AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0790380

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0790380 MtrunA17_Chr2g0277021 98.868 707 7 1 1 706 1 707 0.0 1406
Msa0790380 MtrunA17_Chr2g0279901 55.556 621 270 3 45 663 31 647 0.0 689
Msa0790380 MtrunA17_Chr4g0049501 55.788 622 270 3 44 663 27 645 0.0 687
Msa0790380 MtrunA17_Chr8g0388761 51.458 583 252 11 70 632 38 609 0.0 545
Msa0790380 MtrunA17_Chr8g0388671 51.820 577 259 11 70 632 38 609 0.0 543
Msa0790380 MtrunA17_Chr4g0031321 49.085 601 282 10 71 652 10 605 0.0 531
Msa0790380 MtrunA17_Chr4g0031301 47.731 639 304 12 71 684 10 643 0.0 531
Msa0790380 MtrunA17_Chr7g0223181 50.865 578 253 10 71 627 10 577 0.0 530
Msa0790380 MtrunA17_Chr7g0262821 47.278 643 299 14 71 687 10 638 0.0 530
Msa0790380 MtrunA17_Chr4g0073741 50.256 585 267 11 69 637 7 583 1.26e-179 527
Msa0790380 MtrunA17_Chr7g0223291 47.500 640 295 13 71 680 10 638 3.49e-179 525
Msa0790380 MtrunA17_Chr7g0233311 46.774 558 277 9 71 613 10 562 5.26e-158 470
Msa0790380 MtrunA17_Chr7g0221661 45.769 579 287 14 71 630 10 580 6.51e-155 462
Msa0790380 MtrunA17_Chr7g0223751 46.512 559 275 12 71 613 10 560 5.46e-154 460
Msa0790380 MtrunA17_Chr2g0284681 46.114 579 283 12 69 627 7 576 1.03e-153 459
Msa0790380 MtrunA17_Chr8g0350731 44.781 594 303 12 35 613 5 588 5.15e-153 459
Msa0790380 MtrunA17_Chr2g0298851 46.524 561 278 11 69 613 8 562 1.79e-152 456
Msa0790380 MtrunA17_Chr7g0223731 46.057 558 279 11 71 613 10 560 4.40e-148 444
Msa0790380 MtrunA17_Chr7g0223781 44.154 573 301 10 71 630 10 576 4.61e-148 444
Msa0790380 MtrunA17_Chr2g0293581 43.869 579 303 10 69 630 9 582 5.79e-148 444
Msa0790380 MtrunA17_Chr7g0223721 45.745 564 285 10 64 612 3 560 7.36e-148 444
Msa0790380 MtrunA17_Chr7g0223741 45.161 558 285 10 71 613 10 561 3.12e-147 442
Msa0790380 MtrunA17_Chr7g0223031 45.714 560 282 12 69 613 8 560 3.83e-146 439
Msa0790380 MtrunA17_Chr7g0248131 45.455 561 281 13 71 613 10 563 1.77e-145 438
Msa0790380 MtrunA17_Chr7g0223621 43.463 589 303 14 71 639 10 588 6.21e-145 436
Msa0790380 MtrunA17_Chr7g0223711 42.123 584 315 11 71 637 10 587 2.98e-143 432
Msa0790380 MtrunA17_Chr6g0462601 43.501 577 303 11 68 627 6 576 8.78e-143 431
Msa0790380 MtrunA17_Chr7g0223851 44.348 575 297 12 55 613 3 570 9.80e-143 431
Msa0790380 MtrunA17_Chr5g0427901 44.366 568 284 11 71 612 10 571 1.14e-142 431
Msa0790380 MtrunA17_Chr4g0040931 44.345 557 289 10 71 612 10 560 4.21e-142 429
Msa0790380 MtrunA17_Chr7g0223801 45.324 556 283 12 71 612 10 558 1.17e-141 428
Msa0790380 MtrunA17_Chr2g0287631 43.261 601 309 11 71 649 10 600 1.49e-140 425
Msa0790380 MtrunA17_Chr2g0298861 44.386 570 284 13 70 612 9 572 2.29e-140 425
Msa0790380 MtrunA17_Chr7g0248151 45.617 559 281 12 71 613 10 561 6.59e-140 424
Msa0790380 MtrunA17_Chr7g0223701 42.237 599 313 15 71 643 10 601 3.07e-139 423
Msa0790380 MtrunA17_Chr7g0225671 45.259 559 282 13 71 613 17 567 3.63e-139 422
Msa0790380 MtrunA17_Chr6g0462711 42.539 583 297 12 71 626 11 582 4.90e-138 421
Msa0790380 MtrunA17_Chr6g0462681 42.857 581 299 12 68 626 6 575 9.80e-138 420
Msa0790380 MtrunA17_Chr7g0233301 44.186 559 259 13 71 613 10 531 1.06e-135 412
Msa0790380 MtrunA17_Chr2g0296391 44.722 521 268 9 71 576 10 525 1.11e-135 410
Msa0790380 MtrunA17_Chr7g0223631 43.243 555 285 12 71 613 10 546 8.12e-135 410
Msa0790380 MtrunA17_Chr7g0217971 43.682 554 274 11 71 613 10 536 9.24e-133 404
Msa0790380 MtrunA17_Chr6g0462771 42.424 561 286 11 71 606 10 558 2.77e-132 405
Msa0790380 MtrunA17_Chr6g0462641 41.446 567 297 10 71 613 10 565 2.96e-130 400
Msa0790380 MtrunA17_Chr7g0223821 44.569 534 257 13 69 585 8 519 2.12e-126 392
Msa0790380 MtrunA17_Chr7g0223541 43.992 491 257 8 136 613 33 518 3.75e-125 384
Msa0790380 MtrunA17_Chr4g0012541 41.637 562 294 12 69 613 8 552 1.65e-124 384
Msa0790380 MtrunA17_Chr7g0215261 41.416 565 266 13 69 613 8 527 9.80e-121 373
Msa0790380 MtrunA17_Chr7g0223681 43.539 503 262 11 155 643 8 502 6.12e-120 369
Msa0790380 MtrunA17_Chr7g0223831 40.998 561 280 13 69 613 8 533 1.06e-119 371
Msa0790380 MtrunA17_Chr6g0462611 41.366 527 280 11 123 630 11 527 9.99e-119 369
Msa0790380 MtrunA17_Chr7g0228281 38.673 618 302 13 20 613 13 577 1.23e-118 369
Msa0790380 MtrunA17_Chr2g0293601 42.604 507 238 11 71 563 10 477 8.82e-116 357
Msa0790380 MtrunA17_Chr8g0390821 38.951 629 285 17 71 626 12 614 2.55e-115 361
Msa0790380 MtrunA17_Chr2g0331381 39.560 546 249 12 65 596 1 479 1.36e-111 345
Msa0790380 MtrunA17_Chr2g0293561 43.979 382 198 7 71 441 10 386 1.32e-92 293
Msa0790380 MtrunA17_Chr6g0462861 36.617 538 305 14 71 595 10 524 2.70e-92 300
Msa0790380 MtrunA17_Chr2g0299921 42.453 424 224 8 29 443 992 1404 5.37e-88 302
Msa0790380 MtrunA17_Chr2g0299921 44.236 373 185 8 71 430 1414 1776 3.83e-80 279
Msa0790380 MtrunA17_Chr2g0299791 42.927 410 212 7 48 445 1020 1419 1.86e-87 300
Msa0790380 MtrunA17_Chr2g0299851 42.615 413 207 9 48 444 1016 1414 3.43e-87 299
Msa0790380 MtrunA17_Chr2g0299881 42.754 414 218 9 46 445 1011 1419 2.43e-84 291
Msa0790380 MtrunA17_Chr2g0299821 43.194 382 201 7 71 441 10 386 2.22e-83 272
Msa0790380 MtrunA17_Chr2g0299821 51.648 91 36 2 509 591 394 484 3.27e-18 88.2
Msa0790380 MtrunA17_Chr1g0166551 33.451 565 251 12 71 624 6 456 1.42e-78 260
Msa0790380 MtrunA17_Chr1g0151991 47.653 277 134 5 69 335 8 283 1.16e-74 243
Msa0790380 MtrunA17_Chr2g0293271 37.097 434 194 9 81 506 44 406 3.41e-71 237
Msa0790380 MtrunA17_Chr7g0245521 49.049 263 123 5 71 323 10 271 1.56e-70 231
Msa0790380 MtrunA17_Chr7g0245531 45.349 258 135 4 361 613 2 258 1.56e-61 208
Msa0790380 MtrunA17_Chr5g0394391 31.496 508 307 15 68 547 27 521 1.59e-60 213
Msa0790380 MtrunA17_Chr4g0004331 29.283 502 321 10 70 547 3 494 1.03e-56 207
Msa0790380 MtrunA17_Chr2g0331901 30.926 443 274 9 70 487 3 438 3.82e-54 200
Msa0790380 MtrunA17_Chr3g0098761 29.960 494 317 11 70 547 3 483 4.26e-54 199
Msa0790380 MtrunA17_Chr5g0444001 27.405 551 357 10 70 602 3 528 9.87e-53 191
Msa0790380 MtrunA17_Chr7g0223671 50.526 190 86 3 132 313 6 195 1.41e-51 177
Msa0790380 MtrunA17_Chr1g0188601 53.939 165 72 1 174 334 27 191 3.51e-51 176
Msa0790380 MtrunA17_Chr6g0462631 38.284 303 134 6 174 468 40 297 3.37e-49 174
Msa0790380 MtrunA17_Chr7g0223761 33.742 326 163 6 293 612 3 281 3.64e-48 173
Msa0790380 MtrunA17_Chr1g0152001 41.296 247 137 6 372 613 2 245 5.26e-46 166
Msa0790380 MtrunA17_Chr6g0462791 51.515 165 77 1 174 335 11 175 1.34e-45 160
Msa0790380 MtrunA17_Chr4g0064621 29.490 529 321 15 68 558 138 652 2.46e-45 172
Msa0790380 MtrunA17_Chr1g0188611 42.562 242 133 4 381 617 4 244 7.78e-43 156
Msa0790380 MtrunA17_Chr4g0046881 53.846 130 56 1 196 321 19 148 1.54e-42 151
Msa0790380 MtrunA17_Chr4g0060241 30.402 398 246 10 172 549 120 506 2.40e-42 161
Msa0790380 MtrunA17_Chr7g0223771 57.812 128 50 1 174 297 26 153 1.53e-40 146
Msa0790380 MtrunA17_Chr5g0442171 31.176 340 190 11 226 541 1 320 7.49e-39 146
Msa0790380 MtrunA17_Chr3g0120101 26.840 462 286 14 61 481 17 467 3.81e-38 152
Msa0790380 MtrunA17_Chr6g0462751 32.584 356 164 9 124 464 9 303 6.66e-38 143
Msa0790380 MtrunA17_Chr5g0394221 32.258 279 179 9 357 630 71 344 3.77e-34 134
Msa0790380 MtrunA17_Chr7g0223861 50.382 131 57 3 138 260 4 134 4.69e-30 115
Msa0790380 MtrunA17_Chr7g0245541 43.448 145 80 2 469 612 1 144 7.04e-29 114
Msa0790380 MtrunA17_Chr6g0462691 44.526 137 71 2 381 512 4 140 4.48e-28 110
Msa0790380 MtrunA17_Chr6g0462701 37.908 153 67 2 174 322 40 168 1.97e-24 100
Msa0790380 MtrunA17_Chr4g0046871 48.454 97 46 2 395 487 9 105 1.96e-22 92.8
Msa0790380 MtrunA17_Chr2g0284661 38.889 144 58 4 381 501 7 143 1.02e-16 77.8
Msa0790380 MtrunA17_Chr4g0064651 38.710 93 57 0 449 541 29 121 1.58e-15 73.6
Msa0790380 MtrunA17_Chr6g0481391 37.778 135 76 3 85 215 1 131 1.71e-15 73.6
Msa0790380 MtrunA17_Chr6g0481381 47.297 74 35 1 232 301 1 74 3.54e-15 74.3
Msa0790380 MtrunA17_Chr2g0299941 50.000 68 34 0 443 510 15 82 7.82e-13 64.7
Msa0790380 MtrunA17_Chr5g0394231 36.697 109 66 2 239 344 66 174 1.34e-12 67.0
Msa0790380 MtrunA17_Chr6g0462621 51.429 70 32 2 65 133 3 71 2.30e-12 62.8
Msa0790380 MtrunA17_Chr7g0223691 52.308 65 28 2 71 133 10 73 2.73e-11 59.7
Msa0790380 MtrunA17_Chr1g0188591 49.254 67 31 2 69 133 8 73 3.37e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0790380 AT5G49910.1 84.371 723 86 10 3 705 2 717 0.0 1175
Msa0790380 AT4G24280.1 83.171 719 104 4 3 706 2 718 0.0 1152
Msa0790380 AT5G09590.1 54.504 655 270 6 14 663 20 651 0.0 678
Msa0790380 AT4G37910.1 55.935 615 266 3 51 663 35 646 0.0 659
Msa0790380 AT4G37910.2 55.935 615 266 3 51 663 35 646 0.0 659
Msa0790380 AT5G28540.1 52.787 574 250 11 70 628 37 604 0.0 552
Msa0790380 AT5G42020.1 48.957 623 294 11 70 674 37 653 0.0 551
Msa0790380 AT5G42020.3 48.957 623 294 11 70 674 42 658 0.0 550
Msa0790380 AT5G02500.1 50.087 573 265 9 71 627 10 577 0.0 531
Msa0790380 AT5G02490.1 48.918 601 283 10 71 652 10 605 0.0 531
Msa0790380 AT3G12580.1 47.326 617 301 10 71 668 10 621 7.93e-179 525
Msa0790380 AT1G56410.1 48.700 577 277 8 71 633 10 581 1.05e-176 518
Msa0790380 AT3G09440.1 48.918 601 283 11 71 652 10 605 1.20e-176 519
Msa0790380 AT3G09440.4 48.918 601 283 11 71 652 10 605 1.20e-176 519
Msa0790380 AT3G09440.2 48.918 601 283 11 71 652 10 605 1.20e-176 519
Msa0790380 AT3G09440.3 48.918 601 283 11 71 652 10 605 1.20e-176 519
Msa0790380 AT1G16030.1 48.557 589 282 9 67 639 5 588 7.26e-176 517
Msa0790380 AT1G09080.2 51.215 576 263 10 70 632 42 612 1.46e-173 512
Msa0790380 AT1G09080.1 51.215 576 263 10 70 632 52 622 2.00e-173 512
Msa0790380 AT5G42020.2 53.279 488 210 9 70 545 37 518 3.49e-161 478
Msa0790380 AT5G02500.2 48.312 385 185 6 71 446 10 389 1.61e-109 342
Msa0790380 AT2G32120.1 30.556 504 310 11 68 549 28 513 3.02e-58 207
Msa0790380 AT2G32120.2 30.556 504 310 11 68 549 28 513 3.02e-58 207
Msa0790380 AT1G79920.1 29.331 508 313 14 70 547 3 494 3.87e-57 207
Msa0790380 AT1G79920.3 29.331 508 313 14 70 547 3 494 4.85e-57 207
Msa0790380 AT1G79920.2 29.331 508 313 14 70 547 3 494 4.85e-57 207
Msa0790380 AT1G79920.4 29.331 508 313 14 70 547 3 494 4.85e-57 207
Msa0790380 AT1G79930.2 29.134 508 314 13 70 547 3 494 3.91e-56 205
Msa0790380 AT1G79930.1 29.134 508 314 13 70 547 3 494 4.95e-56 205
Msa0790380 AT1G11660.4 28.571 511 337 11 70 561 3 504 4.31e-54 199
Msa0790380 AT1G11660.3 28.571 511 337 11 70 561 3 504 4.31e-54 199
Msa0790380 AT1G11660.1 28.571 511 337 11 70 561 3 504 4.31e-54 199
Msa0790380 AT1G11660.2 28.694 467 306 10 114 561 9 467 1.09e-47 180
Msa0790380 AT4G16660.1 26.840 462 299 12 70 497 26 482 1.68e-42 166
Msa0790380 AT4G16660.2 26.840 462 299 12 70 497 50 506 1.94e-42 166

Find 390 sgRNAs with CRISPR-Local

Find 540 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTGTTGGTGGATAATT+TGG 0.092404 5_3:+1167441 None:intergenic
GGTGGGAAGGGTAGTGTTTC+TGG 0.104549 5_3:+1165527 None:intergenic
TCCAATTCCTCTTGGTATTC+TGG 0.133724 5_3:-1164204 Msa0790380:three_prime_UTR
GTTTGTAATATTAGATAAAT+TGG 0.146075 5_3:-1163231 Msa0790380:three_prime_UTR
TTCAAACAACTCCCCAAATT+AGG 0.163204 5_3:-1167641 Msa0790380:five_prime_UTR
ATGAAACCCTAACCCTAATT+TGG 0.168091 5_3:+1167628 None:intergenic
TCTGTGTTCGTATGCTTATC+TGG 0.168659 5_3:-1163140 Msa0790380:three_prime_UTR
AGAAACCAAGGCCGTGTATT+TGG 0.174826 5_3:+1167575 None:intergenic
GTAACAATGGAGAGTGATTT+TGG 0.182896 5_3:-1162455 Msa0790380:three_prime_UTR
ATTACCTACTAAATAAAATA+AGG 0.195966 5_3:+1162027 Msa0790370:five_prime_UTR
GAGCTTAAAGATGCTATTTC+TGG 0.211733 5_3:-1164910 Msa0790380:CDS
GACGAGTCTGTCGCCGTTCT+TGG 0.217047 5_3:+1167270 None:intergenic
TCATGGTTTGCATCAGTTAA+AGG 0.225467 5_3:+1163175 Msa0790370:CDS
CGTCAAATGTGCATTCAATT+TGG 0.227303 5_3:+1162269 Msa0790370:five_prime_UTR
AGTTATAGAGATTATTTAAT+AGG 0.230973 5_3:-1164683 Msa0790380:three_prime_UTR
TGCCCTTGGGGCTGCAGTTC+AGG 0.235738 5_3:-1165820 Msa0790380:intron
AAGGGAATTATTACCATAAA+AGG 0.243270 5_3:-1162165 Msa0790380:three_prime_UTR
CCATGGCATCTTTAATAGTT+TGG 0.245937 5_3:+1164878 None:intergenic
AATGAATGCCATGCCTCTTT+TGG 0.250553 5_3:+1161821 Msa0790370:five_prime_UTR
TTATCTGGGGAGATTGATTT+TGG 0.255814 5_3:-1163125 Msa0790380:three_prime_UTR
TAGCGTTTCTCTAACAAATA+TGG 0.260963 5_3:-1163029 Msa0790380:three_prime_UTR
TTTAGTAATAGTTTCCTCTT+TGG 0.273377 5_3:-1161847 Msa0790380:three_prime_UTR
TTCTCCATTGTCCTTGGGTT+TGG 0.279104 5_3:-1165583 Msa0790380:CDS
GACGCACGTTTCTGTATCTT+TGG 0.280336 5_3:-1164557 Msa0790380:three_prime_UTR
ACTGCTGCATCCTTGGCTTA+TGG 0.282032 5_3:-1166780 Msa0790380:CDS
AGAGGCATGGCATTCATTAC+TGG 0.286065 5_3:-1161816 Msa0790380:three_prime_UTR
CTTCCCTGTGCCCTTGTCTA+TGG 0.287108 5_3:+1165302 None:intergenic
CTGGTTAAGCATACCATAAA+AGG 0.289084 5_3:-1162184 Msa0790380:three_prime_UTR
TCCTGCTAACCGGTGCCCTT+GGG 0.297149 5_3:-1162210 Msa0790380:three_prime_UTR
AATGATGCAACTTTGTATAA+AGG 0.300744 5_3:-1164385 Msa0790380:three_prime_UTR
GTGCTTCTTCCGTGCTAAAT+TGG 0.303995 5_3:-1164646 Msa0790380:three_prime_UTR
GTAAAATTTCTTTGCAGTTA+TGG 0.308820 5_3:+1162552 Msa0790370:CDS
GTTACCGAAGAAAAGGGTTT+TGG 0.309192 5_3:+1167507 None:intergenic
CCCTTCCACTTCTATCCATT+TGG 0.311552 5_3:-1167689 Msa0790380:five_prime_UTR
TGTAGAAATTAATGTCCTTC+AGG 0.311881 5_3:-1165460 Msa0790380:CDS
GAGAAATGCTAATAATAAAT+AGG 0.312248 5_3:+1162341 Msa0790370:five_prime_UTR
GTCCTGCTAACCGGTGCCCT+TGG 0.313080 5_3:-1162211 Msa0790380:three_prime_UTR
TCAAACAACTCCCCAAATTA+GGG 0.314528 5_3:-1167640 Msa0790380:five_prime_UTR
GACAGCTGAGAAAGCTAAAA+TGG 0.319675 5_3:-1166417 Msa0790380:CDS
AGATGTTTCTCCATTGTCCT+TGG 0.323323 5_3:-1165589 Msa0790380:CDS
TGAAACCCTAACCCTAATTT+GGG 0.323385 5_3:+1167629 None:intergenic
ATGCAGGTTCGTATCTTAAT+AGG 0.326245 5_3:+1164442 None:intergenic
AGGGTGAGAGAGAATTTGTT+AGG 0.327608 5_3:-1165440 Msa0790380:CDS
GGATGCAAAACTCTCAATTA+AGG 0.328971 5_3:-1165958 Msa0790380:CDS
CATGGCATCTTTAATAGTTT+GGG 0.330953 5_3:+1164879 None:intergenic
ATTTCCTTCGAAGCCACTTT+TGG 0.331266 5_3:+1162947 Msa0790370:CDS
AATGTGCATTCAATTTGGTT+AGG 0.336075 5_3:+1162274 Msa0790370:five_prime_UTR
CAACTCCCCAAATTAGGGTT+AGG 0.337705 5_3:-1167635 Msa0790380:five_prime_UTR
AAACAGGATATTACCATTAC+TGG 0.341919 5_3:-1165279 Msa0790380:CDS
TTTCTGTTGGTGGATAATTT+GGG 0.343137 5_3:+1167442 None:intergenic
TTTGAAGTGCTCTCTACTTC+TGG 0.345624 5_3:-1166666 Msa0790380:CDS
ACTAGTTAAAGATATGAAAA+AGG 0.347160 5_3:+1162074 Msa0790370:five_prime_UTR
CTGGATTGACAGTGACATTT+GGG 0.351553 5_3:+1165853 None:intergenic
GAAAGTTGTCGGTATCGATT+TGG 0.352181 5_3:-1167392 Msa0790380:CDS
TCTGGATTGACAGTGACATT+TGG 0.354339 5_3:+1165852 None:intergenic
ACCAATGCATCAAGCTCTTC+AGG 0.358829 5_3:-1162834 Msa0790380:three_prime_UTR
CTTTCAATTGCTTCTCAGTC+TGG 0.359163 5_3:+1164989 None:intergenic
ACCAGAATACCAAGAGGAAT+TGG 0.364370 5_3:+1164203 None:intergenic
AAGAGTGGTCTCAATATGTT+TGG 0.366947 5_3:+1166223 None:intergenic
GAAACCAAGGCCGTGTATTT+GGG 0.367690 5_3:+1167576 None:intergenic
AAGGATGCAGGCAGGATTGC+TGG 0.369853 5_3:-1166834 Msa0790380:CDS
TAATAATAGATGGAGAAAAC+AGG 0.371647 5_3:+1162507 Msa0790370:exon
ATTGATGAGGTGATTCTTGT+TGG 0.375118 5_3:-1165933 Msa0790380:CDS
AAACTCGATTGTCCAGCTAT+TGG 0.377600 5_3:-1167100 Msa0790380:CDS
TTTGTAATATTAGATAAATT+GGG 0.384311 5_3:-1163230 Msa0790380:three_prime_UTR
GTTATCAGATATGATGAAAA+AGG 0.385042 5_3:+1162764 Msa0790370:intron
ATTGTCACGACTGGCTTGAT+TGG 0.385082 5_3:-1164362 Msa0790380:three_prime_UTR
TGTGCGGACGATTCCATTGA+TGG 0.387975 5_3:-1163060 Msa0790380:three_prime_UTR
ATGTGCATTCAATTTGGTTA+GGG 0.388898 5_3:+1162275 Msa0790370:five_prime_UTR
ACACCACCTGGTAGCGAGTC+TGG 0.390173 5_3:-1164778 Msa0790380:CDS
CATGGTTTGCATCAGTTAAA+GGG 0.390782 5_3:+1163176 Msa0790370:CDS
CCCGTTTCATTTCTAATCTA+CGG 0.392723 5_3:+1167848 None:intergenic
CCTGCTGCATCTGCAGCTCC+AGG 0.394942 5_3:+1164805 None:intergenic
TTTGAATGATAAAGTAACTA+AGG 0.402530 5_3:-1166907 Msa0790380:CDS
TTACTATTACTATTAAGTTA+AGG 0.402685 5_3:-1161881 Msa0790380:three_prime_UTR
AACCGGTGCCCTTGGGGCAC+TGG 0.404347 5_3:-1162203 Msa0790380:three_prime_UTR
GATGTTTCTCCATTGTCCTT+GGG 0.404643 5_3:-1165588 Msa0790380:CDS
CGCTACATTGATGCCATCAA+TGG 0.407160 5_3:+1163047 Msa0790370:CDS
TCATATCTTTAACTAGTGTC+CGG 0.407763 5_3:-1162068 Msa0790380:three_prime_UTR
AAACAAATAATAATAATAGA+TGG 0.408743 5_3:+1162497 Msa0790370:exon
TGAACCAACTGCTGCATCCT+TGG 0.412300 5_3:-1166787 Msa0790380:CDS
GGTGAGAGGATGGATAGGTT+TGG 0.413341 5_3:+1167776 None:intergenic
GGTATTCTGGTTTCTCCAGA+TGG 0.414539 5_3:-1164191 Msa0790380:three_prime_UTR
ATTTAGGCTGGTGTCTTGGC+TGG 0.414758 5_3:-1165636 Msa0790380:intron
AAGGTGAGTGGCATGGTTGA+TGG 0.415747 5_3:+1162783 Msa0790370:CDS
TCCAAGGTCAAAGACCAAAA+TGG 0.416169 5_3:+1166734 None:intergenic
ACTGCTTTCCGGCTCGCTAA+TGG 0.420294 5_3:+1164261 None:intergenic
CCAAGGGCAACCACTTCATC+TGG 0.421073 5_3:+1165834 None:intergenic
AGCAATCCTGCCTGCATCCT+TGG 0.421237 5_3:+1166836 None:intergenic
TTCTCTGTGAAGAGGTTCAT+TGG 0.423406 5_3:-1167199 Msa0790380:CDS
CACAGAGAAGAAGGTGTTCT+CGG 0.423446 5_3:+1167213 None:intergenic
TCCTCTTTGGATTCCAAAAG+AGG 0.423801 5_3:-1161834 Msa0790380:three_prime_UTR
AGAGTTGTTGATTGGTTGGC+TGG 0.425635 5_3:-1166506 Msa0790380:CDS
GTGGGAAGGGTAGTGTTTCT+GGG 0.426262 5_3:+1165528 None:intergenic
ATGAATGGAAGGAAATGAAA+AGG 0.427790 5_3:+1167743 None:intergenic
CCCCAAGGGCACCGGTTAGC+AGG 0.429921 5_3:+1162209 Msa0790370:five_prime_UTR
ATTATTAGGGTCCTGCTAAC+CGG 0.430847 5_3:-1162220 Msa0790380:three_prime_UTR
CAGATGAAGTGGTTGCCCTT+GGG 0.432611 5_3:-1165833 Msa0790380:CDS
TGCGGAACCCCACGGGGAGC+AGG 0.433702 5_3:+1165375 None:intergenic
CTGTGTTCGTATGCTTATCT+GGG 0.437217 5_3:-1163139 Msa0790380:three_prime_UTR
ACGAAGCAACGGGGCTCCTC+CGG 0.437653 5_3:-1162916 Msa0790380:three_prime_UTR
TCTTACAAGGGCTAAATTTG+AGG 0.438497 5_3:-1166204 Msa0790380:CDS
AAAGTTGTCGGTATCGATTT+GGG 0.440783 5_3:-1167391 Msa0790380:CDS
AGAGTGGTCTCAATATGTTT+GGG 0.441226 5_3:+1166224 None:intergenic
ATTGAAAGAGCTAGGAGAAA+AGG 0.442500 5_3:-1164974 Msa0790380:CDS
GGACCCTAATAATAAATATG+AGG 0.442865 5_3:+1162230 Msa0790370:five_prime_UTR
TGAGACGGTTACCGAAGAAA+AGG 0.443785 5_3:+1167500 None:intergenic
ACCGTAGATTAGAAATGAAA+CGG 0.444068 5_3:-1167849 Msa0790380:five_prime_UTR
GGTAGGTTTGCCACCTTCCA+TGG 0.444552 5_3:+1167345 None:intergenic
ACCTTCGGCGTTGGTGATGA+TGG 0.444925 5_3:+1167324 None:intergenic
TTACCTACTAAATAAAATAA+GGG 0.445654 5_3:+1162028 Msa0790370:five_prime_UTR
GAGCTTGTTTGTCCTTCAAA+AGG 0.446462 5_3:+1166456 None:intergenic
GACTATAGAGAGTTGTTGAT+TGG 0.448100 5_3:-1166514 Msa0790380:intron
CGGTCAGATTGCCAAGCGTC+AGG 0.448199 5_3:-1167248 Msa0790380:CDS
TACTTCTGGTGATACACACT+TGG 0.448457 5_3:-1166652 Msa0790380:CDS
ATTGATTTAGGCTGGTGTCT+TGG 0.448822 5_3:-1165640 Msa0790380:intron
CGATGGGGTCCTCAAGTATG+TGG 0.449347 5_3:+1162599 Msa0790370:CDS
GATAGATTAGATCAGATCAT+AGG 0.449844 5_3:-1162413 Msa0790380:three_prime_UTR
TGCCATGGCTGCCCTCAATC+AGG 0.451859 5_3:-1164863 Msa0790380:CDS
AACACGTATCCCTGCTGTTC+AGG 0.452328 5_3:-1165904 Msa0790380:CDS
TTGGGCGAGCTTCTCACTCT+TGG 0.453525 5_3:-1163212 Msa0790380:three_prime_UTR
GCCACCTTCCATGGCGGCGA+CGG 0.457667 5_3:+1167354 None:intergenic
AACTCCCCAAATTAGGGTTA+GGG 0.459448 5_3:-1167634 Msa0790380:five_prime_UTR
GTTAGGGACAATAAATCTCT+TGG 0.460837 5_3:-1165423 Msa0790380:CDS
CCAGATGAAGTGGTTGCCCT+TGG 0.461546 5_3:-1165834 Msa0790380:CDS
TGCTGCTGCTGCTGTTGGGG+TGG 0.462939 5_3:-1163275 Msa0790380:three_prime_UTR
TGCTGAAGAAATTTCTGCTC+AGG 0.463110 5_3:-1167065 Msa0790380:intron
AAATATGGTTCAACAGATAG+TGG 0.463281 5_3:-1163014 Msa0790380:three_prime_UTR
TTAACTAGTGTCCGGGGCAC+CGG 0.464378 5_3:-1162060 Msa0790380:three_prime_UTR
GGTGAAAGGCTTTCTGTTGG+TGG 0.466768 5_3:+1167432 None:intergenic
CAAGGGCACAGGGAAGAAAC+AGG 0.466939 5_3:-1165295 Msa0790380:CDS
TGGTGATTGTCTATTGTTGT+TGG 0.467442 5_3:-1163255 Msa0790380:three_prime_UTR
TTTACAAGCTCCTGAACAGC+AGG 0.471374 5_3:+1165894 None:intergenic
TCAATTTGGTTAGGGGAAGT+TGG 0.474010 5_3:+1162283 Msa0790370:five_prime_UTR
TATAATAATCAATCAATGAA+TGG 0.474580 5_3:+1167728 None:intergenic
ACCTTCCATGGCGGCGACGG+CGG 0.475434 5_3:+1167357 None:intergenic
TTGGTCTTTGACCTTGGAGG+TGG 0.476298 5_3:-1166729 Msa0790380:CDS
CCGTAGATTAGAAATGAAAC+GGG 0.476489 5_3:-1167848 Msa0790380:five_prime_UTR
GAGGGGCCAGACTCGCTACC+AGG 0.477166 5_3:+1164772 None:intergenic
TATGTTCAGATCTTCTTGAC+AGG 0.478172 5_3:-1166178 Msa0790380:intron
GCTGCCCAAATACACGGCCT+TGG 0.482140 5_3:-1167580 Msa0790380:CDS
TAATTTGGGGAGTTGTTTGA+AGG 0.483956 5_3:+1167643 None:intergenic
ATCTCTTGGTAGCTTCCGCT+TGG 0.485746 5_3:-1165409 Msa0790380:CDS
ATTAACGACGGCCTGACGCT+TGG 0.485806 5_3:+1167237 None:intergenic
AAGTTCGACATTGATGCAAA+TGG 0.486650 5_3:-1165342 Msa0790380:CDS
CATATCTTTAACTAGTGTCC+GGG 0.487928 5_3:-1162067 Msa0790380:three_prime_UTR
AACACAATATCCACACCATC+TGG 0.488032 5_3:+1164176 None:intergenic
AAAATAAGGGAAATGCTAAC+CGG 0.488986 5_3:+1162041 Msa0790370:five_prime_UTR
CAGCAACAACAACTACCAAA+TGG 0.491503 5_3:+1167674 None:intergenic
CTGCATAACTTCCTGATTGA+GGG 0.491953 5_3:+1164852 None:intergenic
TTCAATCTGCGGAACCCCAC+GGG 0.492109 5_3:+1165368 None:intergenic
GTATTCCTCCTGCTCCCCGT+GGG 0.492587 5_3:-1165383 Msa0790380:CDS
GAATGCGGCGCGAGGGAAGG+TGG 0.493111 5_3:+1167465 None:intergenic
ACAGAGAAGAAGGTGTTCTC+GGG 0.493212 5_3:+1167214 None:intergenic
TCATCAGGCAAGGGAGCAGA+TGG 0.493669 5_3:-1164742 Msa0790380:CDS
GTAGAAATTAATGTCCTTCA+GGG 0.494626 5_3:-1165459 Msa0790380:CDS
AACTCTGGTCCAATTCCTCT+TGG 0.494801 5_3:-1164212 Msa0790380:three_prime_UTR
CAAGGTACTGGCACCAGTAA+TGG 0.496725 5_3:+1165266 None:intergenic
GGGTCCTCAAGTATGTGGGC+GGG 0.497126 5_3:+1162604 Msa0790370:CDS
TGAATGGAAGGAAATGAAAA+GGG 0.498708 5_3:+1167744 None:intergenic
AGAAAAGGTGGAAGCAAAGC+TGG 0.498767 5_3:-1164935 Msa0790380:CDS
GATGAGGTGATTCTTGTTGG+TGG 0.498989 5_3:-1165930 Msa0790380:CDS
CAGATCCTCATTTGTTCTAA+CGG 0.499228 5_3:-1162859 Msa0790380:three_prime_UTR
TTCTGTTGGTGGATAATTTG+GGG 0.500667 5_3:+1167443 None:intergenic
TGTGAATCATTGAAGTATGC+AGG 0.500733 5_3:+1166870 None:intergenic
CATTACTGGATTGCATTGGA+TGG 0.500915 5_3:-1161802 Msa0790380:three_prime_UTR
GCTGCATAACTTCCTGATTG+AGG 0.501316 5_3:+1164851 None:intergenic
ACTCTGCCCTTGCAACCATT+AGG 0.501732 5_3:-1164119 Msa0790380:intron
CCTGGAGCTGCAGATGCAGC+AGG 0.503847 5_3:-1164805 Msa0790380:CDS
GTGTATTTGGGCAGCACTTG+AGG 0.504133 5_3:+1167588 None:intergenic
GGGAGTGGTACGCTGACCTT+CGG 0.504739 5_3:+1167309 None:intergenic
GTCGTCAATGAGAAAGTTGT+CGG 0.504824 5_3:-1167403 Msa0790380:CDS
TGGGTTTGGAAACTCTAGGT+GGG 0.506495 5_3:-1165569 Msa0790380:CDS
GAGACGGTTACCGAAGAAAA+GGG 0.506580 5_3:+1167501 None:intergenic
GGCCCCTCAGAATCATCATC+AGG 0.507133 5_3:-1164757 Msa0790380:CDS
CCTGCTAACCGGTGCCCTTG+GGG 0.507538 5_3:-1162209 Msa0790380:three_prime_UTR
CTTGCCTGATGATGATTCTG+AGG 0.507741 5_3:+1164753 None:intergenic
GAACATGATCGGCATGAGAC+CGG 0.508503 5_3:+1162897 Msa0790370:CDS
TACTTTACCTAATGGTTGCA+AGG 0.509035 5_3:+1164112 None:intergenic
CCCTCACTCAAACAAACATC+AGG 0.511377 5_3:-1166385 Msa0790380:intron
AACCAGTGCCCCAAGGGCAC+CGG 0.511909 5_3:+1162201 Msa0790370:five_prime_UTR
ATAGAGAGTTGTTGATTGGT+TGG 0.512990 5_3:-1166510 Msa0790380:intron
ACAGATAGTGGATGTAGTCC+TGG 0.513125 5_3:-1163002 Msa0790380:three_prime_UTR
CCAATGCATCAAGCTCTTCA+GGG 0.513355 5_3:-1162833 Msa0790380:three_prime_UTR
TCGGCGTTGGTGATGATGGT+AGG 0.514213 5_3:+1167328 None:intergenic
TTCTACCACGATCCTCCGAT+GGG 0.514763 5_3:+1162583 Msa0790370:CDS
TTGCCTGATGATGATTCTGA+GGG 0.515307 5_3:+1164754 None:intergenic
AACAGTCATAATCAAATGCA+AGG 0.515465 5_3:+1162972 Msa0790370:CDS
CTGTGAAGAGGTTCATTGGT+AGG 0.515676 5_3:-1167195 Msa0790380:CDS
ATATTGAGACCACTCTTACA+AGG 0.516752 5_3:-1166217 Msa0790380:CDS
CCCTGAAGAGCTTGATGCAT+TGG 0.518000 5_3:+1162833 Msa0790370:CDS
AAATTCCGCCGTCGCCGCCA+TGG 0.519355 5_3:-1167362 Msa0790380:CDS
TGGTAATTTGTATAGCAGAT+TGG 0.520111 5_3:+1164281 None:intergenic
TATTATAAGTTGAATTGAGA+GGG 0.522345 5_3:+1162307 Msa0790370:five_prime_UTR
CATTCACGCTCGAGGAACTC+TGG 0.522954 5_3:-1164227 Msa0790380:three_prime_UTR
TCTGGTTTCTCCAGATGGTG+TGG 0.523229 5_3:-1164186 Msa0790380:three_prime_UTR
TTCATAACTGCCACAGCAGA+TGG 0.523408 5_3:-1166248 Msa0790380:CDS
CAAGCTCTTCAGGGATCACC+TGG 0.525156 5_3:-1162824 Msa0790380:three_prime_UTR
GAGCTTGTAAAGAAGATGAC+TGG 0.527440 5_3:-1165882 Msa0790380:CDS
CATTCATTACTGGATTGCAT+TGG 0.528871 5_3:-1161806 Msa0790380:three_prime_UTR
ACAAATTACCATTAGCGAGC+CGG 0.528978 5_3:-1164269 Msa0790380:three_prime_UTR
ACAATAATACCTGTATTTCA+CGG 0.529413 5_3:+1164525 None:intergenic
GGGGAATGCGGCGCGAGGGA+AGG 0.529489 5_3:+1167462 None:intergenic
AATCATTTGTAGAATCATGC+AGG 0.530033 5_3:+1164426 None:intergenic
TTATGACTGTTGACCAAAAG+TGG 0.530097 5_3:-1162960 Msa0790380:three_prime_UTR
GAACCTCTTCACAGAGAAGA+AGG 0.530342 5_3:+1167204 None:intergenic
TTTGCATCAGTTAAAGGGTA+GGG 0.531236 5_3:+1163181 Msa0790370:CDS
AATCAGGAAGTTATGCAGCT+TGG 0.532389 5_3:-1164847 Msa0790380:CDS
GGAGACTTCAAGAGAGATGA+AGG 0.532940 5_3:-1166485 Msa0790380:CDS
TCAGTGCTTGAGGTTGGTGA+TGG 0.533067 5_3:-1166693 Msa0790380:CDS
GGGTGAGAGAGAATTTGTTA+GGG 0.534415 5_3:-1165439 Msa0790380:CDS
ATAATATAATATAGGTCTTG+AGG 0.534538 5_3:-1166956 Msa0790380:intron
GAATCGTCCGCACAAGCCCC+AGG 0.535942 5_3:+1163069 Msa0790370:CDS
CTTGGTAGCTTCCGCTTGGA+CGG 0.536040 5_3:-1165405 Msa0790380:CDS
TGATATACAGGTTGAGAGGA+TGG 0.536379 5_3:-1165097 Msa0790380:intron
GTATAAAGGATTGTCACGAC+TGG 0.536603 5_3:-1164371 Msa0790380:three_prime_UTR
GGATCTGAAGCACATGATTG+AGG 0.537025 5_3:+1162875 Msa0790370:CDS
GGAAATGCTAACCGGTGCCC+CGG 0.537524 5_3:+1162049 Msa0790370:five_prime_UTR
GATGTCTCAGTGCTTGAGGT+TGG 0.537989 5_3:-1166699 Msa0790380:CDS
GACCCTAATAATAAATATGA+GGG 0.539048 5_3:+1162231 Msa0790370:five_prime_UTR
GAGCTAGGAGAAAAGGTACC+TGG 0.540979 5_3:-1164967 Msa0790380:CDS
AATTAGACCTGGGGCTTGTG+CGG 0.541882 5_3:-1163076 Msa0790380:three_prime_UTR
CTGCATCTGCAGCTCCAGGT+TGG 0.542960 5_3:+1164809 None:intergenic
TTGGGTTTGGAAACTCTAGG+TGG 0.543344 5_3:-1165570 Msa0790380:CDS
AATACAGGTATTATTGTGGA+TGG 0.545289 5_3:-1164519 Msa0790380:three_prime_UTR
AAATTTAGCCCTTGTAAGAG+TGG 0.545733 5_3:+1166208 None:intergenic
GTCAGTTGCTGCCATAGACA+AGG 0.546283 5_3:-1165313 Msa0790380:CDS
CTTAAAGATGCTATTTCTGG+TGG 0.546395 5_3:-1164907 Msa0790380:CDS
ATTGCCGGTTGGCGAGAGGA+TGG 0.546447 5_3:-1167883 None:intergenic
TTCCTGATTGAGGGCAGCCA+TGG 0.546693 5_3:+1164861 None:intergenic
CCTTGGCTTATGGTTTCGAA+AGG 0.546888 5_3:-1166770 Msa0790380:CDS
TTTAGCTTTCTCAGCTGTCT+CGG 0.547108 5_3:+1166421 None:intergenic
ATTAGATCAGATCATAGGAA+TGG 0.549160 5_3:-1162408 Msa0790380:three_prime_UTR
TCTTTGCAGTTATGGTGGAA+AGG 0.551046 5_3:+1162560 Msa0790370:CDS
ACCAGTAGAAAATTCATTGA+GGG 0.551286 5_3:-1165979 Msa0790380:CDS
TATTGAGACCACTCTTACAA+GGG 0.551559 5_3:-1166216 Msa0790380:CDS
GGTAGACAACAGAGTCCGCC+TGG 0.552888 5_3:+1165010 None:intergenic
GTTTGCATCAGTTAAAGGGT+AGG 0.553013 5_3:+1163180 Msa0790370:CDS
ACTGGATTGCATTGGATGGA+TGG 0.553522 5_3:-1161798 Msa0790380:three_prime_UTR
AGTGATTGTAAAGCATAGGT+TGG 0.553672 5_3:+1161749 Msa0790370:five_prime_UTR
GAGAAGCAATTGAAAGAGCT+AGG 0.553890 5_3:-1164982 Msa0790380:CDS
AGATGAAGTGGTTGCCCTTG+GGG 0.554418 5_3:-1165832 Msa0790380:CDS
ACAGACTCGCCCTTCCATCA+TGG 0.554790 5_3:+1163158 Msa0790370:CDS
GAGTGGCATGGTTGATGGAG+AGG 0.556435 5_3:+1162788 Msa0790370:CDS
CTCAGAATCATCATCAGGCA+AGG 0.557364 5_3:-1164752 Msa0790380:CDS
TTGACCAAAAGTGGCTTCGA+AGG 0.557537 5_3:-1162951 Msa0790380:three_prime_UTR
TCCGCCGTCGCCGCCATGGA+AGG 0.557762 5_3:-1167358 Msa0790380:CDS
TTAACTGATGCAAACCATGA+TGG 0.558427 5_3:-1163172 Msa0790380:three_prime_UTR
ATAATCAATCAATGAATGGA+AGG 0.558825 5_3:+1167732 None:intergenic
TGGTTAAGCATACCATAAAA+GGG 0.558920 5_3:-1162183 Msa0790380:three_prime_UTR
ACCTGGCCCTGTGAAAGAAA+AGG 0.559548 5_3:-1164950 Msa0790380:CDS
CCGGAGACGGTGACGTCGCG+AGG 0.560078 5_3:-1162648 Msa0790380:intron
GAATTGGAAGTGGAAGAAGA+AGG 0.561488 5_3:+1167538 None:intergenic
GCGTGGTGCAAAATTAGACC+TGG 0.562059 5_3:-1163087 Msa0790380:three_prime_UTR
GGTCCTCAAGTATGTGGGCG+GGG 0.562272 5_3:+1162605 Msa0790370:CDS
ACACCTTCTTCTCTGTGAAG+AGG 0.562706 5_3:-1167207 Msa0790380:CDS
GTTCTACCACGATCCTCCGA+TGG 0.563446 5_3:+1162582 Msa0790370:CDS
AAGGACATTAATTTCTACAC+TGG 0.563521 5_3:+1165464 None:intergenic
AAATTTCTTTGCAGTTATGG+TGG 0.564870 5_3:+1162555 Msa0790370:CDS
CAAAGGAGGACAAGGAGAAG+AGG 0.565066 5_3:-1165053 Msa0790380:CDS
CAGCAGCAGCAGCATGATCA+TGG 0.566973 5_3:+1163290 Msa0790370:CDS
CACCAGTAGAAAATTCATTG+AGG 0.566996 5_3:-1165980 Msa0790380:CDS
GTGAAATACAGGTATTATTG+TGG 0.567363 5_3:-1164523 Msa0790380:three_prime_UTR
ACCCCTCAAAAGTGTAACAA+TGG 0.567398 5_3:-1162468 Msa0790380:three_prime_UTR
CCTTTCGAAACCATAAGCCA+AGG 0.567775 5_3:+1166770 None:intergenic
ATGCTTAACCAGTGCCCCAA+GGG 0.568341 5_3:+1162195 Msa0790370:five_prime_UTR
GGAATAGGAAGAATTGGAAG+TGG 0.569184 5_3:+1167528 None:intergenic
AAAGGAGGACAAGGAGAAGA+GGG 0.570032 5_3:-1165052 Msa0790380:CDS
CTCATCACTAGGCAAGGTAC+TGG 0.570673 5_3:+1165254 None:intergenic
CTTCAATCTGCGGAACCCCA+CGG 0.570947 5_3:+1165367 None:intergenic
GCCGTCGCCGCCATGGAAGG+TGG 0.571675 5_3:-1167355 Msa0790380:CDS
TTCACAAAGGACTGCTACCA+AGG 0.572205 5_3:-1166853 Msa0790380:CDS
GACCTGAACTGCAGCCCCAA+GGG 0.573604 5_3:+1165818 None:intergenic
CTGATGCAAACCATGATGGA+AGG 0.574537 5_3:-1163168 Msa0790380:three_prime_UTR
GGGTTTCATCTATCTAAACA+TGG 0.575208 5_3:-1167614 Msa0790380:exon
AGAGGTGGTGTTAAAGTACC+AGG 0.575535 5_3:+1162806 Msa0790370:CDS
AGGGCAGAGTTATTCATCAC+AGG 0.577182 5_3:+1164132 None:intergenic
AGGACTGCTACCAAGGATGC+AGG 0.577737 5_3:-1166846 Msa0790380:CDS
AACTACCAAATGGATAGAAG+TGG 0.577897 5_3:+1167684 None:intergenic
GTAAGCAACAACGGAGGGAG+TGG 0.577943 5_3:+1167294 None:intergenic
CTGCTACCAAGGATGCAGGC+AGG 0.578828 5_3:-1166842 Msa0790380:CDS
ATCAGGCAAGGGAGCAGATG+GGG 0.579068 5_3:-1164740 Msa0790380:CDS
CGACCTGAACTGCAGCCCCA+AGG 0.579884 5_3:+1165817 None:intergenic
ACTTTACCTAATGGTTGCAA+GGG 0.581568 5_3:+1164113 None:intergenic
CAAATGCAAGGGCAACCACC+AGG 0.582712 5_3:+1162984 Msa0790370:CDS
GGGGTCCTCAAGTATGTGGG+CGG 0.582949 5_3:+1162603 Msa0790370:CDS
CACTGTCAATCCAGATGAAG+TGG 0.585751 5_3:-1165844 Msa0790380:CDS
GGAACCCCACGGGGAGCAGG+AGG 0.586360 5_3:+1165378 None:intergenic
CAGTCTCTATATAACCAACC+TGG 0.588475 5_3:-1164823 Msa0790380:CDS
TTCGGATTGGGGAGAAACCA+AGG 0.588752 5_3:+1167563 None:intergenic
CCTGATGTTTGTTTGAGTGA+GGG 0.590087 5_3:+1166385 None:intergenic
TGGCATGGTTGATGGAGAGG+TGG 0.590317 5_3:+1162791 Msa0790370:CDS
CGTGGTGCAAAATTAGACCT+GGG 0.591631 5_3:-1163086 Msa0790380:three_prime_UTR
CATCAGGCAAGGGAGCAGAT+GGG 0.592026 5_3:-1164741 Msa0790380:CDS
GAAGGTGAAAGGCTTTCTGT+TGG 0.592432 5_3:+1167429 None:intergenic
TGATGCAAACCATGATGGAA+GGG 0.592659 5_3:-1163167 Msa0790380:three_prime_UTR
CCAAACTATTAAAGATGCCA+TGG 0.593171 5_3:-1164878 Msa0790380:CDS
ACCTAGAGTTTCCAAACCCA+AGG 0.594061 5_3:+1165572 None:intergenic
TTATTATAAGTTGAATTGAG+AGG 0.594510 5_3:+1162306 Msa0790370:five_prime_UTR
TCTGAGTGATTGTAAAGCAT+AGG 0.596970 5_3:+1161745 Msa0790370:five_prime_UTR
TTGACGACACGGAAGGTGAA+AGG 0.597140 5_3:+1167418 None:intergenic
CAGTACCTTGCCTAGTGATG+AGG 0.597471 5_3:-1165253 Msa0790380:intron
CTCAATTAAGGATATTGATG+AGG 0.598604 5_3:-1165946 Msa0790380:CDS
GGTGTCCGTTAGAACAAATG+AGG 0.598833 5_3:+1162854 Msa0790370:CDS
ACTTCTGGTGATACACACTT+GGG 0.599635 5_3:-1166651 Msa0790380:CDS
AATAATAGATGGAGAAAACA+GGG 0.600370 5_3:+1162508 Msa0790370:exon
GGTACGCTGACCTTCGGCGT+TGG 0.600932 5_3:+1167315 None:intergenic
GGTATTCCTCCTGCTCCCCG+TGG 0.601224 5_3:-1165384 Msa0790380:CDS
TCCTTGGGTTTGGAAACTCT+AGG 0.601698 5_3:-1165573 Msa0790380:CDS
ACCTGATGTTTGTTTGAGTG+AGG 0.601734 5_3:+1166384 None:intergenic
CTGCCATAGACAAGGGCACA+GGG 0.603731 5_3:-1165305 Msa0790380:CDS
CAAATTCTCTCTCACCCTGA+AGG 0.606133 5_3:+1165445 None:intergenic
TTTGGATTCCAAAAGAGGCA+TGG 0.606256 5_3:-1161829 Msa0790380:three_prime_UTR
TGCAATAGACACAAAGAACC+AGG 0.606261 5_3:-1165028 Msa0790380:CDS
GTTTCCAAACCCAAGGACAA+TGG 0.606610 5_3:+1165579 None:intergenic
ATATACCTCATCACTAGGCA+AGG 0.607252 5_3:+1165248 None:intergenic
AATTTGGGGAATGCGGCGCG+AGG 0.608723 5_3:+1167457 None:intergenic
GGGTTTGGAAACTCTAGGTG+GGG 0.609313 5_3:-1165568 Msa0790380:CDS
GGTGGATAATTTGGGGAATG+CGG 0.609380 5_3:+1167450 None:intergenic
GGTTTGTCCATCAGCAGCGG+TGG 0.609839 5_3:+1165485 None:intergenic
GATGGGGTCCTCAAGTATGT+GGG 0.610469 5_3:+1162600 Msa0790370:CDS
GTTGTTGCTTACACCAAGAA+CGG 0.610720 5_3:-1167283 Msa0790380:CDS
ACAAATTGCCGGTTGGCGAG+AGG 0.610733 5_3:-1167887 None:intergenic
TAAGCCAAGGATGCAGCAGT+TGG 0.611075 5_3:+1166783 None:intergenic
ATGTTTGGGGCCATCTGCTG+TGG 0.611510 5_3:+1166238 None:intergenic
ACCAAATGGATAGAAGTGGA+AGG 0.612578 5_3:+1167688 None:intergenic
AGAGTCATTAGAGACGATAA+CGG 0.614625 5_3:-1167130 Msa0790380:CDS
TGGCGTGATTAGAATTGAGA+CGG 0.614990 5_3:+1167485 None:intergenic
CCAAATGGATAGAAGTGGAA+GGG 0.615386 5_3:+1167689 None:intergenic
TGTGCATTCAATTTGGTTAG+GGG 0.617125 5_3:+1162276 Msa0790370:five_prime_UTR
AGAAGATATACCTCATCACT+AGG 0.617745 5_3:+1165243 None:intergenic
ACCATCATCACCAACGCCGA+AGG 0.617924 5_3:-1167325 Msa0790380:CDS
CCTTCCCACCTCAAAATCAG+AGG 0.618118 5_3:-1165514 Msa0790380:CDS
GACTCGCTACCAGGTGGTGT+AGG 0.618229 5_3:+1164781 None:intergenic
TTTCTCATTGACGACACGGA+AGG 0.618619 5_3:+1167411 None:intergenic
TCTGCTGTGGCAGTTATGAA+CGG 0.623015 5_3:+1166251 None:intergenic
ACATGATTGAGGAACATGAT+CGG 0.627684 5_3:+1162886 Msa0790370:CDS
GCTGCCATAGACAAGGGCAC+AGG 0.627845 5_3:-1165306 Msa0790380:CDS
CATCAAAAGTACCACCTCCA+AGG 0.629538 5_3:+1166718 None:intergenic
TGGCCCTGTGAAAGAAAAGG+TGG 0.629625 5_3:-1164947 Msa0790380:CDS
TGGATGATATACAGGTTGAG+AGG 0.629889 5_3:-1165101 Msa0790380:intron
ACCCTAATAATAAATATGAG+GGG 0.630019 5_3:+1162232 Msa0790370:five_prime_UTR
GCAGCAGGACCTACACCACC+TGG 0.631841 5_3:-1164790 Msa0790380:CDS
CACATACTTGAGGACCCCAT+CGG 0.633311 5_3:-1162598 Msa0790380:three_prime_UTR
CCCTAATAATAAATATGAGG+GGG 0.634037 5_3:+1162233 Msa0790370:five_prime_UTR
ATTTGGGGAATGCGGCGCGA+GGG 0.634265 5_3:+1167458 None:intergenic
TATGCTTAACCAGTGCCCCA+AGG 0.634418 5_3:+1162194 Msa0790370:five_prime_UTR
TTGGTGTAAGCAACAACGGA+GGG 0.635190 5_3:+1167289 None:intergenic
TCAAGTGCTGCCCAAATACA+CGG 0.637196 5_3:-1167586 Msa0790380:CDS
TCTCCCCGCCCACATACTTG+AGG 0.638523 5_3:-1162608 Msa0790380:three_prime_UTR
TCAGAATCATCATCAGGCAA+GGG 0.642669 5_3:-1164751 Msa0790380:CDS
CAACTTTCTCATTGACGACA+CGG 0.643110 5_3:+1167407 None:intergenic
CATTGGTAGGAAGATGTCTG+AGG 0.643809 5_3:-1167182 Msa0790380:CDS
AGGACCCCATCGGAGGATCG+TGG 0.644063 5_3:-1162588 Msa0790380:three_prime_UTR
TATTCCTCCTGCTCCCCGTG+GGG 0.646272 5_3:-1165382 Msa0790380:CDS
TCGAACTTCACTTCAATCTG+CGG 0.646442 5_3:+1165357 None:intergenic
GGTTGAGAGGATGGTCAATG+AGG 0.648062 5_3:-1165088 Msa0790380:CDS
CGGAGACGGTGACGTCGCGA+GGG 0.648226 5_3:-1162647 Msa0790380:three_prime_UTR
TCTGGTGATACACACTTGGG+TGG 0.651969 5_3:-1166648 Msa0790380:CDS
AAAGTAATGTTGTGTCTGTG+TGG 0.653123 5_3:+1161960 Msa0790370:five_prime_UTR
CATGATCGGCATGAGACCGG+AGG 0.658608 5_3:+1162900 Msa0790370:CDS
GTTCTTGGTGTAAGCAACAA+CGG 0.661153 5_3:+1167285 None:intergenic
AGGTTTGCCACCTTCCATGG+CGG 0.661820 5_3:+1167348 None:intergenic
ACAGTCATAATCAAATGCAA+GGG 0.665151 5_3:+1162973 Msa0790370:CDS
ATACTTGAGGACCCCATCGG+AGG 0.666215 5_3:-1162595 Msa0790380:three_prime_UTR
ACTGGTTTGTCCATCAGCAG+CGG 0.667077 5_3:+1165482 None:intergenic
GAGTGGTCTCAATATGTTTG+GGG 0.667521 5_3:+1166225 None:intergenic
TCAGTTGCTGCCATAGACAA+GGG 0.668838 5_3:-1165312 Msa0790380:CDS
ATATCTTTAACTAGTGTCCG+GGG 0.669587 5_3:-1162066 Msa0790380:three_prime_UTR
AATTAACACAGACACGACAA+AGG 0.670561 5_3:+1161711 Msa0790370:five_prime_UTR
TTACAAGCTCCTGAACAGCA+GGG 0.671122 5_3:+1165895 None:intergenic
AAATCACTACCAATTTAGCA+CGG 0.675626 5_3:+1164637 None:intergenic
TCAATCTGCGGAACCCCACG+GGG 0.676124 5_3:+1165369 None:intergenic
GGGCCAGACTCGCTACCAGG+TGG 0.679501 5_3:+1164775 None:intergenic
GTGGTGCAAAATTAGACCTG+GGG 0.682694 5_3:-1163085 Msa0790380:three_prime_UTR
CAGGAGGAATACCGTCCAAG+CGG 0.683864 5_3:+1165394 None:intergenic
GGTGAAGAACATGCAGAGCG+TGG 0.689038 5_3:-1163104 Msa0790380:three_prime_UTR
CATACTTCAATGATTCACAA+AGG 0.689827 5_3:-1166866 Msa0790380:CDS
AAGAACGGCGACAGACTCGT+CGG 0.694498 5_3:-1167268 Msa0790380:CDS
TGTGTTCGTATGCTTATCTG+GGG 0.695498 5_3:-1163138 Msa0790380:three_prime_UTR
TGCCTGATGATGATTCTGAG+GGG 0.696479 5_3:+1164755 None:intergenic
TCTACCACGATCCTCCGATG+GGG 0.698881 5_3:+1162584 Msa0790370:CDS
CTTGGTGTAAGCAACAACGG+AGG 0.704805 5_3:+1167288 None:intergenic
GGAGAAACCAGAATACCAAG+AGG 0.716721 5_3:+1164197 None:intergenic
CGACTGGCTTGATTGGACGA+CGG 0.719837 5_3:-1164355 Msa0790380:three_prime_UTR
GGTGTTCTCGGGATTAACGA+CGG 0.722290 5_3:+1167225 None:intergenic
GAAACCCTAACCCTAATTTG+GGG 0.725965 5_3:+1167630 None:intergenic
ATAATAGATGGAGAAAACAG+GGG 0.729240 5_3:+1162509 Msa0790370:exon
GATAGTGGATGTAGTCCTGG+TGG 0.746904 5_3:-1162999 Msa0790380:three_prime_UTR
AATAGACACAAAGAACCAGG+CGG 0.795319 5_3:-1165025 Msa0790380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATAATATAATATAATAT+AGG - chr5_3:1162580-1162599 Msa0790380:three_prime_UTR 0.0%
!! TTTGTAATATTAGATAAATT+GGG - chr5_3:1166314-1166333 Msa0790380:intron 10.0%
!! AAACAAATAATAATAATAGA+TGG + chr5_3:1167050-1167069 None:intergenic 10.0%
!! TATAATAATCAATCAATGAA+TGG + chr5_3:1161819-1161838 Msa0790370:five_prime_UTR 15.0%
!! TATTATTATTCTATGTTCTT+AGG - chr5_3:1162522-1162541 Msa0790380:three_prime_UTR 15.0%
!! AGTTATAGAGATTATTTAAT+AGG - chr5_3:1164861-1164880 Msa0790380:CDS 15.0%
!!! TATAATTAGACTTTTCTTAT+AGG - chr5_3:1164956-1164975 Msa0790380:CDS 15.0%
!! GTACATAAATTTAAACAAAA+GGG + chr5_3:1165887-1165906 None:intergenic 15.0%
!! AGTACATAAATTTAAACAAA+AGG + chr5_3:1165888-1165907 None:intergenic 15.0%
!! ATATTCATATTCATATTCAT+TGG - chr5_3:1166125-1166144 Msa0790380:intron 15.0%
!! GTTTGTAATATTAGATAAAT+TGG - chr5_3:1166313-1166332 Msa0790380:intron 15.0%
!!! AGAAATTTTACTTTATTCTT+TGG - chr5_3:1167004-1167023 Msa0790380:intron 15.0%
!! TTACCTACTAAATAAAATAA+GGG + chr5_3:1167519-1167538 None:intergenic 15.0%
!! ATTACCTACTAAATAAAATA+AGG + chr5_3:1167520-1167539 None:intergenic 15.0%
!!! TTACTTTTTTTTTTTAGCAA+AGG - chr5_3:1167600-1167619 Msa0790380:exon 15.0%
!! TTACTATTACTATTAAGTTA+AGG - chr5_3:1167663-1167682 Msa0790380:five_prime_UTR 15.0%
!! ATAATATAATATAGGTCTTG+AGG - chr5_3:1162588-1162607 Msa0790380:three_prime_UTR 20.0%
!! TTTGAATGATAAAGTAACTA+AGG - chr5_3:1162637-1162656 Msa0790380:three_prime_UTR 20.0%
!!! ACTTGCTATATAATAAAGTA+AGG + chr5_3:1162953-1162972 Msa0790370:CDS 20.0%
!! TATAGTCAACATACAAAAAT+AGG + chr5_3:1163017-1163036 Msa0790370:CDS 20.0%
!!! GTGTATTTTTTGATTGATTT+AGG - chr5_3:1163892-1163911 Msa0790380:intron 20.0%
!! TTATTAAAACAGAATAACGA+GGG + chr5_3:1165462-1165481 None:intergenic 20.0%
!! ATTATTAAAACAGAATAACG+AGG + chr5_3:1165463-1165482 None:intergenic 20.0%
!!! TATTTTTTTTCTTCCAAACT+AGG + chr5_3:1165818-1165837 None:intergenic 20.0%
!! TATTAATTACTATTACTCCA+CGG + chr5_3:1166078-1166097 None:intergenic 20.0%
!! GAGAAATGCTAATAATAAAT+AGG + chr5_3:1167206-1167225 None:intergenic 20.0%
!!! TATTATAAGTTGAATTGAGA+GGG + chr5_3:1167240-1167259 None:intergenic 20.0%
!!! TTATTATAAGTTGAATTGAG+AGG + chr5_3:1167241-1167260 None:intergenic 20.0%
!!! TCAAAAACAATTTCCTTTTA+TGG + chr5_3:1167395-1167414 None:intergenic 20.0%
!! ACTAGTTAAAGATATGAAAA+AGG + chr5_3:1167473-1167492 None:intergenic 20.0%
!!! TTTCCCTTATTTTATTTAGT+AGG - chr5_3:1167513-1167532 Msa0790380:CDS 20.0%
!!! AAATGAAAAGGGTTTTGTTT+TGG + chr5_3:1161792-1161811 Msa0790370:five_prime_UTR 25.0%
! ATAATCAATCAATGAATGGA+AGG + chr5_3:1161815-1161834 Msa0790370:five_prime_UTR 25.0%
!! GAAAAACAATGAAACCATTT+TGG - chr5_3:1162796-1162815 Msa0790380:three_prime_UTR 25.0%
!! TAATTTGTACAAAGCTTGAA+AGG + chr5_3:1163239-1163258 Msa0790370:CDS 25.0%
! TCAGTGTAACTTATCAAAAA+TGG + chr5_3:1163803-1163822 None:intergenic 25.0%
! TCAATCAAAAAATACACATG+AGG + chr5_3:1163889-1163908 None:intergenic 25.0%
!!! ATTTTTTGATTGATTTAGGC+TGG - chr5_3:1163896-1163915 Msa0790380:intron 25.0%
! CAAGAGATAATTATAAACAC+CGG + chr5_3:1164425-1164444 None:intergenic 25.0%
! ACAATAATACCTGTATTTCA+CGG + chr5_3:1165022-1165041 None:intergenic 25.0%
! AATGATGCAACTTTGTATAA+AGG - chr5_3:1165159-1165178 Msa0790380:intron 25.0%
! CAATATAACACTTATAGACA+AGG + chr5_3:1165540-1165559 None:intergenic 25.0%
! GTCTATAAGTGTTATATTGT+TGG - chr5_3:1165541-1165560 Msa0790380:CDS 25.0%
! TGATTACAGATTAAGAAACT+GGG + chr5_3:1165790-1165809 None:intergenic 25.0%
!!! TAATTAGTTTGTTGTGAGAA+GGG - chr5_3:1165924-1165943 Msa0790380:CDS 25.0%
! GTTATCAGATATGATGAAAA+AGG + chr5_3:1166783-1166802 None:intergenic 25.0%
! GAATAGAAAATGAATGTTAC+CGG - chr5_3:1166877-1166896 Msa0790380:CDS 25.0%
! GTAAAATTTCTTTGCAGTTA+TGG + chr5_3:1166995-1167014 None:intergenic 25.0%
! AATAATAGATGGAGAAAACA+GGG + chr5_3:1167039-1167058 None:intergenic 25.0%
! TAATAATAGATGGAGAAAAC+AGG + chr5_3:1167040-1167059 None:intergenic 25.0%
! ACCCTAATAATAAATATGAG+GGG + chr5_3:1167315-1167334 None:intergenic 25.0%
! GACCCTAATAATAAATATGA+GGG + chr5_3:1167316-1167335 None:intergenic 25.0%
!! ATGGTAATAATTCCCTTTTA+TGG + chr5_3:1167376-1167395 None:intergenic 25.0%
! AAGGGAATTATTACCATAAA+AGG - chr5_3:1167379-1167398 Msa0790380:CDS 25.0%
! TTTAGTAATAGTTTCCTCTT+TGG - chr5_3:1167697-1167716 Msa0790380:five_prime_UTR 25.0%
ACCGTAGATTAGAAATGAAA+CGG - chr5_3:1161695-1161714 Msa0790380:three_prime_UTR 30.0%
TGAATGGAAGGAAATGAAAA+GGG + chr5_3:1161803-1161822 Msa0790370:five_prime_UTR 30.0%
ATGAATGGAAGGAAATGAAA+AGG + chr5_3:1161804-1161823 Msa0790370:five_prime_UTR 30.0%
! TATTCCAAAACCCTTTTCTT+CGG - chr5_3:1162033-1162052 Msa0790380:three_prime_UTR 30.0%
! TTTCTGTTGGTGGATAATTT+GGG + chr5_3:1162105-1162124 Msa0790370:five_prime_UTR 30.0%
CATACTTCAATGATTCACAA+AGG - chr5_3:1162678-1162697 Msa0790380:intron 30.0%
ATAAAGTAAGGAAGAAGAAG+TGG + chr5_3:1162941-1162960 Msa0790370:CDS 30.0%
TTAGAGGGTAACAAAAGATT+TGG + chr5_3:1163405-1163424 Msa0790370:CDS 30.0%
ACCAGTAGAAAATTCATTGA+GGG - chr5_3:1163565-1163584 Msa0790380:intron 30.0%
CTCAATTAAGGATATTGATG+AGG - chr5_3:1163598-1163617 Msa0790380:intron 30.0%
TTTGATAAGTTACACTGAAG+TGG - chr5_3:1163805-1163824 Msa0790380:intron 30.0%
TTGATAAGTTACACTGAAGT+GGG - chr5_3:1163806-1163825 Msa0790380:intron 30.0%
AAGGACATTAATTTCTACAC+TGG + chr5_3:1164083-1164102 None:intergenic 30.0%
TGTAGAAATTAATGTCCTTC+AGG - chr5_3:1164084-1164103 Msa0790380:intron 30.0%
GTAGAAATTAATGTCCTTCA+GGG - chr5_3:1164085-1164104 Msa0790380:intron 30.0%
AAACAGGATATTACCATTAC+TGG - chr5_3:1164265-1164284 Msa0790380:three_prime_UTR 30.0%
CGGTGTTTATAATTATCTCT+TGG - chr5_3:1164423-1164442 Msa0790380:three_prime_UTR 30.0%
TTATCTCTTGGATGATATAC+AGG - chr5_3:1164435-1164454 Msa0790380:three_prime_UTR 30.0%
CATGGCATCTTTAATAGTTT+GGG + chr5_3:1164668-1164687 None:intergenic 30.0%
AAATCACTACCAATTTAGCA+CGG + chr5_3:1164910-1164929 None:intergenic 30.0%
!!! TTGGTAGTGATTTTTGTCAA+TGG - chr5_3:1164917-1164936 Msa0790380:CDS 30.0%
! AAATTTTGTCCGTGAAATAC+AGG - chr5_3:1165010-1165029 Msa0790380:CDS 30.0%
GTGAAATACAGGTATTATTG+TGG - chr5_3:1165021-1165040 Msa0790380:CDS 30.0%
AATACAGGTATTATTGTGGA+TGG - chr5_3:1165025-1165044 Msa0790380:CDS 30.0%
AATCATTTGTAGAATCATGC+AGG + chr5_3:1165121-1165140 None:intergenic 30.0%
TGCTTAGAGCAAACTAAAAA+TGG + chr5_3:1165243-1165262 None:intergenic 30.0%
! TGGTAATTTGTATAGCAGAT+TGG + chr5_3:1165266-1165285 None:intergenic 30.0%
TTAAAAAGAAGACTGCTTTC+CGG + chr5_3:1165297-1165316 None:intergenic 30.0%
AGGGAAAATACTTTACCTAA+TGG + chr5_3:1165443-1165462 None:intergenic 30.0%
GTGATTACAGATTAAGAAAC+TGG + chr5_3:1165791-1165810 None:intergenic 30.0%
TGTAATCACAATACCTAGTT+TGG - chr5_3:1165802-1165821 Msa0790380:intron 30.0%
!! GTAATTAGTTTGTTGTGAGA+AGG - chr5_3:1165923-1165942 Msa0790380:CDS 30.0%
TTTATCCCTTGTTCTTGTAT+GGG - chr5_3:1166182-1166201 Msa0790380:CDS 30.0%
TAGCGTTTCTCTAACAAATA+TGG - chr5_3:1166515-1166534 Msa0790380:intron 30.0%
AAATATGGTTCAACAGATAG+TGG - chr5_3:1166530-1166549 Msa0790380:intron 30.0%
ACAGTCATAATCAAATGCAA+GGG + chr5_3:1166574-1166593 None:intergenic 30.0%
AACAGTCATAATCAAATGCA+AGG + chr5_3:1166575-1166594 None:intergenic 30.0%
AATAAAAATGCACGAAGCAA+CGG - chr5_3:1166617-1166636 Msa0790380:intron 30.0%
TGAGTTTGATAGAGAAAGAA+AGG - chr5_3:1166855-1166874 Msa0790380:CDS 30.0%
AAATTTCTTTGCAGTTATGG+TGG + chr5_3:1166992-1167011 None:intergenic 30.0%
ATAATAGATGGAGAAAACAG+GGG + chr5_3:1167038-1167057 None:intergenic 30.0%
! TAACAATGGAGAGTGATTTT+GGG - chr5_3:1167090-1167109 Msa0790380:CDS 30.0%
!!! TGATTTTGGGATCAAAGTAA+AGG - chr5_3:1167103-1167122 Msa0790380:CDS 30.0%
GATAGATTAGATCAGATCAT+AGG - chr5_3:1167131-1167150 Msa0790380:CDS 30.0%
ATTAGATCAGATCATAGGAA+TGG - chr5_3:1167136-1167155 Msa0790380:CDS 30.0%
ATGTGCATTCAATTTGGTTA+GGG + chr5_3:1167272-1167291 None:intergenic 30.0%
AATGTGCATTCAATTTGGTT+AGG + chr5_3:1167273-1167292 None:intergenic 30.0%
TCCCCCTCATATTTATTATT+AGG - chr5_3:1167310-1167329 Msa0790380:CDS 30.0%
CCCTAATAATAAATATGAGG+GGG + chr5_3:1167314-1167333 None:intergenic 30.0%
CCCCCTCATATTTATTATTA+GGG - chr5_3:1167311-1167330 Msa0790380:CDS 30.0%
GGACCCTAATAATAAATATG+AGG + chr5_3:1167317-1167336 None:intergenic 30.0%
TGGTTAAGCATACCATAAAA+GGG - chr5_3:1167361-1167380 Msa0790380:CDS 30.0%
TCATATCTTTAACTAGTGTC+CGG - chr5_3:1167476-1167495 Msa0790380:CDS 30.0%
AAAATAAGGGAAATGCTAAC+CGG + chr5_3:1167506-1167525 None:intergenic 30.0%
CCCGTTTCATTTCTAATCTA+CGG + chr5_3:1161699-1161718 Msa0790370:five_prime_UTR 35.0%
CCGTAGATTAGAAATGAAAC+GGG - chr5_3:1161696-1161715 Msa0790380:three_prime_UTR 35.0%
AACTACCAAATGGATAGAAG+TGG + chr5_3:1161863-1161882 Msa0790370:five_prime_UTR 35.0%
TAATTTGGGGAGTTGTTTGA+AGG + chr5_3:1161904-1161923 Msa0790370:five_prime_UTR 35.0%
TTCAAACAACTCCCCAAATT+AGG - chr5_3:1161903-1161922 Msa0790380:three_prime_UTR 35.0%
TCAAACAACTCCCCAAATTA+GGG - chr5_3:1161904-1161923 Msa0790380:three_prime_UTR 35.0%
TGAAACCCTAACCCTAATTT+GGG + chr5_3:1161918-1161937 Msa0790370:five_prime_UTR 35.0%
ATGAAACCCTAACCCTAATT+TGG + chr5_3:1161919-1161938 Msa0790370:five_prime_UTR 35.0%
GGGTTTCATCTATCTAAACA+TGG - chr5_3:1161930-1161949 Msa0790380:three_prime_UTR 35.0%
! AAGAAGAAGGTTTTCGGATT+GGG + chr5_3:1161996-1162015 Msa0790370:five_prime_UTR 35.0%
! AAGTGGAAGAAGAAGGTTTT+CGG + chr5_3:1162002-1162021 Msa0790370:five_prime_UTR 35.0%
!!! GGTTTTGGAATAGGAAGAAT+TGG + chr5_3:1162025-1162044 Msa0790370:five_prime_UTR 35.0%
!!! GAAGAAAAGGGTTTTGGAAT+AGG + chr5_3:1162034-1162053 Msa0790370:five_prime_UTR 35.0%
! TTCTGTTGGTGGATAATTTG+GGG + chr5_3:1162104-1162123 Msa0790370:five_prime_UTR 35.0%
! CTTTCTGTTGGTGGATAATT+TGG + chr5_3:1162106-1162125 Msa0790370:five_prime_UTR 35.0%
!! AAAGTTGTCGGTATCGATTT+GGG - chr5_3:1162153-1162172 Msa0790380:three_prime_UTR 35.0%
AGAGTCATTAGAGACGATAA+CGG - chr5_3:1162414-1162433 Msa0790380:three_prime_UTR 35.0%
! GCAAATGATTTTCCAATAGC+TGG + chr5_3:1162459-1162478 Msa0790370:five_prime_UTR 35.0%
TGTGAATCATTGAAGTATGC+AGG + chr5_3:1162677-1162696 Msa0790370:intron 35.0%
GACTATAGAGAGTTGTTGAT+TGG - chr5_3:1163030-1163049 Msa0790380:three_prime_UTR 35.0%
! ATAGAGAGTTGTTGATTGGT+TGG - chr5_3:1163034-1163053 Msa0790380:three_prime_UTR 35.0%
!! TGAAGGTATAGACCTTTTGA+AGG - chr5_3:1163076-1163095 Msa0790380:three_prime_UTR 35.0%
ATCAGGTATTTGCTTTCTCA+TGG - chr5_3:1163176-1163195 Msa0790380:three_prime_UTR 35.0%
TAGCAGAAGTGGTTAAAGAT+TGG + chr5_3:1163203-1163222 Msa0790370:CDS 35.0%
AACTCATAAACTAGCAGAAG+TGG + chr5_3:1163214-1163233 Msa0790370:CDS 35.0%
AGAGTGGTCTCAATATGTTT+GGG + chr5_3:1163323-1163342 Msa0790370:CDS 35.0%
AAGAGTGGTCTCAATATGTT+TGG + chr5_3:1163324-1163343 Msa0790370:CDS 35.0%
ATATTGAGACCACTCTTACA+AGG - chr5_3:1163327-1163346 Msa0790380:three_prime_UTR 35.0%
TATTGAGACCACTCTTACAA+GGG - chr5_3:1163328-1163347 Msa0790380:three_prime_UTR 35.0%
AAATTTAGCCCTTGTAAGAG+TGG + chr5_3:1163339-1163358 Msa0790370:CDS 35.0%
TCTTACAAGGGCTAAATTTG+AGG - chr5_3:1163340-1163359 Msa0790380:intron 35.0%
TATGTTCAGATCTTCTTGAC+AGG - chr5_3:1163366-1163385 Msa0790380:intron 35.0%
GCAAGCAGTTCAAAATTAGA+GGG + chr5_3:1163420-1163439 Msa0790370:CDS 35.0%
AGCAAGCAGTTCAAAATTAG+AGG + chr5_3:1163421-1163440 Msa0790370:CDS 35.0%
GTGACATTCAATTCAACATC+AGG + chr5_3:1163444-1163463 Msa0790370:CDS 35.0%
! GCTTTTGCAATAAAGCTTCA+AGG + chr5_3:1163502-1163521 Msa0790370:CDS 35.0%
CACCAGTAGAAAATTCATTG+AGG - chr5_3:1163564-1163583 Msa0790380:intron 35.0%
! TCCCTCAATGAATTTTCTAC+TGG + chr5_3:1163569-1163588 Msa0790370:CDS 35.0%
GGATGCAAAACTCTCAATTA+AGG - chr5_3:1163586-1163605 Msa0790380:intron 35.0%
ATTGATGAGGTGATTCTTGT+TGG - chr5_3:1163611-1163630 Msa0790380:intron 35.0%
!!! AAAACCTCTGATTTTGAGGT+GGG + chr5_3:1164037-1164056 None:intergenic 35.0%
GTTAGGGACAATAAATCTCT+TGG - chr5_3:1164121-1164140 Msa0790380:three_prime_UTR 35.0%
AAGTTCGACATTGATGCAAA+TGG - chr5_3:1164202-1164221 Msa0790380:three_prime_UTR 35.0%
AGAAGATATACCTCATCACT+AGG + chr5_3:1164304-1164323 None:intergenic 35.0%
CTTTATCTGCTTACTACTTC+TGG - chr5_3:1164358-1164377 Msa0790380:three_prime_UTR 35.0%
ATTGAAAGAGCTAGGAGAAA+AGG - chr5_3:1164570-1164589 Msa0790380:three_prime_UTR 35.0%
!! GAGCTTAAAGATGCTATTTC+TGG - chr5_3:1164634-1164653 Msa0790380:three_prime_UTR 35.0%
!! CTTAAAGATGCTATTTCTGG+TGG - chr5_3:1164637-1164656 Msa0790380:three_prime_UTR 35.0%
CCATGGCATCTTTAATAGTT+TGG + chr5_3:1164669-1164688 None:intergenic 35.0%
CCAAACTATTAAAGATGCCA+TGG - chr5_3:1164666-1164685 Msa0790380:three_prime_UTR 35.0%
ATGCAGGTTCGTATCTTAAT+AGG + chr5_3:1165105-1165124 None:intergenic 35.0%
ACTTTACCTAATGGTTGCAA+GGG + chr5_3:1165434-1165453 None:intergenic 35.0%
TACTTTACCTAATGGTTGCA+AGG + chr5_3:1165435-1165454 None:intergenic 35.0%
AACAACCAATTCTCCAACAT+CGG - chr5_3:1165741-1165760 Msa0790380:intron 35.0%
TCATTCCCATATAGACATTC+TGG - chr5_3:1165965-1165984 Msa0790380:CDS 35.0%
CATTCCCATATAGACATTCT+GGG - chr5_3:1165966-1165985 Msa0790380:CDS 35.0%
AAGTCCCAGAATGTCTATAT+GGG + chr5_3:1165973-1165992 None:intergenic 35.0%
!! ATATAGACATTCTGGGACTT+CGG - chr5_3:1165973-1165992 Msa0790380:CDS 35.0%
AAGAACAAGGGATAAACATG+GGG + chr5_3:1166178-1166197 None:intergenic 35.0%
CAAGAACAAGGGATAAACAT+GGG + chr5_3:1166179-1166198 None:intergenic 35.0%
ACAAGAACAAGGGATAAACA+TGG + chr5_3:1166180-1166199 None:intergenic 35.0%
GTTTATCCCTTGTTCTTGTA+TGG - chr5_3:1166181-1166200 Msa0790380:CDS 35.0%
TGGTGATTGTCTATTGTTGT+TGG - chr5_3:1166289-1166308 Msa0790380:intron 35.0%
TTTGCATCAGTTAAAGGGTA+GGG + chr5_3:1166366-1166385 None:intergenic 35.0%
! CATGGTTTGCATCAGTTAAA+GGG + chr5_3:1166371-1166390 None:intergenic 35.0%
! TCATGGTTTGCATCAGTTAA+AGG + chr5_3:1166372-1166391 None:intergenic 35.0%
TTAACTGATGCAAACCATGA+TGG - chr5_3:1166372-1166391 Msa0790380:intron 35.0%
!! TTATCTGGGGAGATTGATTT+TGG - chr5_3:1166419-1166438 Msa0790380:CDS 35.0%
TTATGACTGTTGACCAAAAG+TGG - chr5_3:1166584-1166603 Msa0790380:intron 35.0%
ATAAAAATGCACGAAGCAAC+GGG - chr5_3:1166618-1166637 Msa0790380:intron 35.0%
ACATGATTGAGGAACATGAT+CGG + chr5_3:1166661-1166680 None:intergenic 35.0%
CAGATCCTCATTTGTTCTAA+CGG - chr5_3:1166685-1166704 Msa0790380:CDS 35.0%
GATATGATGAAAAAGGTGAG+TGG + chr5_3:1166776-1166795 None:intergenic 35.0%
AAAATGAATGTTACCGGAGA+CGG - chr5_3:1166883-1166902 Msa0790380:CDS 35.0%
! TCCATTGTTACACTTTTGAG+GGG + chr5_3:1167080-1167099 None:intergenic 35.0%
! CTCCATTGTTACACTTTTGA+GGG + chr5_3:1167081-1167100 None:intergenic 35.0%
! TCTCCATTGTTACACTTTTG+AGG + chr5_3:1167082-1167101 None:intergenic 35.0%
! GTAACAATGGAGAGTGATTT+TGG - chr5_3:1167089-1167108 Msa0790380:CDS 35.0%
TGTGCATTCAATTTGGTTAG+GGG + chr5_3:1167271-1167290 None:intergenic 35.0%
CGTCAAATGTGCATTCAATT+TGG + chr5_3:1167278-1167297 None:intergenic 35.0%
CTGGTTAAGCATACCATAAA+AGG - chr5_3:1167360-1167379 Msa0790380:CDS 35.0%
CATATCTTTAACTAGTGTCC+GGG - chr5_3:1167477-1167496 Msa0790380:CDS 35.0%
ATATCTTTAACTAGTGTCCG+GGG - chr5_3:1167478-1167497 Msa0790380:CDS 35.0%
AAAGTAATGTTGTGTCTGTG+TGG + chr5_3:1167587-1167606 None:intergenic 35.0%
CATTCATTACTGGATTGCAT+TGG - chr5_3:1167738-1167757 Msa0790380:five_prime_UTR 35.0%
AGTGATTGTAAAGCATAGGT+TGG + chr5_3:1167798-1167817 None:intergenic 35.0%
TCTGAGTGATTGTAAAGCAT+AGG + chr5_3:1167802-1167821 None:intergenic 35.0%
AATTAACACAGACACGACAA+AGG + chr5_3:1167836-1167855 None:intergenic 35.0%
!!! GTTTTGTTTTGGTGAGAGGA+TGG + chr5_3:1161781-1161800 Msa0790370:five_prime_UTR 40.0%
!!! AAGGGTTTTGTTTTGGTGAG+AGG + chr5_3:1161785-1161804 Msa0790370:five_prime_UTR 40.0%
CCAAATGGATAGAAGTGGAA+GGG + chr5_3:1161858-1161877 Msa0790370:five_prime_UTR 40.0%
ACCAAATGGATAGAAGTGGA+AGG + chr5_3:1161859-1161878 Msa0790370:five_prime_UTR 40.0%
CAGCAACAACAACTACCAAA+TGG + chr5_3:1161873-1161892 Msa0790370:five_prime_UTR 40.0%
AACTCCCCAAATTAGGGTTA+GGG - chr5_3:1161910-1161929 Msa0790380:three_prime_UTR 40.0%
GAAACCCTAACCCTAATTTG+GGG + chr5_3:1161917-1161936 Msa0790370:five_prime_UTR 40.0%
! AGAAGAAGGTTTTCGGATTG+GGG + chr5_3:1161995-1162014 Msa0790370:five_prime_UTR 40.0%
! GAAGAAGAAGGTTTTCGGAT+TGG + chr5_3:1161997-1162016 Msa0790370:five_prime_UTR 40.0%
GAATTGGAAGTGGAAGAAGA+AGG + chr5_3:1162009-1162028 Msa0790370:five_prime_UTR 40.0%
GGAATAGGAAGAATTGGAAG+TGG + chr5_3:1162019-1162038 Msa0790370:five_prime_UTR 40.0%
! GTTACCGAAGAAAAGGGTTT+TGG + chr5_3:1162040-1162059 Msa0790370:five_prime_UTR 40.0%
TGGCGTGATTAGAATTGAGA+CGG + chr5_3:1162062-1162081 Msa0790370:five_prime_UTR 40.0%
CAACTTTCTCATTGACGACA+CGG + chr5_3:1162140-1162159 Msa0790370:five_prime_UTR 40.0%
GTCGTCAATGAGAAAGTTGT+CGG - chr5_3:1162141-1162160 Msa0790380:three_prime_UTR 40.0%
!! GAAAGTTGTCGGTATCGATT+TGG - chr5_3:1162152-1162171 Msa0790380:three_prime_UTR 40.0%
! GTTCTTGGTGTAAGCAACAA+CGG + chr5_3:1162262-1162281 Msa0790370:five_prime_UTR 40.0%
! GTTGTTGCTTACACCAAGAA+CGG - chr5_3:1162261-1162280 Msa0790380:three_prime_UTR 40.0%
TTCTCTGTGAAGAGGTTCAT+TGG - chr5_3:1162345-1162364 Msa0790380:three_prime_UTR 40.0%
AAACTCGATTGTCCAGCTAT+TGG - chr5_3:1162444-1162463 Msa0790380:three_prime_UTR 40.0%
TGCTGAAGAAATTTCTGCTC+AGG - chr5_3:1162479-1162498 Msa0790380:three_prime_UTR 40.0%
GAAGAAATTTCTGCTCAGGT+AGG - chr5_3:1162483-1162502 Msa0790380:three_prime_UTR 40.0%
AATTTCTGCTCAGGTAGGTT+AGG - chr5_3:1162488-1162507 Msa0790380:three_prime_UTR 40.0%
!! ACCATTTTGGTCTTTGACCT+TGG - chr5_3:1162809-1162828 Msa0790380:three_prime_UTR 40.0%
TCCAAGGTCAAAGACCAAAA+TGG + chr5_3:1162813-1162832 Msa0790370:CDS 40.0%
!! ATTTTGGTCTTTGACCTTGG+AGG - chr5_3:1162812-1162831 Msa0790380:three_prime_UTR 40.0%
! TTTTGATGTCTCAGTGCTTG+AGG - chr5_3:1162841-1162860 Msa0790380:three_prime_UTR 40.0%
! TTTGAAGTGCTCTCTACTTC+TGG - chr5_3:1162878-1162897 Msa0790380:three_prime_UTR 40.0%
TACTTCTGGTGATACACACT+TGG - chr5_3:1162892-1162911 Msa0790380:three_prime_UTR 40.0%
ACTTCTGGTGATACACACTT+GGG - chr5_3:1162893-1162912 Msa0790380:three_prime_UTR 40.0%
!! GGGTGGTGATGATTTTGATA+AGG - chr5_3:1162913-1162932 Msa0790380:three_prime_UTR 40.0%
! GAGCTTGTTTGTCCTTCAAA+AGG + chr5_3:1163091-1163110 Msa0790370:CDS 40.0%
!! TTTAGCTTTCTCAGCTGTCT+CGG + chr5_3:1163126-1163145 Msa0790370:CDS 40.0%
GACAGCTGAGAAAGCTAAAA+TGG - chr5_3:1163127-1163146 Msa0790380:three_prime_UTR 40.0%
CCTGATGTTTGTTTGAGTGA+GGG + chr5_3:1163162-1163181 Msa0790370:CDS 40.0%
ACCTGATGTTTGTTTGAGTG+AGG + chr5_3:1163163-1163182 Msa0790370:CDS 40.0%
GAGTGGTCTCAATATGTTTG+GGG + chr5_3:1163322-1163341 Msa0790370:CDS 40.0%
GAGCTTGTAAAGAAGATGAC+TGG - chr5_3:1163662-1163681 Msa0790380:intron 40.0%
CTGGATTGACAGTGACATTT+GGG + chr5_3:1163694-1163713 None:intergenic 40.0%
TCTGGATTGACAGTGACATT+TGG + chr5_3:1163695-1163714 None:intergenic 40.0%
GGAGAGAATGATGTTTCTCT+GGG - chr5_3:1163827-1163846 Msa0790380:intron 40.0%
! ATTGATTTAGGCTGGTGTCT+TGG - chr5_3:1163904-1163923 Msa0790380:intron 40.0%
AGATGTTTCTCCATTGTCCT+TGG - chr5_3:1163955-1163974 Msa0790380:intron 40.0%
GATGTTTCTCCATTGTCCTT+GGG - chr5_3:1163956-1163975 Msa0790380:intron 40.0%
!! GAAAACCTCTGATTTTGAGG+TGG + chr5_3:1164038-1164057 None:intergenic 40.0%
! GGAGAAAACCTCTGATTTTG+AGG + chr5_3:1164041-1164060 None:intergenic 40.0%
! AGGGTGAGAGAGAATTTGTT+AGG - chr5_3:1164104-1164123 Msa0790380:intron 40.0%
!! GGGTGAGAGAGAATTTGTTA+GGG - chr5_3:1164105-1164124 Msa0790380:intron 40.0%
TCGAACTTCACTTCAATCTG+CGG + chr5_3:1164190-1164209 None:intergenic 40.0%
ATATACCTCATCACTAGGCA+AGG + chr5_3:1164299-1164318 None:intergenic 40.0%
TATCTGCTTACTACTTCTGG+AGG - chr5_3:1164361-1164380 Msa0790380:three_prime_UTR 40.0%
!! TTGTTACTCCAGCATTGATG+TGG - chr5_3:1164390-1164409 Msa0790380:three_prime_UTR 40.0%
!! TGTTACTCCAGCATTGATGT+GGG - chr5_3:1164391-1164410 Msa0790380:three_prime_UTR 40.0%
! TGGATGATATACAGGTTGAG+AGG - chr5_3:1164443-1164462 Msa0790380:three_prime_UTR 40.0%
! TGATATACAGGTTGAGAGGA+TGG - chr5_3:1164447-1164466 Msa0790380:three_prime_UTR 40.0%
! TGAGGCTGAGAGATTTTCAA+AGG - chr5_3:1164474-1164493 Msa0790380:three_prime_UTR 40.0%
! GAGATTTTCAAAGGAGGACA+AGG - chr5_3:1164483-1164502 Msa0790380:three_prime_UTR 40.0%
TGCAATAGACACAAAGAACC+AGG - chr5_3:1164516-1164535 Msa0790380:three_prime_UTR 40.0%
AATAGACACAAAGAACCAGG+CGG - chr5_3:1164519-1164538 Msa0790380:three_prime_UTR 40.0%
CTTTCAATTGCTTCTCAGTC+TGG + chr5_3:1164558-1164577 None:intergenic 40.0%
GAGAAGCAATTGAAAGAGCT+AGG - chr5_3:1164562-1164581 Msa0790380:three_prime_UTR 40.0%
! CTTCCACCTTTTCTTTCACA+GGG + chr5_3:1164603-1164622 None:intergenic 40.0%
CTGCATAACTTCCTGATTGA+GGG + chr5_3:1164695-1164714 None:intergenic 40.0%
AATCAGGAAGTTATGCAGCT+TGG - chr5_3:1164697-1164716 Msa0790380:exon 40.0%
CAGTCTCTATATAACCAACC+TGG - chr5_3:1164721-1164740 Msa0790380:CDS 40.0%
! TTGCCTGATGATGATTCTGA+GGG + chr5_3:1164793-1164812 None:intergenic 40.0%
TCAGAATCATCATCAGGCAA+GGG - chr5_3:1164793-1164812 Msa0790380:CDS 40.0%
! ATTTTTGTCAATGGAGAGCG+AGG - chr5_3:1164926-1164945 Msa0790380:CDS 40.0%
! TTTTTGTCAATGGAGAGCGA+GGG - chr5_3:1164927-1164946 Msa0790380:CDS 40.0%
GTATAAAGGATTGTCACGAC+TGG - chr5_3:1165173-1165192 Msa0790380:intron 40.0%
ACAAATTACCATTAGCGAGC+CGG - chr5_3:1165275-1165294 Msa0790380:CDS 40.0%
! CTTTTTAACATTCACGCTCG+AGG - chr5_3:1165309-1165328 Msa0790380:CDS 40.0%
TCCAATTCCTCTTGGTATTC+TGG - chr5_3:1165340-1165359 Msa0790380:CDS 40.0%
ACCAGAATACCAAGAGGAAT+TGG + chr5_3:1165344-1165363 None:intergenic 40.0%
AACACAATATCCACACCATC+TGG + chr5_3:1165371-1165390 None:intergenic 40.0%
AAAATAGCGTAGAGCATGCT+AGG - chr5_3:1165701-1165720 Msa0790380:intron 40.0%
TGATTCCGATGTTGGAGAAT+TGG + chr5_3:1165749-1165768 None:intergenic 40.0%
GAAGTCCCAGAATGTCTATA+TGG + chr5_3:1165974-1165993 None:intergenic 40.0%
!! TATAGACATTCTGGGACTTC+GGG - chr5_3:1165974-1165993 Msa0790380:CDS 40.0%
ACATAAAGCGTATGCATACC+AGG + chr5_3:1166045-1166064 None:intergenic 40.0%
TGGTATGCATACGCTTTATG+TGG - chr5_3:1166044-1166063 Msa0790380:intron 40.0%
ACAGATAATAGCAGCAGTAG+GGG + chr5_3:1166101-1166120 None:intergenic 40.0%
GACAGATAATAGCAGCAGTA+GGG + chr5_3:1166102-1166121 None:intergenic 40.0%
TGACAGATAATAGCAGCAGT+AGG + chr5_3:1166103-1166122 None:intergenic 40.0%
TCAGACCCATACAAGAACAA+GGG + chr5_3:1166190-1166209 None:intergenic 40.0%
TTCAGACCCATACAAGAACA+AGG + chr5_3:1166191-1166210 None:intergenic 40.0%
TGTATGGGTCTGAATGCAAT+AGG - chr5_3:1166197-1166216 Msa0790380:CDS 40.0%
GTATGGGTCTGAATGCAATA+GGG - chr5_3:1166198-1166217 Msa0790380:CDS 40.0%
TATGGGTCTGAATGCAATAG+GGG - chr5_3:1166199-1166218 Msa0790380:CDS 40.0%
GTTTGCATCAGTTAAAGGGT+AGG + chr5_3:1166367-1166386 None:intergenic 40.0%
! TGATGCAAACCATGATGGAA+GGG - chr5_3:1166377-1166396 Msa0790380:intron 40.0%
TCTGTGTTCGTATGCTTATC+TGG - chr5_3:1166404-1166423 Msa0790380:CDS 40.0%
CTGTGTTCGTATGCTTATCT+GGG - chr5_3:1166405-1166424 Msa0790380:CDS 40.0%
TGTGTTCGTATGCTTATCTG+GGG - chr5_3:1166406-1166425 Msa0790380:CDS 40.0%
!! ATTTCCTTCGAAGCCACTTT+TGG + chr5_3:1166600-1166619 None:intergenic 40.0%
TAAAAATGCACGAAGCAACG+GGG - chr5_3:1166619-1166638 Msa0790380:intron 40.0%
! TCTTTGCAGTTATGGTGGAA+AGG + chr5_3:1166987-1167006 None:intergenic 40.0%
! ACCCCTCAAAAGTGTAACAA+TGG - chr5_3:1167076-1167095 Msa0790380:CDS 40.0%
TCAATTTGGTTAGGGGAAGT+TGG + chr5_3:1167264-1167283 None:intergenic 40.0%
ATTATTAGGGTCCTGCTAAC+CGG - chr5_3:1167324-1167343 Msa0790380:CDS 40.0%
TCCTCTTTGGATTCCAAAAG+AGG - chr5_3:1167710-1167729 Msa0790380:five_prime_UTR 40.0%
TTTGGATTCCAAAAGAGGCA+TGG - chr5_3:1167715-1167734 Msa0790380:five_prime_UTR 40.0%
! AATGAATGCCATGCCTCTTT+TGG + chr5_3:1167726-1167745 None:intergenic 40.0%
CATTACTGGATTGCATTGGA+TGG - chr5_3:1167742-1167761 Msa0790380:five_prime_UTR 40.0%
!! GTTTTGGTGAGAGGATGGAT+AGG + chr5_3:1161776-1161795 Msa0790370:five_prime_UTR 45.0%
CCCTTCCACTTCTATCCATT+TGG - chr5_3:1161855-1161874 Msa0790380:three_prime_UTR 45.0%
CAACTCCCCAAATTAGGGTT+AGG - chr5_3:1161909-1161928 Msa0790380:three_prime_UTR 45.0%
! TCAAGTGCTGCCCAAATACA+CGG - chr5_3:1161958-1161977 Msa0790380:three_prime_UTR 45.0%
GAAACCAAGGCCGTGTATTT+GGG + chr5_3:1161971-1161990 Msa0790370:five_prime_UTR 45.0%
AGAAACCAAGGCCGTGTATT+TGG + chr5_3:1161972-1161991 Msa0790370:five_prime_UTR 45.0%
GAGACGGTTACCGAAGAAAA+GGG + chr5_3:1162046-1162065 Msa0790370:five_prime_UTR 45.0%
TGAGACGGTTACCGAAGAAA+AGG + chr5_3:1162047-1162066 Msa0790370:five_prime_UTR 45.0%
GGTGGATAATTTGGGGAATG+CGG + chr5_3:1162097-1162116 Msa0790370:five_prime_UTR 45.0%
GAAGGTGAAAGGCTTTCTGT+TGG + chr5_3:1162118-1162137 Msa0790370:five_prime_UTR 45.0%
TTTCTCATTGACGACACGGA+AGG + chr5_3:1162136-1162155 Msa0790370:five_prime_UTR 45.0%
TTGGTGTAAGCAACAACGGA+GGG + chr5_3:1162258-1162277 Msa0790370:five_prime_UTR 45.0%
!! ACAGAGAAGAAGGTGTTCTC+GGG + chr5_3:1162333-1162352 Msa0790370:five_prime_UTR 45.0%
!! CACAGAGAAGAAGGTGTTCT+CGG + chr5_3:1162334-1162353 Msa0790370:five_prime_UTR 45.0%
ACACCTTCTTCTCTGTGAAG+AGG - chr5_3:1162337-1162356 Msa0790380:three_prime_UTR 45.0%
GAACCTCTTCACAGAGAAGA+AGG + chr5_3:1162343-1162362 Msa0790370:five_prime_UTR 45.0%
CTGTGAAGAGGTTCATTGGT+AGG - chr5_3:1162349-1162368 Msa0790380:three_prime_UTR 45.0%
CATTGGTAGGAAGATGTCTG+AGG - chr5_3:1162362-1162381 Msa0790380:three_prime_UTR 45.0%
TTCACAAAGGACTGCTACCA+AGG - chr5_3:1162691-1162710 Msa0790380:intron 45.0%
CCTTTCGAAACCATAAGCCA+AGG + chr5_3:1162777-1162796 Msa0790370:CDS 45.0%
CCTTGGCTTATGGTTTCGAA+AGG - chr5_3:1162774-1162793 Msa0790380:three_prime_UTR 45.0%
!! CATCAAAAGTACCACCTCCA+AGG + chr5_3:1162829-1162848 Msa0790370:CDS 45.0%
! AGAGTTGTTGATTGGTTGGC+TGG - chr5_3:1163038-1163057 Msa0790380:three_prime_UTR 45.0%
GGAGACTTCAAGAGAGATGA+AGG - chr5_3:1163059-1163078 Msa0790380:three_prime_UTR 45.0%
CCCTCACTCAAACAAACATC+AGG - chr5_3:1163159-1163178 Msa0790380:three_prime_UTR 45.0%
TCTGCTGTGGCAGTTATGAA+CGG + chr5_3:1163296-1163315 Msa0790370:CDS 45.0%
TTCATAACTGCCACAGCAGA+TGG - chr5_3:1163296-1163315 Msa0790380:three_prime_UTR 45.0%
GATGAGGTGATTCTTGTTGG+TGG - chr5_3:1163614-1163633 Msa0790380:intron 45.0%
TTACAAGCTCCTGAACAGCA+GGG + chr5_3:1163652-1163671 Msa0790370:three_prime_UTR 45.0%
TTTACAAGCTCCTGAACAGC+AGG + chr5_3:1163653-1163672 Msa0790370:three_prime_UTR 45.0%
CACTGTCAATCCAGATGAAG+TGG - chr5_3:1163700-1163719 Msa0790380:intron 45.0%
CGGTTTAGCTGTTCTCATCA+AGG - chr5_3:1163748-1163767 Msa0790380:intron 45.0%
GGGAGAGAATGATGTTTCTC+TGG - chr5_3:1163826-1163845 Msa0790380:intron 45.0%
TTCTCCATTGTCCTTGGGTT+TGG - chr5_3:1163961-1163980 Msa0790380:intron 45.0%
GTTTCCAAACCCAAGGACAA+TGG + chr5_3:1163968-1163987 None:intergenic 45.0%
TCCTTGGGTTTGGAAACTCT+AGG - chr5_3:1163971-1163990 Msa0790380:intron 45.0%
ACCTAGAGTTTCCAAACCCA+AGG + chr5_3:1163975-1163994 None:intergenic 45.0%
TTGGGTTTGGAAACTCTAGG+TGG - chr5_3:1163974-1163993 Msa0790380:intron 45.0%
TGGGTTTGGAAACTCTAGGT+GGG - chr5_3:1163975-1163994 Msa0790380:intron 45.0%
!!! CTCTGATTTTGAGGTGGGAA+GGG + chr5_3:1164032-1164051 None:intergenic 45.0%
CAAATTCTCTCTCACCCTGA+AGG + chr5_3:1164102-1164121 None:intergenic 45.0%
TCAGTTGCTGCCATAGACAA+GGG - chr5_3:1164232-1164251 Msa0790380:three_prime_UTR 45.0%
ATTGATGTGGGAAGCTGTTC+CGG - chr5_3:1164403-1164422 Msa0790380:three_prime_UTR 45.0%
! GGCTGAGAGATTTTCAAAGG+AGG - chr5_3:1164477-1164496 Msa0790380:three_prime_UTR 45.0%
AAAGGAGGACAAGGAGAAGA+GGG - chr5_3:1164492-1164511 Msa0790380:three_prime_UTR 45.0%
! GCTTCCACCTTTTCTTTCAC+AGG + chr5_3:1164604-1164623 None:intergenic 45.0%
AGAAAAGGTGGAAGCAAAGC+TGG - chr5_3:1164609-1164628 Msa0790380:three_prime_UTR 45.0%
GCTGCATAACTTCCTGATTG+AGG + chr5_3:1164696-1164715 None:intergenic 45.0%
! TGCCTGATGATGATTCTGAG+GGG + chr5_3:1164792-1164811 None:intergenic 45.0%
! CTTGCCTGATGATGATTCTG+AGG + chr5_3:1164794-1164813 None:intergenic 45.0%
CTCAGAATCATCATCAGGCA+AGG - chr5_3:1164792-1164811 Msa0790380:CDS 45.0%
GTGCTTCTTCCGTGCTAAAT+TGG - chr5_3:1164898-1164917 Msa0790380:CDS 45.0%
GACGCACGTTTCTGTATCTT+TGG - chr5_3:1164987-1165006 Msa0790380:CDS 45.0%
!! ATTGTCACGACTGGCTTGAT+TGG - chr5_3:1165182-1165201 Msa0790380:intron 45.0%
AACTCTGGTCCAATTCCTCT+TGG - chr5_3:1165332-1165351 Msa0790380:CDS 45.0%
GGAGAAACCAGAATACCAAG+AGG + chr5_3:1165350-1165369 None:intergenic 45.0%
!! GGTATTCTGGTTTCTCCAGA+TGG - chr5_3:1165353-1165372 Msa0790380:CDS 45.0%
AGGGCAGAGTTATTCATCAC+AGG + chr5_3:1165415-1165434 None:intergenic 45.0%
GTGCACTTTGATTCCGATGT+TGG + chr5_3:1165757-1165776 None:intergenic 45.0%
!! AGTTTGTTGTGAGAAGGGAG+AGG - chr5_3:1165929-1165948 Msa0790380:CDS 45.0%
!! ATAGACATTCTGGGACTTCG+GGG - chr5_3:1165975-1165994 Msa0790380:CDS 45.0%
TATGACCAACAGAGTCATCC+TGG - chr5_3:1166024-1166043 Msa0790380:intron 45.0%
TTTATGTGGTCTGTTTGCCG+TGG - chr5_3:1166058-1166077 Msa0790380:intron 45.0%
CAAGGGATAAACATGGGGAT+GGG + chr5_3:1166173-1166192 None:intergenic 45.0%
ACAAGGGATAAACATGGGGA+TGG + chr5_3:1166174-1166193 None:intergenic 45.0%
ATGGGTCTGAATGCAATAGG+GGG - chr5_3:1166200-1166219 Msa0790380:CDS 45.0%
! CTGATGCAAACCATGATGGA+AGG - chr5_3:1166376-1166395 Msa0790380:intron 45.0%
CGTGGTGCAAAATTAGACCT+GGG - chr5_3:1166458-1166477 Msa0790380:CDS 45.0%
GTGGTGCAAAATTAGACCTG+GGG - chr5_3:1166459-1166478 Msa0790380:CDS 45.0%
CGCTACATTGATGCCATCAA+TGG + chr5_3:1166500-1166519 None:intergenic 45.0%
!! ACAGATAGTGGATGTAGTCC+TGG - chr5_3:1166542-1166561 Msa0790380:intron 45.0%
TTGACCAAAAGTGGCTTCGA+AGG - chr5_3:1166593-1166612 Msa0790380:intron 45.0%
! GGATCTGAAGCACATGATTG+AGG + chr5_3:1166672-1166691 None:intergenic 45.0%
GGTGTCCGTTAGAACAAATG+AGG + chr5_3:1166693-1166712 None:intergenic 45.0%
ACCAATGCATCAAGCTCTTC+AGG - chr5_3:1166710-1166729 Msa0790380:CDS 45.0%
CCAATGCATCAAGCTCTTCA+GGG - chr5_3:1166711-1166730 Msa0790380:CDS 45.0%
! AGAGGTGGTGTTAAAGTACC+AGG + chr5_3:1166741-1166760 None:intergenic 45.0%
GATGAAAAAGGTGAGTGGCA+TGG + chr5_3:1166771-1166790 None:intergenic 45.0%
!!! GCCTCTTTTGGAATCCAAAG+AGG + chr5_3:1167714-1167733 None:intergenic 45.0%
! AGAGGCATGGCATTCATTAC+TGG - chr5_3:1167728-1167747 Msa0790380:five_prime_UTR 45.0%
ACTGGATTGCATTGGATGGA+TGG - chr5_3:1167746-1167765 Msa0790380:five_prime_UTR 45.0%
GGTGAGAGGATGGATAGGTT+TGG + chr5_3:1161771-1161790 Msa0790370:five_prime_UTR 50.0%
GTGTATTTGGGCAGCACTTG+AGG + chr5_3:1161959-1161978 Msa0790370:five_prime_UTR 50.0%
! TTCGGATTGGGGAGAAACCA+AGG + chr5_3:1161984-1162003 Msa0790370:five_prime_UTR 50.0%
GGTGAAAGGCTTTCTGTTGG+TGG + chr5_3:1162115-1162134 Msa0790370:five_prime_UTR 50.0%
TTGACGACACGGAAGGTGAA+AGG + chr5_3:1162129-1162148 Msa0790370:five_prime_UTR 50.0%
! CTTGGTGTAAGCAACAACGG+AGG + chr5_3:1162259-1162278 Msa0790370:five_prime_UTR 50.0%
GGTGTTCTCGGGATTAACGA+CGG + chr5_3:1162322-1162341 Msa0790370:five_prime_UTR 50.0%
TGAACCAACTGCTGCATCCT+TGG - chr5_3:1162757-1162776 Msa0790380:intron 50.0%
TAAGCCAAGGATGCAGCAGT+TGG + chr5_3:1162764-1162783 Msa0790370:intron 50.0%
ACTGCTGCATCCTTGGCTTA+TGG - chr5_3:1162764-1162783 Msa0790380:intron 50.0%
! TTGGTCTTTGACCTTGGAGG+TGG - chr5_3:1162815-1162834 Msa0790380:three_prime_UTR 50.0%
GATGTCTCAGTGCTTGAGGT+TGG - chr5_3:1162845-1162864 Msa0790380:three_prime_UTR 50.0%
!! TCAGTGCTTGAGGTTGGTGA+TGG - chr5_3:1162851-1162870 Msa0790380:three_prime_UTR 50.0%
TCTGGTGATACACACTTGGG+TGG - chr5_3:1162896-1162915 Msa0790380:three_prime_UTR 50.0%
AACACGTATCCCTGCTGTTC+AGG - chr5_3:1163640-1163659 Msa0790380:intron 50.0%
CAGATGAAGTGGTTGCCCTT+GGG - chr5_3:1163711-1163730 Msa0790380:intron 50.0%
AGATGAAGTGGTTGCCCTTG+GGG - chr5_3:1163712-1163731 Msa0790380:intron 50.0%
ATTTAGGCTGGTGTCTTGGC+TGG - chr5_3:1163908-1163927 Msa0790380:intron 50.0%
GGGTTTGGAAACTCTAGGTG+GGG - chr5_3:1163976-1163995 Msa0790380:intron 50.0%
GTGGGAAGGGTAGTGTTTCT+GGG + chr5_3:1164019-1164038 None:intergenic 50.0%
!!! CCTCTGATTTTGAGGTGGGA+AGG + chr5_3:1164033-1164052 None:intergenic 50.0%
CCTTCCCACCTCAAAATCAG+AGG - chr5_3:1164030-1164049 Msa0790380:intron 50.0%
!! ACTGGTTTGTCCATCAGCAG+CGG + chr5_3:1164065-1164084 None:intergenic 50.0%
! ATCTCTTGGTAGCTTCCGCT+TGG - chr5_3:1164135-1164154 Msa0790380:three_prime_UTR 50.0%
GTCAGTTGCTGCCATAGACA+AGG - chr5_3:1164231-1164250 Msa0790380:three_prime_UTR 50.0%
!! CAAGGTACTGGCACCAGTAA+TGG + chr5_3:1164281-1164300 None:intergenic 50.0%
CTCATCACTAGGCAAGGTAC+TGG + chr5_3:1164293-1164312 None:intergenic 50.0%
CAGTACCTTGCCTAGTGATG+AGG - chr5_3:1164291-1164310 Msa0790380:three_prime_UTR 50.0%
ACAGCTTCCCACATCAATGC+TGG + chr5_3:1164401-1164420 None:intergenic 50.0%
GGTTGAGAGGATGGTCAATG+AGG - chr5_3:1164456-1164475 Msa0790380:three_prime_UTR 50.0%
CAAAGGAGGACAAGGAGAAG+AGG - chr5_3:1164491-1164510 Msa0790380:three_prime_UTR 50.0%
!! GAGCTAGGAGAAAAGGTACC+TGG - chr5_3:1164577-1164596 Msa0790380:three_prime_UTR 50.0%
ACCTGGCCCTGTGAAAGAAA+AGG - chr5_3:1164594-1164613 Msa0790380:three_prime_UTR 50.0%
! ACCTTTTCTTTCACAGGGCC+AGG + chr5_3:1164598-1164617 None:intergenic 50.0%
TGGCCCTGTGAAAGAAAAGG+TGG - chr5_3:1164597-1164616 Msa0790380:three_prime_UTR 50.0%
! TCTGGTTTCTCCAGATGGTG+TGG - chr5_3:1165358-1165377 Msa0790380:CDS 50.0%
ACTCTGCCCTTGCAACCATT+AGG - chr5_3:1165425-1165444 Msa0790380:CDS 50.0%
!! TAGACATTCTGGGACTTCGG+GGG - chr5_3:1165976-1165995 Msa0790380:CDS 50.0%
GCATACCAGGATGACTCTGT+TGG + chr5_3:1166032-1166051 None:intergenic 50.0%
GGATAAACATGGGGATGGGA+AGG + chr5_3:1166169-1166188 None:intergenic 50.0%
TGGGTCTGAATGCAATAGGG+GGG - chr5_3:1166201-1166220 Msa0790380:CDS 50.0%
TGAATGCAATAGGGGGGTTG+TGG - chr5_3:1166207-1166226 Msa0790380:CDS 50.0%
GCGTGGTGCAAAATTAGACC+TGG - chr5_3:1166457-1166476 Msa0790380:CDS 50.0%
AATTAGACCTGGGGCTTGTG+CGG - chr5_3:1166468-1166487 Msa0790380:CDS 50.0%
TGTGCGGACGATTCCATTGA+TGG - chr5_3:1166484-1166503 Msa0790380:CDS 50.0%
!! GATAGTGGATGTAGTCCTGG+TGG - chr5_3:1166545-1166564 Msa0790380:intron 50.0%
GAACATGATCGGCATGAGAC+CGG + chr5_3:1166650-1166669 None:intergenic 50.0%
CCCTGAAGAGCTTGATGCAT+TGG + chr5_3:1166714-1166733 None:intergenic 50.0%
AAGGTGAGTGGCATGGTTGA+TGG + chr5_3:1166764-1166783 None:intergenic 50.0%
GATGGGGTCCTCAAGTATGT+GGG + chr5_3:1166947-1166966 None:intergenic 50.0%
CACATACTTGAGGACCCCAT+CGG - chr5_3:1166946-1166965 Msa0790380:intron 50.0%
TTCTACCACGATCCTCCGAT+GGG + chr5_3:1166964-1166983 None:intergenic 50.0%
ATGCTTAACCAGTGCCCCAA+GGG + chr5_3:1167352-1167371 None:intergenic 50.0%
TATGCTTAACCAGTGCCCCA+AGG + chr5_3:1167353-1167372 None:intergenic 50.0%
AGGTTTGCCACCTTCCATGG+CGG + chr5_3:1162199-1162218 Msa0790370:five_prime_UTR 55.0%
GGTAGGTTTGCCACCTTCCA+TGG + chr5_3:1162202-1162221 Msa0790370:five_prime_UTR 55.0%
!! TCGGCGTTGGTGATGATGGT+AGG + chr5_3:1162219-1162238 Msa0790370:five_prime_UTR 55.0%
ACCATCATCACCAACGCCGA+AGG - chr5_3:1162219-1162238 Msa0790380:three_prime_UTR 55.0%
!! ACCTTCGGCGTTGGTGATGA+TGG + chr5_3:1162223-1162242 Msa0790370:five_prime_UTR 55.0%
GTAAGCAACAACGGAGGGAG+TGG + chr5_3:1162253-1162272 Msa0790370:five_prime_UTR 55.0%
AAGAACGGCGACAGACTCGT+CGG - chr5_3:1162276-1162295 Msa0790380:three_prime_UTR 55.0%
ATTAACGACGGCCTGACGCT+TGG + chr5_3:1162310-1162329 Msa0790370:five_prime_UTR 55.0%
AGGACTGCTACCAAGGATGC+AGG - chr5_3:1162698-1162717 Msa0790380:intron 55.0%
AGCAATCCTGCCTGCATCCT+TGG + chr5_3:1162711-1162730 Msa0790370:intron 55.0%
AAGGATGCAGGCAGGATTGC+TGG - chr5_3:1162710-1162729 Msa0790380:intron 55.0%
! ATGTTTGGGGCCATCTGCTG+TGG + chr5_3:1163309-1163328 Msa0790370:CDS 55.0%
CCAAGGGCAACCACTTCATC+TGG + chr5_3:1163713-1163732 None:intergenic 55.0%
CCAGATGAAGTGGTTGCCCT+TGG - chr5_3:1163710-1163729 Msa0790380:intron 55.0%
GGTGGGAAGGGTAGTGTTTC+TGG + chr5_3:1164020-1164039 None:intergenic 55.0%
! GTTTTCTCCACCGCTGCTGA+TGG - chr5_3:1164052-1164071 Msa0790380:intron 55.0%
! CTTGGTAGCTTCCGCTTGGA+CGG - chr5_3:1164139-1164158 Msa0790380:three_prime_UTR 55.0%
CAGGAGGAATACCGTCCAAG+CGG + chr5_3:1164153-1164172 None:intergenic 55.0%
TTCAATCTGCGGAACCCCAC+GGG + chr5_3:1164179-1164198 None:intergenic 55.0%
CTTCAATCTGCGGAACCCCA+CGG + chr5_3:1164180-1164199 None:intergenic 55.0%
! CTGCCATAGACAAGGGCACA+GGG - chr5_3:1164239-1164258 Msa0790380:three_prime_UTR 55.0%
CTTCCCTGTGCCCTTGTCTA+TGG + chr5_3:1164245-1164264 None:intergenic 55.0%
! CAAGGGCACAGGGAAGAAAC+AGG - chr5_3:1164249-1164268 Msa0790380:three_prime_UTR 55.0%
TTCCTGATTGAGGGCAGCCA+TGG + chr5_3:1164686-1164705 None:intergenic 55.0%
GGCCCCTCAGAATCATCATC+AGG - chr5_3:1164787-1164806 Msa0790380:CDS 55.0%
TCATCAGGCAAGGGAGCAGA+TGG - chr5_3:1164802-1164821 Msa0790380:CDS 55.0%
CATCAGGCAAGGGAGCAGAT+GGG - chr5_3:1164803-1164822 Msa0790380:CDS 55.0%
ATCAGGCAAGGGAGCAGATG+GGG - chr5_3:1164804-1164823 Msa0790380:CDS 55.0%
!! CGACTGGCTTGATTGGACGA+CGG - chr5_3:1165189-1165208 Msa0790380:intron 55.0%
! ACTGCTTTCCGGCTCGCTAA+TGG + chr5_3:1165286-1165305 None:intergenic 55.0%
CATTCACGCTCGAGGAACTC+TGG - chr5_3:1165317-1165336 Msa0790380:CDS 55.0%
CAGCAGCAGCAGCATGATCA+TGG + chr5_3:1166257-1166276 None:intergenic 55.0%
TTGGGCGAGCTTCTCACTCT+TGG - chr5_3:1166332-1166351 Msa0790380:intron 55.0%
ACAGACTCGCCCTTCCATCA+TGG + chr5_3:1166389-1166408 None:intergenic 55.0%
GGTGAAGAACATGCAGAGCG+TGG - chr5_3:1166440-1166459 Msa0790380:CDS 55.0%
CAAATGCAAGGGCAACCACC+AGG + chr5_3:1166563-1166582 None:intergenic 55.0%
CAAGCTCTTCAGGGATCACC+TGG - chr5_3:1166720-1166739 Msa0790380:CDS 55.0%
!! TGGCATGGTTGATGGAGAGG+TGG + chr5_3:1166756-1166775 None:intergenic 55.0%
!! GAGTGGCATGGTTGATGGAG+AGG + chr5_3:1166759-1166778 None:intergenic 55.0%
CGATGGGGTCCTCAAGTATG+TGG + chr5_3:1166948-1166967 None:intergenic 55.0%
ATACTTGAGGACCCCATCGG+AGG - chr5_3:1166949-1166968 Msa0790380:intron 55.0%
TCTACCACGATCCTCCGATG+GGG + chr5_3:1166963-1166982 None:intergenic 55.0%
GTTCTACCACGATCCTCCGA+TGG + chr5_3:1166965-1166984 None:intergenic 55.0%
TTAACTAGTGTCCGGGGCAC+CGG - chr5_3:1167484-1167503 Msa0790380:CDS 55.0%
GCTGCCCAAATACACGGCCT+TGG - chr5_3:1161964-1161983 Msa0790380:three_prime_UTR 60.0%
ATTTGGGGAATGCGGCGCGA+GGG + chr5_3:1162089-1162108 Msa0790370:five_prime_UTR 60.0%
AATTTGGGGAATGCGGCGCG+AGG + chr5_3:1162090-1162109 Msa0790370:five_prime_UTR 60.0%
GGGAGTGGTACGCTGACCTT+CGG + chr5_3:1162238-1162257 Msa0790370:five_prime_UTR 60.0%
GACGAGTCTGTCGCCGTTCT+TGG + chr5_3:1162277-1162296 Msa0790370:five_prime_UTR 60.0%
CGGTCAGATTGCCAAGCGTC+AGG - chr5_3:1162296-1162315 Msa0790380:three_prime_UTR 60.0%
CTGCTACCAAGGATGCAGGC+AGG - chr5_3:1162702-1162721 Msa0790380:intron 60.0%
GACCTGAACTGCAGCCCCAA+GGG + chr5_3:1163729-1163748 None:intergenic 60.0%
CTTGGGGCTGCAGTTCAGGT+CGG - chr5_3:1163728-1163747 Msa0790380:intron 60.0%
GGTTTGTCCATCAGCAGCGG+TGG + chr5_3:1164062-1164081 None:intergenic 60.0%
GTATTCCTCCTGCTCCCCGT+GGG - chr5_3:1164161-1164180 Msa0790380:three_prime_UTR 60.0%
TATTCCTCCTGCTCCCCGTG+GGG - chr5_3:1164162-1164181 Msa0790380:three_prime_UTR 60.0%
TCAATCTGCGGAACCCCACG+GGG + chr5_3:1164178-1164197 None:intergenic 60.0%
! GCTGCCATAGACAAGGGCAC+AGG - chr5_3:1164238-1164257 Msa0790380:three_prime_UTR 60.0%
GGTAGACAACAGAGTCCGCC+TGG + chr5_3:1164537-1164556 None:intergenic 60.0%
TGCCATGGCTGCCCTCAATC+AGG - chr5_3:1164681-1164700 Msa0790380:three_prime_UTR 60.0%
CTGCATCTGCAGCTCCAGGT+TGG + chr5_3:1164738-1164757 None:intergenic 60.0%
GACTCGCTACCAGGTGGTGT+AGG + chr5_3:1164766-1164785 None:intergenic 60.0%
! ACACCACCTGGTAGCGAGTC+TGG - chr5_3:1164766-1164785 Msa0790380:CDS 60.0%
!! CATTCTGGGACTTCGGGGGA+CGG - chr5_3:1165980-1165999 Msa0790380:CDS 60.0%
CTGCTGCTGCTGCTGCTGTT+GGG - chr5_3:1166265-1166284 Msa0790380:intron 60.0%
TGCTGCTGCTGCTGCTGTTG+GGG - chr5_3:1166266-1166285 Msa0790380:intron 60.0%
CATGATCGGCATGAGACCGG+AGG + chr5_3:1166647-1166666 None:intergenic 60.0%
TCTCCCCGCCCACATACTTG+AGG - chr5_3:1166936-1166955 Msa0790380:CDS 60.0%
GGTCCTCAAGTATGTGGGCG+GGG + chr5_3:1166942-1166961 None:intergenic 60.0%
GGGTCCTCAAGTATGTGGGC+GGG + chr5_3:1166943-1166962 None:intergenic 60.0%
GGGGTCCTCAAGTATGTGGG+CGG + chr5_3:1166944-1166963 None:intergenic 60.0%
TCCTGCTAACCGGTGCCCTT+GGG - chr5_3:1167334-1167353 Msa0790380:CDS 60.0%
GGAAATGCTAACCGGTGCCC+CGG + chr5_3:1167498-1167517 None:intergenic 60.0%
AAATTCCGCCGTCGCCGCCA+TGG - chr5_3:1162182-1162201 Msa0790380:three_prime_UTR 65.0%
GGTACGCTGACCTTCGGCGT+TGG + chr5_3:1162232-1162251 Msa0790370:five_prime_UTR 65.0%
TGCCCTTGGGGCTGCAGTTC+AGG - chr5_3:1163724-1163743 Msa0790380:intron 65.0%
CGACCTGAACTGCAGCCCCA+AGG + chr5_3:1163730-1163749 None:intergenic 65.0%
GGTATTCCTCCTGCTCCCCG+TGG - chr5_3:1164160-1164179 Msa0790380:three_prime_UTR 65.0%
CCTGCTGCATCTGCAGCTCC+AGG + chr5_3:1164742-1164761 None:intergenic 65.0%
CCTGGAGCTGCAGATGCAGC+AGG - chr5_3:1164739-1164758 Msa0790380:CDS 65.0%
GCAGCAGGACCTACACCACC+TGG - chr5_3:1164754-1164773 Msa0790380:CDS 65.0%
GCTGCTGCTGCTGCTGCTGT+TGG - chr5_3:1166264-1166283 Msa0790380:intron 65.0%
TGCTGCTGCTGCTGTTGGGG+TGG - chr5_3:1166269-1166288 Msa0790380:intron 65.0%
GAATCGTCCGCACAAGCCCC+AGG + chr5_3:1166478-1166497 None:intergenic 65.0%
ACGAAGCAACGGGGCTCCTC+CGG - chr5_3:1166628-1166647 Msa0790380:intron 65.0%
AGGACCCCATCGGAGGATCG+TGG - chr5_3:1166956-1166975 Msa0790380:intron 65.0%
GTCCTGCTAACCGGTGCCCT+TGG - chr5_3:1167333-1167352 Msa0790380:CDS 65.0%
CCTGCTAACCGGTGCCCTTG+GGG - chr5_3:1167335-1167354 Msa0790380:CDS 65.0%
! AACCAGTGCCCCAAGGGCAC+CGG + chr5_3:1167346-1167365 None:intergenic 65.0%
GAATGCGGCGCGAGGGAAGG+TGG + chr5_3:1162082-1162101 Msa0790370:five_prime_UTR 70.0%
ACCTTCCATGGCGGCGACGG+CGG + chr5_3:1162190-1162209 Msa0790370:five_prime_UTR 70.0%
GCCACCTTCCATGGCGGCGA+CGG + chr5_3:1162193-1162212 Msa0790370:five_prime_UTR 70.0%
GGGCCAGACTCGCTACCAGG+TGG + chr5_3:1164772-1164791 None:intergenic 70.0%
GAGGGGCCAGACTCGCTACC+AGG + chr5_3:1164775-1164794 None:intergenic 70.0%
CCTCGCGACGTCACCGTCTC+CGG + chr5_3:1166899-1166918 None:intergenic 70.0%
CGGAGACGGTGACGTCGCGA+GGG - chr5_3:1166897-1166916 Msa0790380:CDS 70.0%
!! CCCCAAGGGCACCGGTTAGC+AGG + chr5_3:1167338-1167357 None:intergenic 70.0%
AACCGGTGCCCTTGGGGCAC+TGG - chr5_3:1167341-1167360 Msa0790380:CDS 70.0%
GGGGAATGCGGCGCGAGGGA+AGG + chr5_3:1162085-1162104 Msa0790370:five_prime_UTR 75.0%
TCCGCCGTCGCCGCCATGGA+AGG - chr5_3:1162186-1162205 Msa0790380:three_prime_UTR 75.0%
GCCGTCGCCGCCATGGAAGG+TGG - chr5_3:1162189-1162208 Msa0790380:three_prime_UTR 75.0%
GGAACCCCACGGGGAGCAGG+AGG + chr5_3:1164169-1164188 None:intergenic 75.0%
TGCGGAACCCCACGGGGAGC+AGG + chr5_3:1164172-1164191 None:intergenic 75.0%
CCGGAGACGGTGACGTCGCG+AGG - chr5_3:1166896-1166915 Msa0790380:CDS 75.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 1161671 1167895 1161671 ID=Msa0790380;Name=Msa0790380
chr5_3 mRNA 1161671 1167895 1161671 ID=Msa0790380-mRNA-1;Parent=Msa0790380;Name=Msa0790380-mRNA-1;_AED=0.13;_eAED=0.13;_QI=278|1|1|1|0.75|0.66|9|2160|706
chr5_3 exon 1161671 1162666 1161671 ID=Msa0790380-mRNA-1:exon:405;Parent=Msa0790380-mRNA-1
chr5_3 exon 1162769 1163347 1162769 ID=Msa0790380-mRNA-1:exon:404;Parent=Msa0790380-mRNA-1
chr5_3 exon 1164120 1165109 1164120 ID=Msa0790380-mRNA-1:exon:403;Parent=Msa0790380-mRNA-1
chr5_3 exon 1165254 1165652 1165254 ID=Msa0790380-mRNA-1:exon:402;Parent=Msa0790380-mRNA-1
chr5_3 exon 1165821 1166010 1165821 ID=Msa0790380-mRNA-1:exon:401;Parent=Msa0790380-mRNA-1
chr5_3 exon 1166179 1166277 1166179 ID=Msa0790380-mRNA-1:exon:400;Parent=Msa0790380-mRNA-1
chr5_3 exon 1166386 1166528 1166386 ID=Msa0790380-mRNA-1:exon:399;Parent=Msa0790380-mRNA-1
chr5_3 exon 1166632 1166964 1166632 ID=Msa0790380-mRNA-1:exon:398;Parent=Msa0790380-mRNA-1
chr5_3 exon 1167066 1167895 1167066 ID=Msa0790380-mRNA-1:exon:397;Parent=Msa0790380-mRNA-1
chr5_3 five_prime_UTR 1167618 1167895 1167618 ID=Msa0790380-mRNA-1:five_prime_utr;Parent=Msa0790380-mRNA-1
chr5_3 CDS 1167066 1167617 1167066 ID=Msa0790380-mRNA-1:cds;Parent=Msa0790380-mRNA-1
chr5_3 CDS 1166632 1166964 1166632 ID=Msa0790380-mRNA-1:cds;Parent=Msa0790380-mRNA-1
chr5_3 CDS 1166386 1166528 1166386 ID=Msa0790380-mRNA-1:cds;Parent=Msa0790380-mRNA-1
chr5_3 CDS 1166179 1166277 1166179 ID=Msa0790380-mRNA-1:cds;Parent=Msa0790380-mRNA-1
chr5_3 CDS 1165821 1166010 1165821 ID=Msa0790380-mRNA-1:cds;Parent=Msa0790380-mRNA-1
chr5_3 CDS 1165254 1165652 1165254 ID=Msa0790380-mRNA-1:cds;Parent=Msa0790380-mRNA-1
chr5_3 CDS 1164705 1165109 1164705 ID=Msa0790380-mRNA-1:cds;Parent=Msa0790380-mRNA-1
chr5_3 three_prime_UTR 1164120 1164704 1164120 ID=Msa0790380-mRNA-1:three_prime_utr;Parent=Msa0790380-mRNA-1
chr5_3 three_prime_UTR 1162769 1163347 1162769 ID=Msa0790380-mRNA-1:three_prime_utr;Parent=Msa0790380-mRNA-1
chr5_3 three_prime_UTR 1161671 1162666 1161671 ID=Msa0790380-mRNA-1:three_prime_utr;Parent=Msa0790380-mRNA-1
Gene Sequence

>Msa0790380

ATGGCTTCCTCAAGTGCTGCCCAAATACACGGCCTTGGTTTCTCCCCAATCCGAAAACCTTCTTCTTCCACTTCCAATTCTTCCTATTCCAAAACCCTTTTCTTCGGTAACCGTCTCAATTCTAATCACGCCACCTTCCCTCGCGCCGCATTCCCCAAATTATCCACCAACAGAAAGCCTTTCACCTTCCGTGTCGTCAATGAGAAAGTTGTCGGTATCGATTTGGGTACTACAAATTCCGCCGTCGCCGCCATGGAAGGTGGCAAACCTACCATCATCACCAACGCCGAAGGTCAGCGTACCACTCCCTCCGTTGTTGCTTACACCAAGAACGGCGACAGACTCGTCGGTCAGATTGCCAAGCGTCAGGCCGTCGTTAATCCCGAGAACACCTTCTTCTCTGTGAAGAGGTTCATTGGTAGGAAGATGTCTGAGGTTGACGAAGAGTCTAAACAAGTCTCTTACAGAGTCATTAGAGACGATAACGGCAACGTCAAACTCGATTGTCCAGCTATTGGAAAATCATTTGCTGCTGAAGAAATTTCTGCTCAGGTCTTGAGGAAGCTTGTAGATGATGCTTCAAAGTTTTTGAATGATAAAGTAACTAAGGCTGTAGTCACTGTGCCTGCATACTTCAATGATTCACAAAGGACTGCTACCAAGGATGCAGGCAGGATTGCTGGTCTTGAAGTTCTTCGAATTATCAATGAACCAACTGCTGCATCCTTGGCTTATGGTTTCGAAAGGAAAAACAATGAAACCATTTTGGTCTTTGACCTTGGAGGTGGTACTTTTGATGTCTCAGTGCTTGAGGTTGGTGATGGAGTGTTTGAAGTGCTCTCTACTTCTGGTGATACACACTTGGGTGGTGATGATTTTGATAAGAGAGTTGTTGATTGGTTGGCTGGAGACTTCAAGAGAGATGAAGGTATAGACCTTTTGAAGGACAAACAAGCTCTTCAGCGTCTTACCGAGACAGCTGAGAAAGCTAAAATGGAGCTTTCATCCCTCACTCAAACAAACATCAGTTTGCCGTTCATAACTGCCACAGCAGATGGCCCCAAACATATTGAGACCACTCTTACAAGGGCTAAATTTGAGGAATTATGTTCAGATCTTCTTGACAGACTCAAGACACCAGTAGAAAATTCATTGAGGGATGCAAAACTCTCAATTAAGGATATTGATGAGGTGATTCTTGTTGGTGGATCAACACGTATCCCTGCTGTTCAGGAGCTTGTAAAGAAGATGACTGGAAAAGACCCAAATGTCACTGTCAATCCAGATGAAGTGGTTGCCCTTGGGGCTGCAGTTCAGGCTGGTGTCTTGGCTGGAGATGTCAGCGACATTGTACTGTTAGATGTTTCTCCATTGTCCTTGGGTTTGGAAACTCTAGGTGGGGTGATGACAAAAATTATTCCCAGAAACACTACCCTTCCCACCTCAAAATCAGAGGTTTTCTCCACCGCTGCTGATGGACAAACCAGTGTAGAAATTAATGTCCTTCAGGGTGAGAGAGAATTTGTTAGGGACAATAAATCTCTTGGTAGCTTCCGCTTGGACGGTATTCCTCCTGCTCCCCGTGGGGTTCCGCAGATTGAAGTGAAGTTCGACATTGATGCAAATGGCATTCTGTCAGTTGCTGCCATAGACAAGGGCACAGGGAAGAAACAGGATATTACCATTACTGGTGCCAGTACCTTGCCTAGTGATGAGGTTGAGAGGATGGTCAATGAGGCTGAGAGATTTTCAAAGGAGGACAAGGAGAAGAGGGATGCAATAGACACAAAGAACCAGGCGGACTCTGTTGTCTACCAGACTGAGAAGCAATTGAAAGAGCTAGGAGAAAAGGTACCTGGCCCTGTGAAAGAAAAGGTGGAAGCAAAGCTGGTAGAGCTTAAAGATGCTATTTCTGGTGGTTCGACCCAAACTATTAAAGATGCCATGGCTGCCCTCAATCAGGAAGTTATGCAGCTTGGACAGTCTCTATATAACCAACCTGGAGCTGCAGATGCAGCAGGACCTACACCACCTGGTAGCGAGTCTGGCCCCTCAGAATCATCATCAGGCAAGGGAGCAGATGGGGATGTGATTGATGCAGATTTTACTGACTCTAAATGA
Protein sequence

>Msa0790380

MASSSAAQIHGLGFSPIRKPSSSTSNSSYSKTLFFGNRLNSNHATFPRAAFPKLSTNRKPFTFRVVNEKVVGIDLGTTNSAVAAMEGGKPTIITNAEGQRTTPSVVAYTKNGDRLVGQIAKRQAVVNPENTFFSVKRFIGRKMSEVDEESKQVSYRVIRDDNGNVKLDCPAIGKSFAAEEISAQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKDAGRIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRVVDWLAGDFKRDEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLKTPVENSLRDAKLSIKDIDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQAGVLAGDVSDIVLLDVSPLSLGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAPRGVPQIEVKFDIDANGILSVAAIDKGTGKKQDITITGASTLPSDEVERMVNEAERFSKEDKEKRDAIDTKNQADSVVYQTEKQLKELGEKVPGPVKEKVEAKLVELKDAISGGSTQTIKDAMAALNQEVMQLGQSLYNQPGAADAAGPTPPGSESGPSESSSGKGADGDVIDADFTDSK*