Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558880 | RDX99972.1 | 76.471 | 68 | 16 | 0 | 5 | 72 | 876 | 943 | 6.64e-24 | 104 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0558880 | A0A371HB07 | 76.471 | 68 | 16 | 0 | 5 | 72 | 876 | 943 | 3.17e-24 | 104 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0558880 | -0.809748 | 1.623198e-50 | -8.615850e-47 |
| Msa0006700 | Msa0558880 | 0.802968 | 4.361367e-49 | -8.615850e-47 |
| Msa0008850 | Msa0558880 | 0.850186 | 1.997968e-60 | -8.615850e-47 |
| Msa0011720 | Msa0558880 | 0.820728 | 5.883252e-53 | -8.615850e-47 |
| Msa0020630 | Msa0558880 | 0.816847 | 4.477789e-52 | -8.615850e-47 |
| Msa0027540 | Msa0558880 | 0.819445 | 1.157217e-52 | -8.615850e-47 |
| Msa0041970 | Msa0558880 | 0.808205 | 3.472587e-50 | -8.615850e-47 |
| Msa0044710 | Msa0558880 | 0.826737 | 2.301626e-54 | -8.615850e-47 |
| Msa0047470 | Msa0558880 | 0.804767 | 1.844643e-49 | -8.615850e-47 |
| Msa0050430 | Msa0558880 | 0.809684 | 1.675146e-50 | -8.615850e-47 |
| Msa0050730 | Msa0558880 | 0.801112 | 1.049829e-48 | -8.615850e-47 |
| Msa0055280 | Msa0558880 | 0.827844 | 1.250136e-54 | -8.615850e-47 |
| Msa0060600 | Msa0558880 | 0.815248 | 1.018886e-51 | -8.615850e-47 |
| Msa0067150 | Msa0558880 | 0.820551 | 6.463036e-53 | -8.615850e-47 |
| Msa0075310 | Msa0558880 | 0.825329 | 4.973748e-54 | -8.615850e-47 |
| Msa0084680 | Msa0558880 | 0.811782 | 5.893099e-51 | -8.615850e-47 |
| Msa0101060 | Msa0558880 | 0.809282 | 2.043643e-50 | -8.615850e-47 |
| Msa0105340 | Msa0558880 | 0.826670 | 2.387869e-54 | -8.615850e-47 |
| Msa0105420 | Msa0558880 | 0.807914 | 4.004421e-50 | -8.615850e-47 |
| Msa0114250 | Msa0558880 | 0.813046 | 3.120537e-51 | -8.615850e-47 |
| Msa0120330 | Msa0558880 | 0.800666 | 1.294998e-48 | -8.615850e-47 |
| Msa0145950 | Msa0558880 | 0.812523 | 4.062764e-51 | -8.615850e-47 |
| Msa0149500 | Msa0558880 | 0.808988 | 2.362694e-50 | -8.615850e-47 |
| Msa0151690 | Msa0558880 | 0.825302 | 5.048970e-54 | -8.615850e-47 |
| Msa0154770 | Msa0558880 | 0.801603 | 8.329462e-49 | -8.615850e-47 |
| Msa0159750 | Msa0558880 | 0.815184 | 1.052810e-51 | -8.615850e-47 |
| Msa0164360 | Msa0558880 | 0.816615 | 5.046945e-52 | -8.615850e-47 |
| Msa0168100 | Msa0558880 | 0.822764 | 1.989390e-53 | -8.615850e-47 |
| Msa0182930 | Msa0558880 | 0.820263 | 7.521370e-53 | -8.615850e-47 |
| Msa0183610 | Msa0558880 | 0.810671 | 1.026667e-50 | -8.615850e-47 |
| Msa0183620 | Msa0558880 | 0.803971 | 2.702165e-49 | -8.615850e-47 |
| Msa0185390 | Msa0558880 | 0.803338 | 3.656438e-49 | -8.615850e-47 |
| Msa0188630 | Msa0558880 | 0.827353 | 1.639936e-54 | -8.615850e-47 |
| Msa0188680 | Msa0558880 | -0.832008 | 1.207667e-55 | -8.615850e-47 |
| Msa0193760 | Msa0558880 | 0.805497 | 1.297157e-49 | -8.615850e-47 |
| Msa0203160 | Msa0558880 | 0.814706 | 1.343876e-51 | -8.615850e-47 |
| Msa0203190 | Msa0558880 | 0.807126 | 5.884533e-50 | -8.615850e-47 |
| Msa0207000 | Msa0558880 | 0.826792 | 2.232811e-54 | -8.615850e-47 |
| Msa0208520 | Msa0558880 | 0.815812 | 7.631410e-52 | -8.615850e-47 |
| Msa0208630 | Msa0558880 | 0.816066 | 6.697986e-52 | -8.615850e-47 |
| Msa0223100 | Msa0558880 | 0.820636 | 6.176994e-53 | -8.615850e-47 |
| Msa0223290 | Msa0558880 | 0.825730 | 3.997645e-54 | -8.615850e-47 |
| Msa0223380 | Msa0558880 | 0.822238 | 2.636322e-53 | -8.615850e-47 |
| Msa0235890 | Msa0558880 | 0.816902 | 4.351776e-52 | -8.615850e-47 |
| Msa0369570 | Msa0558880 | 0.801826 | 7.497104e-49 | -8.615850e-47 |
| Msa0371070 | Msa0558880 | 0.806273 | 8.912328e-50 | -8.615850e-47 |
| Msa0371540 | Msa0558880 | 0.804058 | 2.591775e-49 | -8.615850e-47 |
| Msa0376510 | Msa0558880 | 0.809021 | 2.324077e-50 | -8.615850e-47 |
| Msa0393710 | Msa0558880 | 0.824431 | 8.102540e-54 | -8.615850e-47 |
| Msa0418430 | Msa0558880 | 0.807544 | 4.799797e-50 | -8.615850e-47 |
| Msa0419620 | Msa0558880 | -0.845531 | 3.833292e-59 | -8.615850e-47 |
| Msa0419970 | Msa0558880 | 0.801706 | 7.933783e-49 | -8.615850e-47 |
| Msa0423360 | Msa0558880 | -0.810143 | 1.334395e-50 | -8.615850e-47 |
| Msa0425050 | Msa0558880 | 0.803751 | 3.001479e-49 | -8.615850e-47 |
| Msa0426330 | Msa0558880 | 0.831571 | 1.548320e-55 | -8.615850e-47 |
| Msa0431520 | Msa0558880 | 0.833873 | 4.152242e-56 | -8.615850e-47 |
| Msa0431830 | Msa0558880 | 0.848110 | 7.550822e-60 | -8.615850e-47 |
| Msa0442850 | Msa0558880 | 0.809361 | 1.965324e-50 | -8.615850e-47 |
| Msa0448080 | Msa0558880 | 0.804940 | 1.697414e-49 | -8.615850e-47 |
| Msa0462590 | Msa0558880 | 0.805472 | 1.313071e-49 | -8.615850e-47 |
| Msa0464900 | Msa0558880 | 0.812944 | 3.285327e-51 | -8.615850e-47 |
| Msa0466060 | Msa0558880 | 0.800416 | 1.456383e-48 | -8.615850e-47 |
| Msa0467800 | Msa0558880 | 0.801912 | 7.196157e-49 | -8.615850e-47 |
| Msa0470610 | Msa0558880 | 0.804556 | 2.041563e-49 | -8.615850e-47 |
| Msa0472740 | Msa0558880 | 0.805988 | 1.023280e-49 | -8.615850e-47 |
| Msa0480320 | Msa0558880 | 0.805624 | 1.220317e-49 | -8.615850e-47 |
| Msa0240780 | Msa0558880 | 0.817222 | 3.688246e-52 | -8.615850e-47 |
| Msa0244270 | Msa0558880 | 0.801793 | 7.612954e-49 | -8.615850e-47 |
| Msa0252180 | Msa0558880 | 0.854193 | 1.449085e-61 | -8.615850e-47 |
| Msa0265210 | Msa0558880 | 0.802573 | 5.262321e-49 | -8.615850e-47 |
| Msa0270220 | Msa0558880 | -0.824679 | 7.083870e-54 | -8.615850e-47 |
| Msa0270270 | Msa0558880 | 0.808429 | 3.111256e-50 | -8.615850e-47 |
| Msa0280490 | Msa0558880 | 0.814438 | 1.540520e-51 | -8.615850e-47 |
| Msa0282170 | Msa0558880 | 0.819795 | 9.625192e-53 | -8.615850e-47 |
| Msa0284780 | Msa0558880 | 0.811142 | 8.116121e-51 | -8.615850e-47 |
| Msa0284870 | Msa0558880 | 0.817517 | 3.164610e-52 | -8.615850e-47 |
| Msa0288240 | Msa0558880 | 0.841554 | 4.427741e-58 | -8.615850e-47 |
| Msa0288330 | Msa0558880 | 0.805470 | 1.314732e-49 | -8.615850e-47 |
| Msa0292180 | Msa0558880 | 0.813087 | 3.056192e-51 | -8.615850e-47 |
| Msa0296760 | Msa0558880 | 0.830236 | 3.290363e-55 | -8.615850e-47 |
| Msa0301180 | Msa0558880 | 0.828951 | 6.758343e-55 | -8.615850e-47 |
| Msa0302650 | Msa0558880 | 0.821725 | 3.466652e-53 | -8.615850e-47 |
| Msa0307830 | Msa0558880 | -0.826152 | 3.172416e-54 | -8.615850e-47 |
| Msa0320540 | Msa0558880 | 0.802207 | 6.258262e-49 | -8.615850e-47 |
| Msa0326670 | Msa0558880 | 0.829303 | 5.551973e-55 | -8.615850e-47 |
| Msa0340550 | Msa0558880 | 0.807879 | 4.074331e-50 | -8.615850e-47 |
| Msa0357380 | Msa0558880 | 0.801255 | 9.817585e-49 | -8.615850e-47 |
| Msa0357390 | Msa0558880 | 0.812391 | 4.340669e-51 | -8.615850e-47 |
| Msa0489030 | Msa0558880 | 0.808362 | 3.214545e-50 | -8.615850e-47 |
| Msa0508200 | Msa0558880 | 0.800587 | 1.343574e-48 | -8.615850e-47 |
| Msa0508610 | Msa0558880 | 0.809412 | 1.916976e-50 | -8.615850e-47 |
| Msa0508650 | Msa0558880 | 0.802949 | 4.401748e-49 | -8.615850e-47 |
| Msa0511720 | Msa0558880 | -0.844357 | 7.950866e-59 | -8.615850e-47 |
| Msa0517340 | Msa0558880 | 0.800392 | 1.472668e-48 | -8.615850e-47 |
| Msa0520220 | Msa0558880 | 0.832306 | 1.019321e-55 | -8.615850e-47 |
| Msa0524090 | Msa0558880 | 0.805754 | 1.146131e-49 | -8.615850e-47 |
| Msa0524120 | Msa0558880 | 0.824362 | 8.410577e-54 | -8.615850e-47 |
| Msa0535030 | Msa0558880 | 0.822060 | 2.898371e-53 | -8.615850e-47 |
| Msa0535060 | Msa0558880 | 0.824510 | 7.763697e-54 | -8.615850e-47 |
| Msa0535450 | Msa0558880 | 0.823396 | 1.416664e-53 | -8.615850e-47 |
| Msa0546380 | Msa0558880 | 0.815937 | 7.158182e-52 | -8.615850e-47 |
| Msa0547400 | Msa0558880 | 0.811293 | 7.527101e-51 | -8.615850e-47 |
| Msa0549740 | Msa0558880 | 0.803301 | 3.721714e-49 | -8.615850e-47 |
| Msa0558880 | Msa0564930 | 0.824070 | 9.850286e-54 | -8.615850e-47 |
| Msa0558880 | Msa0568820 | 0.802240 | 6.161045e-49 | -8.615850e-47 |
| Msa0558880 | Msa0571700 | 0.806736 | 7.115157e-50 | -8.615850e-47 |
| Msa0558880 | Msa0576600 | 0.836196 | 1.078461e-56 | -8.615850e-47 |
| Msa0558880 | Msa0579340 | 0.810138 | 1.338044e-50 | -8.615850e-47 |
| Msa0558880 | Msa0591770 | 0.810074 | 1.381172e-50 | -8.615850e-47 |
| Msa0558880 | Msa0606060 | 0.803437 | 3.487238e-49 | -8.615850e-47 |
| Msa0558880 | Msa0607280 | 0.805810 | 1.115433e-49 | -8.615850e-47 |
| Msa0558880 | Msa0611550 | 0.804070 | 2.577434e-49 | -8.615850e-47 |
| Msa0558880 | Msa0614230 | 0.803164 | 3.973288e-49 | -8.615850e-47 |
| Msa0558880 | Msa0617830 | 0.830068 | 3.615397e-55 | -8.615850e-47 |
| Msa0558880 | Msa0618010 | 0.816200 | 6.251198e-52 | -8.615850e-47 |
| Msa0558880 | Msa0619070 | 0.808501 | 3.003342e-50 | -8.615850e-47 |
| Msa0558880 | Msa0619980 | 0.814658 | 1.377145e-51 | -8.615850e-47 |
| Msa0558880 | Msa0620640 | 0.833951 | 3.970551e-56 | -8.615850e-47 |
| Msa0558880 | Msa0621890 | 0.820519 | 6.570406e-53 | -8.615850e-47 |
| Msa0558880 | Msa0622340 | 0.801445 | 8.974514e-49 | -8.615850e-47 |
| Msa0558880 | Msa0638280 | 0.825158 | 5.460562e-54 | -8.615850e-47 |
| Msa0558880 | Msa0638320 | 0.827120 | 1.864144e-54 | -8.615850e-47 |
| Msa0558880 | Msa0642650 | 0.805946 | 1.044321e-49 | -8.615850e-47 |
| Msa0558880 | Msa0647000 | 0.804218 | 2.400179e-49 | -8.615850e-47 |
| Msa0558880 | Msa0650650 | 0.801770 | 7.695849e-49 | -8.615850e-47 |
| Msa0558880 | Msa0652980 | 0.803490 | 3.401279e-49 | -8.615850e-47 |
| Msa0558880 | Msa0653710 | 0.823706 | 1.198958e-53 | -8.615850e-47 |
| Msa0558880 | Msa0654060 | 0.846325 | 2.332126e-59 | -8.615850e-47 |
| Msa0558880 | Msa0655660 | -0.803453 | 3.461710e-49 | -8.615850e-47 |
| Msa0558880 | Msa0656270 | 0.824205 | 9.156056e-54 | -8.615850e-47 |
| Msa0558880 | Msa0656680 | 0.824390 | 8.285702e-54 | -8.615850e-47 |
| Msa0558880 | Msa0669850 | 0.824193 | 9.217703e-54 | -8.615850e-47 |
| Msa0558880 | Msa0677270 | 0.829065 | 6.341991e-55 | -8.615850e-47 |
| Msa0558880 | Msa0681890 | 0.800029 | 1.745708e-48 | -8.615850e-47 |
| Msa0558880 | Msa0686610 | 0.806325 | 8.691681e-50 | -8.615850e-47 |
| Msa0558880 | Msa0694250 | 0.826099 | 3.267386e-54 | -8.615850e-47 |
| Msa0558880 | Msa0700070 | 0.829551 | 4.833315e-55 | -8.615850e-47 |
| Msa0558880 | Msa0706370 | 0.817971 | 2.499870e-52 | -8.615850e-47 |
| Msa0558880 | Msa0714340 | 0.824893 | 6.304639e-54 | -8.615850e-47 |
| Msa0558880 | Msa0714380 | 0.808240 | 3.412895e-50 | -8.615850e-47 |
| Msa0558880 | Msa0714600 | 0.818190 | 2.231068e-52 | -8.615850e-47 |
| Msa0558880 | Msa0723140 | 0.805353 | 1.390767e-49 | -8.615850e-47 |
| Msa0558880 | Msa0724050 | 0.829436 | 5.152630e-55 | -8.615850e-47 |
| Msa0558880 | Msa0734660 | 0.805246 | 1.464246e-49 | -8.615850e-47 |
| Msa0558880 | Msa0739120 | 0.804621 | 1.978056e-49 | -8.615850e-47 |
| Msa0558880 | Msa0743640 | 0.803596 | 3.232469e-49 | -8.615850e-47 |
| Msa0558880 | Msa0756310 | 0.812757 | 3.610543e-51 | -8.615850e-47 |
| Msa0558880 | Msa0763880 | 0.828622 | 8.114869e-55 | -8.615850e-47 |
| Msa0558880 | Msa0763910 | 0.808840 | 2.541854e-50 | -8.615850e-47 |
| Msa0558880 | Msa0772020 | 0.814458 | 1.524831e-51 | -8.615850e-47 |
| Msa0558880 | Msa0787720 | 0.810467 | 1.136064e-50 | -8.615850e-47 |
| Msa0558880 | Msa0788710 | 0.812996 | 3.199658e-51 | -8.615850e-47 |
| Msa0558880 | Msa0789270 | 0.840605 | 7.864471e-58 | -8.615850e-47 |
| Msa0558880 | Msa0789280 | 0.835181 | 1.948604e-56 | -8.615850e-47 |
| Msa0558880 | Msa0789290 | 0.832099 | 1.146991e-55 | -8.615850e-47 |
| Msa0558880 | Msa0789300 | 0.830349 | 3.088071e-55 | -8.615850e-47 |
| Msa0558880 | Msa0790390 | -0.832624 | 8.498287e-56 | -8.615850e-47 |
| Msa0558880 | Msa0810020 | 0.809581 | 1.762842e-50 | -8.615850e-47 |
| Msa0558880 | Msa0812660 | 0.805352 | 1.391645e-49 | -8.615850e-47 |
| Msa0558880 | Msa0833940 | 0.806691 | 7.275910e-50 | -8.615850e-47 |
| Msa0558880 | Msa0837990 | 0.802594 | 5.208891e-49 | -8.615850e-47 |
| Msa0558880 | Msa0850500 | 0.819308 | 1.243588e-52 | -8.615850e-47 |
| Msa0558880 | Msa0870620 | 0.806072 | 9.825028e-50 | -8.615850e-47 |
| Msa0558880 | Msa0870630 | 0.803019 | 4.256464e-49 | -8.615850e-47 |
| Msa0558880 | Msa0877410 | 0.805261 | 1.454187e-49 | -8.615850e-47 |
| Msa0558880 | Msa0890250 | 0.811097 | 8.299701e-51 | -8.615850e-47 |
| Msa0558880 | Msa0899230 | 0.809772 | 1.604287e-50 | -8.615850e-47 |
| Msa0558880 | Msa0903730 | 0.804129 | 2.505653e-49 | -8.615850e-47 |
| Msa0558880 | Msa0907700 | 0.815285 | 9.996267e-52 | -8.615850e-47 |
| Msa0558880 | Msa0908170 | 0.821678 | 3.554406e-53 | -8.615850e-47 |
| Msa0558880 | Msa0909710 | 0.800712 | 1.267453e-48 | -8.615850e-47 |
| Msa0558880 | Msa0910980 | -0.816236 | 6.137365e-52 | -8.615850e-47 |
| Msa0558880 | Msa0922540 | 0.800356 | 1.497693e-48 | -8.615850e-47 |
| Msa0558880 | Msa0925160 | 0.810432 | 1.155845e-50 | -8.615850e-47 |
| Msa0558880 | Msa0942730 | 0.815125 | 1.085286e-51 | -8.615850e-47 |
| Msa0558880 | Msa0944770 | 0.802018 | 6.845313e-49 | -8.615850e-47 |
| Msa0558880 | Msa0958020 | 0.817412 | 3.341937e-52 | -8.615850e-47 |
| Msa0558880 | Msa0971860 | 0.812495 | 4.119356e-51 | -8.615850e-47 |
| Msa0558880 | Msa0973230 | 0.810621 | 1.052560e-50 | -8.615850e-47 |
| Msa0558880 | Msa0978000 | 0.806578 | 7.684184e-50 | -8.615850e-47 |
| Msa0558880 | Msa0979550 | 0.812691 | 3.732103e-51 | -8.615850e-47 |
| Msa0558880 | Msa0988480 | 0.804470 | 2.127603e-49 | -8.615850e-47 |
| Msa0558880 | Msa0990520 | 0.811149 | 8.087947e-51 | -8.615850e-47 |
| Msa0558880 | Msa0993530 | 0.808787 | 2.608226e-50 | -8.615850e-47 |
| Msa0558880 | Msa1002040 | 0.803481 | 3.415771e-49 | -8.615850e-47 |
| Msa0558880 | Msa1015060 | 0.811783 | 5.889989e-51 | -8.615850e-47 |
| Msa0558880 | Msa1018790 | 0.801926 | 7.149210e-49 | -8.615850e-47 |
| Msa0558880 | Msa1026760 | 0.823859 | 1.103625e-53 | -8.615850e-47 |
| Msa0558880 | Msa1026790 | 0.828883 | 7.019185e-55 | -8.615850e-47 |
| Msa0558880 | Msa1032350 | 0.800362 | 1.493690e-48 | -8.615850e-47 |
| Msa0558880 | Msa1033560 | 0.808335 | 3.257529e-50 | -8.615850e-47 |
| Msa0558880 | Msa1037700 | -0.825180 | 5.394723e-54 | -8.615850e-47 |
| Msa0558880 | Msa1038320 | 0.826808 | 2.213626e-54 | -8.615850e-47 |
| Msa0558880 | Msa1040890 | 0.805539 | 1.271420e-49 | -8.615850e-47 |
| Msa0558880 | Msa1043870 | 0.807900 | 4.031667e-50 | -8.615850e-47 |
| Msa0558880 | Msa1044340 | 0.805284 | 1.437917e-49 | -8.615850e-47 |
| Msa0558880 | Msa1051680 | 0.807126 | 5.884974e-50 | -8.615850e-47 |
| Msa0558880 | Msa1069300 | 0.810453 | 1.144237e-50 | -8.615850e-47 |
| Msa0558880 | Msa1072350 | 0.823205 | 1.569657e-53 | -8.615850e-47 |
| Msa0558880 | Msa1072460 | -0.812934 | 3.302731e-51 | -8.615850e-47 |
| Msa0558880 | Msa1097380 | 0.818026 | 2.429650e-52 | -8.615850e-47 |
| Msa0558880 | Msa1118140 | 0.840297 | 9.464291e-58 | -8.615850e-47 |
| Msa0558880 | Msa1130210 | -0.849254 | 3.638394e-60 | -8.615850e-47 |
| Msa0558880 | Msa1150230 | 0.817947 | 2.532161e-52 | -8.615850e-47 |
| Msa0558880 | Msa1154160 | 0.811608 | 6.430778e-51 | -8.615850e-47 |
| Msa0558880 | Msa1159360 | 0.849282 | 3.574232e-60 | -8.615850e-47 |
| Msa0558880 | Msa1160400 | 0.802599 | 5.198107e-49 | -8.615850e-47 |
| Msa0558880 | Msa1171690 | 0.818475 | 1.922573e-52 | -8.615850e-47 |
| Msa0558880 | Msa1172590 | 0.807586 | 4.702733e-50 | -8.615850e-47 |
| Msa0558880 | Msa1206020 | 0.815702 | 8.074570e-52 | -8.615850e-47 |
| Msa0558880 | Msa1210770 | 0.816833 | 4.511401e-52 | -8.615850e-47 |
| Msa0558880 | Msa1217660 | 0.825167 | 5.433687e-54 | -8.615850e-47 |
| Msa0558880 | Msa1217810 | 0.819401 | 1.183927e-52 | -8.615850e-47 |
| Msa0558880 | Msa1217830 | 0.802627 | 5.129189e-49 | -8.615850e-47 |
| Msa0558880 | Msa1217860 | 0.802383 | 5.757430e-49 | -8.615850e-47 |
| Msa0558880 | Msa1218650 | 0.810125 | 1.346583e-50 | -8.615850e-47 |
| Msa0558880 | Msa1237030 | 0.807515 | 4.867027e-50 | -8.615850e-47 |
| Msa0558880 | Msa1238490 | 0.802306 | 5.972418e-49 | -8.615850e-47 |
| Msa0558880 | Msa1265960 | 0.825604 | 4.282134e-54 | -8.615850e-47 |
| Msa0558880 | Msa1280130 | 0.812004 | 5.272721e-51 | -8.615850e-47 |
| Msa0558880 | Msa1282920 | 0.809634 | 1.717069e-50 | -8.615850e-47 |
| Msa0558880 | Msa1292730 | 0.805696 | 1.178494e-49 | -8.615850e-47 |
| Msa0558880 | Msa1297090 | 0.825206 | 5.319322e-54 | -8.615850e-47 |
| Msa0558880 | Msa1303160 | 0.820609 | 6.266537e-53 | -8.615850e-47 |
| Msa0558880 | Msa1323060 | 0.809406 | 1.922187e-50 | -8.615850e-47 |
| Msa0558880 | Msa1328850 | 0.819322 | 1.234093e-52 | -8.615850e-47 |
| Msa0558880 | Msa1335720 | 0.803120 | 4.057379e-49 | -8.615850e-47 |
| Msa0558880 | Msa1335970 | -0.804552 | 2.045077e-49 | -8.615850e-47 |
| Msa0558880 | Msa1341930 | 0.805837 | 1.100692e-49 | -8.615850e-47 |
| Msa0558880 | Msa1343820 | 0.808106 | 3.644627e-50 | -8.615850e-47 |
| Msa0558880 | Msa1362510 | 0.817711 | 2.861993e-52 | -8.615850e-47 |
| Msa0558880 | Msa1374440 | 0.801352 | 9.377380e-49 | -8.615850e-47 |
| Msa0558880 | Msa1382720 | 0.800361 | 1.494021e-48 | -8.615850e-47 |
| Msa0558880 | Msa1397970 | 0.831958 | 1.242806e-55 | -8.615850e-47 |
| Msa0558880 | Msa1403580 | -0.828063 | 1.106861e-54 | -8.615850e-47 |
| Msa0558880 | Msa1408790 | 0.800411 | 1.459581e-48 | -8.615850e-47 |
| Msa0558880 | Msa1419110 | 0.810815 | 9.556319e-51 | -8.615850e-47 |
| Msa0558880 | Msa1421870 | 0.810520 | 1.106547e-50 | -8.615850e-47 |
| Msa0558880 | Msa1422270 | 0.801288 | 9.662658e-49 | -8.615850e-47 |
| Msa0558880 | Msa1423450 | 0.801819 | 7.522574e-49 | -8.615850e-47 |
| Msa0558880 | Msa1425010 | 0.800879 | 1.171843e-48 | -8.615850e-47 |
| Msa0558880 | Msa1427830 | 0.840960 | 6.347476e-58 | -8.615850e-47 |
| Msa0558880 | Msa1431000 | 0.833890 | 4.111859e-56 | -8.615850e-47 |
| Msa0558880 | Msa1439230 | 0.814313 | 1.641774e-51 | -8.615850e-47 |
| Msa0558880 | Msa1439960 | 0.808082 | 3.688561e-50 | -8.615850e-47 |
| Msa0558880 | Msa1440610 | 0.803197 | 3.910065e-49 | -8.615850e-47 |
| Msa0558880 | Msa1443290 | -0.825396 | 4.796090e-54 | -8.615850e-47 |
| Msa0558880 | Msa1447560 | 0.808991 | 2.358666e-50 | -8.615850e-47 |
| Msa0558880 | Msa1449880 | 0.806328 | 8.677001e-50 | -8.615850e-47 |
| Msa0558880 | Msa1450020 | 0.811982 | 5.331747e-51 | -8.615850e-47 |
| Msa0558880 | Msa1453620 | 0.814539 | 1.463006e-51 | -8.615850e-47 |
| Msa0558880 | Msa1454110 | 0.845909 | 3.025846e-59 | -8.615850e-47 |
| Msa0558880 | Msa1456810 | 0.805947 | 1.043582e-49 | -8.615850e-47 |
| Msa0558880 | Msa1458920 | 0.800952 | 1.132302e-48 | -8.615850e-47 |
| Msa0558880 | Msa1464560 | 0.812206 | 4.764817e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 6 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCAAGAGTCGTCAGCTTC+AGG | 0.341073 | 4_1:+57914955 | Msa0558870:CDS |
| GTTCTGAGATGCATTCAAAT+AGG | 0.382160 | 4_1:+57914805 | Msa0558870:CDS |
| AAAACAACATCTAACATTGA+TGG | 0.412438 | 4_1:-57914862 | Msa0558880:CDS |
| CTGACGACTCTTGCAACTCT+TGG | 0.431973 | 4_1:-57914948 | Msa0558880:CDS |
| GAGTCGTCAGCTTCAGGAGG+AGG | 0.457899 | 4_1:+57914961 | Msa0558870:CDS |
| CAAGAGTCGTCAGCTTCAGG+AGG | 0.635040 | 4_1:+57914958 | Msa0558870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCAAATATGTAATGTTT+CGG | + | chr4_1:57915352-57915371 | None:intergenic | 15.0% |
| !! | AAACATTACATATTTGATTA+AGG | - | chr4_1:57915352-57915371 | Msa0558880:intron | 15.0% |
| !! | TAATCAAATATGTAATGTTT+CGG | + | chr4_1:57915352-57915371 | None:intergenic | 15.0% |
| !! | AAACATTACATATTTGATTA+AGG | - | chr4_1:57915352-57915371 | Msa0558880:intron | 15.0% |
| !! | TTATTGAGTTACTTACATAA+TGG | + | chr4_1:57914947-57914966 | Msa0558870:CDS | 20.0% |
| !! | CAATTCTGATAAAAAAAGTA+TGG | - | chr4_1:57915325-57915344 | Msa0558880:intron | 20.0% |
| !! | TTATTGAGTTACTTACATAA+TGG | + | chr4_1:57914947-57914966 | Msa0558870:CDS | 20.0% |
| !! | CAATTCTGATAAAAAAAGTA+TGG | - | chr4_1:57915325-57915344 | Msa0558880:intron | 20.0% |
| ! | GATCATGTAAATGTATTACA+AGG | - | chr4_1:57914915-57914934 | Msa0558880:CDS | 25.0% |
| !! | TTAATCTTTGAGAATTCAAG+TGG | - | chr4_1:57915048-57915067 | Msa0558880:intron | 25.0% |
| !! | ATTTTATACTTATGCACAGT+TGG | - | chr4_1:57915164-57915183 | Msa0558880:intron | 25.0% |
| ! | CATAAAATCTTGTATATACC+AGG | - | chr4_1:57915216-57915235 | Msa0558880:intron | 25.0% |
| !! | AAACCAGCATTTTTATTCAA+CGG | + | chr4_1:57915469-57915488 | None:intergenic | 25.0% |
| !!! | AATAAAAATGCTGGTTTTAG+AGG | - | chr4_1:57915472-57915491 | Msa0558880:intron | 25.0% |
| ! | AAAACAACATCTAACATTGA+TGG | - | chr4_1:57915526-57915545 | Msa0558880:intron | 25.0% |
| ! | GATCATGTAAATGTATTACA+AGG | - | chr4_1:57914915-57914934 | Msa0558880:CDS | 25.0% |
| !! | TTAATCTTTGAGAATTCAAG+TGG | - | chr4_1:57915048-57915067 | Msa0558880:intron | 25.0% |
| !! | ATTTTATACTTATGCACAGT+TGG | - | chr4_1:57915164-57915183 | Msa0558880:intron | 25.0% |
| ! | CATAAAATCTTGTATATACC+AGG | - | chr4_1:57915216-57915235 | Msa0558880:intron | 25.0% |
| !! | AAACCAGCATTTTTATTCAA+CGG | + | chr4_1:57915469-57915488 | None:intergenic | 25.0% |
| !!! | AATAAAAATGCTGGTTTTAG+AGG | - | chr4_1:57915472-57915491 | Msa0558880:intron | 25.0% |
| ! | AAAACAACATCTAACATTGA+TGG | - | chr4_1:57915526-57915545 | Msa0558880:intron | 25.0% |
| CTAGCATCATACAATAAACA+CGG | + | chr4_1:57914860-57914879 | Msa0558870:CDS | 30.0% | |
| ! | ATGATGCTAGTGTATTTTAC+AGG | - | chr4_1:57914870-57914889 | Msa0558880:CDS | 30.0% |
| ! | TGATGCTAGTGTATTTTACA+GGG | - | chr4_1:57914871-57914890 | Msa0558880:CDS | 30.0% |
| ! | TGGAAATTTCTAAGAGCTTA+AGG | + | chr4_1:57915111-57915130 | Msa0558870:three_prime_UTR | 30.0% |
| AAGCTCTTAGAAATTTCCAA+TGG | - | chr4_1:57915112-57915131 | Msa0558880:intron | 30.0% | |
| AAAATCTTGTATATACCAGG+AGG | - | chr4_1:57915219-57915238 | Msa0558880:intron | 30.0% | |
| ! | GGGTATTGTAAAATGAATAC+TGG | + | chr4_1:57915251-57915270 | None:intergenic | 30.0% |
| CTAGCATCATACAATAAACA+CGG | + | chr4_1:57914860-57914879 | Msa0558870:CDS | 30.0% | |
| ! | ATGATGCTAGTGTATTTTAC+AGG | - | chr4_1:57914870-57914889 | Msa0558880:CDS | 30.0% |
| ! | TGATGCTAGTGTATTTTACA+GGG | - | chr4_1:57914871-57914890 | Msa0558880:CDS | 30.0% |
| ! | TGGAAATTTCTAAGAGCTTA+AGG | + | chr4_1:57915111-57915130 | Msa0558870:three_prime_UTR | 30.0% |
| AAGCTCTTAGAAATTTCCAA+TGG | - | chr4_1:57915112-57915131 | Msa0558880:intron | 30.0% | |
| AAAATCTTGTATATACCAGG+AGG | - | chr4_1:57915219-57915238 | Msa0558880:intron | 30.0% | |
| ! | GGGTATTGTAAAATGAATAC+TGG | + | chr4_1:57915251-57915270 | None:intergenic | 30.0% |
| ! | TTTTACAGGGAACATCACTA+AGG | - | chr4_1:57914884-57914903 | Msa0558880:CDS | 35.0% |
| ! | AAGTATGTGTAGTCACTTTG+GGG | + | chr4_1:57915271-57915290 | None:intergenic | 35.0% |
| ! | CAAGTATGTGTAGTCACTTT+GGG | + | chr4_1:57915272-57915291 | None:intergenic | 35.0% |
| ACAAGTATGTGTAGTCACTT+TGG | + | chr4_1:57915273-57915292 | None:intergenic | 35.0% | |
| ! | GAGTTTGTAGACATTTCTAG+AGG | + | chr4_1:57915306-57915325 | None:intergenic | 35.0% |
| TTGCCGTTGAATAAAAATGC+TGG | - | chr4_1:57915463-57915482 | Msa0558880:intron | 35.0% | |
| !!! | AAAAATGCTGGTTTTAGAGG+TGG | - | chr4_1:57915475-57915494 | Msa0558880:intron | 35.0% |
| !!! | AAAATGCTGGTTTTAGAGGT+GGG | - | chr4_1:57915476-57915495 | Msa0558880:intron | 35.0% |
| ! | TTTTACAGGGAACATCACTA+AGG | - | chr4_1:57914884-57914903 | Msa0558880:CDS | 35.0% |
| ! | AAGTATGTGTAGTCACTTTG+GGG | + | chr4_1:57915271-57915290 | None:intergenic | 35.0% |
| ! | CAAGTATGTGTAGTCACTTT+GGG | + | chr4_1:57915272-57915291 | None:intergenic | 35.0% |
| ACAAGTATGTGTAGTCACTT+TGG | + | chr4_1:57915273-57915292 | None:intergenic | 35.0% | |
| ! | GAGTTTGTAGACATTTCTAG+AGG | + | chr4_1:57915306-57915325 | None:intergenic | 35.0% |
| TTGCCGTTGAATAAAAATGC+TGG | - | chr4_1:57915463-57915482 | Msa0558880:intron | 35.0% | |
| !!! | AAAAATGCTGGTTTTAGAGG+TGG | - | chr4_1:57915475-57915494 | Msa0558880:intron | 35.0% |
| !!! | AAAATGCTGGTTTTAGAGGT+GGG | - | chr4_1:57915476-57915495 | Msa0558880:intron | 35.0% |
| ! | ACTCGTGAGTTTTCTACCAT+TGG | + | chr4_1:57915131-57915150 | Msa0558870:three_prime_UTR | 40.0% |
| ! | ACTCGTGAGTTTTCTACCAT+TGG | + | chr4_1:57915131-57915150 | Msa0558870:three_prime_UTR | 40.0% |
| CTATGGTTGAAGCTCGCTAA+AGG | - | chr4_1:57914834-57914853 | Msa0558880:CDS | 45.0% | |
| !!! | GAATACTGGTTTTGACCTCC+TGG | + | chr4_1:57915237-57915256 | None:intergenic | 45.0% |
| !!! | TAGCTTTTAGCGAGCACTGA+TGG | - | chr4_1:57915375-57915394 | Msa0558880:intron | 45.0% |
| CTATGGTTGAAGCTCGCTAA+AGG | - | chr4_1:57914834-57914853 | Msa0558880:CDS | 45.0% | |
| !!! | GAATACTGGTTTTGACCTCC+TGG | + | chr4_1:57915237-57915256 | None:intergenic | 45.0% |
| !!! | TAGCTTTTAGCGAGCACTGA+TGG | - | chr4_1:57915375-57915394 | Msa0558880:intron | 45.0% |
| TTGCAAGAGTCGTCAGCTTC+AGG | + | chr4_1:57915436-57915455 | None:intergenic | 50.0% | |
| CTGACGACTCTTGCAACTCT+TGG | - | chr4_1:57915440-57915459 | Msa0558880:intron | 50.0% | |
| !!! | GGTTTTAGAGGTGGGCAAAG+AGG | - | chr4_1:57915484-57915503 | Msa0558880:intron | 50.0% |
| TTGCAAGAGTCGTCAGCTTC+AGG | + | chr4_1:57915436-57915455 | None:intergenic | 50.0% | |
| CTGACGACTCTTGCAACTCT+TGG | - | chr4_1:57915440-57915459 | Msa0558880:intron | 50.0% | |
| !!! | GGTTTTAGAGGTGGGCAAAG+AGG | - | chr4_1:57915484-57915503 | Msa0558880:intron | 50.0% |
| CAAGAGTCGTCAGCTTCAGG+AGG | + | chr4_1:57915433-57915452 | None:intergenic | 55.0% | |
| CAAGAGTCGTCAGCTTCAGG+AGG | + | chr4_1:57915433-57915452 | None:intergenic | 55.0% | |
| GAGTCGTCAGCTTCAGGAGG+AGG | + | chr4_1:57915430-57915449 | None:intergenic | 60.0% | |
| GAGTCGTCAGCTTCAGGAGG+AGG | + | chr4_1:57915430-57915449 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 57914819 | 57915591 | 57914819 | ID=Msa0558880;Name=Msa0558880 |
| chr4_1 | mRNA | 57914819 | 57915591 | 57914819 | ID=Msa0558880-mRNA-1;Parent=Msa0558880;Name=Msa0558880-mRNA-1;_AED=0.97;_eAED=1.00;_QI=0|0|0|0.66|1|1|3|0|72 |
| chr4_1 | exon | 57915587 | 57915591 | 57915587 | ID=Msa0558880-mRNA-1:exon:17638;Parent=Msa0558880-mRNA-1 |
| chr4_1 | exon | 57915344 | 57915350 | 57915344 | ID=Msa0558880-mRNA-1:exon:17637;Parent=Msa0558880-mRNA-1 |
| chr4_1 | exon | 57914819 | 57915025 | 57914819 | ID=Msa0558880-mRNA-1:exon:17636;Parent=Msa0558880-mRNA-1 |
| chr4_1 | CDS | 57915587 | 57915591 | 57915587 | ID=Msa0558880-mRNA-1:cds;Parent=Msa0558880-mRNA-1 |
| chr4_1 | CDS | 57915344 | 57915350 | 57915344 | ID=Msa0558880-mRNA-1:cds;Parent=Msa0558880-mRNA-1 |
| chr4_1 | CDS | 57914819 | 57915025 | 57914819 | ID=Msa0558880-mRNA-1:cds;Parent=Msa0558880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
