564747 | None:intergenic |
| TGAAGTTGTTCAGCAACTCA+GGG | 0.586059 | 1_2:-24562087 | Msa0063830:CDS |
| GATCATGGTCTTGTTGATTG+TGG | 0.588306 | 1_2:-24561516 | Msa0063830:CDS |
| ATAGACTGCACCTGAACAGA+GGG | 0.590888 | 1_2:+24562474 | None:intergenic |
| ATACCTGTCCCTAAGGAGCT+CGG | 0.592229 | 1_2:+24562656 | None:intergenic |
| TCATGAACCTCAGTCTGAGA+AGG | 0.608952 | 1_2:+24564671 | None:intergenic |
| TTTGCGTTTGCAGGTACGTG+TGG | 0.611697 | 1_2:+24564856 | None:intergenic |
| CATGGTCTTGTTGATTGTGG+TGG | 0.612289 | 1_2:-24561513 | Msa0063830:CDS |
| ACCTCAGTCTGAGAAGGAGG+AGG | 0.614509 | 1_2:+24564677 | None:intergenic |
| GAGAAGGAGGAGGACCAATG+AGG | 0.618951 | 1_2:+24564687 | None:intergenic |
| TGAACCTCAGTCTGAGAAGG+AGG | 0.629101 | 1_2:+24564674 | None:intergenic |
| GATGCTATCCATGATGATGA+TGG | 0.636543 | 1_2:-24564722 | Msa0063830:CDS |
| AACCGATGAAGCTGTTTGGG+AGG | 0.644231 | 1_2:-24562123 | Msa0063830:CDS |
| CATAGACTGCACCTGAACAG+AGG | 0.657496 | 1_2:+24562473 | None:intergenic |
| TAAATCTCAGCATAAGTGCA+GGG | 0.673955 | 1_2:-24562700 | Msa0063830:CDS |
| GAAGGAGGAGGACCAATGAG+GGG | 0.689346 | 1_2:+24564689 | None:intergenic |
| AAGTTGTTCAGCAACTCAGG+GGG | 0.698699 | 1_2:-24562085 | Msa0063830:CDS |
| GAAGTTGTTCAGCAACTCAG+GGG | 0.702778 | 1_2:-24562086 | Msa0063830:CDS |
| AGTAGTAGTAGTATTATTGG+GGG | 0.747404 | 1_2:+24564748 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTGTTTAAGTGATAT+TGG | - | chr1_2:24561610-24561629 | Msa0063830:CDS | 15.0% |
| !! | AAACAATATGAGATTAATAT+AGG | + | chr1_2:24562237-24562256 | None:intergenic | 15.0% |
| !! | AGAGTTAAAAAAAATGATAT+AGG | - | chr1_2:24562261-24562280 | Msa0063830:intron | 15.0% |
| !!! | TGAATTTGATTTTTTGAATT+CGG | - | chr1_2:24562618-24562637 | Msa0063830:CDS | 15.0% |
| !!! | TTATAGATATTTGATAACTA+AGG | - | chr1_2:24563983-24564002 | Msa0063830:intron | 15.0% |
| !!! | TTTTCGTTTTCTTTAATATT+TGG | - | chr1_2:24564127-24564146 | Msa0063830:intron | 15.0% |
| !!! | AAATTTTTTTATCACAATCT+TGG | + | chr1_2:24564544-24564563 | None:intergenic | 15.0% |
| !!! | AATAAGAAGATAATGGAAAA+GGG | + | chr1_2:24561344-24561363 | None:intergenic | 20.0% |
| !!! | AAAGAGTTTAAAACAGAAAA+AGG | + | chr1_2:24561384-24561403 | None:intergenic | 20.0% |
| !!! | CATACATAAGCTATTTTTAT+AGG | - | chr1_2:24561721-24561740 | Msa0063830:CDS | 20.0% |
| !!! | GATTTTTTTCGAATTATTAG+CGG | + | chr1_2:24562076-24562095 | None:intergenic | 20.0% |
| !!! | CATAATTATATTGGTAATGA+TGG | - | chr1_2:24562179-24562198 | Msa0063830:intron | 20.0% |
| !! | TGAGATTAATATAGGATATA+TGG | + | chr1_2:24562229-24562248 | None:intergenic | 20.0% |
| !! | ATTTGACTGATTAAAAACTT+TGG | - | chr1_2:24562290-24562309 | Msa0063830:intron | 20.0% |
| !!! | GTAGTATTTTGAATTCAATT+TGG | - | chr1_2:24562439-24562458 | Msa0063830:intron | 20.0% |
| !!! | ATTTTCATCTAAAATTTGCT+CGG | - | chr1_2:24562737-24562756 | Msa0063830:CDS | 20.0% |
| !! | GGTTAAAATTCATATAACAA+TGG | + | chr1_2:24562783-24562802 | None:intergenic | 20.0% |
| !! | AAACTATTGTTTAGCAAATT+TGG | - | chr1_2:24563418-24563437 | Msa0063830:intron | 20.0% |
| !!! | ATACAACAAATGTTTTGATT+TGG | - | chr1_2:24564469-24564488 | Msa0063830:intron | 20.0% |
| !!! | TACATTACAACACAATTTTT+TGG | - | chr1_2:24564710-24564729 | Msa0063830:CDS | 20.0% |
| !! | TTTCTTGAACTTAATTTAGA+TGG | - | chr1_2:24564871-24564890 | Msa0063830:CDS | 20.0% |
| !!! | ATAAGAAGATAATGGAAAAG+GGG | + | chr1_2:24561343-24561362 | None:intergenic | 25.0% |
| !!! | GAATAAGAAGATAATGGAAA+AGG | + | chr1_2:24561345-24561364 | None:intergenic | 25.0% |
| ! | TGAGAAGAATAAGAAGATAA+TGG | + | chr1_2:24561351-24561370 | None:intergenic | 25.0% |
| ! | CTTCAACGGTAAAAATATAT+TGG | - | chr1_2:24561528-24561547 | Msa0063830:CDS | 25.0% |
| !! | TTAAGTGATATTGGTAATCA+TGG | - | chr1_2:24561619-24561638 | Msa0063830:CDS | 25.0% |
| !! | ATATTGGTAATCATGGTATA+AGG | - | chr1_2:24561626-24561645 | Msa0063830:CDS | 25.0% |
| !!! | CATAAGCTATTTTTATAGGA+AGG | - | chr1_2:24561725-24561744 | Msa0063830:CDS | 25.0% |
| ! | AAAATAAGCTGAAGCTATAT+TGG | - | chr1_2:24561817-24561836 | Msa0063830:intron | 25.0% |
| !!! | CTTCTAAAACCCTTATATTA+AGG | - | chr1_2:24561987-24562006 | Msa0063830:intron | 25.0% |
| ! | TTCAGTGTAATTATAAGTGT+CGG | - | chr1_2:24562102-24562121 | Msa0063830:CDS | 25.0% |
| ! | ACCAATATAATTATGAAGCA+CGG | + | chr1_2:24562174-24562193 | None:intergenic | 25.0% |
| !! | TAAATTTGATTAGCTGATGT+TGG | - | chr1_2:24562353-24562372 | Msa0063830:intron | 25.0% |
| ! | TGAATTCAATTTGGCAAATT+TGG | - | chr1_2:24562448-24562467 | Msa0063830:intron | 25.0% |
| !!! | TGTGTTTCATAGATTTTAAC+TGG | - | chr1_2:24562945-24562964 | Msa0063830:intron | 25.0% |
| !! | AACTAGCAGTAAAATTTTAG+TGG | - | chr1_2:24563213-24563232 | Msa0063830:intron | 25.0% |
| !!! | AACAATTTGCTGAAGTTTTT+CGG | - | chr1_2:24563870-24563889 | Msa0063830:intron | 25.0% |
| ! | ATATAACAATAGCTGCTATT+CGG | + | chr1_2:24563919-24563938 | None:intergenic | 25.0% |
| ! | AAAGAGATAATTTAACCATG+AGG | - | chr1_2:24563942-24563961 | Msa0063830:intron | 25.0% |
| ! | GAGTACATAGATTAGATTTA+TGG | - | chr1_2:24564297-24564316 | Msa0063830:intron | 25.0% |
| ! | ATTATAGAATTATGACCTAC+TGG | - | chr1_2:24564352-24564371 | Msa0063830:intron | 25.0% |
| !!! | AAACATTTGTTGTATTGTCA+GGG | + | chr1_2:24564464-24564483 | None:intergenic | 25.0% |
| !!! | AAAACATTTGTTGTATTGTC+AGG | + | chr1_2:24564465-24564484 | None:intergenic | 25.0% |
| AGTAGTAGTAGTATTATTGG+GGG | + | chr1_2:24561418-24561437 | None:intergenic | 30.0% | |
| CAGTAGTAGTAGTATTATTG+GGG | + | chr1_2:24561419-24561438 | None:intergenic | 30.0% | |
| CCAGTAGTAGTAGTATTATT+GGG | + | chr1_2:24561420-24561439 | None:intergenic | 30.0% | |
| CAACTGCAACCTTAATATAA+GGG | + | chr1_2:24561999-24562018 | None:intergenic | 30.0% | |
| ACAACTGCAACCTTAATATA+AGG | + | chr1_2:24562000-24562019 | None:intergenic | 30.0% | |
| TTATATTAAGGTTGCAGTTG+TGG | - | chr1_2:24561999-24562018 | Msa0063830:intron | 30.0% | |
| TCCGTGCTTCATAATTATAT+TGG | - | chr1_2:24562170-24562189 | Msa0063830:intron | 30.0% | |
| ! | TTAGCTGATGTTGGAATTTT+AGG | - | chr1_2:24562362-24562381 | Msa0063830:intron | 30.0% |
| AACCACAACACAAATTAAGA+CGG | + | chr1_2:24562515-24562534 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGAATTCGGATGTG+AGG | - | chr1_2:24562626-24562645 | Msa0063830:CDS | 30.0% |
| ! | TGTGTTTTGTATTCAATTGC+TGG | - | chr1_2:24562693-24562712 | Msa0063830:CDS | 30.0% |
| AACAAACTAGAAATTGAGCT+AGG | - | chr1_2:24563533-24563552 | Msa0063830:intron | 30.0% | |
| TATTCTCATCTTCAGAAACT+TGG | + | chr1_2:24563568-24563587 | None:intergenic | 30.0% | |
| GGATTATATGGAAACAAAGA+TGG | + | chr1_2:24563605-24563624 | None:intergenic | 30.0% | |
| ! | TGTAGCATTTTCGGATTATA+TGG | + | chr1_2:24563617-24563636 | None:intergenic | 30.0% |
| ATATAATCCGAAAATGCTAC+AGG | - | chr1_2:24563616-24563635 | Msa0063830:intron | 30.0% | |
| !! | TTATGTCGATAGCTTTGTTA+AGG | - | chr1_2:24564153-24564172 | Msa0063830:intron | 30.0% |
| GATATCTGCATGATGTTATT+CGG | - | chr1_2:24564261-24564280 | Msa0063830:intron | 30.0% | |
| ATATCTGCATGATGTTATTC+GGG | - | chr1_2:24564262-24564281 | Msa0063830:intron | 30.0% | |
| TGATAAAGATTTGCGTTTGC+AGG | + | chr1_2:24561319-24561338 | None:intergenic | 35.0% | |
| CCCAATAATACTACTACTAC+TGG | - | chr1_2:24561417-24561436 | Msa0063830:three_prime_UTR | 35.0% | |
| GCCAGTAGTAGTAGTATTAT+TGG | + | chr1_2:24561421-24561440 | None:intergenic | 35.0% | |
| TAAGTTGTGTGAGACTGTTT+AGG | + | chr1_2:24561908-24561927 | None:intergenic | 35.0% | |
| !!! | GGTTTTAGAAGTCTCAAAAG+CGG | + | chr1_2:24561978-24561997 | None:intergenic | 35.0% |
| TTGTGGTTGTTTATGAAGCA+CGG | - | chr1_2:24562016-24562035 | Msa0063830:intron | 35.0% | |
| TTGTTTATGAAGCACGGATA+CGG | - | chr1_2:24562022-24562041 | Msa0063830:intron | 35.0% | |
| GATCTCTAATTCTGAATTCC+TGG | + | chr1_2:24563161-24563180 | None:intergenic | 35.0% | |
| CCATACCTCATTAGTCATTA+CGG | - | chr1_2:24563260-24563279 | Msa0063830:intron | 35.0% | |
| AATGACCGTAATGACTAATG+AGG | + | chr1_2:24563268-24563287 | None:intergenic | 35.0% | |
| CATTAGTCATTACGGTCATT+AGG | - | chr1_2:24563268-24563287 | Msa0063830:intron | 35.0% | |
| ATAAATCTCAGCATAAGTGC+AGG | - | chr1_2:24563462-24563481 | Msa0063830:intron | 35.0% | |
| TAAATCTCAGCATAAGTGCA+GGG | - | chr1_2:24563463-24563482 | Msa0063830:intron | 35.0% | |
| CTGAAGATGAGAATATAGAC+TGG | - | chr1_2:24563573-24563592 | Msa0063830:intron | 35.0% | |
| ! | ATTTGAGATGCACTTCATAC+TGG | - | chr1_2:24563797-24563816 | Msa0063830:intron | 35.0% |
| TATCTGCATGATGTTATTCG+GGG | - | chr1_2:24564263-24564282 | Msa0063830:intron | 35.0% | |
| CTCGATTACTTCAATGAGTT+TGG | + | chr1_2:24564514-24564533 | None:intergenic | 35.0% | |
| TTCTTTCATGCTTTCGATCA+TGG | - | chr1_2:24564632-24564651 | Msa0063830:intron | 35.0% | |
| AATTATGTTGCGCCTAACTT+TGG | + | chr1_2:24564686-24564705 | None:intergenic | 35.0% | |
| !! | CATGTGTAAAAGAGTGTTCA+TGG | + | chr1_2:24564745-24564764 | None:intergenic | 35.0% |
| ! | GATGCTATCCATGATGATGA+TGG | - | chr1_2:24561441-24561460 | Msa0063830:three_prime_UTR | 40.0% |
| CATCAACACCATCATCATCA+TGG | + | chr1_2:24561452-24561471 | None:intergenic | 40.0% | |
| ATGCTCTCTCTTCTCTTCAA+CGG | - | chr1_2:24561514-24561533 | Msa0063830:CDS | 40.0% | |
| TCATGGTATAAGGCTCTGTT+TGG | - | chr1_2:24561636-24561655 | Msa0063830:CDS | 40.0% | |
| CTCACACAACTTATGTCAGT+AGG | - | chr1_2:24561915-24561934 | Msa0063830:intron | 40.0% | |
| CAACTTGGGTCTATTTGGAT+TGG | + | chr1_2:24561955-24561974 | None:intergenic | 40.0% | |
| !! | TGCCGTCTTAATTTGTGTTG+TGG | - | chr1_2:24562510-24562529 | Msa0063830:CDS | 40.0% |
| ! | AAGTTTGCTCACTGCAATGT+TGG | - | chr1_2:24562584-24562603 | Msa0063830:CDS | 40.0% |
| ! | CTGAAGTGTCAGAGATACAT+AGG | + | chr1_2:24562804-24562823 | None:intergenic | 40.0% |
| CTATGTATCTCTGACACTTC+AGG | - | chr1_2:24562802-24562821 | Msa0063830:intron | 40.0% | |
| ! | ACAAAGTGTCAGTGTTGTGT+TGG | + | chr1_2:24562848-24562867 | None:intergenic | 40.0% |
| AACACAACACTGACACTTTG+TGG | - | chr1_2:24562847-24562866 | Msa0063830:intron | 40.0% | |
| ACAGACACTTAACACTGAAC+AGG | + | chr1_2:24562928-24562947 | None:intergenic | 40.0% | |
| GCACTGAAATGCTTGCAAAA+TGG | + | chr1_2:24563066-24563085 | None:intergenic | 40.0% | |
| AGCATTTCAGTGCCTAATCA+TGG | - | chr1_2:24563073-24563092 | Msa0063830:intron | 40.0% | |
| ! | CATGTGGTGCATAAGACTTT+TGG | + | chr1_2:24563125-24563144 | None:intergenic | 40.0% |
| CCGTAATGACTAATGAGGTA+TGG | + | chr1_2:24563263-24563282 | None:intergenic | 40.0% | |
| TGTTGAAATACCTGTCCCTA+AGG | + | chr1_2:24563517-24563536 | None:intergenic | 40.0% | |
| ! | CCATCATCCTGTAGCATTTT+CGG | + | chr1_2:24563626-24563645 | None:intergenic | 40.0% |
| CTGAAATCAGTAAAGCCTCA+TGG | + | chr1_2:24563960-24563979 | None:intergenic | 40.0% | |
| TATCAACCGATGAAGCTGTT+TGG | - | chr1_2:24564036-24564055 | Msa0063830:intron | 40.0% | |
| ATCAACCGATGAAGCTGTTT+GGG | - | chr1_2:24564037-24564056 | Msa0063830:intron | 40.0% | |
| ATGAAGTTGTTCAGCAACTC+AGG | - | chr1_2:24564075-24564094 | Msa0063830:intron | 40.0% | |
| TGAAGTTGTTCAGCAACTCA+GGG | - | chr1_2:24564076-24564095 | Msa0063830:intron | 40.0% | |
| !! | TCGATAGCTTTGTTAAGGTG+TGG | - | chr1_2:24564158-24564177 | Msa0063830:intron | 40.0% |
| ! | AATTATGACCTACTGGCTGA+TGG | - | chr1_2:24564359-24564378 | Msa0063830:intron | 40.0% |
| ! | ATTATGACCTACTGGCTGAT+GGG | - | chr1_2:24564360-24564379 | Msa0063830:intron | 40.0% |
| GATGGGCATAAACACTAATC+TGG | - | chr1_2:24564377-24564396 | Msa0063830:intron | 40.0% | |
| !! | GATCATGGTCTTGTTGATTG+TGG | - | chr1_2:24564647-24564666 | Msa0063830:intron | 40.0% |
| TCATGAACCTCAGTCTGAGA+AGG | + | chr1_2:24561495-24561514 | None:intergenic | 45.0% | |
| AGTCTCAAAAGCGGCAACTT+GGG | + | chr1_2:24561969-24561988 | None:intergenic | 45.0% | |
| AAGTCTCAAAAGCGGCAACT+TGG | + | chr1_2:24561970-24561989 | None:intergenic | 45.0% | |
| TATGAAGCACGGACACTCTT+CGG | + | chr1_2:24562163-24562182 | None:intergenic | 45.0% | |
| AACTCAACGACGCCATGATT+AGG | + | chr1_2:24563088-24563107 | None:intergenic | 45.0% | |
| TGGTAGCTAAGCTCATCATG+TGG | + | chr1_2:24563141-24563160 | None:intergenic | 45.0% | |
| ACATGATGAGCTTAGCTACC+AGG | - | chr1_2:24563140-24563159 | Msa0063830:intron | 45.0% | |
| ! | AGCATAAGTGCAGGGTGTTA+GGG | - | chr1_2:24563471-24563490 | Msa0063830:intron | 45.0% |
| GAAATTGAGCTAGGCAGTCT+TGG | - | chr1_2:24563542-24563561 | Msa0063830:intron | 45.0% | |
| CCGAAAATGCTACAGGATGA+TGG | - | chr1_2:24563623-24563642 | Msa0063830:intron | 45.0% | |
| ATAGACTGCACCTGAACAGA+GGG | + | chr1_2:24563692-24563711 | None:intergenic | 45.0% | |
| AGCTATAGCGCTATGCATAG+CGG | - | chr1_2:24563841-24563860 | Msa0063830:intron | 45.0% | |
| GAAGTTGTTCAGCAACTCAG+GGG | - | chr1_2:24564077-24564096 | Msa0063830:intron | 45.0% | |
| AAGTTGTTCAGCAACTCAGG+GGG | - | chr1_2:24564078-24564097 | Msa0063830:intron | 45.0% | |
| TCTCACGCTCTCTGAATTAG+TGG | - | chr1_2:24564186-24564205 | Msa0063830:intron | 45.0% | |
| GCTCTCTGAATTAGTGGTGA+GGG | - | chr1_2:24564192-24564211 | Msa0063830:intron | 45.0% | |
| TGCATGATGTTATTCGGGGA+AGG | - | chr1_2:24564267-24564286 | Msa0063830:intron | 45.0% | |
| !! | CATGGTCTTGTTGATTGTGG+TGG | - | chr1_2:24564650-24564669 | Msa0063830:intron | 45.0% |
| GGTGCATCGTAACCAAAGTT+AGG | - | chr1_2:24564671-24564690 | Msa0063830:intron | 45.0% | |
| TTTGCGTTTGCAGGTACGTG+TGG | + | chr1_2:24561310-24561329 | None:intergenic | 50.0% | |
| !! | GGTGTTGATGAACCCCTCAT+TGG | - | chr1_2:24561462-24561481 | Msa0063830:three_prime_UTR | 50.0% |
| AGAAGGAGGAGGACCAATGA+GGG | + | chr1_2:24561478-24561497 | None:intergenic | 50.0% | |
| TGAACCTCAGTCTGAGAAGG+AGG | + | chr1_2:24561492-24561511 | None:intergenic | 50.0% | |
| AGCGGCAACTTGGGTCTATT+TGG | + | chr1_2:24561960-24561979 | None:intergenic | 50.0% | |
| ! | TCTTCGGATTAGGCGTGTTC+CGG | + | chr1_2:24562147-24562166 | None:intergenic | 50.0% |
| ! | CAGCATAAGTGCAGGGTGTT+AGG | - | chr1_2:24563470-24563489 | Msa0063830:intron | 50.0% |
| ATACCTGTCCCTAAGGAGCT+CGG | + | chr1_2:24563510-24563529 | None:intergenic | 50.0% | |
| CATAGACTGCACCTGAACAG+AGG | + | chr1_2:24563693-24563712 | None:intergenic | 50.0% | |
| CTCTGTTCAGGTGCAGTCTA+TGG | - | chr1_2:24563691-24563710 | Msa0063830:intron | 50.0% | |
| AACCGATGAAGCTGTTTGGG+AGG | - | chr1_2:24564040-24564059 | Msa0063830:intron | 50.0% | |
| AGCCTCCCAAACAGCTTCAT+CGG | + | chr1_2:24564045-24564064 | None:intergenic | 50.0% | |
| CGCTCTCTGAATTAGTGGTG+AGG | - | chr1_2:24564191-24564210 | Msa0063830:intron | 50.0% | |
| GTTTATGCCCATCAGCCAGT+AGG | + | chr1_2:24564370-24564389 | None:intergenic | 50.0% | |
| GAAGGAGGAGGACCAATGAG+GGG | + | chr1_2:24561477-24561496 | None:intergenic | 55.0% | |
| GAGAAGGAGGAGGACCAATG+AGG | + | chr1_2:24561479-24561498 | None:intergenic | 55.0% | |
| TCCTCCTCCTTCTCAGACTG+AGG | - | chr1_2:24561485-24561504 | Msa0063830:exon | 55.0% | |
| ACCTCAGTCTGAGAAGGAGG+AGG | + | chr1_2:24561489-24561508 | None:intergenic | 55.0% | |
| GATTAGGCGTGTTCCGGTGT+CGG | + | chr1_2:24562141-24562160 | None:intergenic | 55.0% | |
| GCACGGACACTCTTCGGATT+AGG | + | chr1_2:24562157-24562176 | None:intergenic | 55.0% | |
| TTCACGTGCCGAGCTCCTTA+GGG | - | chr1_2:24563499-24563518 | Msa0063830:intron | 55.0% | |
| GCAGACTGATCCCTCTGTTC+AGG | - | chr1_2:24563679-24563698 | Msa0063830:intron | 55.0% | |
| CTCAGGGGGTCAATATCTGC+AGG | - | chr1_2:24564092-24564111 | Msa0063830:intron | 55.0% | |
| GGGGGTCAATATCTGCAGGT+TGG | - | chr1_2:24564096-24564115 | Msa0063830:intron | 55.0% | |
| GCACGGATACGGACACGACA+CGG | - | chr1_2:24562033-24562052 | Msa0063830:intron | 60.0% | |
| TGTCGAGTCGTGTCCGACAC+CGG | - | chr1_2:24562125-24562144 | Msa0063830:CDS | 60.0% | |
| CTTCACGTGCCGAGCTCCTT+AGG | - | chr1_2:24563498-24563517 | Msa0063830:intron | 60.0% | |
| AGGAGCTCGGCACGTGAAGC+AGG | + | chr1_2:24563497-24563516 | None:intergenic | 65.0% | |
| GTGCCGAGCTCCTTAGGGAC+AGG | - | chr1_2:24563504-24563523 | Msa0063830:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 24561282 | 24564903 | 24561282 | ID=Msa0063830;Name=Msa0063830 |
| chr1_2 | mRNA | 24561282 | 24564903 | 24561282 | ID=Msa0063830-mRNA-1;Parent=Msa0063830;Name=Msa0063830-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.66|0.5|1|1|1|4|211|307 |
| chr1_2 | exon | 24561282 | 24561770 | 24561282 | ID=Msa0063830-mRNA-1:exon:8777;Parent=Msa0063830-mRNA-1 |
| chr1_2 | exon | 24562072 | 24562165 | 24562072 | ID=Msa0063830-mRNA-1:exon:8776;Parent=Msa0063830-mRNA-1 |
| chr1_2 | exon | 24562485 | 24562811 | 24562485 | ID=Msa0063830-mRNA-1:exon:8775;Parent=Msa0063830-mRNA-1 |
| chr1_2 | exon | 24564679 | 24564903 | 24564679 | ID=Msa0063830-mRNA-1:exon:8774;Parent=Msa0063830-mRNA-1 |
| chr1_2 | CDS | 24564679 | 24564903 | 24564679 | ID=Msa0063830-mRNA-1:cds;Parent=Msa0063830-mRNA-1 |
| chr1_2 | CDS | 24562485 | 24562811 | 24562485 | ID=Msa0063830-mRNA-1:cds;Parent=Msa0063830-mRNA-1 |
| chr1_2 | CDS | 24562072 | 24562165 | 24562072 | ID=Msa0063830-mRNA-1:cds;Parent=Msa0063830-mRNA-1 |
| chr1_2 | CDS | 24561493 | 24561770 | 24561493 | ID=Msa0063830-mRNA-1:cds;Parent=Msa0063830-mRNA-1 |
| chr1_2 | three_prime_UTR | 24561282 | 24561492 | 24561282 | ID=Msa0063830-mRNA-1:three_prime_utr;Parent=Msa0063830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
