AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0849080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0849080 MtrunA17_Chr5g0422781 88.952 353 16 3 1 345 1 338 0.0 623
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0849080 AT3G25805.1 58.261 345 120 5 7 345 6 332 4.64e-138 395

Find 95 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCCTCTTGTTGGACTTAT+TGG 0.179397 5_4:+35360623 Msa0849080:CDS
GCCTAAGGAGGTATAACTTT+TGG 0.241470 5_4:+35360922 Msa0849080:exon
TGTGCCGGTTGTTGGCTTAA+TGG 0.264612 5_4:+35360880 Msa0849080:CDS
GGTCGAATGGATGCAAATTT+TGG 0.266469 5_4:+35360686 Msa0849080:CDS
CTCTTGTTGGACTTATTGGT+GGG 0.290504 5_4:+35360627 Msa0849080:CDS
AGGGGTCTCTTGACGTACTA+TGG 0.291879 5_4:+35359865 Msa0849080:CDS
AAGAGGGAGATGAGAATCTA+AGG 0.321686 5_4:+35357399 Msa0849080:CDS
TGCAGAAGAGAGTGAATTGA+TGG 0.323703 5_4:-35357291 None:intergenic
GGAGCACAAGTGGGTTCTTC+TGG 0.326739 5_4:-35357336 None:intergenic
TTTGAAAGATACATTTAATC+TGG 0.328017 5_4:-35361163 None:intergenic
ACAGAATGTTCAGCAAAATA+AGG 0.336442 5_4:+35360832 Msa0849080:CDS
AATGGCTTATCTTCTTTGCT+TGG 0.344831 5_4:+35360898 Msa0849080:CDS
CAAGTGGGTTCTTCTGGAAT+TGG 0.345819 5_4:-35357330 None:intergenic
CTTAGATATGTGCCGGTTGT+TGG 0.346524 5_4:+35360872 Msa0849080:CDS
ATTCTCATCTCCCTCTTTCT+CGG 0.359762 5_4:-35357393 None:intergenic
GAGTACTTGGTTGGTTATCT+TGG 0.361713 5_4:+35360728 Msa0849080:CDS
TACGATCTGTGAACAGTAAA+GGG 0.363648 5_4:-35359827 None:intergenic
GGCTGGCTTACGCCTTCATA+TGG 0.369320 5_4:+35360759 Msa0849080:CDS
GGACTATTCAACTTTGTGAT+TGG 0.372455 5_4:+35359786 Msa0849080:CDS
TTGATGGAGCTGAAAGGTTT+TGG 0.375437 5_4:-35357275 None:intergenic
AATCGATACATGAAACTGTT+TGG 0.377550 5_4:-35361027 None:intergenic
ACACTTACAGGATGAAGAAC+TGG 0.392869 5_4:-35359665 None:intergenic
CCCAGGATGAGGGATTTGTT+TGG 0.402149 5_4:+35361076 Msa0849080:three_prime_UTR
TATTCAACTTTGTGATTGGA+TGG 0.402697 5_4:+35359790 Msa0849080:CDS
TTCATTCGGATAGCCATGTA+TGG 0.412397 5_4:-35360536 None:intergenic
TCTTCTTTGCTTGGAGCCTA+AGG 0.417585 5_4:+35360907 Msa0849080:CDS
TTTGATAGGGAGATCCTGTA+TGG 0.423490 5_4:+35358706 Msa0849080:intron
AGTTCTCCAAAGTGGGTTGT+GGG 0.427357 5_4:+35357424 Msa0849080:CDS
CCTCTTGTTGGACTTATTGG+TGG 0.429183 5_4:+35360626 Msa0849080:CDS
TCATGTATCGATTTCTCGAC+AGG 0.429766 5_4:+35361037 Msa0849080:three_prime_UTR
ATCTCCCTCTTTCTCGGATG+TGG 0.435940 5_4:-35357387 None:intergenic
AGAGTACCTACAGGAGCATA+AGG 0.447036 5_4:-35357485 None:intergenic
TATCATCAGCACTATTCATT+CGG 0.451292 5_4:-35360550 None:intergenic
TCCAAACAAATCCCTCATCC+TGG 0.453343 5_4:-35361077 None:intergenic
ACAAACGGTGCTCCTCTTGT+TGG 0.453644 5_4:+35360614 Msa0849080:CDS
CCCAAAAGTTATACCTCCTT+AGG 0.460674 5_4:-35360923 None:intergenic
GAGTTCTCCAAAGTGGGTTG+TGG 0.461457 5_4:+35357423 Msa0849080:CDS
ATGTCTTATATCTCTATTGT+GGG 0.461778 5_4:+35360655 Msa0849080:CDS
CTTGTTGGACTTATTGGTGG+GGG 0.466075 5_4:+35360629 Msa0849080:CDS
GTCGACCTGCGGAGCACAAG+TGG 0.469304 5_4:-35357346 None:intergenic
TTGTTGTCATCGTTATTGTT+TGG 0.474076 5_4:-35357169 None:intergenic
CAGCACCCCACAACCCACTT+TGG 0.476302 5_4:-35357430 None:intergenic
TATGTCTTATATCTCTATTG+TGG 0.480702 5_4:+35360654 Msa0849080:CDS
GACACAGTCAACTCTCTTGT+GGG 0.482976 5_4:+35358741 Msa0849080:CDS
AGTAGACAGATGGGAGTACT+TGG 0.483792 5_4:+35360715 Msa0849080:CDS
GGGGTCTCTTGACGTACTAT+GGG 0.484452 5_4:+35359866 Msa0849080:CDS
GTTAGCCACATCCGAGAAAG+AGG 0.484606 5_4:+35357382 Msa0849080:CDS
TTACGATCTGTGAACAGTAA+AGG 0.489239 5_4:-35359828 None:intergenic
TTGGGTTCTGTTATGACAAA+CGG 0.495529 5_4:+35360599 Msa0849080:CDS
TGGAGGGAACACAGCAATGT+TGG 0.495986 5_4:-35357203 None:intergenic
TAAGCCATTAAGCCAACAAC+CGG 0.500372 5_4:-35360884 None:intergenic
TTATCTTGGTTCAGAACGGC+TGG 0.501656 5_4:+35360742 Msa0849080:CDS
AGAACCCACTTGTGCTCCGC+AGG 0.505596 5_4:+35357341 Msa0849080:CDS
CACTTACAGGATGAAGAACT+GGG 0.507713 5_4:-35359664 None:intergenic
AGACACAGTCAACTCTCTTG+TGG 0.515361 5_4:+35358740 Msa0849080:CDS
TTCTTGCTTCAGATGTCAGA+AGG 0.519583 5_4:+35359765 Msa0849080:intron
TTGGTGGCATAGTAGACAGA+TGG 0.519695 5_4:+35360705 Msa0849080:CDS
TCTTGTTGGACTTATTGGTG+GGG 0.521227 5_4:+35360628 Msa0849080:CDS
CAGAGATATATCCCATATGA+AGG 0.524965 5_4:-35360771 None:intergenic
TTGAGGCAAAAGGTGAATGG+AGG 0.528767 5_4:-35357220 None:intergenic
TCTGAACTGATAGCCCATAC+AGG 0.530832 5_4:-35358720 None:intergenic
TTGTCAAGAATCCCAGGATG+AGG 0.548412 5_4:+35361065 Msa0849080:three_prime_UTR
CGTAAGAGAGATAGATACAA+GGG 0.553150 5_4:+35359846 Msa0849080:CDS
GCTGGCTTACGCCTTCATAT+GGG 0.557110 5_4:+35360760 Msa0849080:CDS
CCAAACAAATCCCTCATCCT+GGG 0.561184 5_4:-35361076 None:intergenic
TTGGTTATCTTGGTTCAGAA+CGG 0.562411 5_4:+35360738 Msa0849080:CDS
GACAGATGGGAGTACTTGGT+TGG 0.563907 5_4:+35360719 Msa0849080:CDS
AGTGAATTGATGGAGCTGAA+AGG 0.567019 5_4:-35357281 None:intergenic
GGATAGTTGTCAAGAATCCC+AGG 0.571542 5_4:+35361059 Msa0849080:three_prime_UTR
GAAGTATCTTAGATATGTGC+CGG 0.572628 5_4:+35360865 Msa0849080:CDS
TACGAAACATACTATTTGTG+AGG 0.575355 5_4:-35359902 None:intergenic
TGTGGATTTGCGTCGACCTG+CGG 0.577634 5_4:-35357357 None:intergenic
CTCGGATGTGGCTAACTCTG+TGG 0.577757 5_4:-35357375 None:intergenic
CATGTATCGATTTCTCGACA+GGG 0.580144 5_4:+35361038 Msa0849080:three_prime_UTR
CATCACTCTATCATCTCCAA+TGG 0.582082 5_4:+35357246 Msa0849080:CDS
TGTCAAGAATCCCAGGATGA+GGG 0.582180 5_4:+35361066 Msa0849080:three_prime_UTR
AAGTGGGTTGTGGGGTGCTG+AGG 0.586713 5_4:+35357433 Msa0849080:CDS
TGGTGGCATAGTAGACAGAT+GGG 0.587147 5_4:+35360706 Msa0849080:CDS
TCTTTGCTTGGAGCCTAAGG+AGG 0.591922 5_4:+35360910 Msa0849080:CDS
TCGTAAGAGAGATAGATACA+AGG 0.594101 5_4:+35359845 Msa0849080:CDS
TAAGGAGAGTTCTCCAAAGT+GGG 0.595163 5_4:+35357417 Msa0849080:CDS
GTTCTCCAAAGTGGGTTGTG+GGG 0.601465 5_4:+35357425 Msa0849080:CDS
TGAGGCAAAAGGTGAATGGA+GGG 0.610016 5_4:-35357219 None:intergenic
CTGGAATTGGAAACAACGAG+TGG 0.613214 5_4:-35357317 None:intergenic
TCATTCGGATAGCCATGTAT+GGG 0.618803 5_4:-35360535 None:intergenic
CTAAGGAGAGTTCTCCAAAG+TGG 0.619039 5_4:+35357416 Msa0849080:CDS
TTAGCCACATCCGAGAAAGA+GGG 0.621133 5_4:+35357383 Msa0849080:CDS
CCACCAATAAGTCCAACAAG+AGG 0.628509 5_4:-35360626 None:intergenic
TTGATAGGGAGATCCTGTAT+GGG 0.632251 5_4:+35358707 Msa0849080:intron
TCGACCTGCGGAGCACAAGT+GGG 0.650037 5_4:-35357345 None:intergenic
ACGATCTGTGAACAGTAAAG+GGG 0.671682 5_4:-35359826 None:intergenic
GGGTCTCTTGACGTACTATG+GGG 0.700610 5_4:+35359867 Msa0849080:CDS
AGGTTGTCACCGATCAACCA+AGG 0.701565 5_4:-35360809 None:intergenic
GTAAGAGAGATAGATACAAG+GGG 0.727954 5_4:+35359847 Msa0849080:CDS
ACTTACAGGATGAAGAACTG+GGG 0.768615 5_4:-35359663 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAAAAAAGAAGAAA+TGG + chr5_4:35359247-35359266 Msa0849080:intron 10.0%
!! AAATTATTGTAAGAGATAAA+GGG + chr5_4:35358416-35358435 Msa0849080:intron 15.0%
!! TCCAATAAAAAATTCAAAAT+TGG + chr5_4:35360580-35360599 Msa0849080:CDS 15.0%
!! CCAATAAAAAATTCAAAATT+GGG + chr5_4:35360581-35360600 Msa0849080:CDS 15.0%
!! GTTACATGAAATTAAGTTTA+TGG + chr5_4:35357696-35357715 Msa0849080:intron 20.0%
!!! AATTTTGCCAAAAAAATGTT+TGG + chr5_4:35357730-35357749 Msa0849080:intron 20.0%
!!! CACTTTTATCTTTAGTTAAA+AGG - chr5_4:35357871-35357890 None:intergenic 20.0%
!! GAAATTATTGTAAGAGATAA+AGG + chr5_4:35358415-35358434 Msa0849080:intron 20.0%
!! TAATCTATTAATGAGATAAG+TGG + chr5_4:35358439-35358458 Msa0849080:intron 20.0%
!!! TTGTTTTCTTGAATTTTGAT+AGG + chr5_4:35358692-35358711 Msa0849080:intron 20.0%
!!! TGTTTTCTTGAATTTTGATA+GGG + chr5_4:35358693-35358712 Msa0849080:intron 20.0%
!! CAACTTAAACATTATTGTTT+AGG - chr5_4:35358836-35358855 None:intergenic 20.0%
!! ATTGACAAATGTGAAAATAA+TGG - chr5_4:35358874-35358893 None:intergenic 20.0%
!!! ATTTTTTATCCTCTTTCTTT+TGG + chr5_4:35358920-35358939 Msa0849080:intron 20.0%
!! CGTATTATTATAAATTCACA+TGG - chr5_4:35359166-35359185 None:intergenic 20.0%
!! GTTAAAGGATTATATCAATT+GGG - chr5_4:35359497-35359516 None:intergenic 20.0%
!!! TGATTTTTTTGAGAATTATG+AGG + chr5_4:35359536-35359555 Msa0849080:intron 20.0%
!!! CCCAATTTTGAATTTTTTAT+TGG - chr5_4:35360584-35360603 None:intergenic 20.0%
!!! TTTAATCTGGTAATGTTTTT+AGG - chr5_4:35361153-35361172 None:intergenic 20.0%
!! TTTGAAAGATACATTTAATC+TGG - chr5_4:35361166-35361185 None:intergenic 20.0%
!!! TCTTTAGTTTGTGTTGAAAT+TGG + chr5_4:35357551-35357570 Msa0849080:intron 25.0%
! AATTAATGATATAGCTCATG+TGG + chr5_4:35357586-35357605 Msa0849080:intron 25.0%
!!! TCATTTCATTTTTGTCCTTT+TGG - chr5_4:35357654-35357673 None:intergenic 25.0%
!!! GTTTTTCTGAAGAAGTATAA+CGG - chr5_4:35357810-35357829 None:intergenic 25.0%
!! TAACTAAAGATAAAAGTGTG+AGG + chr5_4:35357873-35357892 Msa0849080:intron 25.0%
!! AACTAAAGATAAAAGTGTGA+GGG + chr5_4:35357874-35357893 Msa0849080:intron 25.0%
! CAATTCCTTCATTAACTAAA+AGG - chr5_4:35358114-35358133 None:intergenic 25.0%
! TCACGATCAATAATATGAAA+AGG + chr5_4:35358295-35358314 Msa0849080:intron 25.0%
! ATCCTAAAAAAGGAGTAATA+AGG + chr5_4:35358362-35358381 Msa0849080:intron 25.0%
!!! AACCTTATTACTCCTTTTTT+AGG - chr5_4:35358367-35358386 None:intergenic 25.0%
! AGGTTTCTGATTTAATAAAG+TGG + chr5_4:35358382-35358401 Msa0849080:intron 25.0%
! TGATTTAATAAAGTGGTTAG+AGG + chr5_4:35358389-35358408 Msa0849080:intron 25.0%
! TGAATGCAACAATTATCATA+TGG - chr5_4:35358539-35358558 None:intergenic 25.0%
!! TGTGAAAATAATGGAAGAAA+AGG - chr5_4:35358865-35358884 None:intergenic 25.0%
! GAGGATAAAAAATAGAAACA+TGG - chr5_4:35358913-35358932 None:intergenic 25.0%
!!! AATATACTGATTTGTAGTTC+TGG + chr5_4:35359080-35359099 Msa0849080:intron 25.0%
!! TCTGTTTTCTCAAGAAATTA+AGG - chr5_4:35359221-35359240 None:intergenic 25.0%
! AAGAAATGGAATTTAGATAG+AGG + chr5_4:35359261-35359280 Msa0849080:intron 25.0%
! AGAAATGGAATTTAGATAGA+GGG + chr5_4:35359262-35359281 Msa0849080:intron 25.0%
! AGTCTATACAAACAGAAATA+AGG + chr5_4:35359294-35359313 Msa0849080:intron 25.0%
! GGTTATCACATATACAAATA+GGG - chr5_4:35359476-35359495 None:intergenic 25.0%
! CGTTAAAGGATTATATCAAT+TGG - chr5_4:35359498-35359517 None:intergenic 25.0%
! AAGTTTGATAAGTACGTTAA+AGG - chr5_4:35359512-35359531 None:intergenic 25.0%
!!! TTCAATGATTTCTGTTTTGA+CGG + chr5_4:35359605-35359624 Msa0849080:CDS 25.0%
! TGTACAAGTAACATATGATT+TGG + chr5_4:35359691-35359710 Msa0849080:intron 25.0%
! AGAAATATACTCTTCTATGT+AGG - chr5_4:35359959-35359978 None:intergenic 25.0%
!!! TACAAAGTATTGTCAAATAG+CGG + chr5_4:35360064-35360083 Msa0849080:intron 25.0%
! CAACAAATTTCATTCGAAAT+GGG - chr5_4:35360171-35360190 None:intergenic 25.0%
! ACAACAAATTTCATTCGAAA+TGG - chr5_4:35360172-35360191 None:intergenic 25.0%
! TATGTCTTATATCTCTATTG+TGG + chr5_4:35360654-35360673 Msa0849080:CDS 25.0%
! ATGTCTTATATCTCTATTGT+GGG + chr5_4:35360655-35360674 Msa0849080:CDS 25.0%
! TACTTTACTTTGCACTAAAA+AGG + chr5_4:35360955-35360974 Msa0849080:intron 25.0%
! ACTTTACTTTGCACTAAAAA+GGG + chr5_4:35360956-35360975 Msa0849080:intron 25.0%
TTGTTGTCATCGTTATTGTT+TGG - chr5_4:35357172-35357191 None:intergenic 30.0%
! ATGATAGAGTGATGATTTTG+AGG - chr5_4:35357240-35357259 None:intergenic 30.0%
!! AAAAAAGAAAGAGTACCTAC+AGG - chr5_4:35357497-35357516 None:intergenic 30.0%
TCATATGCAAATGAACCAAA+AGG + chr5_4:35357636-35357655 Msa0849080:intron 30.0%
!!! TCTCAAGCAATGTACTTTTT+TGG - chr5_4:35358038-35358057 None:intergenic 30.0%
!! TACGTAGTAATGTTTTTACG+AGG - chr5_4:35358170-35358189 None:intergenic 30.0%
CGTAAAAACATTACTACGTA+TGG + chr5_4:35358170-35358189 Msa0849080:intron 30.0%
ATATGAAAAGGAGAAACCTA+AGG + chr5_4:35358307-35358326 Msa0849080:intron 30.0%
ACACCTAAACATCCTAAAAA+AGG + chr5_4:35358352-35358371 Msa0849080:intron 30.0%
!!! ACTCCTTTTTTAGGATGTTT+AGG - chr5_4:35358358-35358377 None:intergenic 30.0%
ACTTGTGATAGTATATAGAG+AGG + chr5_4:35358503-35358522 Msa0849080:intron 30.0%
!! TCAAAACATCAAGTTGATCA+AGG - chr5_4:35358612-35358631 None:intergenic 30.0%
GTTTAGGTGTAAAGAGAAAT+AGG - chr5_4:35358820-35358839 None:intergenic 30.0%
AAGAATCCTATCAAACAAAC+CGG - chr5_4:35358987-35359006 None:intergenic 30.0%
AAGTGTTATGATAGAAGAGT+AGG + chr5_4:35359023-35359042 Msa0849080:intron 30.0%
ATGATAGAAGAGTAGGATAA+AGG + chr5_4:35359030-35359049 Msa0849080:intron 30.0%
TGATAGAAGAGTAGGATAAA+GGG + chr5_4:35359031-35359050 Msa0849080:intron 30.0%
AGACTCAATTTAGTAAACAG+AGG + chr5_4:35359103-35359122 Msa0849080:intron 30.0%
GACTCAATTTAGTAAACAGA+GGG + chr5_4:35359104-35359123 Msa0849080:intron 30.0%
ATTTAGTAAACAGAGGGAAT+TGG + chr5_4:35359110-35359129 Msa0849080:intron 30.0%
TCCTTAATTGCTTGAGAAAT+TGG + chr5_4:35359133-35359152 Msa0849080:intron 30.0%
TATACAAATAGGGATTTAGC+TGG - chr5_4:35359466-35359485 None:intergenic 30.0%
GGGTTATCACATATACAAAT+AGG - chr5_4:35359477-35359496 None:intergenic 30.0%
AGGGAAATTGTTTCATCAAA+TGG - chr5_4:35359730-35359749 None:intergenic 30.0%
AGAAAAATTGTCCAACATCA+GGG - chr5_4:35359749-35359768 None:intergenic 30.0%
AAGAAAAATTGTCCAACATC+AGG - chr5_4:35359750-35359769 None:intergenic 30.0%
TATTCAACTTTGTGATTGGA+TGG + chr5_4:35359790-35359809 Msa0849080:CDS 30.0%
TACGAAACATACTATTTGTG+AGG - chr5_4:35359905-35359924 None:intergenic 30.0%
!! GTATATTTCTAGCAACAAAG+AGG + chr5_4:35359969-35359988 Msa0849080:intron 30.0%
GAAATGGGATTATGAAGAAA+GGG - chr5_4:35360156-35360175 None:intergenic 30.0%
TATACTACAATCTATGATGC+AGG - chr5_4:35360394-35360413 None:intergenic 30.0%
CATCATAGATTGTAGTATAG+CGG + chr5_4:35360395-35360414 Msa0849080:intron 30.0%
ATGTTGTCAATCGAAAATCA+CGG - chr5_4:35360442-35360461 None:intergenic 30.0%
TATCATCAGCACTATTCATT+CGG - chr5_4:35360553-35360572 None:intergenic 30.0%
!! TGTATACAATTTTTCAGCCT+TGG + chr5_4:35360792-35360811 Msa0849080:CDS 30.0%
! TATTTTGCTGAACATTCTGT+AGG - chr5_4:35360832-35360851 None:intergenic 30.0%
ACAGAATGTTCAGCAAAATA+AGG + chr5_4:35360832-35360851 Msa0849080:CDS 30.0%
AATCGATACATGAAACTGTT+TGG - chr5_4:35361030-35361049 None:intergenic 30.0%
!!! ATTTTGAGGCAAAAGGTGAA+TGG - chr5_4:35357226-35357245 None:intergenic 35.0%
!!! AGTGATGATTTTGAGGCAAA+AGG - chr5_4:35357233-35357252 None:intergenic 35.0%
! CTGAGGTCGTATATATTTTG+TGG + chr5_4:35357450-35357469 Msa0849080:CDS 35.0%
TCTCTCTCTTTAACTCACTT+CGG + chr5_4:35357843-35357862 Msa0849080:intron 35.0%
CTTGACAACAACTCAAAAAG+TGG + chr5_4:35357902-35357921 Msa0849080:intron 35.0%
CATACTTGATGTCGAAACAT+TGG + chr5_4:35357927-35357946 Msa0849080:intron 35.0%
AGTACATTGCTTGAGAGTTA+AGG + chr5_4:35358042-35358061 Msa0849080:intron 35.0%
!! TTAACTAAAAGGTGCCTTAG+TGG - chr5_4:35358103-35358122 None:intergenic 35.0%
!! AGGCACCTTTTAGTTAATGA+AGG + chr5_4:35358106-35358125 Msa0849080:intron 35.0%
AACCTCATAGTTCATGGAAA+CGG - chr5_4:35358210-35358229 None:intergenic 35.0%
TACTCTAACCTCATAGTTCA+TGG - chr5_4:35358216-35358235 None:intergenic 35.0%
CATTATCACAAATGCATCAG+AGG - chr5_4:35358242-35358261 None:intergenic 35.0%
CTCTGATGCATTTGTGATAA+TGG + chr5_4:35358240-35358259 Msa0849080:intron 35.0%
TTGCATTCAACCATACCATT+AGG + chr5_4:35358550-35358569 Msa0849080:intron 35.0%
TCATAGATTAAATTGTCCCC+AGG - chr5_4:35358583-35358602 None:intergenic 35.0%
AACATACCAAGATTCACGAA+CGG - chr5_4:35358795-35358814 None:intergenic 35.0%
! GTATTTTCGCCAAAAGAAAG+AGG - chr5_4:35358932-35358951 None:intergenic 35.0%
AGAATCCTATCAAACAAACC+GGG - chr5_4:35358986-35359005 None:intergenic 35.0%
GATAGAAGAGTAGGATAAAG+GGG + chr5_4:35359032-35359051 Msa0849080:intron 35.0%
TGCTTTAATCCTACCTTTAC+AGG - chr5_4:35359060-35359079 None:intergenic 35.0%
GCCAATTTCTCAAGCAATTA+AGG - chr5_4:35359137-35359156 None:intergenic 35.0%
TTCTACCTCTACATTGATCT+AGG + chr5_4:35359402-35359421 Msa0849080:intron 35.0%
TCTACCTCTACATTGATCTA+GGG + chr5_4:35359403-35359422 Msa0849080:intron 35.0%
GAGGAATATATACACTGTTC+TGG + chr5_4:35359555-35359574 Msa0849080:intron 35.0%
!!! GATTTCTGTTTTGACGGTTT+TGG + chr5_4:35359611-35359630 Msa0849080:CDS 35.0%
TGAAACAATTTCCCTGATGT+TGG + chr5_4:35359735-35359754 Msa0849080:intron 35.0%
GGACTATTCAACTTTGTGAT+TGG + chr5_4:35359786-35359805 Msa0849080:CDS 35.0%
TACGATCTGTGAACAGTAAA+GGG - chr5_4:35359830-35359849 None:intergenic 35.0%
TTACGATCTGTGAACAGTAA+AGG - chr5_4:35359831-35359850 None:intergenic 35.0%
TCGTAAGAGAGATAGATACA+AGG + chr5_4:35359845-35359864 Msa0849080:CDS 35.0%
CGTAAGAGAGATAGATACAA+GGG + chr5_4:35359846-35359865 Msa0849080:CDS 35.0%
GTAAGAGAGATAGATACAAG+GGG + chr5_4:35359847-35359866 Msa0849080:CDS 35.0%
!! ATTGTATCCTCTGAAGCATA+TGG + chr5_4:35360105-35360124 Msa0849080:intron 35.0%
!! TTGTATCCTCTGAAGCATAT+GGG + chr5_4:35360106-35360125 Msa0849080:intron 35.0%
CGAAATGGGATTATGAAGAA+AGG - chr5_4:35360157-35360176 None:intergenic 35.0%
GTCATAACTTCTCTTTGTGA+TGG + chr5_4:35360499-35360518 Msa0849080:intron 35.0%
! AGCATTTTTGATCCCATACA+TGG + chr5_4:35360523-35360542 Msa0849080:intron 35.0%
TTGGGTTCTGTTATGACAAA+CGG + chr5_4:35360599-35360618 Msa0849080:CDS 35.0%
TTGGTTATCTTGGTTCAGAA+CGG + chr5_4:35360738-35360757 Msa0849080:CDS 35.0%
CAGAGATATATCCCATATGA+AGG - chr5_4:35360774-35360793 None:intergenic 35.0%
!! ATTTTTCAGCCTTGGTTGAT+CGG + chr5_4:35360800-35360819 Msa0849080:CDS 35.0%
! GAAGTATCTTAGATATGTGC+CGG + chr5_4:35360865-35360884 Msa0849080:CDS 35.0%
AATGGCTTATCTTCTTTGCT+TGG + chr5_4:35360898-35360917 Msa0849080:CDS 35.0%
!! CCTAAGGAGGTATAACTTTT+GGG + chr5_4:35360923-35360942 Msa0849080:exon 35.0%
CATCACTCTATCATCTCCAA+TGG + chr5_4:35357246-35357265 Msa0849080:CDS 40.0%
!! AAGGTTTTGGTATGTGCCAT+TGG - chr5_4:35357265-35357284 None:intergenic 40.0%
! TTGATGGAGCTGAAAGGTTT+TGG - chr5_4:35357278-35357297 None:intergenic 40.0%
AGTGAATTGATGGAGCTGAA+AGG - chr5_4:35357284-35357303 None:intergenic 40.0%
TGCAGAAGAGAGTGAATTGA+TGG - chr5_4:35357294-35357313 None:intergenic 40.0%
ATTCTCATCTCCCTCTTTCT+CGG - chr5_4:35357396-35357415 None:intergenic 40.0%
AAGAGGGAGATGAGAATCTA+AGG + chr5_4:35357399-35357418 Msa0849080:CDS 40.0%
TAAGGAGAGTTCTCCAAAGT+GGG + chr5_4:35357417-35357436 Msa0849080:CDS 40.0%
TGCCAAAAAAATGTTTGGCC+TGG + chr5_4:35357735-35357754 Msa0849080:intron 40.0%
!!! AGCCAGGCCAAACATTTTTT+TGG - chr5_4:35357740-35357759 None:intergenic 40.0%
CTTCTCCATTTAAGGAGAAG+AGG + chr5_4:35357758-35357777 Msa0849080:intron 40.0%
TCCATTTAAGGAGAAGAGGA+GGG + chr5_4:35357762-35357781 Msa0849080:intron 40.0%
GAAGAGGAGGGAAAAAATGT+CGG + chr5_4:35357774-35357793 Msa0849080:intron 40.0%
AAGAGGAGGGAAAAAATGTC+GGG + chr5_4:35357775-35357794 Msa0849080:intron 40.0%
!! AGAGAGAGAGTACTATGTCA+TGG - chr5_4:35357832-35357851 None:intergenic 40.0%
CATTACTACGTATGGACTTG+AGG + chr5_4:35358178-35358197 Msa0849080:intron 40.0%
AACCGTTTCCATGAACTATG+AGG + chr5_4:35358205-35358224 Msa0849080:intron 40.0%
AGGCTAACTACCTAATGGTA+TGG - chr5_4:35358563-35358582 None:intergenic 40.0%
ATACCATTAGGTAGTTAGCC+TGG + chr5_4:35358562-35358581 Msa0849080:intron 40.0%
! TACCATTAGGTAGTTAGCCT+GGG + chr5_4:35358563-35358582 Msa0849080:intron 40.0%
TACGCAATTGCAAACTGATC+GGG - chr5_4:35358652-35358671 None:intergenic 40.0%
CTACGCAATTGCAAACTGAT+CGG - chr5_4:35358653-35358672 None:intergenic 40.0%
TTTGATAGGGAGATCCTGTA+TGG + chr5_4:35358706-35358725 Msa0849080:intron 40.0%
TTGATAGGGAGATCCTGTAT+GGG + chr5_4:35358707-35358726 Msa0849080:intron 40.0%
CTAAAATACGATTCCGCTCT+CGG - chr5_4:35358954-35358973 None:intergenic 40.0%
!! GTATTTTAGAAATGTGCCCC+CGG + chr5_4:35358965-35358984 Msa0849080:intron 40.0%
AATCCTATCAAACAAACCGG+GGG - chr5_4:35358984-35359003 None:intergenic 40.0%
GAATCCTATCAAACAAACCG+GGG - chr5_4:35358985-35359004 None:intergenic 40.0%
ACTTACAGGATGAAGAACTG+GGG - chr5_4:35359666-35359685 None:intergenic 40.0%
CACTTACAGGATGAAGAACT+GGG - chr5_4:35359667-35359686 None:intergenic 40.0%
ACACTTACAGGATGAAGAAC+TGG - chr5_4:35359668-35359687 None:intergenic 40.0%
ACTTGTACAGTGACACTTAC+AGG - chr5_4:35359680-35359699 None:intergenic 40.0%
TTCTTGCTTCAGATGTCAGA+AGG + chr5_4:35359765-35359784 Msa0849080:intron 40.0%
ACGATCTGTGAACAGTAAAG+GGG - chr5_4:35359829-35359848 None:intergenic 40.0%
TCATTCGGATAGCCATGTAT+GGG - chr5_4:35360538-35360557 None:intergenic 40.0%
TTCATTCGGATAGCCATGTA+TGG - chr5_4:35360539-35360558 None:intergenic 40.0%
CTCTTGTTGGACTTATTGGT+GGG + chr5_4:35360627-35360646 Msa0849080:CDS 40.0%
TCTTGTTGGACTTATTGGTG+GGG + chr5_4:35360628-35360647 Msa0849080:CDS 40.0%
! TCTCTATTGTGGGCTCTTTT+TGG + chr5_4:35360665-35360684 Msa0849080:CDS 40.0%
! GGTCGAATGGATGCAAATTT+TGG + chr5_4:35360686-35360705 Msa0849080:CDS 40.0%
! CGAATGGATGCAAATTTTGG+TGG + chr5_4:35360689-35360708 Msa0849080:CDS 40.0%
! GAGTACTTGGTTGGTTATCT+TGG + chr5_4:35360728-35360747 Msa0849080:CDS 40.0%
TAAGCCATTAAGCCAACAAC+CGG - chr5_4:35360887-35360906 None:intergenic 40.0%
!! GCCTAAGGAGGTATAACTTT+TGG + chr5_4:35360922-35360941 Msa0849080:exon 40.0%
CCCAAAAGTTATACCTCCTT+AGG - chr5_4:35360926-35360945 None:intergenic 40.0%
!! TCATGTATCGATTTCTCGAC+AGG + chr5_4:35361037-35361056 Msa0849080:three_prime_UTR 40.0%
!! CATGTATCGATTTCTCGACA+GGG + chr5_4:35361038-35361057 Msa0849080:three_prime_UTR 40.0%
TGAGGCAAAAGGTGAATGGA+GGG - chr5_4:35357222-35357241 None:intergenic 45.0%
TTGAGGCAAAAGGTGAATGG+AGG - chr5_4:35357223-35357242 None:intergenic 45.0%
CTGGAATTGGAAACAACGAG+TGG - chr5_4:35357320-35357339 None:intergenic 45.0%
!! CAAGTGGGTTCTTCTGGAAT+TGG - chr5_4:35357333-35357352 None:intergenic 45.0%
TTAGCCACATCCGAGAAAGA+GGG + chr5_4:35357383-35357402 Msa0849080:CDS 45.0%
CTAAGGAGAGTTCTCCAAAG+TGG + chr5_4:35357416-35357435 Msa0849080:CDS 45.0%
!! AGTTCTCCAAAGTGGGTTGT+GGG + chr5_4:35357424-35357443 Msa0849080:CDS 45.0%
TTGCTTCCTTATGCTCCTGT+AGG + chr5_4:35357479-35357498 Msa0849080:intron 45.0%
! AGAGTACCTACAGGAGCATA+AGG - chr5_4:35357488-35357507 None:intergenic 45.0%
TCTCCTTAAATGGAGAAGCC+AGG - chr5_4:35357756-35357775 None:intergenic 45.0%
CTCCATTTAAGGAGAAGAGG+AGG + chr5_4:35357761-35357780 Msa0849080:intron 45.0%
TCCCTCCTCTTCTCCTTAAA+TGG - chr5_4:35357766-35357785 None:intergenic 45.0%
!! GTCGAAACATTGGTGCTAGA+AGG + chr5_4:35357937-35357956 Msa0849080:intron 45.0%
!! CGAGTGCTGACATACTCTTT+AGG + chr5_4:35357977-35357996 Msa0849080:intron 45.0%
AGTAGCGATGGTCTAGGTTA+AGG - chr5_4:35358004-35358023 None:intergenic 45.0%
GCATATCCTAACAGTAGCGA+TGG - chr5_4:35358016-35358035 None:intergenic 45.0%
GACTCGCATAAAACTCAACG+TGG + chr5_4:35358138-35358157 Msa0849080:intron 45.0%
ACTACGTATGGACTTGAGGT+TGG + chr5_4:35358182-35358201 Msa0849080:intron 45.0%
AAGGAGAAACCTAAGGTCTC+AGG + chr5_4:35358314-35358333 Msa0849080:intron 45.0%
AGAAACCTAAGGTCTCAGGA+GGG + chr5_4:35358318-35358337 Msa0849080:intron 45.0%
! GAAAGCATGCTCCTGAAACT+GGG + chr5_4:35358469-35358488 Msa0849080:intron 45.0%
AAAGCATGCTCCTGAAACTG+GGG + chr5_4:35358470-35358489 Msa0849080:intron 45.0%
TTATCTTCCACCCCAGTTTC+AGG - chr5_4:35358483-35358502 None:intergenic 45.0%
! ACCATTAGGTAGTTAGCCTG+GGG + chr5_4:35358564-35358583 Msa0849080:intron 45.0%
ACGCAATTGCAAACTGATCG+GGG - chr5_4:35358651-35358670 None:intergenic 45.0%
TCTGAACTGATAGCCCATAC+AGG - chr5_4:35358723-35358742 None:intergenic 45.0%
AGACACAGTCAACTCTCTTG+TGG + chr5_4:35358740-35358759 Msa0849080:CDS 45.0%
GACACAGTCAACTCTCTTGT+GGG + chr5_4:35358741-35358760 Msa0849080:CDS 45.0%
ATCTTGCCGTTCGTGAATCT+TGG + chr5_4:35358786-35358805 Msa0849080:intron 45.0%
TTTGGCGAAAATACCGAGAG+CGG + chr5_4:35358938-35358957 Msa0849080:intron 45.0%
GGATAAAGGGGAACCTGTAA+AGG + chr5_4:35359044-35359063 Msa0849080:intron 45.0%
AAAGGGGAACCTGTAAAGGT+AGG + chr5_4:35359048-35359067 Msa0849080:intron 45.0%
CACACATGTAACGAAGAGTG+TGG - chr5_4:35359332-35359351 None:intergenic 45.0%
TGGTCCCTAGATCAATGTAG+AGG - chr5_4:35359410-35359429 None:intergenic 45.0%
GCGTCTTGCTCTCTATCATT+TGG + chr5_4:35359436-35359455 Msa0849080:intron 45.0%
GAAATACCGTATCTCGTACC+CGG + chr5_4:35360361-35360380 Msa0849080:intron 45.0%
TATGATGCAGGTACAGTACC+GGG - chr5_4:35360382-35360401 None:intergenic 45.0%
CTATGATGCAGGTACAGTAC+CGG - chr5_4:35360383-35360402 None:intergenic 45.0%
GCTCCTCTTGTTGGACTTAT+TGG + chr5_4:35360623-35360642 Msa0849080:CDS 45.0%
CCACCAATAAGTCCAACAAG+AGG - chr5_4:35360629-35360648 None:intergenic 45.0%
CCTCTTGTTGGACTTATTGG+TGG + chr5_4:35360626-35360645 Msa0849080:CDS 45.0%
CTTGTTGGACTTATTGGTGG+GGG + chr5_4:35360629-35360648 Msa0849080:CDS 45.0%
! TTGGTGGCATAGTAGACAGA+TGG + chr5_4:35360705-35360724 Msa0849080:CDS 45.0%
TGGTGGCATAGTAGACAGAT+GGG + chr5_4:35360706-35360725 Msa0849080:CDS 45.0%
!! AGTAGACAGATGGGAGTACT+TGG + chr5_4:35360715-35360734 Msa0849080:CDS 45.0%
TTATCTTGGTTCAGAACGGC+TGG + chr5_4:35360742-35360761 Msa0849080:CDS 45.0%
!! CTTAGATATGTGCCGGTTGT+TGG + chr5_4:35360872-35360891 Msa0849080:CDS 45.0%
TCTTCTTTGCTTGGAGCCTA+AGG + chr5_4:35360907-35360926 Msa0849080:CDS 45.0%
GGATAGTTGTCAAGAATCCC+AGG + chr5_4:35361059-35361078 Msa0849080:three_prime_UTR 45.0%
TTGTCAAGAATCCCAGGATG+AGG + chr5_4:35361065-35361084 Msa0849080:three_prime_UTR 45.0%
TGTCAAGAATCCCAGGATGA+GGG + chr5_4:35361066-35361085 Msa0849080:three_prime_UTR 45.0%
CCAAACAAATCCCTCATCCT+GGG - chr5_4:35361079-35361098 None:intergenic 45.0%
TCCAAACAAATCCCTCATCC+TGG - chr5_4:35361080-35361099 None:intergenic 45.0%
TGGAGGGAACACAGCAATGT+TGG - chr5_4:35357206-35357225 None:intergenic 50.0%
GTTAGCCACATCCGAGAAAG+AGG + chr5_4:35357382-35357401 Msa0849080:CDS 50.0%
ATCTCCCTCTTTCTCGGATG+TGG - chr5_4:35357390-35357409 None:intergenic 50.0%
!! GAGTTCTCCAAAGTGGGTTG+TGG + chr5_4:35357423-35357442 Msa0849080:CDS 50.0%
!! GTTCTCCAAAGTGGGTTGTG+GGG + chr5_4:35357425-35357444 Msa0849080:CDS 50.0%
TGGCCTGGCTTCTCCATTTA+AGG + chr5_4:35357750-35357769 Msa0849080:intron 50.0%
! TGGTGCTAGAAGGAATGCCT+CGG + chr5_4:35357947-35357966 Msa0849080:intron 50.0%
CCTAACAGTAGCGATGGTCT+AGG - chr5_4:35358010-35358029 None:intergenic 50.0%
CCTAGACCATCGCTACTGTT+AGG + chr5_4:35358007-35358026 Msa0849080:intron 50.0%
TCACTCTGCTCACTCCACTA+AGG + chr5_4:35358086-35358105 Msa0849080:intron 50.0%
GAGAAACCTAAGGTCTCAGG+AGG + chr5_4:35358317-35358336 Msa0849080:intron 50.0%
GAAACCTAAGGTCTCAGGAG+GGG + chr5_4:35358319-35358338 Msa0849080:intron 50.0%
AAACCTAAGGTCTCAGGAGG+GGG + chr5_4:35358320-35358339 Msa0849080:intron 50.0%
! CGAAAGCATGCTCCTGAAAC+TGG + chr5_4:35358468-35358487 Msa0849080:intron 50.0%
TCCCCAGGCTAACTACCTAA+TGG - chr5_4:35358568-35358587 None:intergenic 50.0%
AGAGAGCAAGACGCAGAACA+TGG - chr5_4:35359430-35359449 None:intergenic 50.0%
!! GACGGTTTTGGCAGAGTAGT+TGG + chr5_4:35359623-35359642 Msa0849080:CDS 50.0%
AGGGGTCTCTTGACGTACTA+TGG + chr5_4:35359865-35359884 Msa0849080:CDS 50.0%
GGGGTCTCTTGACGTACTAT+GGG + chr5_4:35359866-35359885 Msa0849080:CDS 50.0%
GGGTCTCTTGACGTACTATG+GGG + chr5_4:35359867-35359886 Msa0849080:CDS 50.0%
GAAGCATATGGGTACGCGTA+CGG + chr5_4:35360117-35360136 Msa0849080:intron 50.0%
! ACAGTACCGGGTACGAGATA+CGG - chr5_4:35360370-35360389 None:intergenic 50.0%
ACAAACGGTGCTCCTCTTGT+TGG + chr5_4:35360614-35360633 Msa0849080:CDS 50.0%
!! GTGGGCTCTTTTTGGTCGAA+TGG + chr5_4:35360673-35360692 Msa0849080:CDS 50.0%
!! GACAGATGGGAGTACTTGGT+TGG + chr5_4:35360719-35360738 Msa0849080:CDS 50.0%
! GCTGGCTTACGCCTTCATAT+GGG + chr5_4:35360760-35360779 Msa0849080:CDS 50.0%
AGGTTGTCACCGATCAACCA+AGG - chr5_4:35360812-35360831 None:intergenic 50.0%
!! TGTGCCGGTTGTTGGCTTAA+TGG + chr5_4:35360880-35360899 Msa0849080:CDS 50.0%
TCTTTGCTTGGAGCCTAAGG+AGG + chr5_4:35360910-35360929 Msa0849080:CDS 50.0%
! CCCAGGATGAGGGATTTGTT+TGG + chr5_4:35361076-35361095 Msa0849080:three_prime_UTR 50.0%
! GGAGCACAAGTGGGTTCTTC+TGG - chr5_4:35357339-35357358 None:intergenic 55.0%
! TGTGGATTTGCGTCGACCTG+CGG - chr5_4:35357360-35357379 None:intergenic 55.0%
CTCGGATGTGGCTAACTCTG+TGG - chr5_4:35357378-35357397 None:intergenic 55.0%
TATCCCCCTCCTGAGACCTT+AGG - chr5_4:35358326-35358345 None:intergenic 55.0%
! GTGCCCCCGGTTTGTTTGAT+AGG + chr5_4:35358978-35358997 Msa0849080:intron 55.0%
TCAGACAAATGAGCGCACGC+TGG + chr5_4:35359360-35359379 Msa0849080:intron 55.0%
CGCGTACCCATATGCTTCAG+AGG - chr5_4:35360115-35360134 None:intergenic 55.0%
!! GGCTGGCTTACGCCTTCATA+TGG + chr5_4:35360759-35360778 Msa0849080:CDS 55.0%
AGAACCCACTTGTGCTCCGC+AGG + chr5_4:35357341-35357360 Msa0849080:CDS 60.0%
TCGACCTGCGGAGCACAAGT+GGG - chr5_4:35357348-35357367 None:intergenic 60.0%
CAGCACCCCACAACCCACTT+TGG - chr5_4:35357433-35357452 None:intergenic 60.0%
!! AAGTGGGTTGTGGGGTGCTG+AGG + chr5_4:35357433-35357452 Msa0849080:CDS 60.0%
TCAGCACTCGTGCATGTCCG+AGG - chr5_4:35357967-35357986 None:intergenic 60.0%
GCATGCTCCTGAAACTGGGG+TGG + chr5_4:35358473-35358492 Msa0849080:intron 60.0%
GTCGACCTGCGGAGCACAAG+TGG - chr5_4:35357349-35357368 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 35357162 35361202 35357162 ID=Msa0849080;Name=Msa0849080
chr5_4 mRNA 35357162 35361202 35357162 ID=Msa0849080-mRNA-1;Parent=Msa0849080;Name=Msa0849080-mRNA-1;_AED=0.08;_eAED=0.08;_QI=20|0.8|0.66|1|0.8|0.66|6|241|346
chr5_4 exon 35357162 35357496 35357162 ID=Msa0849080-mRNA-1:exon:11826;Parent=Msa0849080-mRNA-1
chr5_4 exon 35358714 35358797 35358714 ID=Msa0849080-mRNA-1:exon:11827;Parent=Msa0849080-mRNA-1
chr5_4 exon 35359587 35359679 35359587 ID=Msa0849080-mRNA-1:exon:11828;Parent=Msa0849080-mRNA-1
chr5_4 exon 35359777 35359912 35359777 ID=Msa0849080-mRNA-1:exon:11829;Parent=Msa0849080-mRNA-1
chr5_4 exon 35360525 35360969 35360525 ID=Msa0849080-mRNA-1:exon:11830;Parent=Msa0849080-mRNA-1
chr5_4 exon 35360994 35361202 35360994 ID=Msa0849080-mRNA-1:exon:11831;Parent=Msa0849080-mRNA-1
chr5_4 five_prime_UTR 35357162 35357181 35357162 ID=Msa0849080-mRNA-1:five_prime_utr;Parent=Msa0849080-mRNA-1
chr5_4 CDS 35357182 35357496 35357182 ID=Msa0849080-mRNA-1:cds;Parent=Msa0849080-mRNA-1
chr5_4 CDS 35358714 35358797 35358714 ID=Msa0849080-mRNA-1:cds;Parent=Msa0849080-mRNA-1
chr5_4 CDS 35359587 35359679 35359587 ID=Msa0849080-mRNA-1:cds;Parent=Msa0849080-mRNA-1
chr5_4 CDS 35359777 35359912 35359777 ID=Msa0849080-mRNA-1:cds;Parent=Msa0849080-mRNA-1
chr5_4 CDS 35360525 35360937 35360525 ID=Msa0849080-mRNA-1:cds;Parent=Msa0849080-mRNA-1
chr5_4 three_prime_UTR 35360938 35360969 35360938 ID=Msa0849080-mRNA-1:three_prime_utr;Parent=Msa0849080-mRNA-1
chr5_4 three_prime_UTR 35360994 35361202 35360994 ID=Msa0849080-mRNA-1:three_prime_utr;Parent=Msa0849080-mRNA-1
Gene Sequence

>Msa0849080

ATGACAACAACAGCGTTGTCTCCAACATTGCTGTGTTCCCTCCATTCACCTTTTGCCTCAAAATCATCACTCTATCATCTCCAATGGCACATACCAAAACCTTTCAGCTCCATCAATTCACTCTCTTCTGCAAAACCACTCGTTGTTTCCAATTCCAGAAGAACCCACTTGTGCTCCGCAGGTCGACGCAAATCCACAGAGTTAGCCACATCCGAGAAAGAGGGAGATGAGAATCTAAGGAGAGTTCTCCAAAGTGGGTTGTGGGGTGCTGAGGTCGTATATATTTTGTGGCTCTTCTTGCTTCCTTATGCTCCTGGAGATCCTGTATGGGCTATCAGTTCAGACACAGTCAACTCTCTTGTGGGTCTTTCTCTCAATTTCTTTTTCATCTTGCCGTTCAAAATTTTTGCTTTGCAATTCAATGATTTCTGTTTTGACGGTTTTGGCAGAGTAGTTGGCATTCGTCTGATTGATGCCCCAGTTCTTCATCCTATGTCAGAAGGACTATTCAACTTTGTGATTGGATGGACATTCATGTTTGCCCCTTTACTGTTCACAGATCGTAAGAGAGATAGATACAAGGGGTCTCTTGACGTACTATGGGGACTGCAAATGTTCCTCACAAATACATTTTTGATCCCATACATGGCTATCCGAATGAATAGTGCTGATGATAACAATGCTCCAATAAAAAATTCAAAATTGGGTTCTGTTATGACAAACGGTGCTCCTCTTGTTGGACTTATTGGTGGGGGCATATGTCTTATATCTCTATTGTGGGCTCTTTTTGGTCGAATGGATGCAAATTTTGGTGGCATAGTAGACAGATGGGAGTACTTGGTTGGTTATCTTGGTTCAGAACGGCTGGCTTACGCCTTCATATGGGATATATCTCTGTATACAATTTTTCAGCCTTGGTTGATCGGTGACAACCTACAGAATGTTCAGCAAAATAAGGTTGCAGTAGTGAAGTATCTTAGATATGTGCCGGTTGTTGGCTTAATGGCTTATCTTCTTTGCTTGGAGCCTAAGGAGGTATAA

Protein sequence

>Msa0849080

MTTTALSPTLLCSLHSPFASKSSLYHLQWHIPKPFSSINSLSSAKPLVVSNSRRTHLCSAGRRKSTELATSEKEGDENLRRVLQSGLWGAEVVYILWLFLLPYAPGDPVWAISSDTVNSLVGLSLNFFFILPFKIFALQFNDFCFDGFGRVVGIRLIDAPVLHPMSEGLFNFVIGWTFMFAPLLFTDRKRDRYKGSLDVLWGLQMFLTNTFLIPYMAIRMNSADDNNAPIKNSKLGSVMTNGAPLVGLIGGGICLISLLWALFGRMDANFGGIVDRWEYLVGYLGSERLAYAFIWDISLYTIFQPWLIGDNLQNVQQNKVAVVKYLRYVPVVGLMAYLLCLEPKEV*