Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289330 | MCH84716.1 | 50.935 | 214 | 53 | 7 | 1 | 169 | 185 | 391 | 4.24e-46 | 168 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289330 | A0A392MB99 | 50.935 | 214 | 53 | 7 | 1 | 169 | 185 | 391 | 2.03e-46 | 168 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa0289330 | 0.817772 | 2.772765e-52 | -8.615850e-47 |
| Msa0007440 | Msa0289330 | 0.836795 | 7.590922e-57 | -8.615850e-47 |
| Msa0014710 | Msa0289330 | 0.802597 | 5.201520e-49 | -8.615850e-47 |
| Msa0021210 | Msa0289330 | 0.844033 | 9.711186e-59 | -8.615850e-47 |
| Msa0027770 | Msa0289330 | 0.804584 | 2.013948e-49 | -8.615850e-47 |
| Msa0031520 | Msa0289330 | 0.809054 | 2.287569e-50 | -8.615850e-47 |
| Msa0037880 | Msa0289330 | 0.817499 | 3.194205e-52 | -8.615850e-47 |
| Msa0040620 | Msa0289330 | 0.802359 | 5.825381e-49 | -8.615850e-47 |
| Msa0042550 | Msa0289330 | 0.801745 | 7.788351e-49 | -8.615850e-47 |
| Msa0042920 | Msa0289330 | 0.808870 | 2.504101e-50 | -8.615850e-47 |
| Msa0056450 | Msa0289330 | 0.800938 | 1.139698e-48 | -8.615850e-47 |
| Msa0063530 | Msa0289330 | 0.804593 | 2.005317e-49 | -8.615850e-47 |
| Msa0078900 | Msa0289330 | 0.816775 | 4.647882e-52 | -8.615850e-47 |
| Msa0084380 | Msa0289330 | 0.804485 | 2.111714e-49 | -8.615850e-47 |
| Msa0086420 | Msa0289330 | 0.802658 | 5.054118e-49 | -8.615850e-47 |
| Msa0089820 | Msa0289330 | 0.835371 | 1.744998e-56 | -8.615850e-47 |
| Msa0109590 | Msa0289330 | 0.813395 | 2.615469e-51 | -8.615850e-47 |
| Msa0114060 | Msa0289330 | 0.804451 | 2.147025e-49 | -8.615850e-47 |
| Msa0114430 | Msa0289330 | 0.846469 | 2.130419e-59 | -8.615850e-47 |
| Msa0131330 | Msa0289330 | 0.805382 | 1.371588e-49 | -8.615850e-47 |
| Msa0138020 | Msa0289330 | 0.805234 | 1.472630e-49 | -8.615850e-47 |
| Msa0138500 | Msa0289330 | 0.801465 | 8.888110e-49 | -8.615850e-47 |
| Msa0138520 | Msa0289330 | 0.809429 | 1.901005e-50 | -8.615850e-47 |
| Msa0140500 | Msa0289330 | -0.823490 | 1.346680e-53 | -8.615850e-47 |
| Msa0150840 | Msa0289330 | 0.816772 | 4.653800e-52 | -8.615850e-47 |
| Msa0156700 | Msa0289330 | 0.812262 | 4.630742e-51 | -8.615850e-47 |
| Msa0171120 | Msa0289330 | 0.802751 | 4.835513e-49 | -8.615850e-47 |
| Msa0171540 | Msa0289330 | 0.822394 | 2.425836e-53 | -8.615850e-47 |
| Msa0178510 | Msa0289330 | 0.804229 | 2.388427e-49 | -8.615850e-47 |
| Msa0180500 | Msa0289330 | 0.833721 | 4.532733e-56 | -8.615850e-47 |
| Msa0187250 | Msa0289330 | 0.800707 | 1.270024e-48 | -8.615850e-47 |
| Msa0187950 | Msa0289330 | 0.804451 | 2.146350e-49 | -8.615850e-47 |
| Msa0188150 | Msa0289330 | 0.815022 | 1.143514e-51 | -8.615850e-47 |
| Msa0197660 | Msa0289330 | 0.816884 | 4.393786e-52 | -8.615850e-47 |
| Msa0206010 | Msa0289330 | 0.801921 | 7.168340e-49 | -8.615850e-47 |
| Msa0207040 | Msa0289330 | -0.805933 | 1.050873e-49 | -8.615850e-47 |
| Msa0212990 | Msa0289330 | 0.804634 | 1.965935e-49 | -8.615850e-47 |
| Msa0226180 | Msa0289330 | 0.802772 | 4.787555e-49 | -8.615850e-47 |
| Msa0229380 | Msa0289330 | 0.806285 | 8.859284e-50 | -8.615850e-47 |
| Msa0236510 | Msa0289330 | -0.809754 | 1.618362e-50 | -8.615850e-47 |
| Msa0239800 | Msa0289330 | 0.812782 | 3.565490e-51 | -8.615850e-47 |
| Msa0241140 | Msa0289330 | 0.813663 | 2.284111e-51 | -8.615850e-47 |
| Msa0241190 | Msa0289330 | 0.817812 | 2.715826e-52 | -8.615850e-47 |
| Msa0241470 | Msa0289330 | 0.803769 | 2.976263e-49 | -8.615850e-47 |
| Msa0255080 | Msa0289330 | 0.806769 | 7.002367e-50 | -8.615850e-47 |
| Msa0259210 | Msa0289330 | 0.828501 | 8.682262e-55 | -8.615850e-47 |
| Msa0277820 | Msa0289330 | 0.807607 | 4.654501e-50 | -8.615850e-47 |
| Msa0279220 | Msa0289330 | 0.815202 | 1.043172e-51 | -8.615850e-47 |
| Msa0279240 | Msa0289330 | 0.800333 | 1.513872e-48 | -8.615850e-47 |
| Msa0289250 | Msa0289330 | 0.861777 | 8.083850e-64 | -8.615850e-47 |
| Msa0289260 | Msa0289330 | 0.845032 | 5.228312e-59 | -8.615850e-47 |
| Msa0289330 | Msa0290760 | 0.810872 | 9.287377e-51 | -8.615850e-47 |
| Msa0289330 | Msa0306210 | -0.817787 | 2.750801e-52 | -8.615850e-47 |
| Msa0289330 | Msa0317510 | 0.812322 | 4.494322e-51 | -8.615850e-47 |
| Msa0289330 | Msa0319170 | 0.811543 | 6.643934e-51 | -8.615850e-47 |
| Msa0289330 | Msa0326110 | 0.802238 | 6.168804e-49 | -8.615850e-47 |
| Msa0289330 | Msa0326520 | 0.807143 | 5.836044e-50 | -8.615850e-47 |
| Msa0289330 | Msa0327110 | 0.833514 | 5.104837e-56 | -8.615850e-47 |
| Msa0289330 | Msa0327120 | 0.839186 | 1.841908e-57 | -8.615850e-47 |
| Msa0289330 | Msa0328070 | 0.809000 | 2.348940e-50 | -8.615850e-47 |
| Msa0289330 | Msa0330340 | 0.802095 | 6.600707e-49 | -8.615850e-47 |
| Msa0289330 | Msa0336310 | 0.801049 | 1.081411e-48 | -8.615850e-47 |
| Msa0289330 | Msa0336320 | 0.832783 | 7.764136e-56 | -8.615850e-47 |
| Msa0289330 | Msa0344690 | -0.805377 | 1.374571e-49 | -8.615850e-47 |
| Msa0289330 | Msa0347750 | 0.806928 | 6.482803e-50 | -8.615850e-47 |
| Msa0289330 | Msa0376910 | 0.816971 | 4.200276e-52 | -8.615850e-47 |
| Msa0289330 | Msa0381610 | -0.839247 | 1.775698e-57 | -8.615850e-47 |
| Msa0289330 | Msa0390400 | -0.812684 | 3.744774e-51 | -8.615850e-47 |
| Msa0289330 | Msa0392040 | -0.817614 | 3.010452e-52 | -8.615850e-47 |
| Msa0289330 | Msa0392270 | 0.805808 | 1.116060e-49 | -8.615850e-47 |
| Msa0289330 | Msa0393620 | 0.810342 | 1.209103e-50 | -8.615850e-47 |
| Msa0289330 | Msa0412840 | 0.819292 | 1.253588e-52 | -8.615850e-47 |
| Msa0289330 | Msa0417330 | 0.810954 | 8.912847e-51 | -8.615850e-47 |
| Msa0289330 | Msa0422180 | 0.801548 | 8.546812e-49 | -8.615850e-47 |
| Msa0289330 | Msa0433410 | -0.834611 | 2.711442e-56 | -8.615850e-47 |
| Msa0289330 | Msa0434180 | 0.805824 | 1.107816e-49 | -8.615850e-47 |
| Msa0289330 | Msa0442610 | 0.801060 | 1.075839e-48 | -8.615850e-47 |
| Msa0289330 | Msa0444750 | -0.802912 | 4.478694e-49 | -8.615850e-47 |
| Msa0289330 | Msa0457510 | 0.840345 | 9.195689e-58 | -8.615850e-47 |
| Msa0289330 | Msa0466250 | 0.800474 | 1.417247e-48 | -8.615850e-47 |
| Msa0289330 | Msa0468320 | 0.809352 | 1.974003e-50 | -8.615850e-47 |
| Msa0289330 | Msa0469940 | -0.810166 | 1.319283e-50 | -8.615850e-47 |
| Msa0289330 | Msa0471900 | 0.816857 | 4.454184e-52 | -8.615850e-47 |
| Msa0289330 | Msa0477130 | -0.812793 | 3.546165e-51 | -8.615850e-47 |
| Msa0289330 | Msa0481970 | 0.805097 | 1.573843e-49 | -8.615850e-47 |
| Msa0289330 | Msa0482180 | 0.811593 | 6.479331e-51 | -8.615850e-47 |
| Msa0289330 | Msa0485490 | 0.826950 | 2.047218e-54 | -8.615850e-47 |
| Msa0289330 | Msa0517090 | 0.806377 | 8.471763e-50 | -8.615850e-47 |
| Msa0289330 | Msa0518380 | 0.812941 | 3.290924e-51 | -8.615850e-47 |
| Msa0289330 | Msa0521740 | 0.823321 | 1.475483e-53 | -8.615850e-47 |
| Msa0289330 | Msa0529890 | 0.800042 | 1.735107e-48 | -8.615850e-47 |
| Msa0289330 | Msa0530400 | 0.821420 | 4.077108e-53 | -8.615850e-47 |
| Msa0289330 | Msa0532930 | 0.805755 | 1.145518e-49 | -8.615850e-47 |
| Msa0289330 | Msa0532990 | 0.813820 | 2.109039e-51 | -8.615850e-47 |
| Msa0289330 | Msa0545700 | 0.824837 | 6.499017e-54 | -8.615850e-47 |
| Msa0289330 | Msa0548920 | 0.823824 | 1.124785e-53 | -8.615850e-47 |
| Msa0289330 | Msa0549780 | 0.809943 | 1.473356e-50 | -8.615850e-47 |
| Msa0289330 | Msa0562440 | 0.804271 | 2.340497e-49 | -8.615850e-47 |
| Msa0289330 | Msa0592440 | 0.823814 | 1.131290e-53 | -8.615850e-47 |
| Msa0289330 | Msa0598160 | 0.807814 | 4.206437e-50 | -8.615850e-47 |
| Msa0289330 | Msa0602980 | 0.802488 | 5.477635e-49 | -8.615850e-47 |
| Msa0289330 | Msa0610130 | 0.815224 | 1.031457e-51 | -8.615850e-47 |
| Msa0289330 | Msa0610180 | 0.802391 | 5.737461e-49 | -8.615850e-47 |
| Msa0289330 | Msa0613440 | 0.806597 | 7.613664e-50 | -8.615850e-47 |
| Msa0289330 | Msa0617640 | 0.810155 | 1.326700e-50 | -8.615850e-47 |
| Msa0289330 | Msa0624960 | 0.810745 | 9.891425e-51 | -8.615850e-47 |
| Msa0289330 | Msa0661320 | 0.812532 | 4.042745e-51 | -8.615850e-47 |
| Msa0289330 | Msa0679290 | -0.813610 | 2.346380e-51 | -8.615850e-47 |
| Msa0289330 | Msa0689780 | 0.802150 | 6.430581e-49 | -8.615850e-47 |
| Msa0289330 | Msa0696390 | 0.803507 | 3.372378e-49 | -8.615850e-47 |
| Msa0289330 | Msa0703780 | 0.800925 | 1.146610e-48 | -8.615850e-47 |
| Msa0289330 | Msa0705190 | 0.833359 | 5.579873e-56 | -8.615850e-47 |
| Msa0289330 | Msa0711100 | 0.803611 | 3.209339e-49 | -8.615850e-47 |
| Msa0289330 | Msa0711790 | 0.805034 | 1.622202e-49 | -8.615850e-47 |
| Msa0289330 | Msa0719480 | 0.828592 | 8.251838e-55 | -8.615850e-47 |
| Msa0289330 | Msa0721280 | 0.814214 | 1.726246e-51 | -8.615850e-47 |
| Msa0289330 | Msa0731940 | 0.836798 | 7.574767e-57 | -8.615850e-47 |
| Msa0289330 | Msa0738440 | 0.808550 | 2.930889e-50 | -8.615850e-47 |
| Msa0289330 | Msa0749440 | 0.810705 | 1.009028e-50 | -8.615850e-47 |
| Msa0289330 | Msa0750650 | 0.803643 | 3.160310e-49 | -8.615850e-47 |
| Msa0289330 | Msa0751850 | 0.801294 | 9.638820e-49 | -8.615850e-47 |
| Msa0289330 | Msa0760350 | 0.821736 | 3.445678e-53 | -8.615850e-47 |
| Msa0289330 | Msa0762970 | 0.813345 | 2.683566e-51 | -8.615850e-47 |
| Msa0289330 | Msa0763890 | 0.811249 | 7.695586e-51 | -8.615850e-47 |
| Msa0289330 | Msa0763920 | 0.810856 | 9.363516e-51 | -8.615850e-47 |
| Msa0289330 | Msa0784380 | 0.801722 | 7.875763e-49 | -8.615850e-47 |
| Msa0289330 | Msa0801730 | 0.825904 | 3.634766e-54 | -8.615850e-47 |
| Msa0289330 | Msa0810220 | 0.817653 | 2.949844e-52 | -8.615850e-47 |
| Msa0289330 | Msa0817460 | 0.835622 | 1.507633e-56 | -8.615850e-47 |
| Msa0289330 | Msa0817650 | 0.807395 | 5.162016e-50 | -8.615850e-47 |
| Msa0289330 | Msa0820850 | 0.820379 | 7.074620e-53 | -8.615850e-47 |
| Msa0289330 | Msa0821190 | 0.804690 | 1.914283e-49 | -8.615850e-47 |
| Msa0289330 | Msa0831850 | 0.821410 | 4.098760e-53 | -8.615850e-47 |
| Msa0289330 | Msa0832150 | 0.809526 | 1.811303e-50 | -8.615850e-47 |
| Msa0289330 | Msa0842790 | 0.808959 | 2.396710e-50 | -8.615850e-47 |
| Msa0289330 | Msa0844110 | 0.814300 | 1.652371e-51 | -8.615850e-47 |
| Msa0289330 | Msa0844420 | 0.812992 | 3.205993e-51 | -8.615850e-47 |
| Msa0289330 | Msa0844450 | 0.815557 | 8.698092e-52 | -8.615850e-47 |
| Msa0289330 | Msa0844490 | 0.818552 | 1.847022e-52 | -8.615850e-47 |
| Msa0289330 | Msa0849030 | 0.822030 | 2.946321e-53 | -8.615850e-47 |
| Msa0289330 | Msa0858130 | 0.803016 | 4.263370e-49 | -8.615850e-47 |
| Msa0289330 | Msa0861130 | 0.822948 | 1.801988e-53 | -8.615850e-47 |
| Msa0289330 | Msa0866410 | 0.808783 | 2.613894e-50 | -8.615850e-47 |
| Msa0289330 | Msa0868160 | 0.811539 | 6.655941e-51 | -8.615850e-47 |
| Msa0289330 | Msa0879600 | 0.809352 | 1.974642e-50 | -8.615850e-47 |
| Msa0289330 | Msa0890550 | 0.832304 | 1.020296e-55 | -8.615850e-47 |
| Msa0289330 | Msa0897330 | 0.813170 | 2.931569e-51 | -8.615850e-47 |
| Msa0289330 | Msa0909110 | 0.803714 | 3.056216e-49 | -8.615850e-47 |
| Msa0289330 | Msa0927380 | 0.835089 | 2.055284e-56 | -8.615850e-47 |
| Msa0289330 | Msa0933100 | 0.804532 | 2.064831e-49 | -8.615850e-47 |
| Msa0289330 | Msa0936300 | 0.812059 | 5.130215e-51 | -8.615850e-47 |
| Msa0289330 | Msa0942550 | -0.836346 | 9.873245e-57 | -8.615850e-47 |
| Msa0289330 | Msa0942560 | -0.821503 | 3.900926e-53 | -8.615850e-47 |
| Msa0289330 | Msa0948320 | 0.800470 | 1.419896e-48 | -8.615850e-47 |
| Msa0289330 | Msa0960740 | 0.804532 | 2.064881e-49 | -8.615850e-47 |
| Msa0289330 | Msa0962840 | 0.809605 | 1.741795e-50 | -8.615850e-47 |
| Msa0289330 | Msa0969810 | 0.809886 | 1.515960e-50 | -8.615850e-47 |
| Msa0289330 | Msa0973100 | 0.813406 | 2.601271e-51 | -8.615850e-47 |
| Msa0289330 | Msa0974080 | 0.801978 | 6.975324e-49 | -8.615850e-47 |
| Msa0289330 | Msa0992600 | 0.800235 | 1.585428e-48 | -8.615850e-47 |
| Msa0289330 | Msa0994370 | 0.804242 | 2.373127e-49 | -8.615850e-47 |
| Msa0289330 | Msa1001390 | 0.813876 | 2.049663e-51 | -8.615850e-47 |
| Msa0289330 | Msa1026940 | 0.812864 | 3.420709e-51 | -8.615850e-47 |
| Msa0289330 | Msa1028590 | 0.804602 | 1.996784e-49 | -8.615850e-47 |
| Msa0289330 | Msa1029080 | -0.808726 | 2.687478e-50 | -8.615850e-47 |
| Msa0289330 | Msa1034280 | 0.802182 | 6.334264e-49 | -8.615850e-47 |
| Msa0289330 | Msa1036610 | 0.802169 | 6.372258e-49 | -8.615850e-47 |
| Msa0289330 | Msa1052330 | 0.805318 | 1.414756e-49 | -8.615850e-47 |
| Msa0289330 | Msa1063420 | 0.806900 | 6.572294e-50 | -8.615850e-47 |
| Msa0289330 | Msa1064250 | 0.834972 | 2.199514e-56 | -8.615850e-47 |
| Msa0289330 | Msa1075540 | 0.810106 | 1.359285e-50 | -8.615850e-47 |
| Msa0289330 | Msa1108070 | 0.803000 | 4.295862e-49 | -8.615850e-47 |
| Msa0289330 | Msa1111870 | 0.829726 | 4.379961e-55 | -8.615850e-47 |
| Msa0289330 | Msa1113170 | 0.815194 | 1.047651e-51 | -8.615850e-47 |
| Msa0289330 | Msa1124540 | -0.800790 | 1.221890e-48 | -8.615850e-47 |
| Msa0289330 | Msa1137570 | 0.811006 | 8.688128e-51 | -8.615850e-47 |
| Msa0289330 | Msa1142670 | 0.802767 | 4.798932e-49 | -8.615850e-47 |
| Msa0289330 | Msa1143020 | 0.801223 | 9.965714e-49 | -8.615850e-47 |
| Msa0289330 | Msa1144720 | -0.806860 | 6.699368e-50 | -8.615850e-47 |
| Msa0289330 | Msa1154280 | 0.811859 | 5.668909e-51 | -8.615850e-47 |
| Msa0289330 | Msa1156170 | -0.804110 | 2.528126e-49 | -8.615850e-47 |
| Msa0289330 | Msa1168580 | 0.812298 | 4.548494e-51 | -8.615850e-47 |
| Msa0289330 | Msa1177780 | 0.801316 | 9.535173e-49 | -8.615850e-47 |
| Msa0289330 | Msa1181250 | 0.818393 | 2.006283e-52 | -8.615850e-47 |
| Msa0289330 | Msa1181330 | 0.812926 | 3.316185e-51 | -8.615850e-47 |
| Msa0289330 | Msa1186950 | -0.804387 | 2.213527e-49 | -8.615850e-47 |
| Msa0289330 | Msa1193290 | 0.802698 | 4.959056e-49 | -8.615850e-47 |
| Msa0289330 | Msa1204630 | 0.804554 | 2.042905e-49 | -8.615850e-47 |
| Msa0289330 | Msa1207310 | 0.803247 | 3.818557e-49 | -8.615850e-47 |
| Msa0289330 | Msa1207470 | -0.821579 | 3.745037e-53 | -8.615850e-47 |
| Msa0289330 | Msa1210020 | 0.809205 | 2.123262e-50 | -8.615850e-47 |
| Msa0289330 | Msa1215920 | 0.801260 | 9.791845e-49 | -8.615850e-47 |
| Msa0289330 | Msa1232740 | 0.806407 | 8.350177e-50 | -8.615850e-47 |
| Msa0289330 | Msa1236890 | 0.812489 | 4.132543e-51 | -8.615850e-47 |
| Msa0289330 | Msa1237980 | 0.809324 | 2.001955e-50 | -8.615850e-47 |
| Msa0289330 | Msa1259590 | -0.803198 | 3.907835e-49 | -8.615850e-47 |
| Msa0289330 | Msa1263290 | -0.801906 | 7.219628e-49 | -8.615850e-47 |
| Msa0289330 | Msa1270660 | 0.832258 | 1.047741e-55 | -8.615850e-47 |
| Msa0289330 | Msa1277660 | 0.808662 | 2.774437e-50 | -8.615850e-47 |
| Msa0289330 | Msa1282580 | -0.805457 | 1.322957e-49 | -8.615850e-47 |
| Msa0289330 | Msa1287460 | 0.811977 | 5.344421e-51 | -8.615850e-47 |
| Msa0289330 | Msa1296460 | -0.812932 | 3.305101e-51 | -8.615850e-47 |
| Msa0289330 | Msa1298510 | 0.814498 | 1.494255e-51 | -8.615850e-47 |
| Msa0289330 | Msa1305810 | 0.803164 | 3.973041e-49 | -8.615850e-47 |
| Msa0289330 | Msa1306760 | 0.803519 | 3.353638e-49 | -8.615850e-47 |
| Msa0289330 | Msa1306850 | 0.801007 | 1.103058e-48 | -8.615850e-47 |
| Msa0289330 | Msa1306920 | 0.811643 | 6.318960e-51 | -8.615850e-47 |
| Msa0289330 | Msa1313320 | 0.820112 | 8.146987e-53 | -8.615850e-47 |
| Msa0289330 | Msa1332040 | -0.801250 | 9.840346e-49 | -8.615850e-47 |
| Msa0289330 | Msa1332050 | 0.801580 | 8.419835e-49 | -8.615850e-47 |
| Msa0289330 | Msa1357890 | 0.816279 | 6.000907e-52 | -8.615850e-47 |
| Msa0289330 | Msa1364830 | 0.803340 | 3.652845e-49 | -8.615850e-47 |
| Msa0289330 | Msa1371940 | 0.808454 | 3.072981e-50 | -8.615850e-47 |
| Msa0289330 | Msa1372150 | 0.800806 | 1.212667e-48 | -8.615850e-47 |
| Msa0289330 | Msa1374710 | 0.817608 | 3.018656e-52 | -8.615850e-47 |
| Msa0289330 | Msa1378940 | 0.806401 | 8.375776e-50 | -8.615850e-47 |
| Msa0289330 | Msa1382790 | 0.818009 | 2.451519e-52 | -8.615850e-47 |
| Msa0289330 | Msa1390700 | 0.832605 | 8.593671e-56 | -8.615850e-47 |
| Msa0289330 | Msa1392910 | 0.823892 | 1.084678e-53 | -8.615850e-47 |
| Msa0289330 | Msa1394310 | 0.812837 | 3.467432e-51 | -8.615850e-47 |
| Msa0289330 | Msa1397120 | 0.814655 | 1.379587e-51 | -8.615850e-47 |
| Msa0289330 | Msa1398090 | 0.805652 | 1.203770e-49 | -8.615850e-47 |
| Msa0289330 | Msa1403340 | 0.834498 | 2.895256e-56 | -8.615850e-47 |
| Msa0289330 | Msa1403890 | 0.803747 | 3.008135e-49 | -8.615850e-47 |
| Msa0289330 | Msa1410100 | 0.848235 | 6.976255e-60 | -8.615850e-47 |
| Msa0289330 | Msa1410110 | 0.839870 | 1.223234e-57 | -8.615850e-47 |
| Msa0289330 | Msa1412530 | 0.816159 | 6.384883e-52 | -8.615850e-47 |
| Msa0289330 | Msa1416370 | 0.827447 | 1.556795e-54 | -8.615850e-47 |
| Msa0289330 | Msa1420270 | 0.804607 | 1.991679e-49 | -8.615850e-47 |
| Msa0289330 | Msa1427230 | 0.805124 | 1.552971e-49 | -8.615850e-47 |
| Msa0289330 | Msa1430410 | 0.801769 | 7.701723e-49 | -8.615850e-47 |
| Msa0289330 | Msa1443060 | 0.801740 | 7.805870e-49 | -8.615850e-47 |
| Msa0289330 | Msa1444260 | 0.809047 | 2.295063e-50 | -8.615850e-47 |
| Msa0289330 | Msa1444440 | 0.804447 | 2.150410e-49 | -8.615850e-47 |
| Msa0289330 | Msa1445390 | -0.821775 | 3.375251e-53 | -8.615850e-47 |
| Msa0289330 | Msa1449340 | -0.828410 | 9.130109e-55 | -8.615850e-47 |
| Msa0289330 | Msa1451620 | -0.822402 | 2.415108e-53 | -8.615850e-47 |
| Msa0289330 | Msa1466540 | 0.822633 | 2.134232e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0289330 | MtrunA17_Chr1g0160961 | 49.065 | 214 | 57 | 7 | 1 | 169 | 1108 | 1314 | 1.01e-45 | 159 |
| Msa0289330 | MtrunA17_Chr5g0419891 | 48.598 | 214 | 58 | 7 | 1 | 169 | 984 | 1190 | 4.89e-45 | 157 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 33 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATTCTATCATCTCATTTC+AGG | 0.217727 | 2_3:+35543514 | Msa0289330:CDS |
| GTTGTCAATTCCTTGAAAAC+TGG | 0.305092 | 2_3:-35543851 | None:intergenic |
| TTGGACAGGACCTGGGGATA+TGG | 0.313019 | 2_3:+35543342 | Msa0289330:CDS |
| GGCAACTTCAAGCAAATTAG+TGG | 0.357784 | 2_3:-35543788 | None:intergenic |
| CATCTCATTTCAGGAGTAGA+TGG | 0.362782 | 2_3:+35543523 | Msa0289330:CDS |
| AAGACAACATGCACTTTACT+AGG | 0.368570 | 2_3:+35543493 | Msa0289330:CDS |
| AGGCCACTCTGATGCGCATT+TGG | 0.371819 | 2_3:+35543601 | Msa0289330:CDS |
| AACAAAGAAAAGTCCACATT+TGG | 0.394798 | 2_3:-35543809 | None:intergenic |
| TTCATATTGCTGCCACCTAC+AGG | 0.401617 | 2_3:-35543469 | None:intergenic |
| ACACTGCCTTGGACAGGACC+TGG | 0.477027 | 2_3:+35543334 | Msa0289330:CDS |
| GTCAATGATGCATGCTGAAT+AGG | 0.489388 | 2_3:-35543883 | None:intergenic |
| CACTGCCTTGGACAGGACCT+GGG | 0.509070 | 2_3:+35543335 | Msa0289330:CDS |
| GCATTTGGATACGATATATG+AGG | 0.530559 | 2_3:+35543616 | Msa0289330:CDS |
| GCAGCGGATTAACACTGCCT+TGG | 0.543231 | 2_3:+35543323 | Msa0289330:CDS |
| GAGTAGATGGTTGTCTGTAA+AGG | 0.545061 | 2_3:+35543536 | Msa0289330:CDS |
| CAAGCTGGTCCTCTAAAAGT+TGG | 0.547141 | 2_3:+35543751 | Msa0289330:CDS |
| GGATTAACACTGCCTTGGAC+AGG | 0.550002 | 2_3:+35543328 | Msa0289330:CDS |
| TTGCTTGAAGTTGCCAAATG+TGG | 0.554295 | 2_3:+35543796 | Msa0289330:CDS |
| GCAACTTCAAGCAAATTAGT+GGG | 0.566368 | 2_3:-35543787 | None:intergenic |
| GTTGCTATAGAGCAAACATT+GGG | 0.568539 | 2_3:+35543364 | Msa0289330:CDS |
| GGTTGCTATAGAGCAAACAT+TGG | 0.591297 | 2_3:+35543363 | Msa0289330:CDS |
| GGCAGTGTTAATCCGCTGCA+TGG | 0.594322 | 2_3:-35543319 | None:intergenic |
| ATATCCCCAGGTCCTGTCCA+AGG | 0.597750 | 2_3:-35543340 | None:intergenic |
| GTAAAATCTAAAGCCGTGGA+TGG | 0.599176 | 2_3:+35543558 | Msa0289330:CDS |
| GATGCATGCTGAATAGGAGA+AGG | 0.600149 | 2_3:-35543877 | None:intergenic |
| TTTCACTATACCAAGCAAGC+TGG | 0.602071 | 2_3:+35543736 | Msa0289330:CDS |
| TCTATAGCAACCATATCCCC+AGG | 0.613424 | 2_3:-35543352 | None:intergenic |
| AAAGGTAAAATCTAAAGCCG+TGG | 0.614741 | 2_3:+35543554 | Msa0289330:CDS |
| AAAAGAACTAATGCCATCCA+CGG | 0.628505 | 2_3:-35543571 | None:intergenic |
| ACTGCCTTGGACAGGACCTG+GGG | 0.640697 | 2_3:+35543336 | Msa0289330:CDS |
| TACTTCAAAATAGAGAGACA+TGG | 0.684859 | 2_3:-35543396 | None:intergenic |
| AAACAACCTTCACCATGCAG+CGG | 0.695848 | 2_3:+35543307 | None:intergenic |
| TATCCAAATGCGCATCAGAG+TGG | 0.708943 | 2_3:-35543604 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTGTATACAAAGTTCA+AGG | - | chr2_3:35543422-35543441 | None:intergenic | 20.0% |
| !!! | CATTAGTTCTTTTAGCATTA+AGG | + | chr2_3:35543581-35543600 | Msa0289330:CDS | 25.0% |
| ! | AGAAGTCTTCAATAATAGAA+TGG | + | chr2_3:35543659-35543678 | Msa0289330:intron | 25.0% |
| ! | GAAGTCTTCAATAATAGAAT+GGG | + | chr2_3:35543660-35543679 | Msa0289330:intron | 25.0% |
| TACTTCAAAATAGAGAGACA+TGG | - | chr2_3:35543399-35543418 | None:intergenic | 30.0% | |
| AAAAATTTCTCCGTAACAAG+AGG | + | chr2_3:35543436-35543455 | Msa0289330:CDS | 30.0% | |
| !!! | CTTTTTTACTCCTCTTGTTA+CGG | - | chr2_3:35543449-35543468 | None:intergenic | 30.0% |
| AACAAAGAAAAGTCCACATT+TGG | - | chr2_3:35543812-35543831 | None:intergenic | 30.0% | |
| !!! | TGTGGACTTTTCTTTGTTTT+TGG | + | chr2_3:35543814-35543833 | Msa0289330:CDS | 30.0% |
| GTTGCTATAGAGCAAACATT+GGG | + | chr2_3:35543364-35543383 | Msa0289330:CDS | 35.0% | |
| AAGACAACATGCACTTTACT+AGG | + | chr2_3:35543493-35543512 | Msa0289330:CDS | 35.0% | |
| GGATTCTATCATCTCATTTC+AGG | + | chr2_3:35543514-35543533 | Msa0289330:CDS | 35.0% | |
| ! | AAAGGTAAAATCTAAAGCCG+TGG | + | chr2_3:35543554-35543573 | Msa0289330:CDS | 35.0% |
| AAAAGAACTAATGCCATCCA+CGG | - | chr2_3:35543574-35543593 | None:intergenic | 35.0% | |
| GCATTTGGATACGATATATG+AGG | + | chr2_3:35543616-35543635 | Msa0289330:CDS | 35.0% | |
| AAACTGAACCAAGGAAAAAG+TGG | - | chr2_3:35543711-35543730 | None:intergenic | 35.0% | |
| GAAATGTTGAAACTGAACCA+AGG | - | chr2_3:35543720-35543739 | None:intergenic | 35.0% | |
| ! | TCTACACTACCAACTTTTAG+AGG | - | chr2_3:35543763-35543782 | None:intergenic | 35.0% |
| GCAACTTCAAGCAAATTAGT+GGG | - | chr2_3:35543790-35543809 | None:intergenic | 35.0% | |
| ! | GAAAGAATGTCCAGTTTTCA+AGG | + | chr2_3:35543841-35543860 | Msa0289330:CDS | 35.0% |
| GTTGTCAATTCCTTGAAAAC+TGG | - | chr2_3:35543854-35543873 | None:intergenic | 35.0% | |
| GGTTGCTATAGAGCAAACAT+TGG | + | chr2_3:35543363-35543382 | Msa0289330:CDS | 40.0% | |
| AGAGGAGTAAAAAAGCCTGT+AGG | + | chr2_3:35543454-35543473 | Msa0289330:CDS | 40.0% | |
| CATCTCATTTCAGGAGTAGA+TGG | + | chr2_3:35543523-35543542 | Msa0289330:CDS | 40.0% | |
| GAGTAGATGGTTGTCTGTAA+AGG | + | chr2_3:35543536-35543555 | Msa0289330:CDS | 40.0% | |
| ! | GTAAAATCTAAAGCCGTGGA+TGG | + | chr2_3:35543558-35543577 | Msa0289330:CDS | 40.0% |
| TTTCACTATACCAAGCAAGC+TGG | + | chr2_3:35543736-35543755 | Msa0289330:CDS | 40.0% | |
| GGCAACTTCAAGCAAATTAG+TGG | - | chr2_3:35543791-35543810 | None:intergenic | 40.0% | |
| TTGCTTGAAGTTGCCAAATG+TGG | + | chr2_3:35543796-35543815 | Msa0289330:CDS | 40.0% | |
| GTCAATGATGCATGCTGAAT+AGG | - | chr2_3:35543886-35543905 | None:intergenic | 40.0% | |
| TCTATAGCAACCATATCCCC+AGG | - | chr2_3:35543355-35543374 | None:intergenic | 45.0% | |
| GGAGTAAAAAAGCCTGTAGG+TGG | + | chr2_3:35543457-35543476 | Msa0289330:CDS | 45.0% | |
| TTCATATTGCTGCCACCTAC+AGG | - | chr2_3:35543472-35543491 | None:intergenic | 45.0% | |
| TATCCAAATGCGCATCAGAG+TGG | - | chr2_3:35543607-35543626 | None:intergenic | 45.0% | |
| !! | AGGAAAAAGTGGACTGGAAG+TGG | - | chr2_3:35543700-35543719 | None:intergenic | 45.0% |
| !!! | CTTCCAGTCCACTTTTTCCT+TGG | + | chr2_3:35543700-35543719 | Msa0289330:intron | 45.0% |
| GAACCAAGGAAAAAGTGGAC+TGG | - | chr2_3:35543706-35543725 | None:intergenic | 45.0% | |
| !! | TTTTAGAGGACCAGCTTGCT+TGG | - | chr2_3:35543749-35543768 | None:intergenic | 45.0% |
| ! | CAAGCTGGTCCTCTAAAAGT+TGG | + | chr2_3:35543751-35543770 | Msa0289330:CDS | 45.0% |
| GATGCATGCTGAATAGGAGA+AGG | - | chr2_3:35543880-35543899 | None:intergenic | 45.0% | |
| GGATTAACACTGCCTTGGAC+AGG | + | chr2_3:35543328-35543347 | Msa0289330:CDS | 50.0% | |
| !! | GCAGCGGATTAACACTGCCT+TGG | + | chr2_3:35543323-35543342 | Msa0289330:CDS | 55.0% |
| ATATCCCCAGGTCCTGTCCA+AGG | - | chr2_3:35543343-35543362 | None:intergenic | 55.0% | |
| TTGGACAGGACCTGGGGATA+TGG | + | chr2_3:35543342-35543361 | Msa0289330:CDS | 55.0% | |
| AGGCCACTCTGATGCGCATT+TGG | + | chr2_3:35543601-35543620 | Msa0289330:CDS | 55.0% | |
| ACACTGCCTTGGACAGGACC+TGG | + | chr2_3:35543334-35543353 | Msa0289330:CDS | 60.0% | |
| CACTGCCTTGGACAGGACCT+GGG | + | chr2_3:35543335-35543354 | Msa0289330:CDS | 60.0% | |
| ACTGCCTTGGACAGGACCTG+GGG | + | chr2_3:35543336-35543355 | Msa0289330:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 35543321 | 35543909 | 35543321 | ID=Msa0289330;Name=Msa0289330 |
| chr2_3 | mRNA | 35543321 | 35543909 | 35543321 | ID=Msa0289330-mRNA-1;Parent=Msa0289330;Name=Msa0289330-mRNA-1;_AED=0.45;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|169 |
| chr2_3 | exon | 35543321 | 35543648 | 35543321 | ID=Msa0289330-mRNA-1:exon:11514;Parent=Msa0289330-mRNA-1 |
| chr2_3 | exon | 35543728 | 35543909 | 35543728 | ID=Msa0289330-mRNA-1:exon:11515;Parent=Msa0289330-mRNA-1 |
| chr2_3 | CDS | 35543321 | 35543648 | 35543321 | ID=Msa0289330-mRNA-1:cds;Parent=Msa0289330-mRNA-1 |
| chr2_3 | CDS | 35543728 | 35543909 | 35543728 | ID=Msa0289330-mRNA-1:cds;Parent=Msa0289330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
