Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1456390 | XP_013450686.1 | 97.740 | 354 | 7 | 1 | 1 | 353 | 1 | 354 | 0.0 | 702 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1456390 | sp|B8E0X6|FMT_DICTD | 33.333 | 327 | 187 | 9 | 26 | 346 | 3 | 304 | 1.90e-49 | 171 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1456390 | A0A072U6C9 | 97.740 | 354 | 7 | 1 | 1 | 353 | 1 | 354 | 0.0 | 702 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001420 | Msa1456390 | 0.811211 | 7.841227e-51 | -8.615850e-47 |
Msa0001510 | Msa1456390 | 0.805107 | 1.566228e-49 | -8.615850e-47 |
Msa0001540 | Msa1456390 | 0.877855 | 4.493922e-69 | -8.615850e-47 |
Msa0002060 | Msa1456390 | 0.807260 | 5.512611e-50 | -8.615850e-47 |
Msa0012460 | Msa1456390 | 0.800149 | 1.650483e-48 | -8.615850e-47 |
Msa0024070 | Msa1456390 | 0.841297 | 5.175376e-58 | -8.615850e-47 |
Msa0025830 | Msa1456390 | 0.815463 | 9.127261e-52 | -8.615850e-47 |
Msa0032350 | Msa1456390 | 0.803050 | 4.194350e-49 | -8.615850e-47 |
Msa0037300 | Msa1456390 | 0.847182 | 1.359183e-59 | -8.615850e-47 |
Msa0046800 | Msa1456390 | 0.835784 | 1.371655e-56 | -8.615850e-47 |
Msa0047400 | Msa1456390 | 0.820471 | 6.741513e-53 | -8.615850e-47 |
Msa0049990 | Msa1456390 | 0.806356 | 8.559977e-50 | -8.615850e-47 |
Msa0056370 | Msa1456390 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
Msa0058970 | Msa1456390 | 0.811319 | 7.430827e-51 | -8.615850e-47 |
Msa0064490 | Msa1456390 | 0.810547 | 1.091593e-50 | -8.615850e-47 |
Msa0073220 | Msa1456390 | 0.824694 | 7.026790e-54 | -8.615850e-47 |
Msa0074910 | Msa1456390 | 0.805082 | 1.584576e-49 | -8.615850e-47 |
Msa0075080 | Msa1456390 | 0.834504 | 2.885614e-56 | -8.615850e-47 |
Msa0076100 | Msa1456390 | 0.806484 | 8.042394e-50 | -8.615850e-47 |
Msa0077910 | Msa1456390 | 0.837637 | 4.621431e-57 | -8.615850e-47 |
Msa0085470 | Msa1456390 | 0.811425 | 7.045380e-51 | -8.615850e-47 |
Msa0091550 | Msa1456390 | 0.800192 | 1.617205e-48 | -8.615850e-47 |
Msa0102290 | Msa1456390 | 0.814833 | 1.259528e-51 | -8.615850e-47 |
Msa0104190 | Msa1456390 | 0.801304 | 9.589939e-49 | -8.615850e-47 |
Msa0109380 | Msa1456390 | 0.822850 | 1.899904e-53 | -8.615850e-47 |
Msa0112290 | Msa1456390 | 0.827866 | 1.234573e-54 | -8.615850e-47 |
Msa0115410 | Msa1456390 | 0.815830 | 7.562321e-52 | -8.615850e-47 |
Msa1349170 | Msa1456390 | 0.802525 | 5.384144e-49 | -8.615850e-47 |
Msa1349720 | Msa1456390 | 0.815596 | 8.524836e-52 | -8.615850e-47 |
Msa1350130 | Msa1456390 | 0.801462 | 8.903728e-49 | -8.615850e-47 |
Msa1356410 | Msa1456390 | 0.813636 | 2.315791e-51 | -8.615850e-47 |
Msa1359950 | Msa1456390 | 0.803763 | 2.985108e-49 | -8.615850e-47 |
Msa1367560 | Msa1456390 | 0.828954 | 6.743799e-55 | -8.615850e-47 |
Msa1372680 | Msa1456390 | 0.814050 | 1.876709e-51 | -8.615850e-47 |
Msa1375120 | Msa1456390 | 0.858668 | 7.032230e-63 | -8.615850e-47 |
Msa1375570 | Msa1456390 | 0.819065 | 1.412195e-52 | -8.615850e-47 |
Msa1375600 | Msa1456390 | 0.874344 | 7.268162e-68 | -8.615850e-47 |
Msa1376560 | Msa1456390 | 0.883493 | 4.283893e-71 | -8.615850e-47 |
Msa1376590 | Msa1456390 | 0.826590 | 2.495044e-54 | -8.615850e-47 |
Msa1376680 | Msa1456390 | 0.857758 | 1.312028e-62 | -8.615850e-47 |
Msa1388010 | Msa1456390 | 0.833123 | 6.388549e-56 | -8.615850e-47 |
Msa1388610 | Msa1456390 | 0.815562 | 8.673697e-52 | -8.615850e-47 |
Msa1390330 | Msa1456390 | 0.801848 | 7.417499e-49 | -8.615850e-47 |
Msa1391430 | Msa1456390 | 0.838871 | 2.222850e-57 | -8.615850e-47 |
Msa1393200 | Msa1456390 | 0.818649 | 1.756086e-52 | -8.615850e-47 |
Msa1393720 | Msa1456390 | 0.811483 | 6.844336e-51 | -8.615850e-47 |
Msa1398740 | Msa1456390 | 0.823001 | 1.751778e-53 | -8.615850e-47 |
Msa1398840 | Msa1456390 | 0.829369 | 5.349815e-55 | -8.615850e-47 |
Msa1400830 | Msa1456390 | 0.848092 | 7.639371e-60 | -8.615850e-47 |
Msa1403590 | Msa1456390 | 0.818019 | 2.439013e-52 | -8.615850e-47 |
Msa1411390 | Msa1456390 | 0.844235 | 8.570888e-59 | -8.615850e-47 |
Msa1411690 | Msa1456390 | 0.851806 | 6.981408e-61 | -8.615850e-47 |
Msa1412750 | Msa1456390 | 0.820906 | 5.353311e-53 | -8.615850e-47 |
Msa1415250 | Msa1456390 | 0.801714 | 7.905351e-49 | -8.615850e-47 |
Msa1418600 | Msa1456390 | 0.813357 | 2.666258e-51 | -8.615850e-47 |
Msa1419760 | Msa1456390 | 0.828543 | 8.482300e-55 | -8.615850e-47 |
Msa1422490 | Msa1456390 | 0.825088 | 5.670954e-54 | -8.615850e-47 |
Msa1424240 | Msa1456390 | 0.809052 | 2.288803e-50 | -8.615850e-47 |
Msa1426880 | Msa1456390 | 0.851574 | 8.121924e-61 | -8.615850e-47 |
Msa1429390 | Msa1456390 | 0.818962 | 1.490667e-52 | -8.615850e-47 |
Msa1437320 | Msa1456390 | 0.828899 | 6.955417e-55 | -8.615850e-47 |
Msa1438380 | Msa1456390 | 0.812838 | 3.465116e-51 | -8.615850e-47 |
Msa1439880 | Msa1456390 | 0.844283 | 8.320922e-59 | -8.615850e-47 |
Msa1443280 | Msa1456390 | 0.811010 | 8.670917e-51 | -8.615850e-47 |
Msa1444750 | Msa1456390 | 0.819814 | 9.531403e-53 | -8.615850e-47 |
Msa1455120 | Msa1456390 | 0.810891 | 9.201384e-51 | -8.615850e-47 |
Msa1455560 | Msa1456390 | 0.879227 | 1.480615e-69 | -8.615850e-47 |
Msa1456390 | Msa1458330 | 0.812405 | 4.310158e-51 | -8.615850e-47 |
Msa1456390 | Msa1460650 | 0.808121 | 3.618115e-50 | -8.615850e-47 |
Msa1456390 | Msa1462700 | 0.807560 | 4.762079e-50 | -8.615850e-47 |
Msa0607070 | Msa1456390 | 0.809352 | 1.974672e-50 | -8.615850e-47 |
Msa0608720 | Msa1456390 | 0.803295 | 3.731891e-49 | -8.615850e-47 |
Msa0619870 | Msa1456390 | 0.857071 | 2.095189e-62 | -8.615850e-47 |
Msa0619960 | Msa1456390 | 0.851050 | 1.142067e-60 | -8.615850e-47 |
Msa0620020 | Msa1456390 | 0.829777 | 4.258381e-55 | -8.615850e-47 |
Msa0620050 | Msa1456390 | 0.870468 | 1.426743e-66 | -8.615850e-47 |
Msa0624700 | Msa1456390 | 0.859970 | 2.860951e-63 | -8.615850e-47 |
Msa0639040 | Msa1456390 | 0.810886 | 9.221335e-51 | -8.615850e-47 |
Msa0645040 | Msa1456390 | 0.827477 | 1.531051e-54 | -8.615850e-47 |
Msa0647460 | Msa1456390 | 0.841415 | 4.819009e-58 | -8.615850e-47 |
Msa0649140 | Msa1456390 | 0.829890 | 3.995532e-55 | -8.615850e-47 |
Msa0651630 | Msa1456390 | 0.810448 | 1.147177e-50 | -8.615850e-47 |
Msa0652360 | Msa1456390 | 0.809065 | 2.274280e-50 | -8.615850e-47 |
Msa0661490 | Msa1456390 | 0.812700 | 3.715763e-51 | -8.615850e-47 |
Msa0681910 | Msa1456390 | 0.808364 | 3.212421e-50 | -8.615850e-47 |
Msa0684520 | Msa1456390 | 0.824724 | 6.912471e-54 | -8.615850e-47 |
Msa0687650 | Msa1456390 | 0.800670 | 1.292794e-48 | -8.615850e-47 |
Msa0687740 | Msa1456390 | 0.810522 | 1.105356e-50 | -8.615850e-47 |
Msa0692480 | Msa1456390 | 0.804871 | 1.754297e-49 | -8.615850e-47 |
Msa0693050 | Msa1456390 | 0.802782 | 4.765330e-49 | -8.615850e-47 |
Msa0693150 | Msa1456390 | 0.812281 | 4.586903e-51 | -8.615850e-47 |
Msa0695470 | Msa1456390 | 0.833714 | 4.550850e-56 | -8.615850e-47 |
Msa0699200 | Msa1456390 | 0.831882 | 1.297415e-55 | -8.615850e-47 |
Msa0705250 | Msa1456390 | 0.846177 | 2.557987e-59 | -8.615850e-47 |
Msa0706300 | Msa1456390 | 0.810807 | 9.591512e-51 | -8.615850e-47 |
Msa0706320 | Msa1456390 | 0.801378 | 9.261421e-49 | -8.615850e-47 |
Msa0706450 | Msa1456390 | 0.834784 | 2.452633e-56 | -8.615850e-47 |
Msa0706490 | Msa1456390 | 0.858029 | 1.090203e-62 | -8.615850e-47 |
Msa0710950 | Msa1456390 | 0.800148 | 1.650940e-48 | -8.615850e-47 |
Msa0720380 | Msa1456390 | 0.831633 | 1.494257e-55 | -8.615850e-47 |
Msa0729130 | Msa1456390 | 0.820009 | 8.601605e-53 | -8.615850e-47 |
Msa0732100 | Msa1456390 | 0.803724 | 3.040506e-49 | -8.615850e-47 |
Msa0742170 | Msa1456390 | 0.828719 | 7.689536e-55 | -8.615850e-47 |
Msa0745010 | Msa1456390 | 0.811219 | 7.812112e-51 | -8.615850e-47 |
Msa0748890 | Msa1456390 | 0.840334 | 9.259155e-58 | -8.615850e-47 |
Msa0749940 | Msa1456390 | 0.815759 | 7.841169e-52 | -8.615850e-47 |
Msa0752290 | Msa1456390 | 0.847219 | 1.328349e-59 | -8.615850e-47 |
Msa0754880 | Msa1456390 | 0.802920 | 4.461478e-49 | -8.615850e-47 |
Msa0762860 | Msa1456390 | 0.817330 | 3.488157e-52 | -8.615850e-47 |
Msa0762900 | Msa1456390 | 0.802565 | 5.281894e-49 | -8.615850e-47 |
Msa0772530 | Msa1456390 | 0.819174 | 1.333674e-52 | -8.615850e-47 |
Msa0773080 | Msa1456390 | 0.834163 | 3.513175e-56 | -8.615850e-47 |
Msa0775970 | Msa1456390 | 0.802646 | 5.083523e-49 | -8.615850e-47 |
Msa0779790 | Msa1456390 | 0.820119 | 8.115547e-53 | -8.615850e-47 |
Msa0790180 | Msa1456390 | 0.818207 | 2.210991e-52 | -8.615850e-47 |
Msa0790380 | Msa1456390 | 0.812537 | 4.032677e-51 | -8.615850e-47 |
Msa0796840 | Msa1456390 | 0.817017 | 4.100410e-52 | -8.615850e-47 |
Msa0823410 | Msa1456390 | 0.836053 | 1.172431e-56 | -8.615850e-47 |
Msa0825960 | Msa1456390 | 0.802172 | 6.364360e-49 | -8.615850e-47 |
Msa0832270 | Msa1456390 | 0.843614 | 1.257010e-58 | -8.615850e-47 |
Msa0833980 | Msa1456390 | 0.817773 | 2.771288e-52 | -8.615850e-47 |
Msa0841570 | Msa1456390 | 0.822694 | 2.065804e-53 | -8.615850e-47 |
Msa0121420 | Msa1456390 | 0.816258 | 6.067818e-52 | -8.615850e-47 |
Msa0122210 | Msa1456390 | 0.823035 | 1.720317e-53 | -8.615850e-47 |
Msa0122930 | Msa1456390 | 0.830278 | 3.213066e-55 | -8.615850e-47 |
Msa0125800 | Msa1456390 | 0.828850 | 7.148466e-55 | -8.615850e-47 |
Msa0131440 | Msa1456390 | 0.826400 | 2.769566e-54 | -8.615850e-47 |
Msa0133390 | Msa1456390 | 0.805303 | 1.424687e-49 | -8.615850e-47 |
Msa0141770 | Msa1456390 | 0.813607 | 2.350031e-51 | -8.615850e-47 |
Msa0144340 | Msa1456390 | 0.804977 | 1.666949e-49 | -8.615850e-47 |
Msa0145590 | Msa1456390 | 0.813127 | 2.995739e-51 | -8.615850e-47 |
Msa0147070 | Msa1456390 | 0.821089 | 4.859581e-53 | -8.615850e-47 |
Msa0149070 | Msa1456390 | 0.805044 | 1.614399e-49 | -8.615850e-47 |
Msa0151790 | Msa1456390 | 0.827608 | 1.424149e-54 | -8.615850e-47 |
Msa0155550 | Msa1456390 | 0.834709 | 2.562392e-56 | -8.615850e-47 |
Msa0164530 | Msa1456390 | 0.853009 | 3.171962e-61 | -8.615850e-47 |
Msa0164540 | Msa1456390 | 0.846388 | 2.241773e-59 | -8.615850e-47 |
Msa0164790 | Msa1456390 | 0.803256 | 3.801275e-49 | -8.615850e-47 |
Msa0166060 | Msa1456390 | 0.814327 | 1.630301e-51 | -8.615850e-47 |
Msa0167570 | Msa1456390 | 0.800394 | 1.471022e-48 | -8.615850e-47 |
Msa0170440 | Msa1456390 | 0.835254 | 1.867318e-56 | -8.615850e-47 |
Msa0175280 | Msa1456390 | 0.812407 | 4.305511e-51 | -8.615850e-47 |
Msa0178020 | Msa1456390 | 0.844027 | 9.745197e-59 | -8.615850e-47 |
Msa0179200 | Msa1456390 | 0.821605 | 3.693447e-53 | -8.615850e-47 |
Msa0181010 | Msa1456390 | 0.825942 | 3.559291e-54 | -8.615850e-47 |
Msa0181380 | Msa1456390 | 0.820661 | 6.096637e-53 | -8.615850e-47 |
Msa0181560 | Msa1456390 | 0.810885 | 9.227126e-51 | -8.615850e-47 |
Msa0182610 | Msa1456390 | 0.834907 | 2.284937e-56 | -8.615850e-47 |
Msa0183650 | Msa1456390 | 0.821841 | 3.258081e-53 | -8.615850e-47 |
Msa0184800 | Msa1456390 | 0.808660 | 2.777512e-50 | -8.615850e-47 |
Msa0184900 | Msa1456390 | 0.803201 | 3.903012e-49 | -8.615850e-47 |
Msa0188670 | Msa1456390 | 0.807057 | 6.085655e-50 | -8.615850e-47 |
Msa0191180 | Msa1456390 | 0.818143 | 2.285968e-52 | -8.615850e-47 |
Msa0193000 | Msa1456390 | 0.820623 | 6.219708e-53 | -8.615850e-47 |
Msa0206890 | Msa1456390 | 0.830271 | 3.226925e-55 | -8.615850e-47 |
Msa0216390 | Msa1456390 | 0.848311 | 6.645408e-60 | -8.615850e-47 |
Msa0217300 | Msa1456390 | 0.810457 | 1.141948e-50 | -8.615850e-47 |
Msa0218730 | Msa1456390 | 0.801378 | 9.264171e-49 | -8.615850e-47 |
Msa0234930 | Msa1456390 | 0.854815 | 9.573753e-62 | -8.615850e-47 |
Msa0236350 | Msa1456390 | 0.805237 | 1.470483e-49 | -8.615850e-47 |
Msa1237750 | Msa1456390 | 0.818620 | 1.782497e-52 | -8.615850e-47 |
Msa1244380 | Msa1456390 | 0.804253 | 2.360985e-49 | -8.615850e-47 |
Msa1244770 | Msa1456390 | 0.812675 | 3.763298e-51 | -8.615850e-47 |
Msa1244940 | Msa1456390 | 0.821587 | 3.729356e-53 | -8.615850e-47 |
Msa1250490 | Msa1456390 | 0.805685 | 1.184915e-49 | -8.615850e-47 |
Msa1250500 | Msa1456390 | 0.849862 | 2.461476e-60 | -8.615850e-47 |
Msa1258940 | Msa1456390 | 0.819025 | 1.442320e-52 | -8.615850e-47 |
Msa1264670 | Msa1456390 | 0.809187 | 2.141606e-50 | -8.615850e-47 |
Msa1267560 | Msa1456390 | 0.862058 | 6.629784e-64 | -8.615850e-47 |
Msa1269550 | Msa1456390 | 0.831443 | 1.664438e-55 | -8.615850e-47 |
Msa1272200 | Msa1456390 | 0.849810 | 2.546414e-60 | -8.615850e-47 |
Msa1279700 | Msa1456390 | 0.803430 | 3.500055e-49 | -8.615850e-47 |
Msa1294940 | Msa1456390 | 0.819576 | 1.079913e-52 | -8.615850e-47 |
Msa1297500 | Msa1456390 | 0.852185 | 5.448015e-61 | -8.615850e-47 |
Msa1297550 | Msa1456390 | 0.818978 | 1.477945e-52 | -8.615850e-47 |
Msa1297560 | Msa1456390 | 0.851936 | 6.412996e-61 | -8.615850e-47 |
Msa1298180 | Msa1456390 | 0.839768 | 1.300369e-57 | -8.615850e-47 |
Msa1302750 | Msa1456390 | 0.806387 | 8.430153e-50 | -8.615850e-47 |
Msa1305650 | Msa1456390 | 0.837394 | 5.334418e-57 | -8.615850e-47 |
Msa1312800 | Msa1456390 | 0.810484 | 1.126323e-50 | -8.615850e-47 |
Msa1312840 | Msa1456390 | 0.804780 | 1.832513e-49 | -8.615850e-47 |
Msa1324940 | Msa1456390 | 0.810144 | 1.333970e-50 | -8.615850e-47 |
Msa1325260 | Msa1456390 | 0.829678 | 4.500452e-55 | -8.615850e-47 |
Msa1325270 | Msa1456390 | 0.806424 | 8.281077e-50 | -8.615850e-47 |
Msa1334690 | Msa1456390 | 0.803005 | 4.285869e-49 | -8.615850e-47 |
Msa0369770 | Msa1456390 | 0.823910 | 1.073749e-53 | -8.615850e-47 |
Msa0371050 | Msa1456390 | 0.812665 | 3.782449e-51 | -8.615850e-47 |
Msa0376760 | Msa1456390 | 0.840357 | 9.132296e-58 | -8.615850e-47 |
Msa0379360 | Msa1456390 | 0.838597 | 2.616698e-57 | -8.615850e-47 |
Msa0379450 | Msa1456390 | 0.852132 | 5.640598e-61 | -8.615850e-47 |
Msa0380270 | Msa1456390 | 0.821399 | 4.122268e-53 | -8.615850e-47 |
Msa0380390 | Msa1456390 | 0.854280 | 1.367734e-61 | -8.615850e-47 |
Msa0380440 | Msa1456390 | 0.867855 | 1.005712e-65 | -8.615850e-47 |
Msa0382050 | Msa1456390 | 0.805532 | 1.275465e-49 | -8.615850e-47 |
Msa0383110 | Msa1456390 | 0.823671 | 1.221719e-53 | -8.615850e-47 |
Msa0384140 | Msa1456390 | 0.802779 | 4.771040e-49 | -8.615850e-47 |
Msa0386310 | Msa1456390 | 0.817587 | 3.051533e-52 | -8.615850e-47 |
Msa0399180 | Msa1456390 | 0.819236 | 1.291401e-52 | -8.615850e-47 |
Msa0401370 | Msa1456390 | 0.818942 | 1.505968e-52 | -8.615850e-47 |
Msa0402630 | Msa1456390 | 0.803102 | 4.091810e-49 | -8.615850e-47 |
Msa0409300 | Msa1456390 | -0.825483 | 4.572999e-54 | -8.615850e-47 |
Msa0412470 | Msa1456390 | 0.840719 | 7.340428e-58 | -8.615850e-47 |
Msa0415050 | Msa1456390 | 0.800992 | 1.111088e-48 | -8.615850e-47 |
Msa0415060 | Msa1456390 | 0.848149 | 7.369040e-60 | -8.615850e-47 |
Msa0415860 | Msa1456390 | 0.830057 | 3.637768e-55 | -8.615850e-47 |
Msa0417140 | Msa1456390 | 0.822623 | 2.145344e-53 | -8.615850e-47 |
Msa0419030 | Msa1456390 | 0.839032 | 2.018859e-57 | -8.615850e-47 |
Msa0420100 | Msa1456390 | 0.803283 | 3.752862e-49 | -8.615850e-47 |
Msa0423820 | Msa1456390 | 0.817736 | 2.824383e-52 | -8.615850e-47 |
Msa0425150 | Msa1456390 | 0.815900 | 7.292901e-52 | -8.615850e-47 |
Msa0426480 | Msa1456390 | 0.820861 | 5.483449e-53 | -8.615850e-47 |
Msa0428870 | Msa1456390 | 0.827116 | 1.868950e-54 | -8.615850e-47 |
Msa0429560 | Msa1456390 | 0.830501 | 2.834309e-55 | -8.615850e-47 |
Msa0431550 | Msa1456390 | 0.837397 | 5.326499e-57 | -8.615850e-47 |
Msa0436310 | Msa1456390 | 0.817396 | 3.369531e-52 | -8.615850e-47 |
Msa0438990 | Msa1456390 | 0.834628 | 2.684823e-56 | -8.615850e-47 |
Msa0444340 | Msa1456390 | 0.815402 | 9.416323e-52 | -8.615850e-47 |
Msa0446480 | Msa1456390 | 0.815069 | 1.116343e-51 | -8.615850e-47 |
Msa0448880 | Msa1456390 | 0.814444 | 1.536114e-51 | -8.615850e-47 |
Msa0455200 | Msa1456390 | 0.823593 | 1.274233e-53 | -8.615850e-47 |
Msa0463980 | Msa1456390 | 0.835730 | 1.415258e-56 | -8.615850e-47 |
Msa0467980 | Msa1456390 | 0.808081 | 3.689346e-50 | -8.615850e-47 |
Msa0471700 | Msa1456390 | 0.839374 | 1.646754e-57 | -8.615850e-47 |
Msa0473010 | Msa1456390 | 0.834162 | 3.514701e-56 | -8.615850e-47 |
Msa0475130 | Msa1456390 | 0.843453 | 1.388087e-58 | -8.615850e-47 |
Msa0476560 | Msa1456390 | 0.841774 | 3.873978e-58 | -8.615850e-47 |
Msa0480040 | Msa1456390 | 0.817832 | 2.687325e-52 | -8.615850e-47 |
Msa0480430 | Msa1456390 | 0.809862 | 1.533836e-50 | -8.615850e-47 |
Msa1013510 | Msa1456390 | 0.815587 | 8.566909e-52 | -8.615850e-47 |
Msa1013560 | Msa1456390 | 0.848321 | 6.602921e-60 | -8.615850e-47 |
Msa1015220 | Msa1456390 | 0.801837 | 7.457361e-49 | -8.615850e-47 |
Msa1022390 | Msa1456390 | 0.819703 | 1.010595e-52 | -8.615850e-47 |
Msa1033120 | Msa1456390 | 0.818508 | 1.889352e-52 | -8.615850e-47 |
Msa1033250 | Msa1456390 | 0.805637 | 1.212502e-49 | -8.615850e-47 |
Msa1035090 | Msa1456390 | 0.819206 | 1.311586e-52 | -8.615850e-47 |
Msa1037380 | Msa1456390 | 0.808675 | 2.756937e-50 | -8.615850e-47 |
Msa1040010 | Msa1456390 | 0.817432 | 3.307305e-52 | -8.615850e-47 |
Msa1052800 | Msa1456390 | 0.825668 | 4.133587e-54 | -8.615850e-47 |
Msa1054620 | Msa1456390 | 0.827820 | 1.266778e-54 | -8.615850e-47 |
Msa1061310 | Msa1456390 | 0.804694 | 1.910673e-49 | -8.615850e-47 |
Msa1072850 | Msa1456390 | 0.812678 | 3.756653e-51 | -8.615850e-47 |
Msa1074730 | Msa1456390 | 0.852465 | 4.536171e-61 | -8.615850e-47 |
Msa1074980 | Msa1456390 | 0.819140 | 1.358089e-52 | -8.615850e-47 |
Msa1083140 | Msa1456390 | 0.803624 | 3.189433e-49 | -8.615850e-47 |
Msa1084150 | Msa1456390 | 0.824399 | 8.245711e-54 | -8.615850e-47 |
Msa0241940 | Msa1456390 | 0.811407 | 7.108796e-51 | -8.615850e-47 |
Msa0247310 | Msa1456390 | 0.825139 | 5.515908e-54 | -8.615850e-47 |
Msa0255100 | Msa1456390 | 0.841570 | 4.385041e-58 | -8.615850e-47 |
Msa0255770 | Msa1456390 | 0.805815 | 1.112315e-49 | -8.615850e-47 |
Msa0256590 | Msa1456390 | 0.846312 | 2.350380e-59 | -8.615850e-47 |
Msa0258410 | Msa1456390 | 0.812507 | 4.094503e-51 | -8.615850e-47 |
Msa0259390 | Msa1456390 | 0.840516 | 8.295000e-58 | -8.615850e-47 |
Msa0266100 | Msa1456390 | 0.813304 | 2.738730e-51 | -8.615850e-47 |
Msa0269790 | Msa1456390 | 0.817632 | 2.981876e-52 | -8.615850e-47 |
Msa0270230 | Msa1456390 | 0.815069 | 1.116638e-51 | -8.615850e-47 |
Msa0273270 | Msa1456390 | 0.853389 | 2.468004e-61 | -8.615850e-47 |
Msa0273550 | Msa1456390 | 0.828524 | 8.570644e-55 | -8.615850e-47 |
Msa0280120 | Msa1456390 | 0.831987 | 1.222078e-55 | -8.615850e-47 |
Msa0280140 | Msa1456390 | 0.802250 | 6.132771e-49 | -8.615850e-47 |
Msa0284980 | Msa1456390 | 0.805231 | 1.475262e-49 | -8.615850e-47 |
Msa0288300 | Msa1456390 | 0.812323 | 4.490993e-51 | -8.615850e-47 |
Msa0288350 | Msa1456390 | 0.832026 | 1.195474e-55 | -8.615850e-47 |
Msa0288360 | Msa1456390 | 0.811942 | 5.438744e-51 | -8.615850e-47 |
Msa0291490 | Msa1456390 | 0.810845 | 9.414180e-51 | -8.615850e-47 |
Msa0294170 | Msa1456390 | 0.852894 | 3.420635e-61 | -8.615850e-47 |
Msa0295730 | Msa1456390 | 0.838648 | 2.537561e-57 | -8.615850e-47 |
Msa0296490 | Msa1456390 | 0.820333 | 7.248474e-53 | -8.615850e-47 |
Msa0304070 | Msa1456390 | 0.804783 | 1.830403e-49 | -8.615850e-47 |
Msa0307820 | Msa1456390 | 0.820434 | 6.872866e-53 | -8.615850e-47 |
Msa0308430 | Msa1456390 | 0.818296 | 2.111226e-52 | -8.615850e-47 |
Msa0311910 | Msa1456390 | 0.808372 | 3.199589e-50 | -8.615850e-47 |
Msa0313550 | Msa1456390 | 0.831641 | 1.487863e-55 | -8.615850e-47 |
Msa0316330 | Msa1456390 | 0.803286 | 3.747333e-49 | -8.615850e-47 |
Msa0334280 | Msa1456390 | 0.820313 | 7.325994e-53 | -8.615850e-47 |
Msa0334780 | Msa1456390 | 0.803518 | 3.354711e-49 | -8.615850e-47 |
Msa0335740 | Msa1456390 | 0.840315 | 9.365007e-58 | -8.615850e-47 |
Msa0340440 | Msa1456390 | 0.808429 | 3.111304e-50 | -8.615850e-47 |
Msa0362840 | Msa1456390 | 0.802561 | 5.291378e-49 | -8.615850e-47 |
Msa1110350 | Msa1456390 | 0.848758 | 4.997088e-60 | -8.615850e-47 |
Msa1118390 | Msa1456390 | 0.830553 | 2.753040e-55 | -8.615850e-47 |
Msa1126310 | Msa1456390 | 0.868986 | 4.341775e-66 | -8.615850e-47 |
Msa1127510 | Msa1456390 | 0.825654 | 4.167468e-54 | -8.615850e-47 |
Msa1128200 | Msa1456390 | 0.829478 | 5.032682e-55 | -8.615850e-47 |
Msa1129540 | Msa1456390 | -0.811581 | 6.517252e-51 | -8.615850e-47 |
Msa1131300 | Msa1456390 | 0.837824 | 4.139277e-57 | -8.615850e-47 |
Msa1132820 | Msa1456390 | 0.814701 | 1.347284e-51 | -8.615850e-47 |
Msa1137610 | Msa1456390 | 0.800605 | 1.332759e-48 | -8.615850e-47 |
Msa1149960 | Msa1456390 | 0.838011 | 3.705488e-57 | -8.615850e-47 |
Msa1154020 | Msa1456390 | 0.850190 | 1.992884e-60 | -8.615850e-47 |
Msa1162470 | Msa1456390 | 0.806590 | 7.641735e-50 | -8.615850e-47 |
Msa1167160 | Msa1456390 | 0.847119 | 1.414576e-59 | -8.615850e-47 |
Msa1171030 | Msa1456390 | 0.808642 | 2.801707e-50 | -8.615850e-47 |
Msa1177300 | Msa1456390 | 0.807605 | 4.657696e-50 | -8.615850e-47 |
Msa1177960 | Msa1456390 | 0.805828 | 1.105754e-49 | -8.615850e-47 |
Msa1181020 | Msa1456390 | 0.839044 | 2.005396e-57 | -8.615850e-47 |
Msa1190670 | Msa1456390 | 0.815249 | 1.018417e-51 | -8.615850e-47 |
Msa1202170 | Msa1456390 | 0.824189 | 9.238033e-54 | -8.615850e-47 |
Msa1206500 | Msa1456390 | 0.843287 | 1.537410e-58 | -8.615850e-47 |
Msa1208630 | Msa1456390 | 0.858044 | 1.078922e-62 | -8.615850e-47 |
Msa1208750 | Msa1456390 | 0.845175 | 4.784329e-59 | -8.615850e-47 |
Msa1214080 | Msa1456390 | 0.833250 | 5.939889e-56 | -8.615850e-47 |
Msa1221580 | Msa1456390 | 0.837341 | 5.503428e-57 | -8.615850e-47 |
Msa1222020 | Msa1456390 | 0.832999 | 6.861573e-56 | -8.615850e-47 |
Msa0485350 | Msa1456390 | 0.810214 | 1.288457e-50 | -8.615850e-47 |
Msa0486200 | Msa1456390 | 0.823287 | 1.502445e-53 | -8.615850e-47 |
Msa0503120 | Msa1456390 | 0.800448 | 1.434554e-48 | -8.615850e-47 |
Msa0503220 | Msa1456390 | -0.841870 | 3.654969e-58 | -8.615850e-47 |
Msa0504740 | Msa1456390 | 0.823738 | 1.178668e-53 | -8.615850e-47 |
Msa0506740 | Msa1456390 | 0.830429 | 2.951086e-55 | -8.615850e-47 |
Msa0509530 | Msa1456390 | 0.825045 | 5.805770e-54 | -8.615850e-47 |
Msa0510540 | Msa1456390 | 0.849457 | 3.194563e-60 | -8.615850e-47 |
Msa0514630 | Msa1456390 | 0.812525 | 4.058325e-51 | -8.615850e-47 |
Msa0515730 | Msa1456390 | 0.858655 | 7.097571e-63 | -8.615850e-47 |
Msa0517190 | Msa1456390 | 0.823713 | 1.194646e-53 | -8.615850e-47 |
Msa0519090 | Msa1456390 | 0.813813 | 2.116562e-51 | -8.615850e-47 |
Msa0519100 | Msa1456390 | 0.800778 | 1.228654e-48 | -8.615850e-47 |
Msa0520450 | Msa1456390 | 0.800144 | 1.654156e-48 | -8.615850e-47 |
Msa0520550 | Msa1456390 | 0.801285 | 9.675718e-49 | -8.615850e-47 |
Msa0524470 | Msa1456390 | 0.830089 | 3.573254e-55 | -8.615850e-47 |
Msa0524570 | Msa1456390 | 0.824826 | 6.540047e-54 | -8.615850e-47 |
Msa0524960 | Msa1456390 | 0.802846 | 4.621992e-49 | -8.615850e-47 |
Msa0527420 | Msa1456390 | 0.807580 | 4.715404e-50 | -8.615850e-47 |
Msa0543010 | Msa1456390 | 0.804661 | 1.941008e-49 | -8.615850e-47 |
Msa0552670 | Msa1456390 | 0.818923 | 1.521361e-52 | -8.615850e-47 |
Msa0555210 | Msa1456390 | 0.821042 | 4.982323e-53 | -8.615850e-47 |
Msa0555940 | Msa1456390 | 0.804690 | 1.914159e-49 | -8.615850e-47 |
Msa0556960 | Msa1456390 | 0.830381 | 3.031988e-55 | -8.615850e-47 |
Msa0572880 | Msa1456390 | 0.827783 | 1.292711e-54 | -8.615850e-47 |
Msa0583180 | Msa1456390 | 0.845821 | 3.197147e-59 | -8.615850e-47 |
Msa0598980 | Msa1456390 | 0.828374 | 9.316553e-55 | -8.615850e-47 |
Msa0842660 | Msa1456390 | 0.810244 | 1.269323e-50 | -8.615850e-47 |
Msa0862300 | Msa1456390 | 0.837131 | 6.229419e-57 | -8.615850e-47 |
Msa0862960 | Msa1456390 | 0.816855 | 4.459655e-52 | -8.615850e-47 |
Msa0866650 | Msa1456390 | 0.841200 | 5.488989e-58 | -8.615850e-47 |
Msa0867340 | Msa1456390 | 0.814085 | 1.843384e-51 | -8.615850e-47 |
Msa0879820 | Msa1456390 | 0.843533 | 1.321966e-58 | -8.615850e-47 |
Msa0893390 | Msa1456390 | 0.814016 | 1.909321e-51 | -8.615850e-47 |
Msa0898720 | Msa1456390 | 0.809267 | 2.059356e-50 | -8.615850e-47 |
Msa0914780 | Msa1456390 | 0.813877 | 2.048539e-51 | -8.615850e-47 |
Msa0933320 | Msa1456390 | 0.808391 | 3.169003e-50 | -8.615850e-47 |
Msa0934800 | Msa1456390 | 0.823516 | 1.328076e-53 | -8.615850e-47 |
Msa0967890 | Msa1456390 | 0.800920 | 1.149131e-48 | -8.615850e-47 |
Msa0967940 | Msa1456390 | 0.815244 | 1.020823e-51 | -8.615850e-47 |
Msa0969050 | Msa1456390 | 0.971912 | 6.472876e-134 | -8.615850e-47 |
Msa0970090 | Msa1456390 | 0.830043 | 3.668019e-55 | -8.615850e-47 |
Msa0971100 | Msa1456390 | 0.801502 | 8.736003e-49 | -8.615850e-47 |
Msa0978540 | Msa1456390 | 0.804245 | 2.369554e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1456390 | MtrunA17_Chr6g0448851 | 97.740 | 354 | 7 | 1 | 1 | 353 | 1 | 354 | 0.0 | 702 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1456390 | AT1G66520.1 | 68.644 | 354 | 110 | 1 | 1 | 353 | 2 | 355 | 0.0 | 509 |
Msa1456390 | AT1G66520.2 | 66.871 | 326 | 107 | 1 | 1 | 325 | 2 | 327 | 9.34e-162 | 456 |
Find 105 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGTCAATGCAGCTGCTTTC+TGG | 0.125708 | tig0037246:-14234 | Msa1456390:CDS |
GTCCTTCATCCAATGTTTAA+TGG | 0.173035 | tig0037246:+13917 | None:intergenic |
TCATGAAGTTTACCTTATTA+TGG | 0.225256 | tig0037246:+15626 | None:intergenic |
CATTGAACTGCACACTTTCA+TGG | 0.232858 | tig0037246:+15454 | None:intergenic |
CAGGATCTAAACTTCTGATT+AGG | 0.275769 | tig0037246:-16614 | Msa1456390:CDS |
CTTATCAGATTTAAAAGCTT+TGG | 0.282909 | tig0037246:-18115 | Msa1456390:CDS |
TTTCTAGATATTCCTCCTTC+TGG | 0.297526 | tig0037246:-18042 | Msa1456390:intron |
TTATGCATTACGGCTGCTTA+TGG | 0.303086 | tig0037246:-18084 | Msa1456390:CDS |
AGGAGGAATATCTAGAAATT+TGG | 0.308117 | tig0037246:+18047 | None:intergenic |
ATCGTTAATTGGCGAGTATA+CGG | 0.308442 | tig0037246:-18671 | Msa1456390:five_prime_UTR |
AGCATCTGTTCTCCATAATA+AGG | 0.323120 | tig0037246:-15638 | Msa1456390:intron |
AAAGTAAAGTTCTGAAGTTT+TGG | 0.328892 | tig0037246:-13971 | Msa1456390:three_prime_UTR |
TGCTTTCTGGAATGGCCTCC+GGG | 0.329802 | tig0037246:-14221 | Msa1456390:CDS |
TCCAGTTCAAAGAGCATTGC+AGG | 0.331837 | tig0037246:-17528 | Msa1456390:intron |
AAATTATCCTCTAACTGTTC+GGG | 0.338826 | tig0037246:-14144 | Msa1456390:three_prime_UTR |
CTTGAGCTTCTGTTTCATAA+AGG | 0.341200 | tig0037246:-16790 | Msa1456390:intron |
CCGATTGCCCGAACAGTTAG+AGG | 0.350058 | tig0037246:+14137 | None:intergenic |
ATGAGATAAAGTTGGATAAC+TGG | 0.353163 | tig0037246:-18591 | Msa1456390:five_prime_UTR |
TAAATTATCCTCTAACTGTT+CGG | 0.356443 | tig0037246:-14145 | Msa1456390:three_prime_UTR |
TAGGATGGTGTTAAAGAAAC+TGG | 0.357569 | tig0037246:-17392 | Msa1456390:CDS |
CTGCTTTCTGGAATGGCCTC+CGG | 0.360539 | tig0037246:-14222 | Msa1456390:CDS |
TGTAGCCTTTGAATCATCTT+GGG | 0.385996 | tig0037246:+16545 | None:intergenic |
AACAGAAGCTCAAGCAAATC+AGG | 0.393602 | tig0037246:+16799 | None:intergenic |
AGGATCTAAACTTCTGATTA+GGG | 0.393965 | tig0037246:-16613 | Msa1456390:CDS |
GGAACCTCAGTTATGCATTA+CGG | 0.394084 | tig0037246:-18094 | Msa1456390:CDS |
TCAAGTTGATGATCATATAA+AGG | 0.397407 | tig0037246:-17306 | Msa1456390:intron |
CCTCTAACTGTTCGGGCAAT+CGG | 0.397648 | tig0037246:-14137 | Msa1456390:three_prime_UTR |
GTTATGTTGTGTACAGAGTC+AGG | 0.400000 | tig0037246:-18503 | Msa1456390:CDS |
GGATGAAGGACAATAATAGA+TGG | 0.415621 | tig0037246:-13905 | Msa1456390:three_prime_UTR |
ACCTGCAATGCTCTTTGAAC+TGG | 0.416492 | tig0037246:+17527 | None:intergenic |
ATGTAGCCTTTGAATCATCT+TGG | 0.427563 | tig0037246:+16544 | None:intergenic |
GCCTCTTTCAAGAGCAAAGT+TGG | 0.432159 | tig0037246:+18282 | None:intergenic |
CATTGGTGTTTCCATGTGGA+AGG | 0.435021 | tig0037246:-15401 | Msa1456390:CDS |
GCCAACTTTGCTCTTGAAAG+AGG | 0.436963 | tig0037246:-18283 | Msa1456390:CDS |
ATTGAACTGCACACTTTCAT+GGG | 0.441075 | tig0037246:+15455 | None:intergenic |
ATTGTTTCAGTAGCAATGAT+AGG | 0.444349 | tig0037246:+17329 | None:intergenic |
CGATAGATTGGCAAAAGGCT+AGG | 0.448912 | tig0037246:+17560 | None:intergenic |
AAGAAACCCGTTGTTCTGTT+GGG | 0.452053 | tig0037246:-18448 | Msa1456390:CDS |
TCGTTAATTGGCGAGTATAC+GGG | 0.452708 | tig0037246:-18670 | Msa1456390:five_prime_UTR |
ACTGTTCGTGCACTTGATGC+TGG | 0.472791 | tig0037246:-17353 | Msa1456390:CDS |
AATGCAGCTGCTTTCTGGAA+TGG | 0.473723 | tig0037246:-14229 | Msa1456390:CDS |
AAAGATAGCCATGATTCGTC+TGG | 0.475467 | tig0037246:+15670 | None:intergenic |
TTGCCTCTGTCTCTTCTAGC+GGG | 0.476167 | tig0037246:+18328 | None:intergenic |
TGCCATTAAACATTGGATGA+AGG | 0.480128 | tig0037246:-13919 | Msa1456390:three_prime_UTR |
GATGAAGGACAATAATAGAT+GGG | 0.480843 | tig0037246:-13904 | Msa1456390:three_prime_UTR |
AAAACTTTCACTCTCTCCCT+TGG | 0.487513 | tig0037246:-18305 | Msa1456390:CDS |
GGTGCGCCCAACAGAACAAC+GGG | 0.488001 | tig0037246:+18442 | None:intergenic |
GAAGAAACCCGTTGTTCTGT+TGG | 0.494064 | tig0037246:-18449 | Msa1456390:CDS |
GGAGCAGCACCACGATAGAT+TGG | 0.499295 | tig0037246:+17548 | None:intergenic |
AGAATCTTTGCTCTAGATCC+TGG | 0.502056 | tig0037246:+15543 | None:intergenic |
GTATTGGAACTTCAGCTCCC+TGG | 0.503673 | tig0037246:-14265 | Msa1456390:CDS |
TACGAAGAAGTCTAGAACAG+AGG | 0.505666 | tig0037246:-18553 | Msa1456390:five_prime_UTR |
AGGAATATCTAGAAATTTGG+TGG | 0.508162 | tig0037246:+18050 | None:intergenic |
TGCATTTGTCAATGGTGCAT+TGG | 0.510008 | tig0037246:-15418 | Msa1456390:CDS |
AAATGGTCAGAATAAAACTT+TGG | 0.510205 | tig0037246:-15508 | Msa1456390:CDS |
GAAGATCTATGAGATAAAGT+TGG | 0.513725 | tig0037246:-18599 | Msa1456390:five_prime_UTR |
TTCAAGAGCAAAGTTGGCCA+AGG | 0.523928 | tig0037246:+18288 | None:intergenic |
GGTGAGAAAGAAGAATGATT+CGG | 0.528290 | tig0037246:-18528 | Msa1456390:exon |
GATGATATTGCATTTGTCAA+TGG | 0.537633 | tig0037246:-15426 | Msa1456390:CDS |
AGATAGGTCCAGACGAATCA+TGG | 0.540771 | tig0037246:-15678 | Msa1456390:CDS |
AGATGATTCAAAGGCTACAT+TGG | 0.545534 | tig0037246:-16541 | Msa1456390:CDS |
GATAGATTGGCAAAAGGCTA+GGG | 0.546057 | tig0037246:+17561 | None:intergenic |
CACCACGATAGATTGGCAAA+AGG | 0.549477 | tig0037246:+17555 | None:intergenic |
GGGTTTCTTCTTGTTTGTTG+TGG | 0.552904 | tig0037246:+18462 | None:intergenic |
GTGCTGTTTGCTACGTCCGT+AGG | 0.554151 | tig0037246:-13881 | Msa1456390:three_prime_UTR |
TTTGCCTCTGTCTCTTCTAG+CGG | 0.558300 | tig0037246:+18327 | None:intergenic |
TATTTGTTGCCATTAAACAT+TGG | 0.559518 | tig0037246:-13926 | Msa1456390:three_prime_UTR |
ACGAAGAAGTCTAGAACAGA+GGG | 0.559737 | tig0037246:-18552 | Msa1456390:five_prime_UTR |
GACAATAGCAGCAACTTCAA+AGG | 0.572515 | tig0037246:+18360 | None:intergenic |
TTGGTGTTTCCATGTGGAAG+GGG | 0.572569 | tig0037246:-15399 | Msa1456390:CDS |
AAAGGCTACATTGGCACCAA+AGG | 0.579198 | tig0037246:-16532 | Msa1456390:intron |
TGTTGTGGTGAAAGTAGAAG+TGG | 0.580279 | tig0037246:+18477 | None:intergenic |
GGAATATCTAGAAATTTGGT+GGG | 0.580845 | tig0037246:+18051 | None:intergenic |
GTAGCCTTTGAATCATCTTG+GGG | 0.594795 | tig0037246:+16546 | None:intergenic |
TCAGTCCTCACAAACTCCTA+CGG | 0.597750 | tig0037246:+13865 | None:intergenic |
AGAATGTGGAGAAGCAGAAG+CGG | 0.597855 | tig0037246:+18384 | None:intergenic |
TTATGTTGTGTACAGAGTCA+GGG | 0.600743 | tig0037246:-18502 | Msa1456390:CDS |
CCTCTGTCTCTTCTAGCGGG+TGG | 0.601967 | tig0037246:+18331 | None:intergenic |
GTGGCAATTCAAACTTTCAA+CGG | 0.603643 | tig0037246:+18627 | None:intergenic |
GCAACTTCAAAGGAAGAATG+TGG | 0.614138 | tig0037246:+18370 | None:intergenic |
TCAAGAGCAAAGTTGGCCAA+GGG | 0.614517 | tig0037246:+18289 | None:intergenic |
AGATAAAGTTGGATAACTGG+AGG | 0.616731 | tig0037246:-18588 | Msa1456390:five_prime_UTR |
GCTTTCTGGAATGGCCTCCG+GGG | 0.620892 | tig0037246:-14220 | Msa1456390:CDS |
ACAACCCCAAGATGATTCAA+AGG | 0.621667 | tig0037246:-16550 | Msa1456390:CDS |
ATTACATCTCCAGCACGTTG+AGG | 0.625495 | tig0037246:+18235 | None:intergenic |
ATTGGTGTTTCCATGTGGAA+GGG | 0.627647 | tig0037246:-15400 | Msa1456390:CDS |
TACGTCCGTAGGAGTTTGTG+AGG | 0.631350 | tig0037246:-13870 | Msa1456390:three_prime_UTR |
GATAAAGTTGGATAACTGGA+GGG | 0.635358 | tig0037246:-18587 | Msa1456390:five_prime_UTR |
AAGAAGTCTAGAACAGAGGG+AGG | 0.637153 | tig0037246:-18549 | Msa1456390:five_prime_UTR |
AGGTGCGCCCAACAGAACAA+CGG | 0.637246 | tig0037246:+18441 | None:intergenic |
AGTGTGGTTCCCCTTCCACA+TGG | 0.637310 | tig0037246:+15390 | None:intergenic |
ATGAATGACTAACCAGAAGG+AGG | 0.654381 | tig0037246:+18030 | None:intergenic |
AACTACACATACCTCGAGTG+TGG | 0.665523 | tig0037246:+15374 | None:intergenic |
CCACCCGCTAGAAGAGACAG+AGG | 0.670796 | tig0037246:-18331 | Msa1456390:CDS |
GCTGAAGAAAATATGAGCGG+CGG | 0.677292 | tig0037246:-14191 | Msa1456390:exon |
TCTCATAGATCTTCAACACG+TGG | 0.678085 | tig0037246:+18608 | None:intergenic |
TCTTCAGCTTCTGTCCCCGG+AGG | 0.683016 | tig0037246:+14206 | None:intergenic |
TGGAAGGGGAACCACACTCG+AGG | 0.687673 | tig0037246:-15385 | Msa1456390:intron |
ATGAAGGACAATAATAGATG+GGG | 0.688313 | tig0037246:-13903 | Msa1456390:three_prime_UTR |
GGTGCATTGGTGTTTCCATG+TGG | 0.689928 | tig0037246:-15405 | Msa1456390:CDS |
AGGACTATAGTAGACACTTG+AGG | 0.690791 | tig0037246:+18421 | None:intergenic |
GAGAAAGAAGAATGATTCGG+CGG | 0.701222 | tig0037246:-18525 | Msa1456390:exon |
GAAGCTGAAGAAAATATGAG+CGG | 0.725162 | tig0037246:-14194 | Msa1456390:exon |
GCAGCCGTAATGCATAACTG+AGG | 0.749183 | tig0037246:+18090 | None:intergenic |
AAGCGGTGAGAAGTGCATCG+AGG | 0.761991 | tig0037246:+18401 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTCTTATTAATTTATTTGTT+TGG | - | tig0037246:14582-14601 | Msa1456390:intron | 10.0% |
!! | AAAATTCATTAATAAAATCA+CGG | + | tig0037246:15336-15355 | None:intergenic | 10.0% |
!! | AATAAAAAAAATCTTGAAAT+TGG | - | tig0037246:16675-16694 | Msa1456390:intron | 10.0% |
!! | ATAAAAAAAATCTTGAAATT+GGG | - | tig0037246:16676-16695 | Msa1456390:intron | 10.0% |
!! | ATAAAAATATGATTAATATC+CGG | + | tig0037246:18481-18500 | None:intergenic | 10.0% |
!!! | TATTTTATTTAACCATTCAA+TGG | - | tig0037246:14685-14704 | Msa1456390:intron | 15.0% |
!! | GAACTAATAATAATATCAAT+AGG | + | tig0037246:16066-16085 | None:intergenic | 15.0% |
!! | AGTGTTCAAAAAAAAAAAAA+AGG | - | tig0037246:16604-16623 | Msa1456390:CDS | 15.0% |
!! | TAAAAAAAATCTTGAAATTG+GGG | - | tig0037246:16677-16696 | Msa1456390:intron | 15.0% |
!! | TTAGATAATAAGATTGTATT+TGG | + | tig0037246:17559-17578 | None:intergenic | 15.0% |
!! | GTTAATTGCAAAAATAAATT+TGG | - | tig0037246:17715-17734 | Msa1456390:intron | 15.0% |
!!! | TAATGATTTTTAAAAGCAAA+TGG | + | tig0037246:17778-17797 | None:intergenic | 15.0% |
!! | AAACTAATGTAAAATACAAA+TGG | - | tig0037246:18039-18058 | Msa1456390:intron | 15.0% |
!! | ATTTATTTGTTTGGATTGTT+TGG | - | tig0037246:14591-14610 | Msa1456390:intron | 20.0% |
!! | AGTAGTATAAGTAAAACATA+TGG | - | tig0037246:14888-14907 | Msa1456390:intron | 20.0% |
!! | AAAAAAAACAATCTTCAAAC+TGG | - | tig0037246:15364-15383 | Msa1456390:intron | 20.0% |
!!! | TCCAGTTTTTTTTTTTTGAA+GGG | + | tig0037246:15400-15419 | None:intergenic | 20.0% |
!!! | TTCCAGTTTTTTTTTTTTGA+AGG | + | tig0037246:15401-15420 | None:intergenic | 20.0% |
!! | GATTGTCTTAATAATATCTT+AGG | - | tig0037246:15492-15511 | Msa1456390:CDS | 20.0% |
!! | AAAAGATAAATTAACATCCA+TGG | + | tig0037246:15776-15795 | None:intergenic | 20.0% |
!! | AGTAAATATGAAATAGCATT+GGG | + | tig0037246:16118-16137 | None:intergenic | 20.0% |
!! | AAGTAAATATGAAATAGCAT+TGG | + | tig0037246:16119-16138 | None:intergenic | 20.0% |
!!! | GCTATTTCATATTTACTTTT+AGG | - | tig0037246:16121-16140 | Msa1456390:intron | 20.0% |
!! | AACCAAAATGAAAAAGAAAA+TGG | + | tig0037246:17364-17383 | None:intergenic | 20.0% |
!! | TCGGTAAATCTAAAAAATTT+GGG | - | tig0037246:17435-17454 | Msa1456390:intron | 20.0% |
!!! | TTTTTCCTAAAAAATGTTTG+GGG | + | tig0037246:17646-17665 | None:intergenic | 20.0% |
!!! | CTTTTTCCTAAAAAATGTTT+GGG | + | tig0037246:17647-17666 | None:intergenic | 20.0% |
!!! | TCTTTTTCCTAAAAAATGTT+TGG | + | tig0037246:17648-17667 | None:intergenic | 20.0% |
!!! | AAGTACTAATACTATACTTT+TGG | + | tig0037246:17825-17844 | None:intergenic | 20.0% |
!!! | TCAAGTTTTTCATTTTTCTT+CGG | - | tig0037246:18439-18458 | Msa1456390:CDS | 20.0% |
! | CTTATCAGATTTAAAAGCTT+TGG | - | tig0037246:14411-14430 | Msa1456390:intron | 25.0% |
!!! | TTGGTTAATTGATTTGTGTT+TGG | - | tig0037246:14542-14561 | Msa1456390:intron | 25.0% |
! | TTACTTAATTGTCCATTGAA+TGG | + | tig0037246:14700-14719 | None:intergenic | 25.0% |
! | TTGCTTCTCTCTAAATAATT+AGG | - | tig0037246:14798-14817 | Msa1456390:intron | 25.0% |
! | GTATAAGTAAAACATATGGA+TGG | - | tig0037246:14892-14911 | Msa1456390:intron | 25.0% |
!!! | TTGACTTGTATTTGTATACT+AGG | - | tig0037246:15115-15134 | Msa1456390:intron | 25.0% |
!!! | TCAAGTTGATGATCATATAA+AGG | - | tig0037246:15220-15239 | Msa1456390:intron | 25.0% |
! | ACCCTTCAAAAAAAAAAAAC+TGG | - | tig0037246:15396-15415 | Msa1456390:CDS | 25.0% |
!!! | CTCAGAAATAAAAAAGTATC+TGG | + | tig0037246:15537-15556 | None:intergenic | 25.0% |
!!! | GTATCTAAAGATTTGTTAGA+AGG | + | tig0037246:15692-15711 | None:intergenic | 25.0% |
! | CTTTAGATACCTATATATGT+AGG | - | tig0037246:15702-15721 | Msa1456390:intron | 25.0% |
! | CACTAGGATAAAAGATTATA+AGG | + | tig0037246:15804-15823 | None:intergenic | 25.0% |
!! | ATATCTTTATTTGACAAAGC+AGG | - | tig0037246:15893-15912 | Msa1456390:intron | 25.0% |
!!! | TTTTGATTATGTTACTCAGA+AGG | - | tig0037246:16026-16045 | Msa1456390:intron | 25.0% |
! | TTTGATTATGTTACTCAGAA+GGG | - | tig0037246:16027-16046 | Msa1456390:intron | 25.0% |
! | TTTATGAATGATTGTCTCAA+AGG | + | tig0037246:16232-16251 | None:intergenic | 25.0% |
! | AATCATTCATAAACCACATT+TGG | - | tig0037246:16239-16258 | Msa1456390:intron | 25.0% |
! | AAATAAAAGTAAGCCAAATG+TGG | + | tig0037246:16255-16274 | None:intergenic | 25.0% |
!!! | TACAAGTTTTGTTAGGAATA+TGG | + | tig0037246:16284-16303 | None:intergenic | 25.0% |
!!! | TCTCATTTACAAGTTTTGTT+AGG | + | tig0037246:16291-16310 | None:intergenic | 25.0% |
! | ATTATATCGTAATTCATGCT+AGG | - | tig0037246:16364-16383 | Msa1456390:intron | 25.0% |
!!! | CTTTTTTCTTTATAGGAAGT+AGG | + | tig0037246:16416-16435 | None:intergenic | 25.0% |
!!! | ATTTTTTGCTGATAAGAGAA+TGG | - | tig0037246:16578-16597 | Msa1456390:CDS | 25.0% |
!!! | TTTTTTGCTGATAAGAGAAT+GGG | - | tig0037246:16579-16598 | Msa1456390:CDS | 25.0% |
!! | TTTTATTACTCCTCAAAACT+AGG | + | tig0037246:16662-16681 | None:intergenic | 25.0% |
! | GTAGATAACAGGATATAAAA+TGG | + | tig0037246:16733-16752 | None:intergenic | 25.0% |
! | TATATCCTGTTATCTACATA+AGG | - | tig0037246:16736-16755 | Msa1456390:intron | 25.0% |
!! | TTTTTCCTTATGTAGATAAC+AGG | + | tig0037246:16744-16763 | None:intergenic | 25.0% |
! | AATTTATCAACTGTGTATAG+TGG | + | tig0037246:16780-16799 | None:intergenic | 25.0% |
! | GATAAATTATGTTCCTTACA+AGG | - | tig0037246:16792-16811 | Msa1456390:CDS | 25.0% |
! | TCATGAAGTTTACCTTATTA+TGG | + | tig0037246:16903-16922 | None:intergenic | 25.0% |
! | AAATGGTCAGAATAAAACTT+TGG | - | tig0037246:17018-17037 | Msa1456390:intron | 25.0% |
!!! | TGCCATTTTCTTTTTCATTT+TGG | - | tig0037246:17359-17378 | Msa1456390:CDS | 25.0% |
! | GTCGGTAAATCTAAAAAATT+TGG | - | tig0037246:17434-17453 | Msa1456390:intron | 25.0% |
! | TATCAAAAATAGAACCAAAC+AGG | + | tig0037246:17532-17551 | None:intergenic | 25.0% |
! | ATTAACAAGAAACATTCCAT+TGG | + | tig0037246:17701-17720 | None:intergenic | 25.0% |
!! | CAAAAATAAATTTGGTTCCA+AGG | - | tig0037246:17723-17742 | Msa1456390:intron | 25.0% |
! | TCATTGTAAACAGTAATTCT+AGG | - | tig0037246:17799-17818 | Msa1456390:intron | 25.0% |
! | ATGTAAAATACAAATGGTGT+TGG | - | tig0037246:18045-18064 | Msa1456390:CDS | 25.0% |
! | AAATCTGTAATATATCAAGC+AGG | - | tig0037246:18155-18174 | Msa1456390:intron | 25.0% |
! | TAAATTATCCTCTAACTGTT+CGG | - | tig0037246:18381-18400 | Msa1456390:CDS | 25.0% |
!!! | AAAGTAAAGTTCTGAAGTTT+TGG | - | tig0037246:18555-18574 | Msa1456390:five_prime_UTR | 25.0% |
!! | TATTTGTTGCCATTAAACAT+TGG | - | tig0037246:18600-18619 | Msa1456390:five_prime_UTR | 25.0% |
GAAGATCTATGAGATAAAGT+TGG | - | tig0037246:13927-13946 | Msa1456390:three_prime_UTR | 30.0% | |
ATGAGATAAAGTTGGATAAC+TGG | - | tig0037246:13935-13954 | Msa1456390:three_prime_UTR | 30.0% | |
GGAATATCTAGAAATTTGGT+GGG | + | tig0037246:14478-14497 | None:intergenic | 30.0% | |
AGGAATATCTAGAAATTTGG+TGG | + | tig0037246:14479-14498 | None:intergenic | 30.0% | |
AGGAGGAATATCTAGAAATT+TGG | + | tig0037246:14482-14501 | None:intergenic | 30.0% | |
TTTGTGTTTGGATACATTGA+CGG | - | tig0037246:14554-14573 | Msa1456390:intron | 30.0% | |
! | ACTTTATCTGAAATCATCTC+AGG | - | tig0037246:14927-14946 | Msa1456390:intron | 30.0% |
AAATAAGCTAGTGAAACGAA+AGG | + | tig0037246:15076-15095 | None:intergenic | 30.0% | |
CTTGTATTTGTATACTAGGA+TGG | - | tig0037246:15119-15138 | Msa1456390:intron | 30.0% | |
ATTGTTTCAGTAGCAATGAT+AGG | + | tig0037246:15200-15219 | None:intergenic | 30.0% | |
! | TCTGTTTGCTACAAAGTAAA+AGG | - | tig0037246:15260-15279 | Msa1456390:intron | 30.0% |
AAAAACTGGAATGTTTCAAC+TGG | - | tig0037246:15410-15429 | Msa1456390:CDS | 30.0% | |
!! | CTAAAGATTTGTTAGAAGGA+GGG | + | tig0037246:15688-15707 | None:intergenic | 30.0% |
!! | TCTAAAGATTTGTTAGAAGG+AGG | + | tig0037246:15689-15708 | None:intergenic | 30.0% |
CTGAATAAGAAAAGCTCTTA+GGG | + | tig0037246:15830-15849 | None:intergenic | 30.0% | |
TCTGAATAAGAAAAGCTCTT+AGG | + | tig0037246:15831-15850 | None:intergenic | 30.0% | |
AACAATGACTTTCTATCAGA+AGG | + | tig0037246:15861-15880 | None:intergenic | 30.0% | |
AGGATCTAAACTTCTGATTA+GGG | - | tig0037246:15913-15932 | Msa1456390:intron | 30.0% | |
!! | TATTTCTGAAACCATAGTGA+TGG | - | tig0037246:16153-16172 | Msa1456390:intron | 30.0% |
!!! | AAGTTTTGTTAGGAATATGG+AGG | + | tig0037246:16281-16300 | None:intergenic | 30.0% |
!!! | AGTGAGGCTTTTTTCTTTAT+AGG | + | tig0037246:16423-16442 | None:intergenic | 30.0% |
CTCACTGTGCAAAAAATAAA+CGG | - | tig0037246:16437-16456 | Msa1456390:intron | 30.0% | |
CTAATATGTACCTTATTAGG+AGG | + | tig0037246:16486-16505 | None:intergenic | 30.0% | |
CTCCTAATAAGGTACATATT+AGG | - | tig0037246:16484-16503 | Msa1456390:intron | 30.0% | |
CACCTAATATGTACCTTATT+AGG | + | tig0037246:16489-16508 | None:intergenic | 30.0% | |
TAAAATGGAGTGAGCATAAA+AGG | + | tig0037246:16718-16737 | None:intergenic | 30.0% | |
ATTATGTTCCTTACAAGGAA+TGG | - | tig0037246:16797-16816 | Msa1456390:CDS | 30.0% | |
AATAAGATCCATTCCTTGTA+AGG | + | tig0037246:16808-16827 | None:intergenic | 30.0% | |
!! | ACAAGGAATGGATCTTATTT+TGG | - | tig0037246:16809-16828 | Msa1456390:intron | 30.0% |
!!! | TTTTGCTACTTTATGCAGAT+AGG | - | tig0037246:16832-16851 | Msa1456390:intron | 30.0% |
ATTCTTGTAGCTGACAAAAA+TGG | - | tig0037246:17001-17020 | Msa1456390:intron | 30.0% | |
GATGATATTGCATTTGTCAA+TGG | - | tig0037246:17100-17119 | Msa1456390:intron | 30.0% | |
! | TTTTCAGAGTAGTTCTCTTT+CGG | + | tig0037246:17325-17344 | None:intergenic | 30.0% |
CTGAAGAATCTTATCAGTAT+AGG | + | tig0037246:17413-17432 | None:intergenic | 30.0% | |
! | TGCATGAGCTTTGTAAATAA+AGG | - | tig0037246:17952-17971 | Msa1456390:intron | 30.0% |
! | GCATGAGCTTTGTAAATAAA+GGG | - | tig0037246:17953-17972 | Msa1456390:intron | 30.0% |
ATTTAGTGATGTTGTAACTC+AGG | - | tig0037246:18239-18258 | Msa1456390:intron | 30.0% | |
AAATTATCCTCTAACTGTTC+GGG | - | tig0037246:18382-18401 | Msa1456390:CDS | 30.0% | |
!! | CGGTCATTTTAAATGATTTC+CGG | - | tig0037246:18459-18478 | Msa1456390:CDS | 30.0% |
GATGAAGGACAATAATAGAT+GGG | - | tig0037246:18622-18641 | Msa1456390:five_prime_UTR | 30.0% | |
ATGAAGGACAATAATAGATG+GGG | - | tig0037246:18623-18642 | Msa1456390:five_prime_UTR | 30.0% | |
ATCGTTAATTGGCGAGTATA+CGG | - | tig0037246:13855-13874 | Msa1456390:three_prime_UTR | 35.0% | |
GTGGCAATTCAAACTTTCAA+CGG | + | tig0037246:13902-13921 | None:intergenic | 35.0% | |
AGATAAAGTTGGATAACTGG+AGG | - | tig0037246:13938-13957 | Msa1456390:three_prime_UTR | 35.0% | |
GATAAAGTTGGATAACTGGA+GGG | - | tig0037246:13939-13958 | Msa1456390:three_prime_UTR | 35.0% | |
GGTGAGAAAGAAGAATGATT+CGG | - | tig0037246:13998-14017 | Msa1456390:three_prime_UTR | 35.0% | |
TTATGTTGTGTACAGAGTCA+GGG | - | tig0037246:14024-14043 | Msa1456390:three_prime_UTR | 35.0% | |
TCTATTCATTTCTTGCTTGC+AGG | - | tig0037246:14381-14400 | Msa1456390:intron | 35.0% | |
TTTCTAGATATTCCTCCTTC+TGG | - | tig0037246:14484-14503 | Msa1456390:intron | 35.0% | |
TGAATGAATGACTAACCAGA+AGG | + | tig0037246:14502-14521 | None:intergenic | 35.0% | |
! | TCTTCTTATCGCTGTGTTTT+TGG | - | tig0037246:14523-14542 | Msa1456390:intron | 35.0% |
ACACCAATTTGTAGCTTCTA+CGG | + | tig0037246:14770-14789 | None:intergenic | 35.0% | |
AGGTAAAAATGAGTCTTGAG+AGG | - | tig0037246:14818-14837 | Msa1456390:intron | 35.0% | |
ATACTACTAAGCCGATGTTT+GGG | + | tig0037246:14876-14895 | None:intergenic | 35.0% | |
TATACTACTAAGCCGATGTT+TGG | + | tig0037246:14877-14896 | None:intergenic | 35.0% | |
AAGCATACAAACGTTAGAAG+TGG | + | tig0037246:15048-15067 | None:intergenic | 35.0% | |
! | TAGGATGGTGTTAAAGAAAC+TGG | - | tig0037246:15134-15153 | Msa1456390:intron | 35.0% |
TTGCTACAAAGTAAAAGGTC+TGG | - | tig0037246:15265-15284 | Msa1456390:intron | 35.0% | |
TGCTACAAAGTAAAAGGTCT+GGG | - | tig0037246:15266-15285 | Msa1456390:intron | 35.0% | |
TACTGCTGCATATTATGTTG+AGG | - | tig0037246:15456-15475 | Msa1456390:CDS | 35.0% | |
ACTGCTGCATATTATGTTGA+GGG | - | tig0037246:15457-15476 | Msa1456390:CDS | 35.0% | |
AGATCATGTATATGCAAAGC+CGG | - | tig0037246:15555-15574 | Msa1456390:CDS | 35.0% | |
ATGAAAACACACACATACAC+CGG | + | tig0037246:15577-15596 | None:intergenic | 35.0% | |
ATGTTTCACTCGGTCATTAT+AGG | - | tig0037246:15604-15623 | Msa1456390:intron | 35.0% | |
AATCAGGTGCCTACATATAT+AGG | + | tig0037246:15714-15733 | None:intergenic | 35.0% | |
CTTGAGCTTCTGTTTCATAA+AGG | - | tig0037246:15736-15755 | Msa1456390:intron | 35.0% | |
AGGTATGATTATTCTCTCCA+TGG | - | tig0037246:15756-15775 | Msa1456390:intron | 35.0% | |
CAGGATCTAAACTTCTGATT+AGG | - | tig0037246:15912-15931 | Msa1456390:intron | 35.0% | |
!! | GAACTTCCATCCATTTTTGA+TGG | - | tig0037246:15935-15954 | Msa1456390:intron | 35.0% |
TCTAGCTGATCCATCAAAAA+TGG | + | tig0037246:15948-15967 | None:intergenic | 35.0% | |
TGTAGCCTTTGAATCATCTT+GGG | + | tig0037246:15984-16003 | None:intergenic | 35.0% | |
ATGTAGCCTTTGAATCATCT+TGG | + | tig0037246:15985-16004 | None:intergenic | 35.0% | |
AGATGATTCAAAGGCTACAT+TGG | - | tig0037246:15985-16004 | Msa1456390:intron | 35.0% | |
ATCAAAACCAACACTACCTT+TGG | + | tig0037246:16013-16032 | None:intergenic | 35.0% | |
ATTATCGTCATGCAAAGAGA+TGG | + | tig0037246:16202-16221 | None:intergenic | 35.0% | |
GAGATGAAAAGTAGTACATC+AGG | - | tig0037246:16318-16337 | Msa1456390:intron | 35.0% | |
TCTTTATAGGAAGTAGGACT+GGG | + | tig0037246:16410-16429 | None:intergenic | 35.0% | |
TTCTTTATAGGAAGTAGGAC+TGG | + | tig0037246:16411-16430 | None:intergenic | 35.0% | |
!!! | CGTTTATTTTTTGCACAGTG+AGG | + | tig0037246:16439-16458 | None:intergenic | 35.0% |
CTTGAACTTATTGCTTGTGT+TGG | - | tig0037246:16555-16574 | Msa1456390:CDS | 35.0% | |
!!! | AACATTGAGTCCTAGTTTTG+AGG | - | tig0037246:16649-16668 | Msa1456390:intron | 35.0% |
AGCATCTGTTCTCCATAATA+AGG | - | tig0037246:16888-16907 | Msa1456390:intron | 35.0% | |
! | AGCTGTGACACAACAATTTT+AGG | - | tig0037246:16940-16959 | Msa1456390:intron | 35.0% |
!!! | TTTTAGGTTCGTGCATTTTC+AGG | - | tig0037246:16956-16975 | Msa1456390:intron | 35.0% |
!! | TTTAGGTTCGTGCATTTTCA+GGG | - | tig0037246:16957-16976 | Msa1456390:intron | 35.0% |
ATTGAACTGCACACTTTCAT+GGG | + | tig0037246:17074-17093 | None:intergenic | 35.0% | |
TGAAGTTTCAGTTATCACTG+CGG | - | tig0037246:17189-17208 | Msa1456390:intron | 35.0% | |
!! | CTAGAAATTGGCTTGGTATA+CGG | + | tig0037246:17282-17301 | None:intergenic | 35.0% |
! | CATAGATTGGTCCTAGAAAT+TGG | + | tig0037246:17294-17313 | None:intergenic | 35.0% |
!! | TTCTAGGACCAATCTATGTT+AGG | - | tig0037246:17296-17315 | Msa1456390:intron | 35.0% |
TTCGGTTTCCTAACATAGAT+TGG | + | tig0037246:17307-17326 | None:intergenic | 35.0% | |
CTGATAAGATTCTTCAGTGT+CGG | - | tig0037246:17416-17435 | Msa1456390:intron | 35.0% | |
TTGCTCTATTCTGTTCTCTT+TGG | - | tig0037246:17477-17496 | Msa1456390:intron | 35.0% | |
CAAAAGGTAGGCATCTAAAA+TGG | + | tig0037246:17508-17527 | None:intergenic | 35.0% | |
ATAGAACCAAACAGGACAAA+AGG | + | tig0037246:17524-17543 | None:intergenic | 35.0% | |
TCACATACTAACAAGATCCA+TGG | + | tig0037246:17609-17628 | None:intergenic | 35.0% | |
!!! | CTTTGCCCCAAACATTTTTT+AGG | - | tig0037246:17638-17657 | Msa1456390:intron | 35.0% |
AAGATTTCCTTCCAAGTTAG+AGG | - | tig0037246:17664-17683 | Msa1456390:intron | 35.0% | |
CACAGTGATTTCAGTTACAT+TGG | + | tig0037246:17920-17939 | None:intergenic | 35.0% | |
ATCGGAGAAAAGAACAAGAA+GGG | + | tig0037246:17984-18003 | None:intergenic | 35.0% | |
AATCGGAGAAAAGAACAAGA+AGG | + | tig0037246:17985-18004 | None:intergenic | 35.0% | |
TCAATTTCAAGATGTAACCC+AGG | + | tig0037246:18020-18039 | None:intergenic | 35.0% | |
! | AATACAAATGGTGTTGGACA+AGG | - | tig0037246:18051-18070 | Msa1456390:CDS | 35.0% |
AAGTGTGTGCATTCACAATT+TGG | + | tig0037246:18096-18115 | None:intergenic | 35.0% | |
TGATGTTGTAACTCAGGTAT+TGG | - | tig0037246:18245-18264 | Msa1456390:CDS | 35.0% | |
GAAGCTGAAGAAAATATGAG+CGG | - | tig0037246:18332-18351 | Msa1456390:CDS | 35.0% | |
TGCCATTAAACATTGGATGA+AGG | - | tig0037246:18607-18626 | Msa1456390:five_prime_UTR | 35.0% | |
GTCCTTCATCCAATGTTTAA+TGG | + | tig0037246:18612-18631 | None:intergenic | 35.0% | |
GGATGAAGGACAATAATAGA+TGG | - | tig0037246:18621-18640 | Msa1456390:five_prime_UTR | 35.0% | |
TCGTTAATTGGCGAGTATAC+GGG | - | tig0037246:13856-13875 | Msa1456390:three_prime_UTR | 40.0% | |
TCTCATAGATCTTCAACACG+TGG | + | tig0037246:13921-13940 | None:intergenic | 40.0% | |
! | TACGAAGAAGTCTAGAACAG+AGG | - | tig0037246:13973-13992 | Msa1456390:three_prime_UTR | 40.0% |
! | ACGAAGAAGTCTAGAACAGA+GGG | - | tig0037246:13974-13993 | Msa1456390:three_prime_UTR | 40.0% |
! | GAGAAAGAAGAATGATTCGG+CGG | - | tig0037246:14001-14020 | Msa1456390:three_prime_UTR | 40.0% |
GTTATGTTGTGTACAGAGTC+AGG | - | tig0037246:14023-14042 | Msa1456390:three_prime_UTR | 40.0% | |
TGTTGTGGTGAAAGTAGAAG+TGG | + | tig0037246:14052-14071 | None:intergenic | 40.0% | |
! | GGGTTTCTTCTTGTTTGTTG+TGG | + | tig0037246:14067-14086 | None:intergenic | 40.0% |
AAGAAACCCGTTGTTCTGTT+GGG | - | tig0037246:14078-14097 | Msa1456390:three_prime_UTR | 40.0% | |
AGGACTATAGTAGACACTTG+AGG | + | tig0037246:14108-14127 | None:intergenic | 40.0% | |
GCAACTTCAAAGGAAGAATG+TGG | + | tig0037246:14159-14178 | None:intergenic | 40.0% | |
GACAATAGCAGCAACTTCAA+AGG | + | tig0037246:14169-14188 | None:intergenic | 40.0% | |
AAAACTTTCACTCTCTCCCT+TGG | - | tig0037246:14221-14240 | Msa1456390:CDS | 40.0% | |
GGAACCTCAGTTATGCATTA+CGG | - | tig0037246:14432-14451 | Msa1456390:intron | 40.0% | |
TTATGCATTACGGCTGCTTA+TGG | - | tig0037246:14442-14461 | Msa1456390:intron | 40.0% | |
ATGAATGACTAACCAGAAGG+AGG | + | tig0037246:14499-14518 | None:intergenic | 40.0% | |
TTGCCGTAGAAGCTACAAAT+TGG | - | tig0037246:14764-14783 | Msa1456390:intron | 40.0% | |
! | GTGCTTTTGTGGATGCAAAT+TGG | - | tig0037246:14848-14867 | Msa1456390:intron | 40.0% |
GATAGATTGGCAAAAGGCTA+GGG | + | tig0037246:14968-14987 | None:intergenic | 40.0% | |
TGGCATGAGATGAAGGAAAA+CGG | + | tig0037246:15028-15047 | None:intergenic | 40.0% | |
TTAGAAGTGGCATGAGATGA+AGG | + | tig0037246:15035-15054 | None:intergenic | 40.0% | |
GCTACAAAGTAAAAGGTCTG+GGG | - | tig0037246:15267-15286 | Msa1456390:intron | 40.0% | |
CTACAAAGTAAAAGGTCTGG+GGG | - | tig0037246:15268-15287 | Msa1456390:intron | 40.0% | |
AACTGGAATGTTTCAACTGG+TGG | - | tig0037246:15413-15432 | Msa1456390:CDS | 40.0% | |
CATAGCTGTCATGTTTCACT+CGG | - | tig0037246:15594-15613 | Msa1456390:intron | 40.0% | |
AACAGAAGCTCAAGCAAATC+AGG | + | tig0037246:15730-15749 | None:intergenic | 40.0% | |
AAAGCTCTTAGGGTAACACT+AGG | + | tig0037246:15820-15839 | None:intergenic | 40.0% | |
GCTGATCCATCAAAAATGGA+TGG | + | tig0037246:15944-15963 | None:intergenic | 40.0% | |
ACAACCCCAAGATGATTCAA+AGG | - | tig0037246:15976-15995 | Msa1456390:intron | 40.0% | |
GTAGCCTTTGAATCATCTTG+GGG | + | tig0037246:15983-16002 | None:intergenic | 40.0% | |
!! | GCATTTTTGAGCCATCACTA+TGG | + | tig0037246:16167-16186 | None:intergenic | 40.0% |
GATGGCTCAAAAATGCAACA+AGG | - | tig0037246:16171-16190 | Msa1456390:intron | 40.0% | |
TCAGAACACACCTCCTAATA+AGG | - | tig0037246:16473-16492 | Msa1456390:intron | 40.0% | |
TATTAGGTGCAAGAGCTGTA+AGG | - | tig0037246:16500-16519 | Msa1456390:intron | 40.0% | |
AAAGATAGCCATGATTCGTC+TGG | + | tig0037246:16859-16878 | None:intergenic | 40.0% | |
! | AGAATCTTTGCTCTAGATCC+TGG | + | tig0037246:16986-17005 | None:intergenic | 40.0% |
CATTGAACTGCACACTTTCA+TGG | + | tig0037246:17075-17094 | None:intergenic | 40.0% | |
TGCATTTGTCAATGGTGCAT+TGG | - | tig0037246:17108-17127 | Msa1456390:intron | 40.0% | |
! | ATTGGTGTTTCCATGTGGAA+GGG | - | tig0037246:17126-17145 | Msa1456390:intron | 40.0% |
CTACCAGAAAACACTTGTCT+AGG | + | tig0037246:17236-17255 | None:intergenic | 40.0% | |
!! | AGACAAGTGTTTTCTGGTAG+AGG | - | tig0037246:17236-17255 | Msa1456390:intron | 40.0% |
!! | GACAAGTGTTTTCTGGTAGA+GGG | - | tig0037246:17237-17256 | Msa1456390:intron | 40.0% |
CGTATACCAAGCCAATTTCT+AGG | - | tig0037246:17280-17299 | Msa1456390:intron | 40.0% | |
ATTGGTCCTAGAAATTGGCT+TGG | + | tig0037246:17289-17308 | None:intergenic | 40.0% | |
TCAGTATAGGAACAAGCAAG+AGG | + | tig0037246:17400-17419 | None:intergenic | 40.0% | |
AACCAAACAGGACAAAAGGT+AGG | + | tig0037246:17520-17539 | None:intergenic | 40.0% | |
ATTTCCTTCCAAGTTAGAGG+TGG | - | tig0037246:17667-17686 | Msa1456390:intron | 40.0% | |
ATTTCCACCTCTAACTTGGA+AGG | + | tig0037246:17674-17693 | None:intergenic | 40.0% | |
TCTCATTTCCACCTCTAACT+TGG | + | tig0037246:17678-17697 | None:intergenic | 40.0% | |
!! | TAACAGTCAAAAGAGCACCT+TGG | + | tig0037246:17743-17762 | None:intergenic | 40.0% |
! | AAGAAGTCTAGAACAGAGGG+AGG | - | tig0037246:13977-13996 | Msa1456390:three_prime_UTR | 45.0% |
GAAGAAACCCGTTGTTCTGT+TGG | - | tig0037246:14077-14096 | Msa1456390:three_prime_UTR | 45.0% | |
AGAATGTGGAGAAGCAGAAG+CGG | + | tig0037246:14145-14164 | None:intergenic | 45.0% | |
TTTGCCTCTGTCTCTTCTAG+CGG | + | tig0037246:14202-14221 | None:intergenic | 45.0% | |
TCAAGAGCAAAGTTGGCCAA+GGG | + | tig0037246:14240-14259 | None:intergenic | 45.0% | |
TTCAAGAGCAAAGTTGGCCA+AGG | + | tig0037246:14241-14260 | None:intergenic | 45.0% | |
GCCAACTTTGCTCTTGAAAG+AGG | - | tig0037246:14243-14262 | Msa1456390:CDS | 45.0% | |
GCCTCTTTCAAGAGCAAAGT+TGG | + | tig0037246:14247-14266 | None:intergenic | 45.0% | |
! | ATTTTCACTCCTCAACGTGC+TGG | - | tig0037246:14282-14301 | Msa1456390:intron | 45.0% |
ATTACATCTCCAGCACGTTG+AGG | + | tig0037246:14294-14313 | None:intergenic | 45.0% | |
AGAGTGAGTGAGCGAGTAAT+TGG | + | tig0037246:14364-14383 | None:intergenic | 45.0% | |
!! | GAGGTTTTGTCGTGCTTTTG+TGG | - | tig0037246:14837-14856 | Msa1456390:intron | 45.0% |
GCAAATTGGCACCCAAACAT+CGG | - | tig0037246:14862-14881 | Msa1456390:intron | 45.0% | |
CGATAGATTGGCAAAAGGCT+AGG | + | tig0037246:14969-14988 | None:intergenic | 45.0% | |
! | AGCCTTTTGCCAATCTATCG+TGG | - | tig0037246:14969-14988 | Msa1456390:intron | 45.0% |
CACCACGATAGATTGGCAAA+AGG | + | tig0037246:14974-14993 | None:intergenic | 45.0% | |
!! | TCCAGTTCAAAGAGCATTGC+AGG | - | tig0037246:14998-15017 | Msa1456390:intron | 45.0% |
ACCTGCAATGCTCTTTGAAC+TGG | + | tig0037246:15002-15021 | None:intergenic | 45.0% | |
!! | ACATGGCCTTTTCTTGGTGT+CGG | - | tig0037246:15292-15311 | Msa1456390:intron | 45.0% |
! | ATGAGAAGAGAGTGTGTGCA+AGG | + | tig0037246:15630-15649 | None:intergenic | 45.0% |
GCACACACTCTCTTCTCATA+TGG | - | tig0037246:15631-15650 | Msa1456390:intron | 45.0% | |
AAAGGCTACATTGGCACCAA+AGG | - | tig0037246:15994-16013 | Msa1456390:intron | 45.0% | |
ATTGGCACCAAAGGTAGTGT+TGG | - | tig0037246:16003-16022 | Msa1456390:intron | 45.0% | |
GCATTGGGCAAACACTATAG+AGG | + | tig0037246:16103-16122 | None:intergenic | 45.0% | |
TCGTAATTCATGCTAGGACG+TGG | - | tig0037246:16370-16389 | Msa1456390:intron | 45.0% | |
CGTAATTCATGCTAGGACGT+GGG | - | tig0037246:16371-16390 | Msa1456390:intron | 45.0% | |
GTAATTCATGCTAGGACGTG+GGG | - | tig0037246:16372-16391 | Msa1456390:intron | 45.0% | |
AGATAGGTCCAGACGAATCA+TGG | - | tig0037246:16848-16867 | Msa1456390:intron | 45.0% | |
! | CATTGGTGTTTCCATGTGGA+AGG | - | tig0037246:17125-17144 | Msa1456390:intron | 45.0% |
! | TTGGTGTTTCCATGTGGAAG+GGG | - | tig0037246:17127-17146 | Msa1456390:intron | 45.0% |
AACTACACATACCTCGAGTG+TGG | + | tig0037246:17155-17174 | None:intergenic | 45.0% | |
! | CTGCCTAGACAAGTGTTTTC+TGG | - | tig0037246:17230-17249 | Msa1456390:intron | 45.0% |
!! | TGTTTTCTGGTAGAGGGTAC+AGG | - | tig0037246:17243-17262 | Msa1456390:intron | 45.0% |
! | TGCCTACCTTTTGTCCTGTT+TGG | - | tig0037246:17515-17534 | Msa1456390:intron | 45.0% |
AGAGGTGGAAATGAGACCAA+TGG | - | tig0037246:17682-17701 | Msa1456390:intron | 45.0% | |
! | TCTTTTCTCCGATTGCTCTG+TGG | - | tig0037246:17991-18010 | Msa1456390:intron | 45.0% |
ACTTCAGCTCCCTGGAAAAA+AGG | - | tig0037246:18269-18288 | Msa1456390:CDS | 45.0% | |
!!! | CATTGACCGCCTTTTTTCCA+GGG | + | tig0037246:18281-18300 | None:intergenic | 45.0% |
! | AATGCAGCTGCTTTCTGGAA+TGG | - | tig0037246:18297-18316 | Msa1456390:CDS | 45.0% |
! | TTTTCTTCAGCTTCTGTCCC+CGG | + | tig0037246:18326-18345 | None:intergenic | 45.0% |
GCTGAAGAAAATATGAGCGG+CGG | - | tig0037246:18335-18354 | Msa1456390:CDS | 45.0% | |
TCAGTCCTCACAAACTCCTA+CGG | + | tig0037246:18664-18683 | None:intergenic | 45.0% | |
TTGCCTCTGTCTCTTCTAGC+GGG | + | tig0037246:14201-14220 | None:intergenic | 50.0% | |
GCAGCCGTAATGCATAACTG+AGG | + | tig0037246:14439-14458 | None:intergenic | 50.0% | |
ACTGTTCGTGCACTTGATGC+TGG | - | tig0037246:15173-15192 | Msa1456390:intron | 50.0% | |
!! | GTAGTGCCGACACCAAGAAA+AGG | + | tig0037246:15301-15320 | None:intergenic | 50.0% |
GAAGTAGGACTGGGAACACA+AGG | + | tig0037246:16401-16420 | None:intergenic | 50.0% | |
!! | AGGTTCGTGCATTTTCAGGG+TGG | - | tig0037246:16960-16979 | Msa1456390:intron | 50.0% |
! | GGTGCATTGGTGTTTCCATG+TGG | - | tig0037246:17121-17140 | Msa1456390:intron | 50.0% |
! | AACAAGATCCATGGCGCTGA+AGG | + | tig0037246:17600-17619 | None:intergenic | 50.0% |
CCAGGATTCCACAGAGCAAT+CGG | + | tig0037246:18002-18021 | None:intergenic | 50.0% | |
CGATTGCTCTGTGGAATCCT+GGG | - | tig0037246:18000-18019 | Msa1456390:intron | 50.0% | |
GACAAGGCGACAATGTCTTC+AGG | - | tig0037246:18067-18086 | Msa1456390:CDS | 50.0% | |
GTATTGGAACTTCAGCTCCC+TGG | - | tig0037246:18261-18280 | Msa1456390:CDS | 50.0% | |
TCAGCTCCCTGGAAAAAAGG+CGG | - | tig0037246:18272-18291 | Msa1456390:CDS | 50.0% | |
!!! | GCATTGACCGCCTTTTTTCC+AGG | + | tig0037246:18282-18301 | None:intergenic | 50.0% |
CCTCTAACTGTTCGGGCAAT+CGG | - | tig0037246:18389-18408 | Msa1456390:CDS | 50.0% | |
TACGTCCGTAGGAGTTTGTG+AGG | - | tig0037246:18656-18675 | Msa1456390:five_prime_UTR | 50.0% | |
AGGTGCGCCCAACAGAACAA+CGG | + | tig0037246:14088-14107 | None:intergenic | 55.0% | |
! | AAGCGGTGAGAAGTGCATCG+AGG | + | tig0037246:14128-14147 | None:intergenic | 55.0% |
GGAGCAGCACCACGATAGAT+TGG | + | tig0037246:14981-15000 | None:intergenic | 55.0% | |
! | GTAAAAGGTCTGGGGGCACA+TGG | - | tig0037246:15275-15294 | Msa1456390:intron | 55.0% |
TTCATGGGTGCAAACTCGCG+TGG | + | tig0037246:17059-17078 | None:intergenic | 55.0% | |
AGTGTGGTTCCCCTTCCACA+TGG | + | tig0037246:17139-17158 | None:intergenic | 55.0% | |
! | CATGGCGCTGAAGGTAGCAT+CGG | + | tig0037246:17591-17610 | None:intergenic | 55.0% |
CCGATTGCTCTGTGGAATCC+TGG | - | tig0037246:17999-18018 | Msa1456390:intron | 55.0% | |
! | CGGTCAATGCAGCTGCTTTC+TGG | - | tig0037246:18292-18311 | Msa1456390:CDS | 55.0% |
!! | CTGCTTTCTGGAATGGCCTC+CGG | - | tig0037246:18304-18323 | Msa1456390:CDS | 55.0% |
!! | TGCTTTCTGGAATGGCCTCC+GGG | - | tig0037246:18305-18324 | Msa1456390:CDS | 55.0% |
CCGATTGCCCGAACAGTTAG+AGG | + | tig0037246:18392-18411 | None:intergenic | 55.0% | |
!! | GTGCTGTTTGCTACGTCCGT+AGG | - | tig0037246:18645-18664 | Msa1456390:five_prime_UTR | 55.0% |
GGTGCGCCCAACAGAACAAC+GGG | + | tig0037246:14087-14106 | None:intergenic | 60.0% | |
CCTCTGTCTCTTCTAGCGGG+TGG | + | tig0037246:14198-14217 | None:intergenic | 60.0% | |
CCACCCGCTAGAAGAGACAG+AGG | - | tig0037246:14195-14214 | Msa1456390:exon | 60.0% | |
!! | GGGGGCACATGGCCTTTTCT+TGG | - | tig0037246:15286-15305 | Msa1456390:intron | 60.0% |
!! | CGTGCATTTTCAGGGTGGCC+AGG | - | tig0037246:16965-16984 | Msa1456390:intron | 60.0% |
TGGAAGGGGAACCACACTCG+AGG | - | tig0037246:17141-17160 | Msa1456390:intron | 60.0% | |
! | GCGCTGAAGGTAGCATCGGA+TGG | + | tig0037246:17587-17606 | None:intergenic | 60.0% |
CGATGCTACCTTCAGCGCCA+TGG | - | tig0037246:17589-17608 | Msa1456390:intron | 60.0% | |
!! | GCTTTCTGGAATGGCCTCCG+GGG | - | tig0037246:18306-18325 | Msa1456390:CDS | 60.0% |
TCTTCAGCTTCTGTCCCCGG+AGG | + | tig0037246:18323-18342 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0037246 | gene | 13850 | 18698 | 13850 | ID=Msa1456390;Name=Msa1456390 |
tig0037246 | mRNA | 13850 | 18698 | 13850 | ID=Msa1456390-mRNA-1;Parent=Msa1456390;Name=Msa1456390-mRNA-1;_AED=0.23;_eAED=0.23;_QI=162|1|1|1|1|1|9|348|353 |
tig0037246 | exon | 13850 | 14287 | 13850 | ID=Msa1456390-mRNA-1:exon:20698;Parent=Msa1456390-mRNA-1 |
tig0037246 | exon | 15386 | 15586 | 15386 | ID=Msa1456390-mRNA-1:exon:20697;Parent=Msa1456390-mRNA-1 |
tig0037246 | exon | 15639 | 15698 | 15639 | ID=Msa1456390-mRNA-1:exon:20696;Parent=Msa1456390-mRNA-1 |
tig0037246 | exon | 16533 | 16633 | 16533 | ID=Msa1456390-mRNA-1:exon:20695;Parent=Msa1456390-mRNA-1 |
tig0037246 | exon | 16791 | 16824 | 16791 | ID=Msa1456390-mRNA-1:exon:20694;Parent=Msa1456390-mRNA-1 |
tig0037246 | exon | 17307 | 17411 | 17307 | ID=Msa1456390-mRNA-1:exon:20693;Parent=Msa1456390-mRNA-1 |
tig0037246 | exon | 17529 | 17599 | 17529 | ID=Msa1456390-mRNA-1:exon:20692;Parent=Msa1456390-mRNA-1 |
tig0037246 | exon | 18043 | 18145 | 18043 | ID=Msa1456390-mRNA-1:exon:20691;Parent=Msa1456390-mRNA-1 |
tig0037246 | exon | 18240 | 18698 | 18240 | ID=Msa1456390-mRNA-1:exon:20690;Parent=Msa1456390-mRNA-1 |
tig0037246 | five_prime_UTR | 18537 | 18698 | 18537 | ID=Msa1456390-mRNA-1:five_prime_utr;Parent=Msa1456390-mRNA-1 |
tig0037246 | CDS | 18240 | 18536 | 18240 | ID=Msa1456390-mRNA-1:cds;Parent=Msa1456390-mRNA-1 |
tig0037246 | CDS | 18043 | 18145 | 18043 | ID=Msa1456390-mRNA-1:cds;Parent=Msa1456390-mRNA-1 |
tig0037246 | CDS | 17529 | 17599 | 17529 | ID=Msa1456390-mRNA-1:cds;Parent=Msa1456390-mRNA-1 |
tig0037246 | CDS | 17307 | 17411 | 17307 | ID=Msa1456390-mRNA-1:cds;Parent=Msa1456390-mRNA-1 |
tig0037246 | CDS | 16791 | 16824 | 16791 | ID=Msa1456390-mRNA-1:cds;Parent=Msa1456390-mRNA-1 |
tig0037246 | CDS | 16533 | 16633 | 16533 | ID=Msa1456390-mRNA-1:cds;Parent=Msa1456390-mRNA-1 |
tig0037246 | CDS | 15639 | 15698 | 15639 | ID=Msa1456390-mRNA-1:cds;Parent=Msa1456390-mRNA-1 |
tig0037246 | CDS | 15386 | 15586 | 15386 | ID=Msa1456390-mRNA-1:cds;Parent=Msa1456390-mRNA-1 |
tig0037246 | CDS | 14198 | 14287 | 14198 | ID=Msa1456390-mRNA-1:cds;Parent=Msa1456390-mRNA-1 |
tig0037246 | three_prime_UTR | 13850 | 14197 | 13850 | ID=Msa1456390-mRNA-1:three_prime_utr;Parent=Msa1456390-mRNA-1 |
Gene Sequence |
Protein sequence |