AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1074730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1074730 MtrunA17_Chr7g0244891 90.129 233 18 1 1 228 1 233 7.40e-139 388
Msa1074730 MtrunA17_Chr3g0121231 26.984 189 124 4 44 228 62 240 1.08e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1074730 AT3G08740.1 68.559 229 69 3 2 228 9 236 2.69e-111 319
Msa1074730 AT4G26310.1 27.941 204 136 5 29 227 58 255 1.35e-19 84.7
Msa1074730 AT4G26310.2 27.624 181 120 5 29 204 58 232 1.44e-13 68.6

Find 67 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGTTCAATTTGTCTTCA+TGG 0.273598 7_2:-72675691 Msa1074730:CDS
AGATTTGCGGAGAGAGAAAT+AGG 0.307200 7_2:+72678675 None:intergenic
ACCTTAAGCTTGACTGTTAT+AGG 0.325039 7_2:+72674645 None:intergenic
CGATGTGGATCCGGGACTTA+AGG 0.328589 7_2:-72674619 Msa1074730:CDS
AAGCTTAAGAATCATCTTAC+TGG 0.330470 7_2:-72678311 Msa1074730:CDS
GGTTCACCTTGGCGTGTCTT+AGG 0.336234 7_2:-72678458 Msa1074730:intron
TGGACTGCAATTTGCTGTTA+TGG 0.343872 7_2:-72675380 Msa1074730:CDS
CTGAGAAAACGGGGATTAGA+AGG 0.346976 7_2:+72678616 None:intergenic
CCTTAAGCTTGACTGTTATA+GGG 0.349152 7_2:+72674646 None:intergenic
GCACCAGTGTCGAGAGTTGC+TGG 0.378675 7_2:+72674060 None:intergenic
GGTTTCTAGTCTAGAGGATA+AGG 0.406130 7_2:+72678771 None:intergenic
TCAATTTGTCTTCATGGACT+TGG 0.409456 7_2:-72675685 Msa1074730:intron
TAAGGTAGTCGATGTGGATC+CGG 0.417488 7_2:-72674628 Msa1074730:CDS
AGGGGTGCGAATAGGAAAGT+TGG 0.419595 7_2:+72678636 None:intergenic
CCCTATAACAGTCAAGCTTA+AGG 0.429085 7_2:-72674646 Msa1074730:CDS
AAATATAGGCGAGGAAATAC+TGG 0.432665 7_2:-72674013 Msa1074730:CDS
GGTACTAATATCGAAGTTGA+TGG 0.439639 7_2:-72678479 Msa1074730:CDS
ATACTGGTTGATACAAGATC+TGG 0.444124 7_2:-72673997 Msa1074730:CDS
CGTCTGGATGAATCAGAAGT+TGG 0.444955 7_2:-72675432 Msa1074730:CDS
GGATTAGAAGGGGTGCGAAT+AGG 0.455811 7_2:+72678628 None:intergenic
TCTAGTAATGACATTAAAGT+TGG 0.456626 7_2:-72678500 Msa1074730:CDS
GATGTGGATCCGGGACTTAA+GGG 0.461872 7_2:-72674618 Msa1074730:CDS
GACCTTCAGAGCTGGAAGTT+CGG 0.469297 7_2:-72678273 Msa1074730:intron
GTGGGGCTTACTGAGAAAAC+GGG 0.474683 7_2:+72678606 None:intergenic
AGTGGGGCTTACTGAGAAAA+CGG 0.475773 7_2:+72678605 None:intergenic
GTCCCGCTCTTTGTAAATAT+AGG 0.478856 7_2:-72674027 Msa1074730:CDS
AAGGTAGTCGATGTGGATCC+GGG 0.490283 7_2:-72674627 Msa1074730:CDS
GTCTGGATGAATCAGAAGTT+GGG 0.495506 7_2:-72675431 Msa1074730:CDS
CTTCATGTGAAACCTGGAAA+AGG 0.505634 7_2:-72678353 Msa1074730:CDS
CGCCTATATTTACAAAGAGC+GGG 0.509532 7_2:+72674025 None:intergenic
TGCAATTTGCTGTTATGGAA+TGG 0.524366 7_2:-72675375 Msa1074730:CDS
TACATACGAGGAGACTCGTC+TGG 0.525138 7_2:-72675448 Msa1074730:CDS
ATAGGAGAGATTGAGCTTCA+AGG 0.529166 7_2:+72678693 None:intergenic
GGTATGAAGAAGAAGATTTG+CGG 0.536049 7_2:+72678662 None:intergenic
AAAACAAAGTGGCTGAAAGA+AGG 0.539823 7_2:-72675405 Msa1074730:CDS
GAGTTTCTTCATGTGAAACC+TGG 0.542138 7_2:-72678359 Msa1074730:CDS
GTTTCTAGTCTAGAGGATAA+GGG 0.555035 7_2:+72678772 None:intergenic
AAACAGTTCACATATAAAGA+TGG 0.561471 7_2:-72675711 Msa1074730:CDS
TACCGAACTTCCAGCTCTGA+AGG 0.565488 7_2:+72678271 None:intergenic
GTTGAAAAGACCTTCAGAGC+TGG 0.566337 7_2:-72678281 Msa1074730:CDS
CGACAACACAACATGATAGC+GGG 0.571198 7_2:-72678724 Msa1074730:exon
TGAGAAAACGGGGATTAGAA+GGG 0.572553 7_2:+72678617 None:intergenic
AAAGTGGCTGAAAGAAGGAA+TGG 0.581341 7_2:-72675400 Msa1074730:CDS
TCGCCTATATTTACAAAGAG+CGG 0.586804 7_2:+72674024 None:intergenic
GGCATTATTCATCATGATTG+TGG 0.587553 7_2:-72673780 Msa1074730:three_prime_UTR
GCTGTGTCACCCTTAAGTCC+CGG 0.588592 7_2:+72674609 None:intergenic
TACTGGTTGATACAAGATCT+GGG 0.592937 7_2:-72673996 Msa1074730:CDS
TTGATATGAAATCTTAAGCA+CGG 0.595292 7_2:+72673962 None:intergenic
GGTGCGAATAGGAAAGTTGG+AGG 0.597541 7_2:+72678639 None:intergenic
TGCGAATAGGAAAGTTGGAG+GGG 0.600775 7_2:+72678641 None:intergenic
AAGCCAGCAACTCTCGACAC+TGG 0.613570 7_2:-72674063 Msa1074730:CDS
TAACTTTAGTTGCGAAACTG+AGG 0.615321 7_2:-72673810 Msa1074730:three_prime_UTR
GTGCGAATAGGAAAGTTGGA+GGG 0.615958 7_2:+72678640 None:intergenic
ATCATGATGAATAATGCCGC+AGG 0.616116 7_2:+72673785 None:intergenic
TGATGAAGCTGATATAGTCA+AGG 0.622649 7_2:-72675739 Msa1074730:CDS
CAAGCTTAAGGTAGTCGATG+TGG 0.633779 7_2:-72674634 Msa1074730:CDS
TTGCGAAACTGAGGCTCCTG+CGG 0.644437 7_2:-72673801 Msa1074730:three_prime_UTR
GAGAAAACGGGGATTAGAAG+GGG 0.646810 7_2:+72678618 None:intergenic
GTATTACCTAAGACACGCCA+AGG 0.651100 7_2:+72678452 None:intergenic
TCGAAGTTGATGGTTCACCT+TGG 0.655283 7_2:-72678469 Msa1074730:CDS
GAAAAGGTGCTGCATTTGTG+AGG 0.657241 7_2:-72678337 Msa1074730:CDS
CTTAAGGGTGACACAGCCCA+AGG 0.664333 7_2:-72674603 Msa1074730:intron
ACGACAACACAACATGATAG+CGG 0.677593 7_2:-72678725 Msa1074730:exon
GCTCTTTGTAAATATAGGCG+AGG 0.683752 7_2:-72674022 Msa1074730:CDS
AAGTTGGGAACAAAACAAAG+TGG 0.698694 7_2:-72675416 Msa1074730:CDS
ATACTATCAGAGTACATACG+AGG 0.738653 7_2:-72675460 Msa1074730:intron
TGGGGCTTACTGAGAAAACG+GGG 0.761195 7_2:+72678607 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTATTAGATTCTTTT+TGG - chr7_2:72674482-72674501 Msa1074730:intron 10.0%
!!! ATTTTTATTAGATTCTTTTT+GGG - chr7_2:72674483-72674502 Msa1074730:intron 10.0%
!!! ATTTTGAATTAAATTGATTT+AGG - chr7_2:72674712-72674731 Msa1074730:intron 10.0%
!!! TTTTGAATTAAATTGATTTA+GGG - chr7_2:72674713-72674732 Msa1074730:intron 10.0%
!! AATTAGATTATGTATAATTA+AGG + chr7_2:72676840-72676859 None:intergenic 10.0%
!! TAACAAAGTAAAAAATTAAA+GGG + chr7_2:72676994-72677013 None:intergenic 10.0%
!! TTAACAAAGTAAAAAATTAA+AGG + chr7_2:72676995-72677014 None:intergenic 10.0%
!! TTAGTAAAATAAAAAACTAT+GGG + chr7_2:72677389-72677408 None:intergenic 10.0%
!! ATTAGTAAAATAAAAAACTA+TGG + chr7_2:72677390-72677409 None:intergenic 10.0%
!! ATAAATATAAAAGCTAAAAA+AGG - chr7_2:72678114-72678133 Msa1074730:intron 10.0%
!! CTTAGTAGAAAAAAAAAAAA+GGG + chr7_2:72674558-72674577 None:intergenic 15.0%
!! TCTTAGTAGAAAAAAAAAAA+AGG + chr7_2:72674559-72674578 None:intergenic 15.0%
!!! TTACAAAACAGTAATTTTTT+AGG + chr7_2:72676414-72676433 None:intergenic 15.0%
!! TAATAAATTATGAGATGAAA+AGG + chr7_2:72677138-72677157 None:intergenic 15.0%
!! AAATAAAATTACAACAAGAA+CGG + chr7_2:72677692-72677711 None:intergenic 15.0%
!! TTAAACATAAAATTTAAGGA+TGG - chr7_2:72677711-72677730 Msa1074730:intron 15.0%
!!! AATTTTATTTAAGCTTCAAT+AGG + chr7_2:72677766-72677785 None:intergenic 15.0%
!! AAAAGATTTCAGAAAAACTA+GGG + chr7_2:72674239-72674258 None:intergenic 20.0%
!! AAAAAGATTTCAGAAAAACT+AGG + chr7_2:72674240-72674259 None:intergenic 20.0%
!!! ATAGAAAATAATCTTTTTGC+TGG - chr7_2:72674892-72674911 Msa1074730:intron 20.0%
!! TCTAAAAAATTTAGCTATGT+CGG + chr7_2:72675781-72675800 None:intergenic 20.0%
!! TTCAATGTAATTATATGTGT+CGG - chr7_2:72675812-72675831 Msa1074730:intron 20.0%
!! CATCATTTCTTGAAAAATAT+AGG - chr7_2:72675940-72675959 Msa1074730:intron 20.0%
!! ATATAGGATACAATATGTTT+AGG - chr7_2:72675956-72675975 Msa1074730:intron 20.0%
!! CAATTAATAAGTAGGAATAA+GGG - chr7_2:72676093-72676112 Msa1074730:intron 20.0%
!! AAGTAAAAAATTAAAGGGTA+TGG + chr7_2:72676989-72677008 None:intergenic 20.0%
!! ATATTCATTATCATCAATAC+TGG + chr7_2:72677196-72677215 None:intergenic 20.0%
!!! AGTATTGATGATAATGAATA+TGG - chr7_2:72677195-72677214 Msa1074730:intron 20.0%
!!! GTATTGATGATAATGAATAT+GGG - chr7_2:72677196-72677215 Msa1074730:intron 20.0%
!! TGTATTCTTGTAATAGTTAA+TGG - chr7_2:72677565-72677584 Msa1074730:intron 20.0%
!! AAATTAGCAGTATAAGAAAA+TGG + chr7_2:72677907-72677926 None:intergenic 20.0%
!! ACTAAAATGATAAAGTTATC+TGG - chr7_2:72677992-72678011 Msa1074730:intron 20.0%
!! AATTGTGAAATATGCATTTA+GGG + chr7_2:72678029-72678048 None:intergenic 20.0%
!! AAATTGTGAAATATGCATTT+AGG + chr7_2:72678030-72678049 None:intergenic 20.0%
!! TAAATGCATATTTCACAATT+TGG - chr7_2:72678029-72678048 Msa1074730:intron 20.0%
!! AATTTGGCATTAAAAAAACA+AGG - chr7_2:72678045-72678064 Msa1074730:intron 20.0%
!! ATTTGGCATTAAAAAAACAA+GGG - chr7_2:72678046-72678065 Msa1074730:intron 20.0%
! TCTAGTAATGACATTAAAGT+TGG - chr7_2:72673979-72673998 Msa1074730:CDS 25.0%
! ATATTCCTTCTTACAAATCA+TGG + chr7_2:72674405-72674424 None:intergenic 25.0%
! GAATTTACTATGAAATTGCT+TGG - chr7_2:72674425-72674444 Msa1074730:intron 25.0%
!! TGAAGTCAATTTGATGATTA+AGG - chr7_2:72674458-72674477 Msa1074730:intron 25.0%
!!! ATTAGATTCTTTTTGGGAAT+AGG - chr7_2:72674489-72674508 Msa1074730:intron 25.0%
!!! TTAGATTCTTTTTGGGAATA+GGG - chr7_2:72674490-72674509 Msa1074730:intron 25.0%
! CTGGTATTTATATAGCAAAA+AGG + chr7_2:72674809-72674828 None:intergenic 25.0%
!!! TAGTTTTTTACAAAGCAAGA+GGG + chr7_2:72674872-72674891 None:intergenic 25.0%
!!! TTAGTTTTTTACAAAGCAAG+AGG + chr7_2:72674873-72674892 None:intergenic 25.0%
!! AAAATAATCTTTTTGCTGGT+GGG - chr7_2:72674896-72674915 Msa1074730:intron 25.0%
!! TTAGTGAAAATAGAGGTTTT+TGG + chr7_2:72675156-72675175 None:intergenic 25.0%
!! TCATCTTTTAGTGAAAATAG+AGG + chr7_2:72675163-72675182 None:intergenic 25.0%
!! TTAGCAAGCTTTAGTAATAT+AGG - chr7_2:72675359-72675378 Msa1074730:intron 25.0%
!! AATTCTAATTTGTGAATGTG+TGG + chr7_2:72675399-72675418 None:intergenic 25.0%
! CATCATACTTGTATAACAAA+CGG + chr7_2:72675611-72675630 None:intergenic 25.0%
! AAGTGATGAAAGTTTGAATA+TGG - chr7_2:72676031-72676050 Msa1074730:intron 25.0%
! AGTGATGAAAGTTTGAATAT+GGG - chr7_2:72676032-72676051 Msa1074730:intron 25.0%
! GCAATTAATAAGTAGGAATA+AGG - chr7_2:72676092-72676111 Msa1074730:intron 25.0%
! ATTTGTCACAATTAATGAGT+GGG - chr7_2:72676155-72676174 Msa1074730:intron 25.0%
! TTCAACATAAATTATGTACC+TGG - chr7_2:72676188-72676207 Msa1074730:intron 25.0%
! TCAACATAAATTATGTACCT+GGG - chr7_2:72676189-72676208 Msa1074730:intron 25.0%
! TCAAAAAGACAAATTCTTTC+GGG + chr7_2:72676458-72676477 None:intergenic 25.0%
! CTCAAAAAGACAAATTCTTT+CGG + chr7_2:72676459-72676478 None:intergenic 25.0%
!!! AAGAGTTTTTAGTGATGTTA+TGG - chr7_2:72676597-72676616 Msa1074730:intron 25.0%
!! TGTTGCTTCTAATTTCTTAT+TGG - chr7_2:72676666-72676685 Msa1074730:intron 25.0%
! GTTGCTTCTAATTTCTTATT+GGG - chr7_2:72676667-72676686 Msa1074730:intron 25.0%
! AAACAGTTCACATATAAAGA+TGG - chr7_2:72676768-72676787 Msa1074730:intron 25.0%
! AATTGTTGGAATAGAGAATT+TGG + chr7_2:72676952-72676971 None:intergenic 25.0%
! ATTGTTATACGAGTAAATCA+GGG - chr7_2:72677276-72677295 Msa1074730:intron 25.0%
!! AACTATGAATCAATGCTTTT+GGG + chr7_2:72677329-72677348 None:intergenic 25.0%
!! TACTAATCTGAAATGTTGAA+TGG - chr7_2:72677403-72677422 Msa1074730:intron 25.0%
!!! ACAGTTTTATATACATGCTT+TGG - chr7_2:72677427-72677446 Msa1074730:intron 25.0%
!!! CAGTTTTATATACATGCTTT+GGG - chr7_2:72677428-72677447 Msa1074730:intron 25.0%
!!! AGTTTTATATACATGCTTTG+GGG - chr7_2:72677429-72677448 Msa1074730:intron 25.0%
!! ACTTGTCTGTTTATATTTTC+AGG - chr7_2:72677794-72677813 Msa1074730:intron 25.0%
!!! AGGTTTTATCAGCTAATAAT+TGG - chr7_2:72678087-72678106 Msa1074730:intron 25.0%
! TGACATTCAATATATCTAAG+AGG + chr7_2:72678253-72678272 None:intergenic 25.0%
! TTGATATGAAATCTTAAGCA+CGG + chr7_2:72678520-72678539 None:intergenic 25.0%
!!! AATTTTTTTGCAGTCTTCAA+TGG - chr7_2:72678747-72678766 Msa1074730:five_prime_UTR 25.0%
!! AAAAATGGTTTCTAGTCTAG+AGG + chr7_2:72673717-72673736 None:intergenic 30.0%
! GTTTTCTTACTGCAGAAAAA+TGG + chr7_2:72673732-72673751 None:intergenic 30.0%
TTAGTGAAAAGATGAAAGTG+GGG + chr7_2:72673893-72673912 None:intergenic 30.0%
GTTAGTGAAAAGATGAAAGT+GGG + chr7_2:72673894-72673913 None:intergenic 30.0%
GAGATTAGTGGAATTAAGAA+GGG + chr7_2:72673931-72673950 None:intergenic 30.0%
AGAGATTAGTGGAATTAAGA+AGG + chr7_2:72673932-72673951 None:intergenic 30.0%
GAAAACAACAAAGAGATTAG+TGG + chr7_2:72673943-72673962 None:intergenic 30.0%
AAGCTTAAGAATCATCTTAC+TGG - chr7_2:72674168-72674187 Msa1074730:intron 30.0%
! TTCTTTTTACTGTGTTGCAT+TGG - chr7_2:72674258-72674277 Msa1074730:intron 30.0%
GAATGTTAAGAATCTCACAT+CGG - chr7_2:72674297-72674316 Msa1074730:intron 30.0%
AGTCTGACAATGTTTATAAG+TGG - chr7_2:72674329-72674348 Msa1074730:intron 30.0%
GTCTGACAATGTTTATAAGT+GGG - chr7_2:72674330-72674349 Msa1074730:intron 30.0%
!! TAGATTCTTTTTGGGAATAG+GGG - chr7_2:72674491-72674510 Msa1074730:intron 30.0%
GAAAAAACATGATTGAGTGT+CGG - chr7_2:72674581-72674600 Msa1074730:intron 30.0%
! TATTATTCAATTGCGGATTG+TGG - chr7_2:72674604-72674623 Msa1074730:CDS 30.0%
ACACTATAGGATAGCAAAAT+TGG + chr7_2:72674646-72674665 None:intergenic 30.0%
!!! CCTCTCTCAAAGTTTTATTT+AGG + chr7_2:72674760-72674779 None:intergenic 30.0%
! CCTAAATAAAACTTTGAGAG+AGG - chr7_2:72674757-72674776 Msa1074730:intron 30.0%
! AATAAAACTTTGAGAGAGGT+TGG - chr7_2:72674761-72674780 Msa1074730:intron 30.0%
! GAAAATAATCTTTTTGCTGG+TGG - chr7_2:72674895-72674914 Msa1074730:intron 30.0%
AGGTGAAATGGTTTATGTTT+GGG - chr7_2:72674981-72675000 Msa1074730:intron 30.0%
! GTTAATTTTCTGACTCAATG+TGG - chr7_2:72675042-72675061 Msa1074730:intron 30.0%
GACAAGGAAATCTAAATGTT+TGG + chr7_2:72675258-72675277 None:intergenic 30.0%
TGAAAAACGAAGTATAACAC+AGG + chr7_2:72675295-72675314 None:intergenic 30.0%
! TTAGTAATATAGGTGTCACA+TGG - chr7_2:72675369-72675388 Msa1074730:intron 30.0%
TAGAATGGAAACAGATTGTT+GGG - chr7_2:72675550-72675569 Msa1074730:intron 30.0%
AAGTATGATGCAACATAGTT+TGG - chr7_2:72675621-72675640 Msa1074730:intron 30.0%
GTGTACTTGCATTATAGTTT+AGG + chr7_2:72675679-72675698 None:intergenic 30.0%
GATGATATAAATTGCATCTG+TGG - chr7_2:72676070-72676089 Msa1074730:intron 30.0%
ATCTGTGGCAATTAATAAGT+AGG - chr7_2:72676085-72676104 Msa1074730:intron 30.0%
CATTTGTCACAATTAATGAG+TGG - chr7_2:72676154-72676173 Msa1074730:intron 30.0%
!!! CATCTGACTCTTCTTTTTTA+TGG + chr7_2:72676229-72676248 None:intergenic 30.0%
AAAAAGACAAATTCTTTCGG+GGG + chr7_2:72676456-72676475 None:intergenic 30.0%
CAAAAAGACAAATTCTTTCG+GGG + chr7_2:72676457-72676476 None:intergenic 30.0%
! CGAAAGAATTTGTCTTTTTG+AGG - chr7_2:72676457-72676476 Msa1074730:intron 30.0%
ATCTAACTCATTTATGTGAG+TGG - chr7_2:72676573-72676592 Msa1074730:intron 30.0%
AGACAAGATAACAACAGAAA+AGG + chr7_2:72676698-72676717 None:intergenic 30.0%
GTAACTTCTCATTATGATCA+AGG + chr7_2:72676911-72676930 None:intergenic 30.0%
! AGTTACTAGTTAGCCTAATT+AGG - chr7_2:72676925-72676944 Msa1074730:intron 30.0%
TAGAGAATTTGGACCTAATT+AGG + chr7_2:72676941-72676960 None:intergenic 30.0%
ACTGAAAGCAAAAGAATTGT+TGG + chr7_2:72676966-72676985 None:intergenic 30.0%
CCTAGAAAATAAAGGTTTGA+GGG + chr7_2:72677173-72677192 None:intergenic 30.0%
! AATACTGGCCTAGAAAATAA+AGG + chr7_2:72677181-72677200 None:intergenic 30.0%
GATTGTTATACGAGTAAATC+AGG - chr7_2:72677275-72677294 Msa1074730:intron 30.0%
TTGTTATACGAGTAAATCAG+GGG - chr7_2:72677277-72677296 Msa1074730:intron 30.0%
! CAACTATGAATCAATGCTTT+TGG + chr7_2:72677330-72677349 None:intergenic 30.0%
TAAAACACCATTTGGGAAAA+AGG + chr7_2:72677492-72677511 None:intergenic 30.0%
GATACAGCATTAATCACTTA+AGG + chr7_2:72677670-72677689 None:intergenic 30.0%
! GAACTTTTGTGATTCTATAC+AGG + chr7_2:72677964-72677983 None:intergenic 30.0%
ATATTGAATGTCAAGAGAGT+AGG - chr7_2:72678260-72678279 Msa1074730:intron 30.0%
TGTAAATGGAATATGATTGC+AGG - chr7_2:72678383-72678402 Msa1074730:intron 30.0%
ACTGCAAAAAAATTATGACG+AGG + chr7_2:72678741-72678760 None:intergenic 30.0%
!! GTTTCTAGTCTAGAGGATAA+GGG + chr7_2:72673710-72673729 None:intergenic 35.0%
GGTATGAAGAAGAAGATTTG+CGG + chr7_2:72673820-72673839 None:intergenic 35.0%
GGTTAGTGAAAAGATGAAAG+TGG + chr7_2:72673895-72673914 None:intergenic 35.0%
ATTAGTGGAATTAAGAAGGG+TGG + chr7_2:72673928-72673947 None:intergenic 35.0%
GGTACTAATATCGAAGTTGA+TGG - chr7_2:72674000-72674019 Msa1074730:CDS 35.0%
! CATTGGTTACTAGTAGATGA+AGG - chr7_2:72674275-72674294 Msa1074730:intron 35.0%
TTAAGAATCTCACATCGGAT+AGG - chr7_2:72674302-72674321 Msa1074730:intron 35.0%
CCTTCTTACAAATCATGGTT+GGG + chr7_2:72674400-72674419 None:intergenic 35.0%
TCCTTCTTACAAATCATGGT+TGG + chr7_2:72674401-72674420 None:intergenic 35.0%
! GTGTCGGTATTATTCAATTG+CGG - chr7_2:72674597-72674616 Msa1074730:intron 35.0%
TCACCAATGTTGTCAAATAG+CGG + chr7_2:72674676-72674695 None:intergenic 35.0%
AAATACCAGTGTGTGCTTTA+AGG - chr7_2:72674820-72674839 Msa1074730:intron 35.0%
TTTAGTTGCGATTGAGTTTG+AGG - chr7_2:72674961-72674980 Msa1074730:intron 35.0%
GAGGTGAAATGGTTTATGTT+TGG - chr7_2:72674980-72674999 Msa1074730:intron 35.0%
!! TAGAGGTTTTTGGATATCGT+CGG + chr7_2:72675146-72675165 None:intergenic 35.0%
AGGTTTCATTTCATGGTTGA+AGG + chr7_2:72675210-72675229 None:intergenic 35.0%
TGCTACCACCATAAAAAAAG+GGG + chr7_2:72675334-72675353 None:intergenic 35.0%
GTGCTACCACCATAAAAAAA+GGG + chr7_2:72675335-72675354 None:intergenic 35.0%
AGTGCTACCACCATAAAAAA+AGG + chr7_2:72675336-72675355 None:intergenic 35.0%
TTACCTGTTCATATTCACTC+TGG - chr7_2:72675419-72675438 Msa1074730:CDS 35.0%
CATTCTACCTCCACAAATTA+GGG + chr7_2:72675537-72675556 None:intergenic 35.0%
GTAGAATGGAAACAGATTGT+TGG - chr7_2:72675549-72675568 Msa1074730:intron 35.0%
TATGATGCAACATAGTTTGG+AGG - chr7_2:72675624-72675643 Msa1074730:intron 35.0%
CAGATACTATCTATGAAGCA+CGG - chr7_2:72675710-72675729 Msa1074730:CDS 35.0%
GTATAGTATCCTATGAAGCA+CGG + chr7_2:72675902-72675921 None:intergenic 35.0%
! GAAATGATGTGTCGTTGTAT+TGG + chr7_2:72675929-72675948 None:intergenic 35.0%
ATATGGGAGGATAAATGAAC+TGG - chr7_2:72676376-72676395 Msa1074730:intron 35.0%
AAAAGACAAATTCTTTCGGG+GGG + chr7_2:72676455-72676474 None:intergenic 35.0%
TAGCAATCCACAAGAAAACA+GGG + chr7_2:72676548-72676567 None:intergenic 35.0%
TTAGCAATCCACAAGAAAAC+AGG + chr7_2:72676549-72676568 None:intergenic 35.0%
AGCTTCATCAATCTGTCAAA+AGG + chr7_2:72676730-72676749 None:intergenic 35.0%
TGATGAAGCTGATATAGTCA+AGG - chr7_2:72676740-72676759 Msa1074730:intron 35.0%
TGGTGTTCAATTTGTCTTCA+TGG - chr7_2:72676788-72676807 Msa1074730:intron 35.0%
TCAATTTGTCTTCATGGACT+TGG - chr7_2:72676794-72676813 Msa1074730:intron 35.0%
CATTATGATCAAGGACTGAT+AGG + chr7_2:72676902-72676921 None:intergenic 35.0%
ATACTATCAGAGTACATACG+AGG - chr7_2:72677019-72677038 Msa1074730:intron 35.0%
AAGTTGGGAACAAAACAAAG+TGG - chr7_2:72677063-72677082 Msa1074730:intron 35.0%
AAAACAAAGTGGCTGAAAGA+AGG - chr7_2:72677074-72677093 Msa1074730:intron 35.0%
!! TGCAATTTGCTGTTATGGAA+TGG - chr7_2:72677104-72677123 Msa1074730:intron 35.0%
!!! CCCTCAAACCTTTATTTTCT+AGG - chr7_2:72677170-72677189 Msa1074730:intron 35.0%
GCCTAGAAAATAAAGGTTTG+AGG + chr7_2:72677174-72677193 None:intergenic 35.0%
! GAGTATTCCTTTTTCCCAAA+TGG - chr7_2:72677482-72677501 Msa1074730:intron 35.0%
GCACTAGTAAAACACCATTT+GGG + chr7_2:72677499-72677518 None:intergenic 35.0%
AGCACTAGTAAAACACCATT+TGG + chr7_2:72677500-72677519 None:intergenic 35.0%
!! TCAAAGCATTGACAAGTACA+AGG - chr7_2:72677542-72677561 Msa1074730:intron 35.0%
CCTTAAGCTTGACTGTTATA+GGG + chr7_2:72677836-72677855 None:intergenic 35.0%
ACCTTAAGCTTGACTGTTAT+AGG + chr7_2:72677837-72677856 None:intergenic 35.0%
TAAGAAAATGGCATCACCTT+GGG + chr7_2:72677895-72677914 None:intergenic 35.0%
ATAAGAAAATGGCATCACCT+TGG + chr7_2:72677896-72677915 None:intergenic 35.0%
TTTGTGATTCTATACAGGAC+TGG + chr7_2:72677959-72677978 None:intergenic 35.0%
AAGCTAAAAAAGGACAACCT+AGG - chr7_2:72678124-72678143 Msa1074730:intron 35.0%
AGCTAAAAAAGGACAACCTA+GGG - chr7_2:72678125-72678144 Msa1074730:intron 35.0%
CAAGGTAAAGTTACCAACAA+TGG + chr7_2:72678206-72678225 None:intergenic 35.0%
! GGGCAATAAAAAAGCACAAT+AGG + chr7_2:72678334-72678353 None:intergenic 35.0%
CTTGCAGAACTAACTGTAAA+TGG - chr7_2:72678369-72678388 Msa1074730:intron 35.0%
AAATGGAATATGATTGCAGG+TGG - chr7_2:72678386-72678405 Msa1074730:intron 35.0%
TCGCCTATATTTACAAAGAG+CGG + chr7_2:72678458-72678477 None:intergenic 35.0%
AAATATAGGCGAGGAAATAC+TGG - chr7_2:72678466-72678485 Msa1074730:CDS 35.0%
! ATACTGGTTGATACAAGATC+TGG - chr7_2:72678482-72678501 Msa1074730:CDS 35.0%
! TACTGGTTGATACAAGATCT+GGG - chr7_2:72678483-72678502 Msa1074730:CDS 35.0%
TAACTTTAGTTGCGAAACTG+AGG - chr7_2:72678669-72678688 Msa1074730:CDS 35.0%
GGCATTATTCATCATGATTG+TGG - chr7_2:72678699-72678718 Msa1074730:CDS 35.0%
!! GGTTTCTAGTCTAGAGGATA+AGG + chr7_2:72673711-72673730 None:intergenic 40.0%
ACGACAACACAACATGATAG+CGG - chr7_2:72673754-72673773 Msa1074730:three_prime_UTR 40.0%
ATAGGAGAGATTGAGCTTCA+AGG + chr7_2:72673789-72673808 None:intergenic 40.0%
AGATTTGCGGAGAGAGAAAT+AGG + chr7_2:72673807-72673826 None:intergenic 40.0%
TGAGAAAACGGGGATTAGAA+GGG + chr7_2:72673865-72673884 None:intergenic 40.0%
GAGTTTCTTCATGTGAAACC+TGG - chr7_2:72674120-72674139 Msa1074730:intron 40.0%
CTTCATGTGAAACCTGGAAA+AGG - chr7_2:72674126-72674145 Msa1074730:intron 40.0%
!!! AACTCACAAGCCGGTTTTTT+GGG - chr7_2:72674363-72674382 Msa1074730:intron 40.0%
CTAACACAACCCCAAAAAAC+CGG + chr7_2:72674376-72674395 None:intergenic 40.0%
! CCCAACCATGATTTGTAAGA+AGG - chr7_2:72674397-72674416 Msa1074730:intron 40.0%
!! TTTTTGGGAATAGGGGTAGA+GGG - chr7_2:72674498-72674517 Msa1074730:intron 40.0%
! CAATTGCGGATTGTGGAAAA+TGG - chr7_2:72674611-72674630 Msa1074730:CDS 40.0%
TAGCGGCACTAAAACACTAT+AGG + chr7_2:72674659-72674678 None:intergenic 40.0%
CATTGGTGAGCGTTTGATAA+AGG - chr7_2:72674687-72674706 Msa1074730:intron 40.0%
GCAGTAAAAGCCCTTACTTT+AGG + chr7_2:72674922-72674941 None:intergenic 40.0%
! AAAGTAAGGGCTTTTACTGC+TGG - chr7_2:72674922-72674941 Msa1074730:intron 40.0%
! AAGTAAGGGCTTTTACTGCT+GGG - chr7_2:72674923-72674942 Msa1074730:intron 40.0%
! CGATTGAGTTTGAGGTGAAA+TGG - chr7_2:72674969-72674988 Msa1074730:intron 40.0%
!! AGAGGTTTTTGGATATCGTC+GGG + chr7_2:72675145-72675164 None:intergenic 40.0%
GTGTGTCAGGTTTCATTTCA+TGG + chr7_2:72675217-72675236 None:intergenic 40.0%
ATGAAACCTGACACACATTG+AGG - chr7_2:72675221-72675240 Msa1074730:intron 40.0%
! AATTAGCCTCAATGTGTGTC+AGG + chr7_2:72675230-72675249 None:intergenic 40.0%
TGACACACATTGAGGCTAAT+TGG - chr7_2:72675229-72675248 Msa1074730:intron 40.0%
!! TTCGTTTTTCATCTCGCAAC+CGG - chr7_2:72675304-72675323 Msa1074730:intron 40.0%
CCATAAAAAAAGGGGGTTTC+CGG + chr7_2:72675326-72675345 None:intergenic 40.0%
!!! GAAACCCCCTTTTTTTATGG+TGG - chr7_2:72675326-72675345 Msa1074730:intron 40.0%
GCTACCACCATAAAAAAAGG+GGG + chr7_2:72675333-72675352 None:intergenic 40.0%
TCTCCAGAGTGAATATGAAC+AGG + chr7_2:72675425-72675444 None:intergenic 40.0%
TTGCATCATACCTACCTTCA+TGG - chr7_2:72675494-72675513 Msa1074730:intron 40.0%
TGCATCATACCTACCTTCAT+GGG - chr7_2:72675495-72675514 Msa1074730:intron 40.0%
CCATTCTACCTCCACAAATT+AGG + chr7_2:72675538-72675557 None:intergenic 40.0%
! CCTAATTTGTGGAGGTAGAA+TGG - chr7_2:72675535-72675554 Msa1074730:intron 40.0%
CTCACCAGCAAATCTCAATT+AGG + chr7_2:72675576-72675595 None:intergenic 40.0%
!! AATTGAGATTTGCTGGTGAG+TGG - chr7_2:72675576-72675595 Msa1074730:intron 40.0%
CTATCTATGAAGCACGGATA+CGG - chr7_2:72675716-72675735 Msa1074730:CDS 40.0%
ATTTAGCTATGTCGGCGTAT+CGG + chr7_2:72675773-72675792 None:intergenic 40.0%
TAAGGGAATTATGAGCTGAG+TGG - chr7_2:72676110-72676129 Msa1074730:intron 40.0%
AAGGGAATTATGAGCTGAGT+GGG - chr7_2:72676111-72676130 Msa1074730:intron 40.0%
! TGGCTTCACATTTTATTCCC+AGG + chr7_2:72676209-72676228 None:intergenic 40.0%
!! ATGTATTGACTGCATGCCAA+AGG - chr7_2:72676246-72676265 Msa1074730:intron 40.0%
ATACAGCATCAACATGCCTT+TGG + chr7_2:72676265-72676284 None:intergenic 40.0%
AGAACACATCGAGTACGATA+TGG - chr7_2:72676359-72676378 Msa1074730:intron 40.0%
GAACACATCGAGTACGATAT+GGG - chr7_2:72676360-72676379 Msa1074730:intron 40.0%
! AAAACCACCCTGTTTTCTTG+TGG - chr7_2:72676538-72676557 Msa1074730:intron 40.0%
! TTCATGGACTTGGTATCATC+TGG - chr7_2:72676804-72676823 Msa1074730:intron 40.0%
ACTTGGTATCATCTGGAAAC+TGG - chr7_2:72676811-72676830 Msa1074730:intron 40.0%
GTCTGGATGAATCAGAAGTT+GGG - chr7_2:72677048-72677067 Msa1074730:intron 40.0%
AAAGTGGCTGAAAGAAGGAA+TGG - chr7_2:72677079-72677098 Msa1074730:intron 40.0%
!! TGGACTGCAATTTGCTGTTA+TGG - chr7_2:72677099-72677118 Msa1074730:intron 40.0%
CCCTATAACAGTCAAGCTTA+AGG - chr7_2:72677833-72677852 Msa1074730:intron 40.0%
! CAGTGGATTTGTCTCTTTCT+TGG + chr7_2:72678178-72678197 None:intergenic 40.0%
GTTAGACTCTTACAAACGCA+AGG + chr7_2:72678224-72678243 None:intergenic 40.0%
GAATGTCAAGAGAGTAGGAT+CGG - chr7_2:72678265-72678284 Msa1074730:intron 40.0%
GCAAGTGAATGCAAGACAAA+GGG + chr7_2:72678354-72678373 None:intergenic 40.0%
TGCAAGTGAATGCAAGACAA+AGG + chr7_2:72678355-72678374 None:intergenic 40.0%
GTCCCGCTCTTTGTAAATAT+AGG - chr7_2:72678452-72678471 Msa1074730:intron 40.0%
CGCCTATATTTACAAAGAGC+GGG + chr7_2:72678457-72678476 None:intergenic 40.0%
GCTCTTTGTAAATATAGGCG+AGG - chr7_2:72678457-72678476 Msa1074730:intron 40.0%
ATCATGATGAATAATGCCGC+AGG + chr7_2:72678697-72678716 None:intergenic 40.0%
CGACAACACAACATGATAGC+GGG - chr7_2:72673755-72673774 Msa1074730:three_prime_UTR 45.0%
TGCGAATAGGAAAGTTGGAG+GGG + chr7_2:72673841-72673860 None:intergenic 45.0%
GTGCGAATAGGAAAGTTGGA+GGG + chr7_2:72673842-72673861 None:intergenic 45.0%
GAGAAAACGGGGATTAGAAG+GGG + chr7_2:72673864-72673883 None:intergenic 45.0%
CTGAGAAAACGGGGATTAGA+AGG + chr7_2:72673866-72673885 None:intergenic 45.0%
AGTGGGGCTTACTGAGAAAA+CGG + chr7_2:72673877-72673896 None:intergenic 45.0%
AAGAAGGGTGGTTAGAGAAG+AGG + chr7_2:72673916-72673935 None:intergenic 45.0%
!! TCGAAGTTGATGGTTCACCT+TGG - chr7_2:72674010-72674029 Msa1074730:CDS 45.0%
GTATTACCTAAGACACGCCA+AGG + chr7_2:72674030-72674049 None:intergenic 45.0%
! ACAAATGCAGCACCTTTTCC+AGG + chr7_2:72674141-72674160 None:intergenic 45.0%
!! GAAAAGGTGCTGCATTTGTG+AGG - chr7_2:72674142-72674161 Msa1074730:intron 45.0%
GTTGAAAAGACCTTCAGAGC+TGG - chr7_2:72674198-72674217 Msa1074730:intron 45.0%
!! AAAAACCGGCTTGTGAGTTG+AGG + chr7_2:72674362-72674381 None:intergenic 45.0%
!!! CAACTCACAAGCCGGTTTTT+TGG - chr7_2:72674362-72674381 Msa1074730:intron 45.0%
!!! ACTCACAAGCCGGTTTTTTG+GGG - chr7_2:72674364-72674383 Msa1074730:intron 45.0%
!!! CGGTTTTTTGGGGTTGTGTT+AGG - chr7_2:72674374-72674393 Msa1074730:intron 45.0%
!! CTTTTTGGGAATAGGGGTAG+AGG - chr7_2:72674497-72674516 Msa1074730:intron 45.0%
! TTGCGGATTGTGGAAAATGG+AGG - chr7_2:72674614-72674633 Msa1074730:CDS 45.0%
! GTGCCGCTATTTGACAACAT+TGG - chr7_2:72674670-72674689 Msa1074730:intron 45.0%
GGTCACACATGTTAGCGAAA+AGG + chr7_2:72674788-72674807 None:intergenic 45.0%
!! ACCAGTGTGTGCTTTAAGGT+TGG - chr7_2:72674824-72674843 Msa1074730:intron 45.0%
!! CCAGTGTGTGCTTTAAGGTT+GGG - chr7_2:72674825-72674844 Msa1074730:intron 45.0%
GGTCACACATTCTGGCAAAA+AGG + chr7_2:72674851-72674870 None:intergenic 45.0%
ATAGTCAAACTGAGCGCCTA+AGG - chr7_2:72675105-72675124 Msa1074730:intron 45.0%
!! GGCAAAGTGGATTTTGCCTT+AGG + chr7_2:72675124-72675143 None:intergenic 45.0%
GGTTGAACAAGCAACTGACA+AGG + chr7_2:72675274-72675293 None:intergenic 45.0%
!!! CCGGAAACCCCCTTTTTTTA+TGG - chr7_2:72675323-72675342 Msa1074730:intron 45.0%
CTACCTCCACAAATTAGGGT+GGG + chr7_2:72675533-72675552 None:intergenic 45.0%
TCTACCTCCACAAATTAGGG+TGG + chr7_2:72675534-72675553 None:intergenic 45.0%
TGGGCCTAATTGAGATTTGC+TGG - chr7_2:72675569-72675588 Msa1074730:intron 45.0%
ATGAAGCACGGATACGGATA+CGG - chr7_2:72675722-72675741 Msa1074730:CDS 45.0%
!! TATATGTGTCGGTGTCGTAC+CGG - chr7_2:72675823-72675842 Msa1074730:intron 45.0%
ATGTGTTCTGATACGCTGAC+AGG + chr7_2:72676348-72676367 None:intergenic 45.0%
CAATCCACAAGAAAACAGGG+TGG + chr7_2:72676545-72676564 None:intergenic 45.0%
CGTCTGGATGAATCAGAAGT+TGG - chr7_2:72677047-72677066 Msa1074730:intron 45.0%
!! TTGCGTATGCATAGCTTGCT+AGG - chr7_2:72677635-72677654 Msa1074730:intron 45.0%
CAAGCTTAAGGTAGTCGATG+TGG - chr7_2:72677845-72677864 Msa1074730:intron 45.0%
TAAGGTAGTCGATGTGGATC+CGG - chr7_2:72677851-72677870 Msa1074730:intron 45.0%
TGGAATATGATTGCAGGTGG+TGG - chr7_2:72678389-72678408 Msa1074730:intron 45.0%
!!! TTTTTTTTCTATTTTTTAAA+AGG - chr7_2:72676301-72676320 Msa1074730:intron 5.0%
!!! TTTTTTTCTATTTTTTAAAA+GGG - chr7_2:72676302-72676321 Msa1074730:intron 5.0%
!!! TATTTTAAACATAAAATTTA+AGG - chr7_2:72677707-72677726 Msa1074730:intron 5.0%
GGTGCGAATAGGAAAGTTGG+AGG + chr7_2:72673843-72673862 None:intergenic 50.0%
! AGGGGTGCGAATAGGAAAGT+TGG + chr7_2:72673846-72673865 None:intergenic 50.0%
! GGATTAGAAGGGGTGCGAAT+AGG + chr7_2:72673854-72673873 None:intergenic 50.0%
TGGGGCTTACTGAGAAAACG+GGG + chr7_2:72673875-72673894 None:intergenic 50.0%
GTGGGGCTTACTGAGAAAAC+GGG + chr7_2:72673876-72673895 None:intergenic 50.0%
GACCTTCAGAGCTGGAAGTT+CGG - chr7_2:72674206-72674225 Msa1074730:intron 50.0%
! TACCGAACTTCCAGCTCTGA+AGG + chr7_2:72674211-72674230 None:intergenic 50.0%
GCAATCCTCAACTCACAAGC+CGG - chr7_2:72674354-72674373 Msa1074730:intron 50.0%
CCCAACCTTAAAGCACACAC+TGG + chr7_2:72674828-72674847 None:intergenic 50.0%
AGCAAGAGGGTCACACATTC+TGG + chr7_2:72674859-72674878 None:intergenic 50.0%
! TTGCTGGTGGGCCTAAAGTA+AGG - chr7_2:72674908-72674927 Msa1074730:intron 50.0%
! TGCTGGTGGGCCTAAAGTAA+GGG - chr7_2:72674909-72674928 Msa1074730:intron 50.0%
TTGGATATCGTCGGGCAAAG+TGG + chr7_2:72675137-72675156 None:intergenic 50.0%
GGTTGTTTGCCCATGAAGGT+AGG + chr7_2:72675507-72675526 None:intergenic 50.0%
TCCACAAATTAGGGTGGGTC+GGG + chr7_2:72675528-72675547 None:intergenic 50.0%
CTCCACAAATTAGGGTGGGT+CGG + chr7_2:72675529-72675548 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+CGG + chr7_2:72675891-72675910 None:intergenic 50.0%
!! GACAGGCATCGGTGAAGTAT+TGG + chr7_2:72676331-72676350 None:intergenic 50.0%
TCTGATACGCTGACAGGCAT+CGG + chr7_2:72676342-72676361 None:intergenic 50.0%
CACATCGAGTACGATATGGG+AGG - chr7_2:72676363-72676382 Msa1074730:intron 50.0%
GACAAATTCTTTCGGGGGGT+GGG + chr7_2:72676451-72676470 None:intergenic 50.0%
AGACAAATTCTTTCGGGGGG+TGG + chr7_2:72676452-72676471 None:intergenic 50.0%
TACATACGAGGAGACTCGTC+TGG - chr7_2:72677031-72677050 Msa1074730:intron 50.0%
!! ATGCATAGCTTGCTAGGCAC+AGG - chr7_2:72677641-72677660 Msa1074730:intron 50.0%
!! TGCATAGCTTGCTAGGCACA+GGG - chr7_2:72677642-72677661 Msa1074730:intron 50.0%
AAGGTAGTCGATGTGGATCC+GGG - chr7_2:72677852-72677871 Msa1074730:intron 50.0%
GATGTGGATCCGGGACTTAA+GGG - chr7_2:72677861-72677880 Msa1074730:intron 50.0%
TTCTTGGATCCTGCCAAGGT+GGG + chr7_2:72678162-72678181 None:intergenic 50.0%
TTTCTTGGATCCTGCCAAGG+TGG + chr7_2:72678163-72678182 None:intergenic 50.0%
CTCTTTCTTGGATCCTGCCA+AGG + chr7_2:72678166-72678185 None:intergenic 50.0%
GGTTCACCTTGGCGTGTCTT+AGG - chr7_2:72674021-72674040 Msa1074730:CDS 55.0%
! GTCGGGTTGTTTGCCCATGA+AGG + chr7_2:72675511-72675530 None:intergenic 55.0%
ACCCGACCCACCCTAATTTG+TGG - chr7_2:72675524-72675543 Msa1074730:intron 55.0%
! CGACCCACCCTAATTTGTGG+AGG - chr7_2:72675527-72675546 Msa1074730:intron 55.0%
CACGGATACGGATACGGACA+CGG - chr7_2:72675728-72675747 Msa1074730:CDS 55.0%
GTGTCTGACACGGGATGACA+CGG - chr7_2:72675852-72675871 Msa1074730:intron 55.0%
TGTCTGACACGGGATGACAC+GGG - chr7_2:72675853-72675872 Msa1074730:intron 55.0%
!! GAGGAGTGTCCGTGCTTCAT+AGG - chr7_2:72675890-72675909 Msa1074730:intron 55.0%
AATTCTTTCGGGGGGTGGGT+GGG + chr7_2:72676447-72676466 None:intergenic 55.0%
AAATTCTTTCGGGGGGTGGG+TGG + chr7_2:72676448-72676467 None:intergenic 55.0%
CGATGTGGATCCGGGACTTA+AGG - chr7_2:72677860-72677879 Msa1074730:intron 55.0%
GCTGTGTCACCCTTAAGTCC+CGG + chr7_2:72677873-72677892 None:intergenic 55.0%
CTTAAGGGTGACACAGCCCA+AGG - chr7_2:72677876-72677895 Msa1074730:intron 55.0%
GGAGTGCGAATCGTGCGAAT+AGG - chr7_2:72678067-72678086 Msa1074730:intron 55.0%
TCTTGGATCCTGCCAAGGTG+GGG + chr7_2:72678161-72678180 None:intergenic 55.0%
AAGCCAGCAACTCTCGACAC+TGG - chr7_2:72678416-72678435 Msa1074730:intron 55.0%
TTGCGAAACTGAGGCTCCTG+CGG - chr7_2:72678678-72678697 Msa1074730:CDS 55.0%
GACACGGACACGACACGACA+CGG - chr7_2:72675744-72675763 Msa1074730:CDS 60.0%
CCGTGTCAGACACGTGTCAC+CGG + chr7_2:72675845-72675864 None:intergenic 60.0%
CCGGTGACACGTGTCTGACA+CGG - chr7_2:72675842-72675861 Msa1074730:intron 60.0%
CGGTGACACGTGTCTGACAC+GGG - chr7_2:72675843-72675862 Msa1074730:intron 60.0%
ACGGGAACACGCCTTATCCG+AGG - chr7_2:72675871-72675890 Msa1074730:intron 60.0%
GCACGGACACTCCTCGGATA+AGG + chr7_2:72675885-72675904 None:intergenic 60.0%
! GTGGGGGGGCTTTATACCCT+AGG + chr7_2:72678144-72678163 None:intergenic 60.0%
GGTATAAAGCCCCCCCACCT+TGG - chr7_2:72678146-72678165 Msa1074730:intron 60.0%
TTGGATCCTGCCAAGGTGGG+GGG + chr7_2:72678159-72678178 None:intergenic 60.0%
CTTGGATCCTGCCAAGGTGG+GGG + chr7_2:72678160-72678179 None:intergenic 60.0%
! GCACCAGTGTCGAGAGTTGC+TGG + chr7_2:72678422-72678441 None:intergenic 60.0%
TAAAGCCCCCCCACCTTGGC+AGG - chr7_2:72678150-72678169 Msa1074730:intron 65.0%
TGGATCCTGCCAAGGTGGGG+GGG + chr7_2:72678158-72678177 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 72673698 72678803 72673698 ID=Msa1074730;Name=Msa1074730
chr7_2 mRNA 72673698 72678803 72673698 ID=Msa1074730-mRNA-1;Parent=Msa1074730;Name=Msa1074730-mRNA-1;_AED=0.04;_eAED=0.04;_QI=69|1|1|1|1|1|7|277|228
chr7_2 exon 72673698 72674096 72673698 ID=Msa1074730-mRNA-1:exon:16781;Parent=Msa1074730-mRNA-1
chr7_2 exon 72674604 72674685 72674604 ID=Msa1074730-mRNA-1:exon:16780;Parent=Msa1074730-mRNA-1
chr7_2 exon 72675371 72675472 72675371 ID=Msa1074730-mRNA-1:exon:16779;Parent=Msa1074730-mRNA-1
chr7_2 exon 72675686 72675763 72675686 ID=Msa1074730-mRNA-1:exon:16778;Parent=Msa1074730-mRNA-1
chr7_2 exon 72678274 72678380 72678274 ID=Msa1074730-mRNA-1:exon:16777;Parent=Msa1074730-mRNA-1
chr7_2 exon 72678459 72678536 72678459 ID=Msa1074730-mRNA-1:exon:16776;Parent=Msa1074730-mRNA-1
chr7_2 exon 72678617 72678803 72678617 ID=Msa1074730-mRNA-1:exon:16775;Parent=Msa1074730-mRNA-1
chr7_2 five_prime_UTR 72678735 72678803 72678735 ID=Msa1074730-mRNA-1:five_prime_utr;Parent=Msa1074730-mRNA-1
chr7_2 CDS 72678617 72678734 72678617 ID=Msa1074730-mRNA-1:cds;Parent=Msa1074730-mRNA-1
chr7_2 CDS 72678459 72678536 72678459 ID=Msa1074730-mRNA-1:cds;Parent=Msa1074730-mRNA-1
chr7_2 CDS 72678274 72678380 72678274 ID=Msa1074730-mRNA-1:cds;Parent=Msa1074730-mRNA-1
chr7_2 CDS 72675686 72675763 72675686 ID=Msa1074730-mRNA-1:cds;Parent=Msa1074730-mRNA-1
chr7_2 CDS 72675371 72675472 72675371 ID=Msa1074730-mRNA-1:cds;Parent=Msa1074730-mRNA-1
chr7_2 CDS 72674604 72674685 72674604 ID=Msa1074730-mRNA-1:cds;Parent=Msa1074730-mRNA-1
chr7_2 CDS 72673975 72674096 72673975 ID=Msa1074730-mRNA-1:cds;Parent=Msa1074730-mRNA-1
chr7_2 three_prime_UTR 72673698 72673974 72673698 ID=Msa1074730-mRNA-1:three_prime_utr;Parent=Msa1074730-mRNA-1
Gene Sequence

>Msa1074730

ATGATAGCGGGAAGTGCTACCTTGAAGCTCAATCTCTCCTATTTCTCTCTCCGCAAATCTTCTTCTTCATACCCCTCCAACTTTCCTATTCGCACCCCTTCTAATCCCCGTTTTCTCAAGATTTATGCTATTTCTAGTAATGACATTAAAGTTGGTACTAATATCGAAGTTGATGGTTCACCTTGGCGTGTCTTAGAGTTTCTTCATGTGAAACCTGGAAAAGGTGCTGCATTTGTGAGGACTAAGCTTAAGAATCATCTTACTGGAAATACTGTTGAAAAGACCTTCAGAGCTGGAAGTTCGATTGATGAAGCTGATATAGTCAAGGAAACAAAACAGTTCACATATAAAGATGGTGTTCAATTTGTCTTCATGGACTTGAGTACATACGAGGAGACTCGTCTGGATGAATCAGAAGTTGGGAACAAAACAAAGTGGCTGAAAGAAGGAATGGACTGCAATTTGCTGTTATGGAATGGAAAAGTTATTGATGTTGATCTCCCTATAACAGTCAAGCTTAAGGTAGTCGATGTGGATCCGGGACTTAAGGGTGACACAGCCCAAGGTGGTGGATCAAAGCCAGCAACTCTCGACACTGGTGCTATTGTCAATGTCCCGCTCTTTGTAAATATAGGCGAGGAAATACTGGTTGATACAAGATCTGGGCAGTACATGAGCCGTGCTTAA

Protein sequence

>Msa1074730

MIAGSATLKLNLSYFSLRKSSSSYPSNFPIRTPSNPRFLKIYAISSNDIKVGTNIEVDGSPWRVLEFLHVKPGKGAAFVRTKLKNHLTGNTVEKTFRAGSSIDEADIVKETKQFTYKDGVQFVFMDLSTYEETRLDESEVGNKTKWLKEGMDCNLLLWNGKVIDVDLPITVKLKVVDVDPGLKGDTAQGGGSKPATLDTGAIVNVPLFVNIGEEILVDTRSGQYMSRA*