AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0911710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0911710 MtrunA17_Chr6g0464561 93.333 345 6 1 1 345 1 328 0.0 653
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0911710 AT1G76730.1 70.255 353 91 3 6 344 2 354 1.09e-177 496

Find 95 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATTGGTCGACCATATT+TGG 0.146364 6_2:+18893900 None:intergenic
AAAGTAGATCTTATTGTTAT+TGG 0.152589 6_2:-18893862 Msa0911710:CDS
TAATGCTTGTGTTTCCATTT+TGG 0.166508 6_2:+18896614 None:intergenic
GTCAGATTTCTCACTCTTTC+AGG 0.185200 6_2:-18894852 Msa0911710:intron
ATATGGTATGTTGCGTTATA+TGG 0.257841 6_2:-18893079 Msa0911710:CDS
GGGTGATTAGAAAGAGGATA+TGG 0.270926 6_2:-18896362 Msa0911710:CDS
AGAGAAGCACCAACAAAATT+AGG 0.289230 6_2:+18896282 None:intergenic
ACTTGTTTCTGAGGAGAATC+TGG 0.290978 6_2:+18894873 None:intergenic
TCAAAAGGAAATGTTGTATA+AGG 0.317075 6_2:-18891341 Msa0911710:three_prime_UTR
ACAATAAGCAATATTTAGAT+TGG 0.317931 6_2:+18891275 None:intergenic
ATCACCCATTTCCAAGCTTT+CGG 0.323242 6_2:+18896378 None:intergenic
ATGTTACTAAATAGATTTCA+TGG 0.324786 6_2:-18891249 Msa0911710:three_prime_UTR
TTTCACCAACCTTGAGGCTT+TGG 0.328664 6_2:+18892378 None:intergenic
AAAGAGGATATGGGATTTGA+TGG 0.331100 6_2:-18896352 Msa0911710:CDS
CCTAATCGAGCACCTGTGTT+CGG 0.335307 6_2:+18893823 None:intergenic
CACTTCCATTTCATTCAAAC+TGG 0.336323 6_2:-18896532 Msa0911710:CDS
CTTCTATTTCTTTGAGCAGT+AGG 0.343528 6_2:+18891429 None:intergenic
TGAGTCAAATATGTTAACTT+TGG 0.344058 6_2:-18893959 Msa0911710:CDS
GAGTCAAATATGTTAACTTT+GGG 0.360873 6_2:-18893958 Msa0911710:CDS
GGATTTGCAGAACTTGAATA+TGG 0.362270 6_2:-18893096 Msa0911710:CDS
TGCTTCTCTTGCTGCTGATA+AGG 0.366298 6_2:-18896268 Msa0911710:intron
TTCTATTTCTTTGAGCAGTA+GGG 0.374520 6_2:+18891430 None:intergenic
GCCAAATATGGTCGACCAAT+TGG 0.376504 6_2:-18893901 Msa0911710:CDS
CTTCAATGAGGCTGCTTTCG+AGG 0.380498 6_2:-18896478 Msa0911710:CDS
AGGAAGCCTGTACTTCTGTT+GGG 0.384062 6_2:-18893927 Msa0911710:CDS
CTAATCGAGCACCTGTGTTC+GGG 0.385036 6_2:+18893824 None:intergenic
ATGATCCGAAAGCTTGGAAA+TGG 0.388819 6_2:-18896383 Msa0911710:CDS
TGCATCGCGGAACACATCTA+AGG 0.403429 6_2:+18894914 None:intergenic
TGCTTCAATTACTTAAGAAC+AGG 0.404325 6_2:+18891307 None:intergenic
GGCTTCCAGTTTGAATGAAA+TGG 0.406006 6_2:+18896527 None:intergenic
TCTGTTGGGGTTGCCAAATA+TGG 0.406711 6_2:-18893913 Msa0911710:CDS
TTTGTTGTTGTTGCTGTTGG+TGG 0.417134 6_2:+18896506 None:intergenic
AGCTTTGTTGTTGTTGCTGT+TGG 0.422102 6_2:+18896503 None:intergenic
CAATAAGCAATATTTAGATT+GGG 0.424533 6_2:+18891276 None:intergenic
TTAGGAATCCTATGATGAAC+AGG 0.427277 6_2:+18896300 None:intergenic
CTCGAAAGCAGCCTCATTGA+AGG 0.427405 6_2:+18896479 None:intergenic
GTGGAGAGAGAGCGGTAAAG+AGG 0.427620 6_2:+18896564 None:intergenic
CCGAACACAGGTGCTCGATT+AGG 0.445240 6_2:-18893823 Msa0911710:CDS
TAAAGAGGAGAGAGAGTGAA+TGG 0.446819 6_2:+18896579 None:intergenic
TGTTTAACATATACTTCAAA+AGG 0.447235 6_2:-18891356 Msa0911710:three_prime_UTR
TGCAGGATGATCCGAAAGCT+TGG 0.462695 6_2:-18896389 Msa0911710:CDS
TCGTCGAGCAATGGCGGTTG+AGG 0.465106 6_2:-18896427 Msa0911710:CDS
CTGGAATGTCATCCACCAAT+TGG 0.474668 6_2:+18892481 None:intergenic
ATCCTAGACCTGTTCATCAT+AGG 0.476390 6_2:-18896308 Msa0911710:CDS
AAATGGAAACACAAGCATTA+CGG 0.488225 6_2:-18896611 Msa0911710:CDS
CAGTTTGAATGAAATGGAAG+TGG 0.489259 6_2:+18896533 None:intergenic
GTTAACTTTGGGTACCATCA+AGG 0.493467 6_2:-18893947 Msa0911710:CDS
AAGGAAGCCTGTACTTCTGT+TGG 0.495849 6_2:-18893928 Msa0911710:CDS
TACAGTGCATGACTGCCAAT+TGG 0.497413 6_2:-18892496 Msa0911710:intron
ATCCTATGATGAACAGGTCT+AGG 0.500568 6_2:+18896306 None:intergenic
AGAAGTACAGGCTTCCTTGA+TGG 0.501762 6_2:+18893933 None:intergenic
CCAACCTTGAGGCTTTGGAA+TGG 0.506593 6_2:+18892383 None:intergenic
GGCAACCCCAACAGAAGTAC+AGG 0.513556 6_2:+18893921 None:intergenic
CGCAGAAGCTCGTCGAGCAA+TGG 0.514659 6_2:-18896436 Msa0911710:CDS
CCTCAACCACGGCTGAGGAC+AGG 0.514670 6_2:-18893997 Msa0911710:CDS
AGGATATGGGATTTGATGGA+AGG 0.523046 6_2:-18896348 Msa0911710:CDS
GGTGTACAAATGATATCTAC+TGG 0.525049 6_2:+18892432 None:intergenic
AGGAGGATTGAATTAGAGAC+TGG 0.525050 6_2:-18891489 Msa0911710:CDS
TCTATTTCTTTGAGCAGTAG+GGG 0.527550 6_2:+18891431 None:intergenic
CCTGTCCTCAGCCGTGGTTG+AGG 0.530300 6_2:+18893997 None:intergenic
ACTGGAAAGAAGCTTCCTAC+TGG 0.531355 6_2:-18891471 Msa0911710:CDS
TATGGTATGTTGCGTTATAT+GGG 0.539407 6_2:-18893078 Msa0911710:CDS
GGTGATTAGAAAGAGGATAT+GGG 0.539605 6_2:-18896361 Msa0911710:CDS
GGATATGGGATTTGATGGAA+GGG 0.547035 6_2:-18896347 Msa0911710:CDS
TCGACGAGCTTCTGCGTCGA+GGG 0.548360 6_2:+18896443 None:intergenic
GGAAGCCTGTACTTCTGTTG+GGG 0.552921 6_2:-18893926 Msa0911710:CDS
GGAGGAGAAATCTTCGATGC+AGG 0.557726 6_2:-18896406 Msa0911710:CDS
AAATAGATTTCATGGAGCTA+AGG 0.557860 6_2:-18891241 None:intergenic
TCAACACTAGTTGTTACCTC+AGG 0.563225 6_2:-18893042 Msa0911710:intron
TGATCCGAAAGCTTGGAAAT+GGG 0.564177 6_2:-18896382 Msa0911710:CDS
CACAGGTGCTCGATTAGGAA+AGG 0.564387 6_2:-18893818 Msa0911710:CDS
GGAAATGGGTGATTAGAAAG+AGG 0.564862 6_2:-18896368 Msa0911710:CDS
TGATATCTACTGGTACATCA+TGG 0.573249 6_2:+18892442 None:intergenic
TCGAGCAATGGCGGTTGAGG+AGG 0.573614 6_2:-18896424 Msa0911710:CDS
AGAAATCTGACTTGTTTCTG+AGG 0.583571 6_2:+18894864 None:intergenic
TATCATTTGTACACCAACTC+AGG 0.586302 6_2:-18892424 Msa0911710:CDS
AATTTCTCTGATGGACCAGT+AGG 0.587443 6_2:+18891456 None:intergenic
TAACTCCTCAACCACGGCTG+AGG 0.589739 6_2:-18894002 Msa0911710:CDS
ACAGGTGCTCGATTAGGAAA+GGG 0.589862 6_2:-18893817 Msa0911710:CDS
CTATTTCTTTGAGCAGTAGG+GGG 0.590448 6_2:+18891432 None:intergenic
ACATCCATTCCAAAGCCTCA+AGG 0.592719 6_2:-18892387 Msa0911710:intron
TGCTCGATTAGGAAAGGGAG+AGG 0.600130 6_2:-18893812 Msa0911710:intron
CAATGAGGCTGCTTTCGAGG+CGG 0.604639 6_2:-18896475 Msa0911710:CDS
AGTGCATGACTGCCAATTGG+TGG 0.605351 6_2:-18892493 Msa0911710:CDS
GTATACTTAGAGAGCTCAAG+AGG 0.606102 6_2:-18891509 Msa0911710:CDS
AGAAGCTCGTCGAGCAATGG+CGG 0.611097 6_2:-18896433 Msa0911710:CDS
GTCGCTGTTGACCCGAACAC+AGG 0.615234 6_2:-18893835 Msa0911710:CDS
ACTGCTCAAAGAAATAGAAG+AGG 0.621417 6_2:-18891426 Msa0911710:CDS
AGTTTGAATGAAATGGAAGT+GGG 0.628273 6_2:+18896534 None:intergenic
TACTTAGAGAGCTCAAGAGG+AGG 0.634181 6_2:-18891506 Msa0911710:CDS
CAACAAAGCTTCCTTCAATG+AGG 0.640413 6_2:-18896490 Msa0911710:CDS
AGGCTGCTTTCGAGGCGGAG+CGG 0.662213 6_2:-18896470 Msa0911710:CDS
CCGCGATGCACAATGTGTGA+AGG 0.680082 6_2:-18894901 Msa0911710:CDS
CCTTCACACATTGTGCATCG+CGG 0.691529 6_2:+18894901 None:intergenic
AATTGTTAACTCCTCAACCA+CGG 0.699483 6_2:-18894008 Msa0911710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATAGTTACAATAAA+AGG + chr6_2:18894636-18894655 None:intergenic 10.0%
!!! TGATTATGTAAAATTGATTT+TGG - chr6_2:18891873-18891892 Msa0911710:intron 15.0%
!! TTATTAGCATTATTAGATAT+AGG - chr6_2:18893168-18893187 Msa0911710:intron 15.0%
!!! CTCTTTGATTTTTAAATTAA+TGG - chr6_2:18893373-18893392 Msa0911710:intron 15.0%
!! ATAGTAAAGTAAAGTTAAAA+TGG + chr6_2:18893629-18893648 None:intergenic 15.0%
!! TAATTTCTATGGTATAAAAT+AGG + chr6_2:18894375-18894394 None:intergenic 15.0%
!! TTTATAATATTTAAACAAGC+AGG + chr6_2:18894555-18894574 None:intergenic 15.0%
!!! AAATATTTCTCTTATTTACA+AGG - chr6_2:18894983-18895002 Msa0911710:intron 15.0%
!!! TTTTGAAAAAAAATTCAAAC+AGG - chr6_2:18896260-18896279 Msa0911710:intron 15.0%
!!! TATTTTACTTAAAAGTGAGT+TGG - chr6_2:18891784-18891803 Msa0911710:intron 20.0%
!! AGAATTTATTCTAACATGTT+TGG + chr6_2:18892030-18892049 None:intergenic 20.0%
!!! TTATCAAAAATCTCATCTTT+TGG - chr6_2:18892244-18892263 Msa0911710:intron 20.0%
!! TTGTTACATCTAATATTCAA+GGG + chr6_2:18892341-18892360 None:intergenic 20.0%
!! TTTGTTACATCTAATATTCA+AGG + chr6_2:18892342-18892361 None:intergenic 20.0%
!! TTGAATATTAGATGTAACAA+AGG - chr6_2:18892341-18892360 Msa0911710:intron 20.0%
!! TGAATATTAGATGTAACAAA+GGG - chr6_2:18892342-18892361 Msa0911710:intron 20.0%
!! GAATTGAATTACATGATTAA+AGG - chr6_2:18892370-18892389 Msa0911710:intron 20.0%
!! AAAAAGATTCTTGAAAAGAT+AGG + chr6_2:18892421-18892440 None:intergenic 20.0%
!!! TATCTTTTCAAGAATCTTTT+TGG - chr6_2:18892420-18892439 Msa0911710:CDS 20.0%
!! TGCTAATAAAAATCAAATTG+TGG + chr6_2:18893157-18893176 None:intergenic 20.0%
!!! AGATTTTATATCATTTTTCG+TGG - chr6_2:18893587-18893606 Msa0911710:intron 20.0%
!! CAAAATTTCTGTTACATAAA+GGG + chr6_2:18893704-18893723 None:intergenic 20.0%
!! ACAAAATTTCTGTTACATAA+AGG + chr6_2:18893705-18893724 None:intergenic 20.0%
!! AAAGTAGATCTTATTGTTAT+TGG - chr6_2:18894005-18894024 Msa0911710:CDS 20.0%
!! ATAAGAATGAGTAATTTCTA+TGG + chr6_2:18894386-18894405 None:intergenic 20.0%
!! CTATTCTATACAATAACTAT+TGG + chr6_2:18894683-18894702 None:intergenic 20.0%
!!! CTTTTCAAAAACAAAATTTG+TGG + chr6_2:18894962-18894981 None:intergenic 20.0%
!!! CACAAATTTTGTTTTTGAAA+AGG - chr6_2:18894960-18894979 Msa0911710:intron 20.0%
!!! AATTAAGCAAACAAGTTTTT+AGG - chr6_2:18895612-18895631 Msa0911710:intron 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG + chr6_2:18896094-18896113 None:intergenic 20.0%
!!! TTTTACTACAGGAATTTATT+GGG - chr6_2:18896302-18896321 Msa0911710:CDS 20.0%
!!! ATAGTAAATATGAGTTTTGA+TGG - chr6_2:18896468-18896487 Msa0911710:CDS 20.0%
!! TGTTTAACATATACTTCAAA+AGG - chr6_2:18896511-18896530 Msa0911710:CDS 20.0%
!! CAATAAGCAATATTTAGATT+GGG + chr6_2:18896594-18896613 None:intergenic 20.0%
!! ACAATAAGCAATATTTAGAT+TGG + chr6_2:18896595-18896614 None:intergenic 20.0%
!! ATGTTACTAAATAGATTTCA+TGG - chr6_2:18896618-18896637 Msa0911710:exon 20.0%
!!! AGAATTGATTCTGACATTTT+TGG - chr6_2:18891708-18891727 Msa0911710:intron 25.0%
! ATAGAATCAATTCTACTCAA+CGG + chr6_2:18891737-18891756 None:intergenic 25.0%
! ATGTAAAGTGATTTATGTGT+TGG - chr6_2:18891807-18891826 Msa0911710:intron 25.0%
!! GGTTAAAAATGATTTGTGTT+TGG - chr6_2:18891894-18891913 Msa0911710:intron 25.0%
! TTAGAGTTTAGACGATAAAA+TGG + chr6_2:18892303-18892322 None:intergenic 25.0%
!! TTTGAGATTACGAATCAAAT+TGG + chr6_2:18892483-18892502 None:intergenic 25.0%
!!! CATCTTTTTTGGTGAAATTT+CGG - chr6_2:18892846-18892865 Msa0911710:intron 25.0%
!!! TGTTATTTGTGATTTTGAGT+AGG - chr6_2:18892892-18892911 Msa0911710:intron 25.0%
! TAGGAATTAATTGATGTGTA+TGG - chr6_2:18892911-18892930 Msa0911710:intron 25.0%
! AGGAATTAATTGATGTGTAT+GGG - chr6_2:18892912-18892931 Msa0911710:intron 25.0%
! ATGTTCTAACAATCAAATTG+TGG + chr6_2:18893233-18893252 None:intergenic 25.0%
!! GTAAGATCTTTTCAATATGA+AGG - chr6_2:18893253-18893272 Msa0911710:intron 25.0%
! AATTACAGGAATAAGAGATT+AGG - chr6_2:18893333-18893352 Msa0911710:intron 25.0%
! TTTACAACTTATAGCATGTT+TGG + chr6_2:18893568-18893587 None:intergenic 25.0%
!! ATAGATGCCTTTTAGATTTA+TGG - chr6_2:18893647-18893666 Msa0911710:intron 25.0%
! TCTATAACTTTCATTTCAGT+TGG + chr6_2:18893746-18893765 None:intergenic 25.0%
! TGAGTCAAATATGTTAACTT+TGG - chr6_2:18893908-18893927 Msa0911710:CDS 25.0%
! GAGTCAAATATGTTAACTTT+GGG - chr6_2:18893909-18893928 Msa0911710:CDS 25.0%
!! ATCTTTTCATCTAATCCAAT+TGG + chr6_2:18893984-18894003 None:intergenic 25.0%
! ATAACCATAGGAAATGTAAA+AGG + chr6_2:18894093-18894112 None:intergenic 25.0%
! GATTGATTAAACATAACCAT+AGG + chr6_2:18894105-18894124 None:intergenic 25.0%
!! TTTTCCTGTTATTCATCAAA+AGG - chr6_2:18894133-18894152 Msa0911710:intron 25.0%
!! CCAAGAAAAATTGAACTTTT+AGG + chr6_2:18894314-18894333 None:intergenic 25.0%
!! CCTAAAAGTTCAATTTTTCT+TGG - chr6_2:18894311-18894330 Msa0911710:intron 25.0%
!! ATGTAACATTCAAGTTCATA+AGG + chr6_2:18894726-18894745 None:intergenic 25.0%
! CATAAACAATGATTAAAGCA+TGG + chr6_2:18894936-18894955 None:intergenic 25.0%
! ACTCTTCTACCATAAAAATT+GGG + chr6_2:18895143-18895162 None:intergenic 25.0%
!! CTTATTTCCATAAGCTTTTT+AGG - chr6_2:18895739-18895758 Msa0911710:intron 25.0%
!! CTTTTACTACAGGAATTTAT+TGG - chr6_2:18896301-18896320 Msa0911710:CDS 25.0%
! AAATTGTCTCCTGAAAAATT+GGG - chr6_2:18896327-18896346 Msa0911710:CDS 25.0%
! TCAAAAGGAAATGTTGTATA+AGG - chr6_2:18896526-18896545 Msa0911710:CDS 25.0%
! AATGCTTGTGTTTCCATTTT+GGG + chr6_2:18891255-18891274 None:intergenic 30.0%
! TAATGCTTGTGTTTCCATTT+TGG + chr6_2:18891256-18891275 None:intergenic 30.0%
AAATGGAAACACAAGCATTA+CGG - chr6_2:18891256-18891275 Msa0911710:three_prime_UTR 30.0%
AGTTTGAATGAAATGGAAGT+GGG + chr6_2:18891336-18891355 None:intergenic 30.0%
! CATAGGATTCCTAATTTTGT+TGG - chr6_2:18891576-18891595 Msa0911710:intron 30.0%
! GTTGAGTAGAATTGATTCTA+TGG - chr6_2:18891736-18891755 Msa0911710:intron 30.0%
TCTATCAAAATCAACTCTCT+TGG + chr6_2:18891851-18891870 None:intergenic 30.0%
GAAGTGTATGATACTTTCTT+AGG + chr6_2:18892615-18892634 None:intergenic 30.0%
! TCCTGTTATTTATGAAAGCT+AGG - chr6_2:18892791-18892810 Msa0911710:intron 30.0%
!!! TCCTTCTGATTCATCTTTTT+TGG - chr6_2:18892835-18892854 Msa0911710:intron 30.0%
ACCAAAAAAGATGAATCAGA+AGG + chr6_2:18892839-18892858 None:intergenic 30.0%
!!! TTTTTTGGTGAAATTTCGGT+AGG - chr6_2:18892850-18892869 Msa0911710:intron 30.0%
!! TTTTTGGTGAAATTTCGGTA+GGG - chr6_2:18892851-18892870 Msa0911710:intron 30.0%
GGTTAGATAGGTACTTTATT+TGG - chr6_2:18893036-18893055 Msa0911710:intron 30.0%
! CTTTATTTGGAGTTTGTGTA+TGG - chr6_2:18893049-18893068 Msa0911710:CDS 30.0%
AACAAGTCAACAATCACAAA+AGG + chr6_2:18893117-18893136 None:intergenic 30.0%
TTTAGAAACAAAAGTTCCCA+AGG - chr6_2:18893465-18893484 Msa0911710:intron 30.0%
GCAATCACCATAAATCTAAA+AGG + chr6_2:18893657-18893676 None:intergenic 30.0%
TTTAGATTTATGGTGATTGC+TGG - chr6_2:18893657-18893676 Msa0911710:intron 30.0%
!!! CGATTTTTTTCTTCTCGTTT+TGG - chr6_2:18893793-18893812 Msa0911710:intron 30.0%
! TGATCCTTTTGATGAATAAC+AGG + chr6_2:18894140-18894159 None:intergenic 30.0%
CTTAACAACACTATTGACAT+AGG + chr6_2:18894164-18894183 None:intergenic 30.0%
ATCTAACACGTATGTGAAAT+CGG - chr6_2:18894239-18894258 Msa0911710:intron 30.0%
TAGGTTAAAAGACCAGTTTA+AGG + chr6_2:18894356-18894375 None:intergenic 30.0%
GTAGTATGATCATAAAACGT+AGG + chr6_2:18894441-18894460 None:intergenic 30.0%
TCAAGATCAAAATCCTACTT+AGG + chr6_2:18894480-18894499 None:intergenic 30.0%
AATGTTACATCAACTAAGAG+AGG - chr6_2:18894736-18894755 Msa0911710:intron 30.0%
ATATGGTATGTTGCGTTATA+TGG - chr6_2:18894788-18894807 Msa0911710:intron 30.0%
TATGGTATGTTGCGTTATAT+GGG - chr6_2:18894789-18894808 Msa0911710:intron 30.0%
AACAATGATTAAAGCATGGA+AGG + chr6_2:18894932-18894951 None:intergenic 30.0%
GACTCTTCTACCATAAAAAT+TGG + chr6_2:18895144-18895163 None:intergenic 30.0%
! TTTTTATGGTAGAAGAGTCT+AGG - chr6_2:18895145-18895164 Msa0911710:intron 30.0%
AGTGAAATCTCTTCTTTACA+AGG - chr6_2:18895174-18895193 Msa0911710:intron 30.0%
AAGAACCAAAACAGGATTAA+AGG + chr6_2:18895240-18895259 None:intergenic 30.0%
AATCAAACAAGAACCAAAAC+AGG + chr6_2:18895248-18895267 None:intergenic 30.0%
TTTGTAAAAATGACCTGAGT+TGG + chr6_2:18895459-18895478 None:intergenic 30.0%
!! AACAAGTTTTTAGGCTTGAT+TGG - chr6_2:18895621-18895640 Msa0911710:intron 30.0%
AAGCTATCCTAAAAAGCTTA+TGG + chr6_2:18895749-18895768 None:intergenic 30.0%
AAAGGTCAAGTTTGGATAAA+CGG + chr6_2:18895891-18895910 None:intergenic 30.0%
AAACTTATGAAGCACGAATA+CGG - chr6_2:18896027-18896046 Msa0911710:intron 30.0%
! CAACTTACTTCTTTTACTAC+AGG - chr6_2:18896291-18896310 Msa0911710:CDS 30.0%
CAAATTGTCTCCTGAAAAAT+TGG - chr6_2:18896326-18896345 Msa0911710:CDS 30.0%
! TTCTATTTCTTTGAGCAGTA+GGG + chr6_2:18896440-18896459 None:intergenic 30.0%
TGCTTCAATTACTTAAGAAC+AGG + chr6_2:18896563-18896582 None:intergenic 30.0%
CAGTTTGAATGAAATGGAAG+TGG + chr6_2:18891337-18891356 None:intergenic 35.0%
CACTTCCATTTCATTCAAAC+TGG - chr6_2:18891335-18891354 Msa0911710:three_prime_UTR 35.0%
GGTGATTAGAAAGAGGATAT+GGG - chr6_2:18891506-18891525 Msa0911710:CDS 35.0%
AAAGAGGATATGGGATTTGA+TGG - chr6_2:18891515-18891534 Msa0911710:CDS 35.0%
TTAGGAATCCTATGATGAAC+AGG + chr6_2:18891570-18891589 None:intergenic 35.0%
!! AGAGAAGCACCAACAAAATT+AGG + chr6_2:18891588-18891607 None:intergenic 35.0%
GAAGTGGAATCGAACATATA+CGG - chr6_2:18892080-18892099 Msa0911710:intron 35.0%
GATTCTTGAAAAGATAGGCA+TGG + chr6_2:18892416-18892435 None:intergenic 35.0%
GAAGTTCTGTAGCGTATTTA+AGG + chr6_2:18892455-18892474 None:intergenic 35.0%
GTGAATGATGTTCAGTTAAC+CGG + chr6_2:18892538-18892557 None:intergenic 35.0%
AGTTTCTTCCTTCATACTGT+TGG - chr6_2:18892589-18892608 Msa0911710:intron 35.0%
ATAAAACACCAACAGAAACC+TGG + chr6_2:18892678-18892697 None:intergenic 35.0%
! GCCTAGCTTTCATAAATAAC+AGG + chr6_2:18892795-18892814 None:intergenic 35.0%
! TATGGGTTTTTATGCAGATG+AGG - chr6_2:18892929-18892948 Msa0911710:intron 35.0%
! ATGGGTTTTTATGCAGATGA+GGG - chr6_2:18892930-18892949 Msa0911710:intron 35.0%
!! AGAAATCTGACTTGTTTCTG+AGG + chr6_2:18893006-18893025 None:intergenic 35.0%
GGAAATAGCAGAAGAGTAAA+AGG - chr6_2:18893189-18893208 Msa0911710:intron 35.0%
!! GAAGGTATCTATGACTATGA+TGG - chr6_2:18893271-18893290 Msa0911710:intron 35.0%
CAGCAACACAAAAGAATTAC+AGG - chr6_2:18893319-18893338 Msa0911710:intron 35.0%
TCAAAGAGTAGACACTTTAG+AGG + chr6_2:18893361-18893380 None:intergenic 35.0%
AAGCGAATCACTCAATTTAG+AGG - chr6_2:18893420-18893439 Msa0911710:intron 35.0%
GTTTCTAAACACTCTTGTTC+TGG + chr6_2:18893454-18893473 None:intergenic 35.0%
!! ATGTTTGGAATTGCTTTTGG+AGG + chr6_2:18893553-18893572 None:intergenic 35.0%
!! AGCATGTTTGGAATTGCTTT+TGG + chr6_2:18893556-18893575 None:intergenic 35.0%
ACGATCAATATTTGTGCAGA+TGG - chr6_2:18893831-18893850 Msa0911710:CDS 35.0%
AATTGTTAACTCCTCAACCA+CGG - chr6_2:18893859-18893878 Msa0911710:CDS 35.0%
! AACGCCTTTTACATTTCCTA+TGG - chr6_2:18894086-18894105 Msa0911710:intron 35.0%
AATTGCTAAGATTGCGAGAT+TGG - chr6_2:18894273-18894292 Msa0911710:intron 35.0%
TACTCATTCTTATGCAAGAC+TGG - chr6_2:18894393-18894412 Msa0911710:intron 35.0%
AAATCCTACTTAGGATCATG+AGG + chr6_2:18894471-18894490 None:intergenic 35.0%
GCTTGTGCGATATTAGATAT+TGG + chr6_2:18894586-18894605 None:intergenic 35.0%
GGATTTGCAGAACTTGAATA+TGG - chr6_2:18894771-18894790 Msa0911710:intron 35.0%
! GTTGTTACCTCAGGTAATTT+TGG - chr6_2:18894834-18894853 Msa0911710:intron 35.0%
! TGTTGTTTACAGAAAGTGAC+TGG - chr6_2:18895112-18895131 Msa0911710:intron 35.0%
TTCTACCATAAAAATTGGGC+TGG + chr6_2:18895139-18895158 None:intergenic 35.0%
TCTCTTCTTTACAAGGACAA+CGG - chr6_2:18895181-18895200 Msa0911710:intron 35.0%
AAAACAGGATTAAAGGACAG+GGG + chr6_2:18895233-18895252 None:intergenic 35.0%
CAAAACAGGATTAAAGGACA+GGG + chr6_2:18895234-18895253 None:intergenic 35.0%
! TGGATTAACAGCTTTTCAAC+TGG + chr6_2:18895408-18895427 None:intergenic 35.0%
TGATATCTACTGGTACATCA+TGG + chr6_2:18895428-18895447 None:intergenic 35.0%
GGTGTACAAATGATATCTAC+TGG + chr6_2:18895438-18895457 None:intergenic 35.0%
TATCATTTGTACACCAACTC+AGG - chr6_2:18895443-18895462 Msa0911710:intron 35.0%
! GAAATTTTTCACCAACCTTG+AGG + chr6_2:18895498-18895517 None:intergenic 35.0%
CAATCAAAGAAGCTTGTAGA+AGG + chr6_2:18895559-18895578 None:intergenic 35.0%
AACACAAACAATCTCACAAG+TGG + chr6_2:18895679-18895698 None:intergenic 35.0%
CAAAACGAAAAGGTCAAGTT+TGG + chr6_2:18895899-18895918 None:intergenic 35.0%
!! CTTGACCTTTTCGTTTTGTT+CGG - chr6_2:18895901-18895920 Msa0911710:intron 35.0%
TCTCAAATTATTAGCGGTGT+CGG + chr6_2:18896088-18896107 None:intergenic 35.0%
! CGAATTTGTCCCAATTTTTC+AGG + chr6_2:18896339-18896358 None:intergenic 35.0%
! TCTATTTCTTTGAGCAGTAG+GGG + chr6_2:18896439-18896458 None:intergenic 35.0%
! CTTCTATTTCTTTGAGCAGT+AGG + chr6_2:18896441-18896460 None:intergenic 35.0%
ACTGCTCAAAGAAATAGAAG+AGG - chr6_2:18896441-18896460 Msa0911710:CDS 35.0%
TAAAGAGGAGAGAGAGTGAA+TGG + chr6_2:18891291-18891310 None:intergenic 40.0%
!!! AATGGAAGTGGGTTGTTTTG+TGG + chr6_2:18891325-18891344 None:intergenic 40.0%
GGCTTCCAGTTTGAATGAAA+TGG + chr6_2:18891343-18891362 None:intergenic 40.0%
!! TTTGTTGTTGTTGCTGTTGG+TGG + chr6_2:18891364-18891383 None:intergenic 40.0%
!! AGCTTTGTTGTTGTTGCTGT+TGG + chr6_2:18891367-18891386 None:intergenic 40.0%
CAACAAAGCTTCCTTCAATG+AGG - chr6_2:18891377-18891396 Msa0911710:three_prime_UTR 40.0%
ATGATCCGAAAGCTTGGAAA+TGG - chr6_2:18891484-18891503 Msa0911710:CDS 40.0%
TGATCCGAAAGCTTGGAAAT+GGG - chr6_2:18891485-18891504 Msa0911710:CDS 40.0%
ATCACCCATTTCCAAGCTTT+CGG + chr6_2:18891492-18891511 None:intergenic 40.0%
GGAAATGGGTGATTAGAAAG+AGG - chr6_2:18891499-18891518 Msa0911710:CDS 40.0%
GGGTGATTAGAAAGAGGATA+TGG - chr6_2:18891505-18891524 Msa0911710:CDS 40.0%
AGGATATGGGATTTGATGGA+AGG - chr6_2:18891519-18891538 Msa0911710:CDS 40.0%
GGATATGGGATTTGATGGAA+GGG - chr6_2:18891520-18891539 Msa0911710:CDS 40.0%
ATCCTAGACCTGTTCATCAT+AGG - chr6_2:18891559-18891578 Msa0911710:intron 40.0%
ATCCTATGATGAACAGGTCT+AGG + chr6_2:18891564-18891583 None:intergenic 40.0%
AATTCTAGTCTCTCGAGAAG+TGG + chr6_2:18891694-18891713 None:intergenic 40.0%
GATTCTATGGTGACAGAGAT+TGG - chr6_2:18891749-18891768 Msa0911710:intron 40.0%
GACTTGATTCTACTTGAAGC+TGG + chr6_2:18891994-18892013 None:intergenic 40.0%
TACACCTCCAGAATCAATTC+TGG - chr6_2:18892049-18892068 Msa0911710:intron 40.0%
! TGACCAACCAGAATTGATTC+TGG + chr6_2:18892059-18892078 None:intergenic 40.0%
! AATTCTGGTTGGTCAAGAAG+TGG - chr6_2:18892064-18892083 Msa0911710:intron 40.0%
TTCTTAGGCCAACAGTATGA+AGG + chr6_2:18892600-18892619 None:intergenic 40.0%
GCTGAACACATTAGAATGAC+TGG + chr6_2:18892637-18892656 None:intergenic 40.0%
CGCTACAAATGCTCTAATCA+CGG + chr6_2:18892761-18892780 None:intergenic 40.0%
! CGTGATTAGAGCATTTGTAG+CGG - chr6_2:18892759-18892778 Msa0911710:intron 40.0%
!! ACTTGTTTCTGAGGAGAATC+TGG + chr6_2:18892997-18893016 None:intergenic 40.0%
GTCAGATTTCTCACTCTTTC+AGG - chr6_2:18893015-18893034 Msa0911710:intron 40.0%
!! CTCACTCTTTCAGGTTAGAT+AGG - chr6_2:18893024-18893043 Msa0911710:intron 40.0%
! TTTGTGTATGGTGTTGAGCA+GGG - chr6_2:18893061-18893080 Msa0911710:CDS 40.0%
ATCACTCAATTTAGAGGAGC+CGG - chr6_2:18893426-18893445 Msa0911710:intron 40.0%
! AAACACTCTTGTTCTGGATC+CGG + chr6_2:18893448-18893467 None:intergenic 40.0%
TCAGAGAACTCTTCATCTTG+AGG + chr6_2:18893515-18893534 None:intergenic 40.0%
TTTGGAGGATGCTGAACATT+TGG + chr6_2:18893538-18893557 None:intergenic 40.0%
GTTAACTTTGGGTACCATCA+AGG - chr6_2:18893920-18893939 Msa0911710:CDS 40.0%
TCCAATTGGTCGACCATATT+TGG + chr6_2:18893970-18893989 None:intergenic 40.0%
! TTTTACGAACTTACAGCCAC+TGG - chr6_2:18894213-18894232 Msa0911710:intron 40.0%
TTTACGAACTTACAGCCACT+GGG - chr6_2:18894214-18894233 Msa0911710:intron 40.0%
! CGCTAATCGATTCCTTAAAC+TGG - chr6_2:18894341-18894360 Msa0911710:intron 40.0%
TACTTAGGATCATGAGGAAG+AGG + chr6_2:18894465-18894484 None:intergenic 40.0%
TCTTCCTCATGATCCTAAGT+AGG - chr6_2:18894464-18894483 Msa0911710:intron 40.0%
TAAGAGAGGATTGAAGTGCA+GGG - chr6_2:18894750-18894769 Msa0911710:intron 40.0%
TCAACACTAGTTGTTACCTC+AGG - chr6_2:18894825-18894844 Msa0911710:intron 40.0%
GCAAGAACCAAAATTACCTG+AGG + chr6_2:18894844-18894863 None:intergenic 40.0%
TTTCCTTAGCCATTCCTCAA+AGG - chr6_2:18894874-18894893 Msa0911710:CDS 40.0%
! TTTGAGAAGCCTTTGAGGAA+TGG + chr6_2:18894886-18894905 None:intergenic 40.0%
! ACATCTTTGAGAAGCCTTTG+AGG + chr6_2:18894891-18894910 None:intergenic 40.0%
TGGTTGAACATATTCGACGT+TGG - chr6_2:18895076-18895095 Msa0911710:intron 40.0%
! GGGAAGATATCGGAACATTT+TGG + chr6_2:18895213-18895232 None:intergenic 40.0%
TAAAGGACAGGGGAAGATAT+CGG + chr6_2:18895223-18895242 None:intergenic 40.0%
CCAAAACAGGATTAAAGGAC+AGG + chr6_2:18895235-18895254 None:intergenic 40.0%
! CCTGTCCTTTAATCCTGTTT+TGG - chr6_2:18895232-18895251 Msa0911710:intron 40.0%
CAAAGAAGCTTGTAGAAGGA+AGG + chr6_2:18895555-18895574 None:intergenic 40.0%
CCATACCGAACAAAACGAAA+AGG + chr6_2:18895909-18895928 None:intergenic 40.0%
!! CCTTTTCGTTTTGTTCGGTA+TGG - chr6_2:18895906-18895925 Msa0911710:intron 40.0%
! TTTTGTTCGGTATGGCTCAT+AGG - chr6_2:18895914-18895933 Msa0911710:intron 40.0%
GCACAAACACTCTTCAGATT+AGG + chr6_2:18896178-18896197 None:intergenic 40.0%
GTATACTTAGAGAGCTCAAG+AGG - chr6_2:18896358-18896377 Msa0911710:CDS 40.0%
AGGAGGATTGAATTAGAGAC+TGG - chr6_2:18896378-18896397 Msa0911710:CDS 40.0%
! AATTTCTCTGATGGACCAGT+AGG + chr6_2:18896414-18896433 None:intergenic 40.0%
! CTATTTCTTTGAGCAGTAGG+GGG + chr6_2:18896438-18896457 None:intergenic 40.0%
!! GTTGTTTTGTGGAGAGAGAG+CGG + chr6_2:18891314-18891333 None:intergenic 45.0%
TGCTTCTCTTGCTGCTGATA+AGG - chr6_2:18891599-18891618 Msa0911710:intron 45.0%
! CCAACCAGAATTGATTCTGG+AGG + chr6_2:18892056-18892075 None:intergenic 45.0%
CCTCCAGAATCAATTCTGGT+TGG - chr6_2:18892053-18892072 Msa0911710:intron 45.0%
!! TGAAGTATTGACACCAGACC+AGG - chr6_2:18892657-18892676 Msa0911710:intron 45.0%
! ACGGATTGCGCTTAACAATC+TGG + chr6_2:18892742-18892761 None:intergenic 45.0%
! GTTTGTGTATGGTGTTGAGC+AGG - chr6_2:18893060-18893079 Msa0911710:CDS 45.0%
AGGGTCTAGTCTAATACAGC+AGG + chr6_2:18893685-18893704 None:intergenic 45.0%
! AGAAGTACAGGCTTCCTTGA+TGG + chr6_2:18893937-18893956 None:intergenic 45.0%
AAGGAAGCCTGTACTTCTGT+TGG - chr6_2:18893939-18893958 Msa0911710:CDS 45.0%
AGGAAGCCTGTACTTCTGTT+GGG - chr6_2:18893940-18893959 Msa0911710:CDS 45.0%
TCTGTTGGGGTTGCCAAATA+TGG - chr6_2:18893954-18893973 Msa0911710:CDS 45.0%
GCCAAATATGGTCGACCAAT+TGG - chr6_2:18893966-18893985 Msa0911710:CDS 45.0%
ACAGGTGCTCGATTAGGAAA+GGG - chr6_2:18894050-18894069 Msa0911710:intron 45.0%
GAGAACATTGTCTGTGATCC+TGG - chr6_2:18894498-18894517 Msa0911710:intron 45.0%
CTGGTTAGAAAAGTCTGCCT+CGG - chr6_2:18894517-18894536 Msa0911710:intron 45.0%
CGTGAAACAAGACTCAGTGT+CGG + chr6_2:18894612-18894631 None:intergenic 45.0%
!! CGACACTGAGTCTTGTTTCA+CGG - chr6_2:18894610-18894629 Msa0911710:intron 45.0%
CTAAGAGAGGATTGAAGTGC+AGG - chr6_2:18894749-18894768 Msa0911710:intron 45.0%
! AAGCCTTTGAGGAATGGCTA+AGG + chr6_2:18894880-18894899 None:intergenic 45.0%
! CTGGTCCAGCCCAATTTTTA+TGG - chr6_2:18895131-18895150 Msa0911710:intron 45.0%
TACAGTGCATGACTGCCAAT+TGG - chr6_2:18895371-18895390 Msa0911710:intron 45.0%
CTGGAATGTCATCCACCAAT+TGG + chr6_2:18895389-18895408 None:intergenic 45.0%
ACATCCATTCCAAAGCCTCA+AGG - chr6_2:18895480-18895499 Msa0911710:intron 45.0%
TTTCACCAACCTTGAGGCTT+TGG + chr6_2:18895492-18895511 None:intergenic 45.0%
!! GCTCATAGGCATTGACAAGT+GGG - chr6_2:18895928-18895947 Msa0911710:intron 45.0%
GTCAATATCCGTATCGTGTC+CGG + chr6_2:18896062-18896081 None:intergenic 45.0%
TACTTAGAGAGCTCAAGAGG+AGG - chr6_2:18896361-18896380 Msa0911710:CDS 45.0%
ACTGGAAAGAAGCTTCCTAC+TGG - chr6_2:18896396-18896415 Msa0911710:CDS 45.0%
GTAGGGGGTAATTTCTCTGA+TGG + chr6_2:18896423-18896442 None:intergenic 45.0%
!!! ATATGTAAAAATTATTATTT+TGG - chr6_2:18895056-18895075 Msa0911710:intron 5.0%
CTCGAAAGCAGCCTCATTGA+AGG + chr6_2:18891391-18891410 None:intergenic 50.0%
! CTTCAATGAGGCTGCTTTCG+AGG - chr6_2:18891389-18891408 Msa0911710:three_prime_UTR 50.0%
GGAGGAGAAATCTTCGATGC+AGG - chr6_2:18891461-18891480 Msa0911710:CDS 50.0%
TGCAGGATGATCCGAAAGCT+TGG - chr6_2:18891478-18891497 Msa0911710:CDS 50.0%
TGTAAGTTCTGCACTGTCGC+CGG - chr6_2:18892516-18892535 Msa0911710:intron 50.0%
ACACCAGACCAGGTTTCTGT+TGG - chr6_2:18892667-18892686 Msa0911710:intron 50.0%
ACACCAACAGAAACCTGGTC+TGG + chr6_2:18892673-18892692 None:intergenic 50.0%
GCGCTTAACAATCTGGACTC+TGG + chr6_2:18892735-18892754 None:intergenic 50.0%
AATTTCGGTAGGGCGTGGAA+TGG - chr6_2:18892861-18892880 Msa0911710:intron 50.0%
ATTTCGGTAGGGCGTGGAAT+GGG - chr6_2:18892862-18892881 Msa0911710:intron 50.0%
TGCATCGCGGAACACATCTA+AGG + chr6_2:18892956-18892975 None:intergenic 50.0%
CCTTCACACATTGTGCATCG+CGG + chr6_2:18892969-18892988 None:intergenic 50.0%
! TGTATGGTGTTGAGCAGGGA+GGG - chr6_2:18893065-18893084 Msa0911710:CDS 50.0%
AAAAAACCTGTCCTCAGCCG+TGG + chr6_2:18893879-18893898 None:intergenic 50.0%
GGAAGCCTGTACTTCTGTTG+GGG - chr6_2:18893941-18893960 Msa0911710:CDS 50.0%
CTAATCGAGCACCTGTGTTC+GGG + chr6_2:18894046-18894065 None:intergenic 50.0%
CCTAATCGAGCACCTGTGTT+CGG + chr6_2:18894047-18894066 None:intergenic 50.0%
CACAGGTGCTCGATTAGGAA+AGG - chr6_2:18894049-18894068 Msa0911710:intron 50.0%
TGCTCGATTAGGAAAGGGAG+AGG - chr6_2:18894055-18894074 Msa0911710:intron 50.0%
ATACGTGTTAGATCGCCCAG+TGG + chr6_2:18894232-18894251 None:intergenic 50.0%
! CGAGGCAGACTTTTCTAACC+AGG + chr6_2:18894519-18894538 None:intergenic 50.0%
AGTGCATGACTGCCAATTGG+TGG - chr6_2:18895374-18895393 Msa0911710:intron 50.0%
!! CCAACCTTGAGGCTTTGGAA+TGG + chr6_2:18895487-18895506 None:intergenic 50.0%
CCATTCCAAAGCCTCAAGGT+TGG - chr6_2:18895484-18895503 Msa0911710:intron 50.0%
!! GGCTCATAGGCATTGACAAG+TGG - chr6_2:18895927-18895946 Msa0911710:intron 50.0%
!! ATAGGCATTGACAAGTGGGC+AGG - chr6_2:18895932-18895951 Msa0911710:intron 50.0%
!! TAGGCATTGACAAGTGGGCA+GGG - chr6_2:18895933-18895952 Msa0911710:intron 50.0%
ACGAATACGGACACAGACAC+CGG - chr6_2:18896040-18896059 Msa0911710:intron 50.0%
TCTTCAGATTAGGCGTGTCC+CGG + chr6_2:18896168-18896187 None:intergenic 50.0%
GTGGAGAGAGAGCGGTAAAG+AGG + chr6_2:18891306-18891325 None:intergenic 55.0%
! CAATGAGGCTGCTTTCGAGG+CGG - chr6_2:18891392-18891411 Msa0911710:three_prime_UTR 55.0%
AGAAGCTCGTCGAGCAATGG+CGG - chr6_2:18891434-18891453 Msa0911710:CDS 55.0%
GGTGAAATTTCGGTAGGGCG+TGG - chr6_2:18892856-18892875 Msa0911710:intron 55.0%
CCGCGATGCACAATGTGTGA+AGG - chr6_2:18892966-18892985 Msa0911710:intron 55.0%
! GTGTATGGTGTTGAGCAGGG+AGG - chr6_2:18893064-18893083 Msa0911710:CDS 55.0%
! GTATGGTGTTGAGCAGGGAG+GGG - chr6_2:18893066-18893085 Msa0911710:CDS 55.0%
! TATGGTGTTGAGCAGGGAGG+GGG - chr6_2:18893067-18893086 Msa0911710:CDS 55.0%
TCAGCTTGAGCTGTCGCCTT+GGG + chr6_2:18893484-18893503 None:intergenic 55.0%
GACAGCTCAAGCTGAGGCAA+AGG - chr6_2:18893489-18893508 Msa0911710:intron 55.0%
TAACTCCTCAACCACGGCTG+AGG - chr6_2:18893865-18893884 Msa0911710:CDS 55.0%
! GGCAACCCCAACAGAAGTAC+AGG + chr6_2:18893949-18893968 None:intergenic 55.0%
CCGAACACAGGTGCTCGATT+AGG - chr6_2:18894044-18894063 Msa0911710:intron 55.0%
CATTGACAAGTGGGCAGGGT+TGG - chr6_2:18895937-18895956 Msa0911710:intron 55.0%
CACAGACACCGGACACGATA+CGG - chr6_2:18896051-18896070 Msa0911710:intron 55.0%
ACACGACAAGTGTCCGACAC+CGG - chr6_2:18896146-18896165 Msa0911710:intron 55.0%
TCGACGAGCTTCTGCGTCGA+GGG + chr6_2:18891427-18891446 None:intergenic 60.0%
CGCAGAAGCTCGTCGAGCAA+TGG - chr6_2:18891431-18891450 Msa0911710:CDS 60.0%
TCGTCGAGCAATGGCGGTTG+AGG - chr6_2:18891440-18891459 Msa0911710:CDS 60.0%
TCGAGCAATGGCGGTTGAGG+AGG - chr6_2:18891443-18891462 Msa0911710:CDS 60.0%
CTCAGCTTGAGCTGTCGCCT+TGG + chr6_2:18893485-18893504 None:intergenic 60.0%
CAAGGCGACAGCTCAAGCTG+AGG - chr6_2:18893483-18893502 Msa0911710:intron 60.0%
GTCGCTGTTGACCCGAACAC+AGG - chr6_2:18894032-18894051 Msa0911710:intron 60.0%
CACGACAAGTGTCCGACACC+GGG - chr6_2:18896147-18896166 Msa0911710:intron 60.0%
GATTAGGCGTGTCCCGGTGT+CGG + chr6_2:18896162-18896181 None:intergenic 60.0%
! AGGCTGCTTTCGAGGCGGAG+CGG - chr6_2:18891397-18891416 Msa0911710:three_prime_UTR 65.0%
CTCGACGAGCTTCTGCGTCG+AGG + chr6_2:18891428-18891447 None:intergenic 65.0%
GTGTTGAGCAGGGAGGGGGA+AGG - chr6_2:18893071-18893090 Msa0911710:CDS 65.0%
CCTGTCCTCAGCCGTGGTTG+AGG + chr6_2:18893873-18893892 None:intergenic 65.0%
CCTCAACCACGGCTGAGGAC+AGG - chr6_2:18893870-18893889 Msa0911710:CDS 65.0%
GCAGGTGAAACAGCGTGCCG+AGG + chr6_2:18894537-18894556 None:intergenic 65.0%
GTGGGCAGGGTTGGAGACGT+AGG - chr6_2:18895946-18895965 Msa0911710:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 18891242 18896647 18891242 ID=Msa0911710;Name=Msa0911710
chr6_2 mRNA 18891242 18896647 18891242 ID=Msa0911710-mRNA-1;Parent=Msa0911710;Name=Msa0911710-mRNA-1;_AED=0.05;_eAED=0.05;_QI=16|1|1|1|1|1|6|180|345
chr6_2 exon 18891242 18891576 18891242 ID=Msa0911710-mRNA-1:exon:3891;Parent=Msa0911710-mRNA-1
chr6_2 exon 18892388 18892513 18892388 ID=Msa0911710-mRNA-1:exon:3890;Parent=Msa0911710-mRNA-1
chr6_2 exon 18893043 18893118 18893043 ID=Msa0911710-mRNA-1:exon:3889;Parent=Msa0911710-mRNA-1
chr6_2 exon 18893813 18894039 18893813 ID=Msa0911710-mRNA-1:exon:3888;Parent=Msa0911710-mRNA-1
chr6_2 exon 18894853 18894943 18894853 ID=Msa0911710-mRNA-1:exon:3887;Parent=Msa0911710-mRNA-1
chr6_2 exon 18896269 18896647 18896269 ID=Msa0911710-mRNA-1:exon:3886;Parent=Msa0911710-mRNA-1
chr6_2 five_prime_UTR 18896632 18896647 18896632 ID=Msa0911710-mRNA-1:five_prime_utr;Parent=Msa0911710-mRNA-1
chr6_2 CDS 18896269 18896631 18896269 ID=Msa0911710-mRNA-1:cds;Parent=Msa0911710-mRNA-1
chr6_2 CDS 18894853 18894943 18894853 ID=Msa0911710-mRNA-1:cds;Parent=Msa0911710-mRNA-1
chr6_2 CDS 18893813 18894039 18893813 ID=Msa0911710-mRNA-1:cds;Parent=Msa0911710-mRNA-1
chr6_2 CDS 18893043 18893118 18893043 ID=Msa0911710-mRNA-1:cds;Parent=Msa0911710-mRNA-1
chr6_2 CDS 18892388 18892513 18892388 ID=Msa0911710-mRNA-1:cds;Parent=Msa0911710-mRNA-1
chr6_2 CDS 18891422 18891576 18891422 ID=Msa0911710-mRNA-1:cds;Parent=Msa0911710-mRNA-1
chr6_2 three_prime_UTR 18891242 18891421 18891242 ID=Msa0911710-mRNA-1:three_prime_utr;Parent=Msa0911710-mRNA-1
Gene Sequence

>Msa0911710

ATGGAAACACAAGCATTACGGTTACGCTATCCATTCACTCTCTCTCCTCTTTACCGCTCTCTCTCCACAAAACAACCCACTTCCATTTCATTCAAACTGGAAGCCACCAACAGCAACAACAACAAAGCTTCCTTCAATGAGGCTGCTTTCGAGGCGGAGCGGCTCACCCTCGACGCAGAAGCTCGTCGAGCAATGGCGGTTGAGGAGGAGAAATCTTCGATGCAGGATGATCCGAAAGCTTGGAAATGGGTGATTAGAAAGAGGATATGGGATTTGATGGAAGGGAAGAATTTTGCTCAGAATCCTAGACCTGTTCATCATAGGATTCCTAATTTTGTTGGTGCTTCTCTTGCTGCTGATAAGATGAGGGCCTTAGATGTGTTCCGCGATGCACAATGTGTGAAGGTTAATCCAGATTCTCCTCAGAAACAAGTCAGATTTCTCACTCTTTCAGATGGAAAGAAATTGTTAACTCCTCAACCACGGCTGAGGACAGGTTTTTTCTCTGTAATTGAGTCAAATATGTTAACTTTGGGTACCATCAAGGAAGCCTGTACTTCTGTTGGGGTTGCCAAATATGGTCGACCAATTGGATTAGATGAAAAGATAAAAGTAGATCTTATTGTTATTGGATCTGTCGCTGTTGACCCGAACACAGGTGCTCGATTAGGAAAGGGAGAGGGATTTGCAGAACTTGAATATGGTATGTTGCGTTATATGGGAGCTATCGATGATTCAACACTAGTTGTTACCTCAGTGCATGACTGCCAATTGGTGGATGACATTCCAGTTGAAAAGCTGTTAATCCATGATGTACCAGTAGATATCATTTGTACACCAACTCAGGTCATTTTTACAAATACATCCATTCCAAAGCCTCAAGGAATTTATTGGGACAAATTGTCTCCTGAAAAATTGGGACAAATTCGTATACTTAGAGAGCTCAAGAGGAGGATTGAATTAGAGACTGGAAAGAAGCTTCCTACTGGTCCATCAGAGAAATTACCCCCTACTGCTCAAAGAAATAGAAGAGGTTAA

Protein sequence

>Msa0911710

METQALRLRYPFTLSPLYRSLSTKQPTSISFKLEATNSNNNKASFNEAAFEAERLTLDAEARRAMAVEEEKSSMQDDPKAWKWVIRKRIWDLMEGKNFAQNPRPVHHRIPNFVGASLAADKMRALDVFRDAQCVKVNPDSPQKQVRFLTLSDGKKLLTPQPRLRTGFFSVIESNMLTLGTIKEACTSVGVAKYGRPIGLDEKIKVDLIVIGSVAVDPNTGARLGKGEGFAELEYGMLRYMGAIDDSTLVVTSVHDCQLVDDIPVEKLLIHDVPVDIICTPTQVIFTNTSIPKPQGIYWDKLSPEKLGQIRILRELKRRIELETGKKLPTGPSEKLPPTAQRNRRG*