Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0793090 | XP_003592799.2 | 97.015 | 402 | 11 | 1 | 1 | 401 | 1 | 402 | 0.0 | 808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0793090 | sp|Q9MAT6|HMG15_ARATH | 60.000 | 380 | 114 | 11 | 1 | 362 | 1 | 360 | 1.31e-133 | 393 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0793090 | G7IF34 | 97.015 | 402 | 11 | 1 | 1 | 401 | 1 | 402 | 0.0 | 808 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0793090 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000780 | Msa0793090 | 0.811759 | 5.961568e-51 | -8.615850e-47 |
| Msa0001540 | Msa0793090 | 0.821472 | 3.965265e-53 | -8.615850e-47 |
| Msa0009800 | Msa0793090 | 0.845361 | 4.259898e-59 | -8.615850e-47 |
| Msa0009890 | Msa0793090 | 0.837637 | 4.622430e-57 | -8.615850e-47 |
| Msa0018870 | Msa0793090 | 0.801251 | 9.832033e-49 | -8.615850e-47 |
| Msa0028950 | Msa0793090 | 0.815556 | 8.700708e-52 | -8.615850e-47 |
| Msa0030400 | Msa0793090 | 0.811950 | 5.416002e-51 | -8.615850e-47 |
| Msa0034320 | Msa0793090 | 0.811000 | 8.714605e-51 | -8.615850e-47 |
| Msa0040410 | Msa0793090 | 0.802572 | 5.265381e-49 | -8.615850e-47 |
| Msa0044380 | Msa0793090 | 0.804908 | 1.723733e-49 | -8.615850e-47 |
| Msa0046060 | Msa0793090 | 0.890439 | 9.846892e-74 | -8.615850e-47 |
| Msa0046360 | Msa0793090 | 0.802177 | 6.348765e-49 | -8.615850e-47 |
| Msa0049990 | Msa0793090 | 0.800955 | 1.130226e-48 | -8.615850e-47 |
| Msa0065690 | Msa0793090 | 0.803404 | 3.543318e-49 | -8.615850e-47 |
| Msa0074220 | Msa0793090 | 0.800066 | 1.715445e-48 | -8.615850e-47 |
| Msa0081300 | Msa0793090 | 0.802369 | 5.798030e-49 | -8.615850e-47 |
| Msa0084630 | Msa0793090 | 0.800964 | 1.125452e-48 | -8.615850e-47 |
| Msa0092660 | Msa0793090 | 0.802103 | 6.576191e-49 | -8.615850e-47 |
| Msa0092730 | Msa0793090 | 0.801657 | 8.119870e-49 | -8.615850e-47 |
| Msa0094670 | Msa0793090 | 0.826932 | 2.068330e-54 | -8.615850e-47 |
| Msa0097730 | Msa0793090 | 0.800290 | 1.544455e-48 | -8.615850e-47 |
| Msa0107460 | Msa0793090 | 0.809447 | 1.883561e-50 | -8.615850e-47 |
| Msa0112290 | Msa0793090 | 0.822987 | 1.764991e-53 | -8.615850e-47 |
| Msa0115950 | Msa0793090 | 0.804002 | 2.662202e-49 | -8.615850e-47 |
| Msa0604700 | Msa0793090 | 0.817813 | 2.713535e-52 | -8.615850e-47 |
| Msa0607300 | Msa0793090 | 0.813796 | 2.134768e-51 | -8.615850e-47 |
| Msa0609990 | Msa0793090 | 0.800752 | 1.243866e-48 | -8.615850e-47 |
| Msa0629500 | Msa0793090 | 0.841860 | 3.677513e-58 | -8.615850e-47 |
| Msa0637850 | Msa0793090 | 0.809657 | 1.697944e-50 | -8.615850e-47 |
| Msa0638500 | Msa0793090 | 0.819255 | 1.278223e-52 | -8.615850e-47 |
| Msa0645820 | Msa0793090 | 0.804639 | 1.961436e-49 | -8.615850e-47 |
| Msa0648630 | Msa0793090 | 0.807084 | 6.007714e-50 | -8.615850e-47 |
| Msa0650360 | Msa0793090 | 0.848399 | 6.282624e-60 | -8.615850e-47 |
| Msa0661490 | Msa0793090 | 0.803035 | 4.223354e-49 | -8.615850e-47 |
| Msa0667970 | Msa0793090 | 0.811694 | 6.158948e-51 | -8.615850e-47 |
| Msa0677840 | Msa0793090 | 0.843776 | 1.138183e-58 | -8.615850e-47 |
| Msa0690350 | Msa0793090 | 0.805829 | 1.105068e-49 | -8.615850e-47 |
| Msa0691100 | Msa0793090 | 0.804552 | 2.044684e-49 | -8.615850e-47 |
| Msa0697180 | Msa0793090 | 0.817107 | 3.915025e-52 | -8.615850e-47 |
| Msa0709480 | Msa0793090 | 0.801763 | 7.723971e-49 | -8.615850e-47 |
| Msa0720380 | Msa0793090 | 0.805637 | 1.212646e-49 | -8.615850e-47 |
| Msa0760950 | Msa0793090 | 0.808019 | 3.804527e-50 | -8.615850e-47 |
| Msa0767040 | Msa0793090 | 0.800848 | 1.188708e-48 | -8.615850e-47 |
| Msa0780140 | Msa0793090 | 0.811327 | 7.399741e-51 | -8.615850e-47 |
| Msa0789800 | Msa0793090 | 0.803035 | 4.224640e-49 | -8.615850e-47 |
| Msa0790180 | Msa0793090 | 0.808667 | 2.767075e-50 | -8.615850e-47 |
| Msa0793090 | Msa0794460 | 0.808617 | 2.836633e-50 | -8.615850e-47 |
| Msa0793090 | Msa0795850 | 0.801015 | 1.099181e-48 | -8.615850e-47 |
| Msa0793090 | Msa0824140 | 0.815319 | 9.823932e-52 | -8.615850e-47 |
| Msa0793090 | Msa0829570 | 0.828327 | 9.561316e-55 | -8.615850e-47 |
| Msa0793090 | Msa0833630 | 0.825629 | 4.222637e-54 | -8.615850e-47 |
| Msa0793090 | Msa0853920 | 0.809860 | 1.535751e-50 | -8.615850e-47 |
| Msa0793090 | Msa0863250 | 0.822458 | 2.343891e-53 | -8.615850e-47 |
| Msa0793090 | Msa0901140 | 0.816042 | 6.778854e-52 | -8.615850e-47 |
| Msa0793090 | Msa0929940 | 0.839650 | 1.395690e-57 | -8.615850e-47 |
| Msa0793090 | Msa0931730 | 0.813889 | 2.036842e-51 | -8.615850e-47 |
| Msa0793090 | Msa0966410 | 0.819099 | 1.387675e-52 | -8.615850e-47 |
| Msa0793090 | Msa0968780 | 0.824001 | 1.022430e-53 | -8.615850e-47 |
| Msa0793090 | Msa0975080 | 0.809232 | 2.094758e-50 | -8.615850e-47 |
| Msa0793090 | Msa1002980 | 0.819048 | 1.425297e-52 | -8.615850e-47 |
| Msa0793090 | Msa1029430 | 0.811168 | 8.012158e-51 | -8.615850e-47 |
| Msa0793090 | Msa1040070 | 0.805338 | 1.400655e-49 | -8.615850e-47 |
| Msa0793090 | Msa1052600 | 0.801855 | 7.394462e-49 | -8.615850e-47 |
| Msa0793090 | Msa1069960 | 0.814696 | 1.350656e-51 | -8.615850e-47 |
| Msa0793090 | Msa1080620 | 0.840171 | 1.021078e-57 | -8.615850e-47 |
| Msa0793090 | Msa1080690 | 0.842509 | 2.476171e-58 | -8.615850e-47 |
| Msa0793090 | Msa1080840 | 0.810309 | 1.228712e-50 | -8.615850e-47 |
| Msa0793090 | Msa1081700 | 0.806940 | 6.443763e-50 | -8.615850e-47 |
| Msa0793090 | Msa1081850 | 0.808170 | 3.531711e-50 | -8.615850e-47 |
| Msa0793090 | Msa1083460 | 0.823380 | 1.428975e-53 | -8.615850e-47 |
| Msa0793090 | Msa1084490 | 0.807071 | 6.044705e-50 | -8.615850e-47 |
| Msa0793090 | Msa1092430 | 0.801124 | 1.044044e-48 | -8.615850e-47 |
| Msa0793090 | Msa1118980 | 0.815971 | 7.033694e-52 | -8.615850e-47 |
| Msa0793090 | Msa1119860 | 0.824465 | 7.954258e-54 | -8.615850e-47 |
| Msa0793090 | Msa1126310 | 0.800633 | 1.315008e-48 | -8.615850e-47 |
| Msa0793090 | Msa1126910 | 0.817191 | 3.748136e-52 | -8.615850e-47 |
| Msa0793090 | Msa1130650 | 0.801318 | 9.527513e-49 | -8.615850e-47 |
| Msa0793090 | Msa1130730 | 0.808016 | 3.809701e-50 | -8.615850e-47 |
| Msa0793090 | Msa1131900 | 0.817462 | 3.256835e-52 | -8.615850e-47 |
| Msa0793090 | Msa1132820 | 0.831674 | 1.460464e-55 | -8.615850e-47 |
| Msa0793090 | Msa1144950 | 0.847358 | 1.216179e-59 | -8.615850e-47 |
| Msa0793090 | Msa1145370 | 0.818341 | 2.061902e-52 | -8.615850e-47 |
| Msa0793090 | Msa1166020 | 0.802206 | 6.262228e-49 | -8.615850e-47 |
| Msa0793090 | Msa1167160 | 0.815988 | 6.970058e-52 | -8.615850e-47 |
| Msa0793090 | Msa1222580 | 0.820747 | 5.826514e-53 | -8.615850e-47 |
| Msa0793090 | Msa1228880 | 0.813254 | 2.809215e-51 | -8.615850e-47 |
| Msa0793090 | Msa1235040 | 0.830838 | 2.344161e-55 | -8.615850e-47 |
| Msa0793090 | Msa1238700 | 0.823794 | 1.143042e-53 | -8.615850e-47 |
| Msa0793090 | Msa1258770 | 0.802187 | 6.318490e-49 | -8.615850e-47 |
| Msa0793090 | Msa1264560 | 0.801109 | 1.051376e-48 | -8.615850e-47 |
| Msa0793090 | Msa1305520 | 0.814165 | 1.770528e-51 | -8.615850e-47 |
| Msa0793090 | Msa1305650 | 0.833262 | 5.900704e-56 | -8.615850e-47 |
| Msa0793090 | Msa1309360 | 0.802219 | 6.224895e-49 | -8.615850e-47 |
| Msa0793090 | Msa1326000 | 0.807718 | 4.408085e-50 | -8.615850e-47 |
| Msa0793090 | Msa1344940 | 0.801726 | 7.858406e-49 | -8.615850e-47 |
| Msa0793090 | Msa1366400 | 0.810677 | 1.023350e-50 | -8.615850e-47 |
| Msa0793090 | Msa1373380 | 0.989938 | 2.533808e-180 | -8.615850e-47 |
| Msa0793090 | Msa1374850 | 0.805740 | 1.153588e-49 | -8.615850e-47 |
| Msa0793090 | Msa1375600 | 0.800754 | 1.242549e-48 | -8.615850e-47 |
| Msa0793090 | Msa1376560 | 0.802181 | 6.337411e-49 | -8.615850e-47 |
| Msa0793090 | Msa1393720 | 0.828171 | 1.042671e-54 | -8.615850e-47 |
| Msa0793090 | Msa1394900 | 0.822564 | 2.214431e-53 | -8.615850e-47 |
| Msa0793090 | Msa1406880 | 0.817318 | 3.509559e-52 | -8.615850e-47 |
| Msa0793090 | Msa1412520 | 0.829065 | 6.338799e-55 | -8.615850e-47 |
| Msa0793090 | Msa1416460 | 0.815267 | 1.009234e-51 | -8.615850e-47 |
| Msa0793090 | Msa1418600 | 0.810714 | 1.004909e-50 | -8.615850e-47 |
| Msa0793090 | Msa1420520 | 0.818291 | 2.115799e-52 | -8.615850e-47 |
| Msa0793090 | Msa1422490 | 0.832426 | 9.517979e-56 | -8.615850e-47 |
| Msa0793090 | Msa1422500 | 0.854765 | 9.896540e-62 | -8.615850e-47 |
| Msa0793090 | Msa1423190 | 0.822364 | 2.464260e-53 | -8.615850e-47 |
| Msa0793090 | Msa1430760 | 0.809255 | 2.070912e-50 | -8.615850e-47 |
| Msa0793090 | Msa1437320 | 0.841509 | 4.552359e-58 | -8.615850e-47 |
| Msa0793090 | Msa1438380 | 0.803006 | 4.281997e-49 | -8.615850e-47 |
| Msa0793090 | Msa1449680 | 0.807984 | 3.868937e-50 | -8.615850e-47 |
| Msa0793090 | Msa1451480 | 0.802428 | 5.637462e-49 | -8.615850e-47 |
| Msa0793090 | Msa1458330 | 0.831510 | 1.602629e-55 | -8.615850e-47 |
| Msa0793090 | Msa1464800 | 0.842254 | 2.893206e-58 | -8.615850e-47 |
| Msa0127080 | Msa0793090 | 0.801285 | 9.679161e-49 | -8.615850e-47 |
| Msa0130760 | Msa0793090 | 0.824176 | 9.302742e-54 | -8.615850e-47 |
| Msa0130800 | Msa0793090 | 0.812960 | 3.258455e-51 | -8.615850e-47 |
| Msa0137600 | Msa0793090 | 0.801219 | 9.984916e-49 | -8.615850e-47 |
| Msa0142000 | Msa0793090 | 0.823869 | 1.098113e-53 | -8.615850e-47 |
| Msa0143490 | Msa0793090 | 0.802632 | 5.116130e-49 | -8.615850e-47 |
| Msa0143980 | Msa0793090 | 0.806996 | 6.271421e-50 | -8.615850e-47 |
| Msa0147990 | Msa0793090 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
| Msa0157350 | Msa0793090 | 0.800709 | 1.269123e-48 | -8.615850e-47 |
| Msa0168960 | Msa0793090 | 0.803937 | 2.746978e-49 | -8.615850e-47 |
| Msa0171920 | Msa0793090 | 0.805424 | 1.344105e-49 | -8.615850e-47 |
| Msa0173610 | Msa0793090 | 0.819639 | 1.044757e-52 | -8.615850e-47 |
| Msa0173760 | Msa0793090 | 0.840616 | 7.812191e-58 | -8.615850e-47 |
| Msa0173850 | Msa0793090 | 0.817369 | 3.418280e-52 | -8.615850e-47 |
| Msa0175280 | Msa0793090 | 0.829532 | 4.885165e-55 | -8.615850e-47 |
| Msa0176710 | Msa0793090 | 0.816150 | 6.415685e-52 | -8.615850e-47 |
| Msa0181010 | Msa0793090 | 0.840265 | 9.648943e-58 | -8.615850e-47 |
| Msa0181020 | Msa0793090 | 0.866696 | 2.361458e-65 | -8.615850e-47 |
| Msa0183490 | Msa0793090 | 0.809015 | 2.331838e-50 | -8.615850e-47 |
| Msa0192020 | Msa0793090 | 0.809790 | 1.589513e-50 | -8.615850e-47 |
| Msa0192710 | Msa0793090 | 0.822828 | 1.922612e-53 | -8.615850e-47 |
| Msa0193000 | Msa0793090 | 0.801173 | 1.020048e-48 | -8.615850e-47 |
| Msa0206940 | Msa0793090 | 0.854015 | 1.630502e-61 | -8.615850e-47 |
| Msa0206970 | Msa0793090 | 0.801035 | 1.088509e-48 | -8.615850e-47 |
| Msa0218860 | Msa0793090 | 0.803214 | 3.879514e-49 | -8.615850e-47 |
| Msa0235180 | Msa0793090 | 0.818777 | 1.642276e-52 | -8.615850e-47 |
| Msa0367370 | Msa0793090 | 0.811269 | 7.619891e-51 | -8.615850e-47 |
| Msa0369780 | Msa0793090 | 0.818103 | 2.334645e-52 | -8.615850e-47 |
| Msa0371870 | Msa0793090 | 0.835774 | 1.379549e-56 | -8.615850e-47 |
| Msa0379390 | Msa0793090 | 0.813945 | 1.979507e-51 | -8.615850e-47 |
| Msa0380360 | Msa0793090 | 0.815257 | 1.014452e-51 | -8.615850e-47 |
| Msa0380440 | Msa0793090 | 0.811495 | 6.805636e-51 | -8.615850e-47 |
| Msa0380520 | Msa0793090 | 0.803500 | 3.383913e-49 | -8.615850e-47 |
| Msa0382500 | Msa0793090 | 0.820116 | 8.131480e-53 | -8.615850e-47 |
| Msa0387790 | Msa0793090 | 0.814393 | 1.576595e-51 | -8.615850e-47 |
| Msa0415930 | Msa0793090 | 0.805095 | 1.575221e-49 | -8.615850e-47 |
| Msa0417150 | Msa0793090 | 0.808590 | 2.873768e-50 | -8.615850e-47 |
| Msa0420800 | Msa0793090 | 0.818409 | 1.990508e-52 | -8.615850e-47 |
| Msa0426480 | Msa0793090 | 0.857280 | 1.818053e-62 | -8.615850e-47 |
| Msa0432680 | Msa0793090 | 0.825412 | 4.755536e-54 | -8.615850e-47 |
| Msa0437780 | Msa0793090 | 0.993147 | 9.129002e-198 | -8.615850e-47 |
| Msa0455200 | Msa0793090 | 0.816519 | 5.305092e-52 | -8.615850e-47 |
| Msa0463990 | Msa0793090 | 0.810296 | 1.237197e-50 | -8.615850e-47 |
| Msa0466340 | Msa0793090 | 0.830456 | 2.906798e-55 | -8.615850e-47 |
| Msa0467080 | Msa0793090 | 0.806877 | 6.644396e-50 | -8.615850e-47 |
| Msa0473010 | Msa0793090 | 0.826837 | 2.178472e-54 | -8.615850e-47 |
| Msa0480150 | Msa0793090 | 0.826884 | 2.122962e-54 | -8.615850e-47 |
| Msa0242290 | Msa0793090 | 0.801967 | 7.013461e-49 | -8.615850e-47 |
| Msa0250520 | Msa0793090 | 0.832282 | 1.033292e-55 | -8.615850e-47 |
| Msa0258380 | Msa0793090 | 0.811579 | 6.524252e-51 | -8.615850e-47 |
| Msa0269830 | Msa0793090 | 0.810842 | 9.428064e-51 | -8.615850e-47 |
| Msa0280140 | Msa0793090 | 0.841718 | 4.009718e-58 | -8.615850e-47 |
| Msa0280500 | Msa0793090 | 0.802100 | 6.585001e-49 | -8.615850e-47 |
| Msa0282860 | Msa0793090 | 0.801518 | 8.672261e-49 | -8.615850e-47 |
| Msa0288360 | Msa0793090 | 0.802779 | 4.770357e-49 | -8.615850e-47 |
| Msa0296000 | Msa0793090 | 0.815276 | 1.004533e-51 | -8.615850e-47 |
| Msa0308430 | Msa0793090 | 0.844365 | 7.908846e-59 | -8.615850e-47 |
| Msa0313800 | Msa0793090 | 0.825046 | 5.801795e-54 | -8.615850e-47 |
| Msa0327900 | Msa0793090 | 0.807146 | 5.828946e-50 | -8.615850e-47 |
| Msa0333900 | Msa0793090 | 0.835348 | 1.767911e-56 | -8.615850e-47 |
| Msa0334020 | Msa0793090 | 0.833670 | 4.668103e-56 | -8.615850e-47 |
| Msa0334980 | Msa0793090 | 0.804172 | 2.454302e-49 | -8.615850e-47 |
| Msa0340440 | Msa0793090 | 0.834556 | 2.799315e-56 | -8.615850e-47 |
| Msa0342620 | Msa0793090 | 0.816859 | 4.449664e-52 | -8.615850e-47 |
| Msa0362840 | Msa0793090 | 0.803241 | 3.828758e-49 | -8.615850e-47 |
| Msa0509540 | Msa0793090 | 0.812721 | 3.675962e-51 | -8.615850e-47 |
| Msa0512130 | Msa0793090 | 0.844573 | 6.955508e-59 | -8.615850e-47 |
| Msa0512310 | Msa0793090 | 0.815654 | 8.275713e-52 | -8.615850e-47 |
| Msa0517190 | Msa0793090 | 0.826729 | 2.312165e-54 | -8.615850e-47 |
| Msa0528740 | Msa0793090 | 0.840006 | 1.127329e-57 | -8.615850e-47 |
| Msa0528870 | Msa0793090 | 0.815016 | 1.147237e-51 | -8.615850e-47 |
| Msa0530930 | Msa0793090 | 0.805776 | 1.133628e-49 | -8.615850e-47 |
| Msa0559890 | Msa0793090 | 0.836097 | 1.142608e-56 | -8.615850e-47 |
| Msa0569930 | Msa0793090 | 0.807691 | 4.466659e-50 | -8.615850e-47 |
| Msa0579610 | Msa0793090 | 0.844266 | 8.410984e-59 | -8.615850e-47 |
| Msa0581190 | Msa0793090 | 0.805055 | 1.605678e-49 | -8.615850e-47 |
| Msa0581490 | Msa0793090 | 0.800260 | 1.566488e-48 | -8.615850e-47 |
| Msa0587900 | Msa0793090 | 0.832034 | 1.189928e-55 | -8.615850e-47 |
| Msa0589290 | Msa0793090 | 0.836945 | 6.947111e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0793090 | MtrunA17_Chr1g0213311 | 97.015 | 402 | 11 | 1 | 1 | 401 | 1 | 402 | 0.0 | 808 |
| Msa0793090 | MtrunA17_Chr7g0214501 | 49.835 | 303 | 93 | 6 | 85 | 381 | 1 | 250 | 3.50e-77 | 241 |
| Msa0793090 | MtrunA17_Chr3g0079841 | 44.690 | 226 | 104 | 5 | 24 | 247 | 29 | 235 | 3.80e-52 | 175 |
| Msa0793090 | MtrunA17_Chr3g0143581 | 51.064 | 141 | 66 | 2 | 23 | 162 | 19 | 157 | 1.74e-43 | 149 |
| Msa0793090 | MtrunA17_Chr3g0143571 | 46.259 | 147 | 77 | 1 | 191 | 337 | 23 | 167 | 3.25e-34 | 125 |
| Msa0793090 | MtrunA17_Chr7g0214491 | 65.882 | 85 | 28 | 1 | 1 | 84 | 1 | 85 | 6.05e-34 | 122 |
| Msa0793090 | MtrunA17_Chr5g0435401 | 22.662 | 278 | 181 | 8 | 66 | 320 | 70 | 336 | 3.19e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0793090 | AT1G04880.1 | 60.000 | 380 | 114 | 11 | 1 | 362 | 1 | 360 | 1.33e-134 | 393 |
| Msa0793090 | AT1G76110.1 | 44.643 | 336 | 162 | 8 | 2 | 334 | 12 | 326 | 9.28e-85 | 262 |
| Msa0793090 | AT3G13350.1 | 45.545 | 303 | 133 | 4 | 29 | 330 | 34 | 305 | 1.76e-82 | 255 |
| Msa0793090 | AT1G55650.1 | 36.562 | 320 | 154 | 7 | 12 | 330 | 11 | 282 | 1.75e-60 | 199 |
Find 112 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCACTTCTGTTTGGTTT+TGG | 0.220656 | 5_3:-5101023 | None:intergenic |
| ATTGCAGGATTCCTGTTATT+GGG | 0.246287 | 5_3:+5098186 | Msa0793090:intron |
| CACAGTGATCAACTGGGTTT+TGG | 0.268345 | 5_3:+5101900 | Msa0793090:three_prime_UTR |
| TATTGCAGGATTCCTGTTAT+TGG | 0.282044 | 5_3:+5098185 | Msa0793090:intron |
| TGTGGATTCATTGCCTGTTA+TGG | 0.326537 | 5_3:+5101720 | Msa0793090:CDS |
| GAAGCATTTGTAGCCGTTGA+TGG | 0.327945 | 5_3:-5098689 | None:intergenic |
| AATAATAGATTTGTTCATAA+TGG | 0.330253 | 5_3:-5098748 | None:intergenic |
| GTACCTCTCTTTGTCCTTCA+CGG | 0.336959 | 5_3:-5101497 | None:intergenic |
| TCAGTTTGAGGTGTTTGTTT+TGG | 0.337746 | 5_3:+5101934 | Msa0793090:three_prime_UTR |
| CACAAATCACAGTGATCAAC+TGG | 0.338301 | 5_3:+5101893 | Msa0793090:three_prime_UTR |
| GTATGTGAAAACTGCATCTT+TGG | 0.346993 | 5_3:-5098925 | None:intergenic |
| GTGGATTCATTGCCTGTTAT+GGG | 0.359014 | 5_3:+5101721 | Msa0793090:CDS |
| CGGCAGGATCTCAGGTTGTC+GGG | 0.362545 | 5_3:+5100787 | Msa0793090:CDS |
| AGAAAGAAGAAATGTTAGCT+AGG | 0.370972 | 5_3:+5101782 | Msa0793090:three_prime_UTR |
| TTCCGCGTCTGATCTCTAAA+TGG | 0.372840 | 5_3:+5102013 | Msa0793090:three_prime_UTR |
| AGATCATTAAAGATAGAAAA+TGG | 0.378478 | 5_3:+5098639 | Msa0793090:intron |
| GCTCAAAGCTGTCTCTTTCA+TGG | 0.381404 | 5_3:-5097874 | None:intergenic |
| GCATTCAACATGTCAGTATC+TGG | 0.384305 | 5_3:-5101607 | None:intergenic |
| TGCATCTTTGGAGCAGGAGC+TGG | 0.387029 | 5_3:-5098913 | None:intergenic |
| CAGGTTGTCGGGGTCATTGA+TGG | 0.395002 | 5_3:+5100798 | Msa0793090:CDS |
| GCTGAATATATGATCCTAAC+AGG | 0.396426 | 5_3:+5101976 | Msa0793090:three_prime_UTR |
| TATCTAGTTACTGTCACAAT+TGG | 0.419081 | 5_3:+5100837 | Msa0793090:CDS |
| ATCTGTTTCAGCATCCTGTT+AGG | 0.421335 | 5_3:-5101990 | None:intergenic |
| TCAGCACCAACTCCCATAAC+AGG | 0.424034 | 5_3:-5101733 | None:intergenic |
| AAATTGTATCCACTTCTGTT+TGG | 0.426908 | 5_3:-5101029 | None:intergenic |
| CTCAGCAATGGGATCATCTT+CGG | 0.429472 | 5_3:+5100767 | Msa0793090:intron |
| TCATTGCCTGTTATGGGAGT+TGG | 0.435413 | 5_3:+5101727 | Msa0793090:CDS |
| ATCATCTTCGGCAGGATCTC+AGG | 0.435568 | 5_3:+5100779 | Msa0793090:CDS |
| ATTGATGGGAAATTTGATAG+TGG | 0.443834 | 5_3:+5100813 | Msa0793090:CDS |
| GAAAGAAGAAATGTTAGCTA+GGG | 0.444580 | 5_3:+5101783 | Msa0793090:three_prime_UTR |
| CTGTGATTTGTGCTTAAAGT+AGG | 0.451073 | 5_3:-5101882 | None:intergenic |
| AGAGAGGTACATAACAGAAA+TGG | 0.452384 | 5_3:+5101510 | Msa0793090:CDS |
| TCGGCAGGATCTCAGGTTGT+CGG | 0.453538 | 5_3:+5100786 | Msa0793090:CDS |
| TGTTAGCTAGGGAATGGAAT+AGG | 0.454932 | 5_3:+5101794 | Msa0793090:three_prime_UTR |
| TGTTGTTAGCAGGAACACTA+TGG | 0.456419 | 5_3:-5100923 | None:intergenic |
| GCTGTCTCTTTCATGGGTAA+TGG | 0.461532 | 5_3:-5097867 | None:intergenic |
| CAAGCTCTTCATACTTAGCT+TGG | 0.463066 | 5_3:+5097950 | Msa0793090:CDS |
| GAACATACCGGAAGTTGTAT+TGG | 0.464656 | 5_3:-5098789 | None:intergenic |
| TCATTCATTCATTGGCATCT+CGG | 0.469847 | 5_3:+5096301 | None:intergenic |
| TGGTGGGATGCTGGCAGCAC+AGG | 0.472613 | 5_3:-5100903 | None:intergenic |
| AACTGGACCAATACAACTTC+CGG | 0.475197 | 5_3:+5098782 | Msa0793090:CDS |
| AGTTACTGTCACAATTGGTT+CGG | 0.475294 | 5_3:+5100842 | Msa0793090:CDS |
| GGAAGGACCGAGAGATTAGT+AGG | 0.477594 | 5_3:+5101096 | Msa0793090:CDS |
| TTCACCTATGGCAACATATG+AGG | 0.483062 | 5_3:+5097911 | Msa0793090:CDS |
| AACATGTCAGTATCTGGTTC+AGG | 0.486501 | 5_3:-5101601 | None:intergenic |
| GCGGTCACGTTGTTGTTAGC+AGG | 0.489436 | 5_3:-5100933 | None:intergenic |
| CAAGCTAAGTATGAAGAGCT+TGG | 0.497014 | 5_3:-5097949 | None:intergenic |
| CTTTGGAGCAGGAGCTGGGA+TGG | 0.499860 | 5_3:-5098908 | None:intergenic |
| GGAACACTATGGTGGGATGC+TGG | 0.501068 | 5_3:-5100912 | None:intergenic |
| TTTAACTGTTGAAAGACAGC+TGG | 0.504737 | 5_3:-5098964 | None:intergenic |
| CCAGGGAGCCTACATGAACT+TGG | 0.508162 | 5_3:-5097997 | None:intergenic |
| TGATGACTATGAAGATGATA+AGG | 0.508495 | 5_3:+5101678 | Msa0793090:CDS |
| GTGTCCATCGTCGCCGACGC+AGG | 0.509894 | 5_3:+5100964 | Msa0793090:CDS |
| TTTGTTGAAGTGACTTCTCG+TGG | 0.510774 | 5_3:+5098236 | Msa0793090:CDS |
| GGAGAAGCTCCACACTCTCA+TGG | 0.512213 | 5_3:+5097971 | Msa0793090:CDS |
| AAGAAATGTTAGCTAGGGAA+TGG | 0.514183 | 5_3:+5101788 | Msa0793090:three_prime_UTR |
| AAGCTAAGTATGAAGAGCTT+GGG | 0.516105 | 5_3:-5097948 | None:intergenic |
| CGGTCCTTCCCTCGGTGAAG+AGG | 0.519858 | 5_3:-5101083 | None:intergenic |
| GCATCTTTGGAGCAGGAGCT+GGG | 0.522935 | 5_3:-5098912 | None:intergenic |
| CGAGAGATTAGTAGGACCAT+TGG | 0.525975 | 5_3:+5101104 | Msa0793090:CDS |
| TGGTGAATATCCTTCACCTA+TGG | 0.528306 | 5_3:+5097899 | Msa0793090:CDS |
| TTGCAGGATTCCTGTTATTG+GGG | 0.528895 | 5_3:+5098187 | Msa0793090:intron |
| TGAATATATTAAGTTGTGAA+TGG | 0.532675 | 5_3:+5097818 | Msa0793090:exon |
| TAATCTCTCGGTCCTTCCCT+CGG | 0.534837 | 5_3:-5101091 | None:intergenic |
| GAAAACTGCATCTTTGGAGC+AGG | 0.538241 | 5_3:-5098919 | None:intergenic |
| CTCAAAGCTGTCTCTTTCAT+GGG | 0.539064 | 5_3:-5097873 | None:intergenic |
| TCTTCCTGCGTCGGCGACGA+TGG | 0.540297 | 5_3:-5100968 | None:intergenic |
| TTGAAGTGACTTCTCGTGGA+GGG | 0.541093 | 5_3:+5098240 | Msa0793090:CDS |
| CCGTCTGAACTACTCTGCTC+CGG | 0.545473 | 5_3:-5101652 | None:intergenic |
| GATCATTCTTCAACTTCTCA+CGG | 0.547465 | 5_3:-5101540 | None:intergenic |
| CAATGGTCCTACTAATCTCT+CGG | 0.547885 | 5_3:-5101103 | None:intergenic |
| GTTAATTCTGCTCCGCCTGA+AGG | 0.550930 | 5_3:+5098988 | Msa0793090:CDS |
| GTAGGACCATTGGTGAACTC+TGG | 0.551646 | 5_3:+5101114 | Msa0793090:CDS |
| CACCCAAAACCAAACAGAAG+TGG | 0.557660 | 5_3:+5101020 | Msa0793090:CDS |
| AGGTTGTCGGGGTCATTGAT+GGG | 0.564891 | 5_3:+5100799 | Msa0793090:CDS |
| TCATATGTTGCCATAGGTGA+AGG | 0.568033 | 5_3:-5097909 | None:intergenic |
| TCTCTGATTTCTTCCTGCGT+CGG | 0.568830 | 5_3:-5100977 | None:intergenic |
| GGCAGACTCTCTTCAAACTC+CGG | 0.569431 | 5_3:+5101633 | Msa0793090:CDS |
| GAGAAGCTCCACACTCTCAT+GGG | 0.571795 | 5_3:+5097972 | Msa0793090:CDS |
| TCTTTGCAGAACAGCATCCA+AGG | 0.571889 | 5_3:+5101054 | Msa0793090:CDS |
| GCAATGGGATCATCTTCGGC+AGG | 0.580770 | 5_3:+5100771 | Msa0793090:intron |
| TCAGGAAATCGCTGTTGAAG+TGG | 0.581487 | 5_3:-5101583 | None:intergenic |
| AAAGAGACAGCTTTGAGCCA+TGG | 0.588397 | 5_3:+5097879 | Msa0793090:CDS |
| GGCTAAAACCTCTTCACCGA+GGG | 0.597780 | 5_3:+5101075 | Msa0793090:CDS |
| TGTTAGCAGGAACACTATGG+TGG | 0.605828 | 5_3:-5100920 | None:intergenic |
| ATTGTCAAAACTCAAATCAA+CGG | 0.606958 | 5_3:+5102082 | Msa0793090:three_prime_UTR |
| AAGACAGCTGGTTGAACTTG+TGG | 0.608568 | 5_3:-5098952 | None:intergenic |
| CCGGAGCAGAGTAGTTCAGA+CGG | 0.612929 | 5_3:+5101652 | Msa0793090:CDS |
| CTATGAAGATGATAAGGCGA+AGG | 0.615408 | 5_3:+5101684 | Msa0793090:CDS |
| TTATCAAGATAAAGCCGTGA+AGG | 0.616173 | 5_3:+5101483 | Msa0793090:CDS |
| GCTGAGACTTTGAGTTGCAG+TGG | 0.618681 | 5_3:+5101856 | Msa0793090:three_prime_UTR |
| CTTGTTCCAGAGTTCACCAA+TGG | 0.619707 | 5_3:-5101120 | None:intergenic |
| ACCTCCTCATATGTTGCCAT+AGG | 0.625420 | 5_3:-5097915 | None:intergenic |
| AAAACCTCTTCACCGAGGGA+AGG | 0.626858 | 5_3:+5101079 | Msa0793090:CDS |
| ACCTATGGCAACATATGAGG+AGG | 0.630539 | 5_3:+5097914 | Msa0793090:CDS |
| AACAACGTGACCGCCTCTGT+CGG | 0.631474 | 5_3:+5100942 | Msa0793090:CDS |
| GTTGAAGTGACTTCTCGTGG+AGG | 0.634997 | 5_3:+5098239 | Msa0793090:CDS |
| GGCAGGATCTCAGGTTGTCG+GGG | 0.638448 | 5_3:+5100788 | Msa0793090:CDS |
| TGCAGGATTCCTGTTATTGG+GGG | 0.639336 | 5_3:+5098188 | Msa0793090:intron |
| AAGCCGTGAAGGACAAAGAG+AGG | 0.641251 | 5_3:+5101494 | Msa0793090:CDS |
| ATTGGTTCGGAGAAACTCAA+AGG | 0.644223 | 5_3:+5100855 | Msa0793090:CDS |
| GCGACGATGGACACCGACAG+AGG | 0.659779 | 5_3:-5100955 | None:intergenic |
| TACTGACATGTTGAATGCTG+AGG | 0.661079 | 5_3:+5101612 | Msa0793090:CDS |
| GAGAAGTCACTTCAACAAAG+AGG | 0.662036 | 5_3:-5098232 | None:intergenic |
| ACTTGGTGCCCATGAGAGTG+TGG | 0.664789 | 5_3:-5097980 | None:intergenic |
| ACGATGGACACCGACAGAGG+CGG | 0.677611 | 5_3:-5100952 | None:intergenic |
| GCAAAGCAAAGACCTTCAGG+CGG | 0.704080 | 5_3:-5099000 | None:intergenic |
| ACAAATCACAGTGATCAACT+GGG | 0.709759 | 5_3:+5101894 | Msa0793090:three_prime_UTR |
| GACCATTTAGAGATCAGACG+CGG | 0.710134 | 5_3:-5102015 | None:intergenic |
| TAGGTGAAGGATATTCACCA+TGG | 0.732815 | 5_3:-5097896 | None:intergenic |
| AGGCTAAAACCTCTTCACCG+AGG | 0.737163 | 5_3:+5101074 | Msa0793090:CDS |
| GTTAGCAGGAACACTATGGT+GGG | 0.739497 | 5_3:-5100919 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTAAGAGAAATAA+AGG | - | chr5_3:5096357-5096376 | None:intergenic | 10.0% |
| !!! | CTTTTATTTATTTATTAACA+TGG | + | chr5_3:5096628-5096647 | Msa0793090:intron | 10.0% |
| !!! | CCTATTTGTATATTTTTTAA+CGG | + | chr5_3:5096326-5096345 | Msa0793090:five_prime_UTR | 15.0% |
| !! | TTAGTACTTTATTAAAATAG+TGG | + | chr5_3:5096393-5096412 | Msa0793090:intron | 15.0% |
| !! | TTAATAATAATAAAGTAAGC+AGG | - | chr5_3:5096492-5096511 | None:intergenic | 15.0% |
| !! | TACTTTCAACAAAAAAAAAA+AGG | + | chr5_3:5096714-5096733 | Msa0793090:intron | 15.0% |
| !!! | ATAAATAAATTAGTCTACTT+TGG | - | chr5_3:5096888-5096907 | None:intergenic | 15.0% |
| !! | TAGACTAATTTATTTATTGT+AGG | + | chr5_3:5096891-5096910 | Msa0793090:intron | 15.0% |
| !! | AAAAACATTAATGAGAATAA+TGG | - | chr5_3:5097635-5097654 | None:intergenic | 15.0% |
| !!! | TTTACTTTTATTTTAAGATG+TGG | + | chr5_3:5098054-5098073 | Msa0793090:intron | 15.0% |
| !!! | GATTATAATTTCAATTTTGT+TGG | + | chr5_3:5098281-5098300 | Msa0793090:intron | 15.0% |
| !!! | AATAATAGATTTGTTCATAA+TGG | - | chr5_3:5098751-5098770 | None:intergenic | 15.0% |
| !!! | TTAGTAGTTAATCTTATTTT+GGG | - | chr5_3:5099035-5099054 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTGAGAATATTTT+AGG | + | chr5_3:5099082-5099101 | Msa0793090:intron | 15.0% |
| !! | AAAAAAACATACAAAAGATT+AGG | - | chr5_3:5100658-5100677 | None:intergenic | 15.0% |
| !! | ATAAACAATACTAGTTATTA+TGG | - | chr5_3:5100736-5100755 | None:intergenic | 15.0% |
| !! | CCGTTAAAAAATATACAAAT+AGG | - | chr5_3:5096329-5096348 | None:intergenic | 20.0% |
| !! | TAAAAGATAAAAATAACGTG+TGG | - | chr5_3:5096614-5096633 | None:intergenic | 20.0% |
| !! | ACATTATCATGTGTTAATTT+AGG | - | chr5_3:5096658-5096677 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAGGTCAAGTTTT+TGG | + | chr5_3:5096726-5096745 | Msa0793090:intron | 20.0% |
| !!! | AAATTTATTTTGGTAAGCAT+AGG | + | chr5_3:5097110-5097129 | Msa0793090:intron | 20.0% |
| !! | AACAAAACAGAAAAGAAAAA+AGG | - | chr5_3:5097482-5097501 | None:intergenic | 20.0% |
| !! | AAAAGGTAAAACAAACAAAA+AGG | - | chr5_3:5097763-5097782 | None:intergenic | 20.0% |
| !!! | TGAATATATTAAGTTGTGAA+TGG | + | chr5_3:5097818-5097837 | Msa0793090:exon | 20.0% |
| !! | TTGCAATTACAAAAAACATT+TGG | + | chr5_3:5098157-5098176 | Msa0793090:intron | 20.0% |
| !!! | ATTCTTTTGAATCATAACTT+TGG | + | chr5_3:5098557-5098576 | Msa0793090:intron | 20.0% |
| !! | AGATCATTAAAGATAGAAAA+TGG | + | chr5_3:5098639-5098658 | Msa0793090:intron | 20.0% |
| !! | TTCCAATTTATACATTAGAA+GGG | - | chr5_3:5098852-5098871 | None:intergenic | 20.0% |
| !! | TTTCCAATTTATACATTAGA+AGG | - | chr5_3:5098853-5098872 | None:intergenic | 20.0% |
| !! | ATAAATTGGAAATTTCACTA+TGG | + | chr5_3:5098861-5098880 | Msa0793090:intron | 20.0% |
| !!! | GTTAGTAGTTAATCTTATTT+TGG | - | chr5_3:5099036-5099055 | None:intergenic | 20.0% |
| !! | TTAGGTTATGTTTAAATTGA+TGG | + | chr5_3:5099100-5099119 | Msa0793090:intron | 20.0% |
| !! | TTATGTTTAAATTGATGGAA+AGG | + | chr5_3:5099105-5099124 | Msa0793090:intron | 20.0% |
| !! | TATGTTTAAATTGATGGAAA+GGG | + | chr5_3:5099106-5099125 | Msa0793090:intron | 20.0% |
| !! | TCATTATTTGAGAATTGAAA+TGG | - | chr5_3:5099487-5099506 | None:intergenic | 20.0% |
| !! | TCAATTCTCAAATAATGAAA+TGG | + | chr5_3:5099489-5099508 | Msa0793090:intron | 20.0% |
| !!! | TAGTTTTCAATCTAGATATA+TGG | + | chr5_3:5099613-5099632 | Msa0793090:intron | 20.0% |
| !! | TATTATGAGCTTACATTTAA+TGG | + | chr5_3:5099880-5099899 | Msa0793090:intron | 20.0% |
| !! | ATTATGAGCTTACATTTAAT+GGG | + | chr5_3:5099881-5099900 | Msa0793090:intron | 20.0% |
| !! | CAATCCTATATTAAGTTTAA+AGG | - | chr5_3:5100516-5100535 | None:intergenic | 20.0% |
| ! | TAATAATAAAGTAAGCAGGA+AGG | - | chr5_3:5096488-5096507 | None:intergenic | 25.0% |
| !! | TAAATTAGTCTACTTTGGTA+TGG | - | chr5_3:5096883-5096902 | None:intergenic | 25.0% |
| ! | TTGGTCATAATCATATCATA+TGG | + | chr5_3:5097043-5097062 | Msa0793090:intron | 25.0% |
| ! | GGATTCATTGATCTTTAAAT+CGG | + | chr5_3:5097064-5097083 | Msa0793090:intron | 25.0% |
| ! | ATTACCATAGCGTAAATAAA+AGG | + | chr5_3:5097197-5097216 | Msa0793090:intron | 25.0% |
| ! | TTACCATAGCGTAAATAAAA+GGG | + | chr5_3:5097198-5097217 | Msa0793090:intron | 25.0% |
| !!! | GTTTTGTTTTGTTTTCTTCA+AGG | + | chr5_3:5097494-5097513 | Msa0793090:intron | 25.0% |
| !! | AAGAAACAGACAAGTTTTTA+AGG | - | chr5_3:5097561-5097580 | None:intergenic | 25.0% |
| ! | AACAAACAAAAAGGAGAAAT+AGG | - | chr5_3:5097754-5097773 | None:intergenic | 25.0% |
| !! | GTTTTACCTTTTCTTGTTAA+TGG | + | chr5_3:5097771-5097790 | Msa0793090:intron | 25.0% |
| ! | ATTCGTAGTTTATAAATCCA+GGG | - | chr5_3:5098017-5098036 | None:intergenic | 25.0% |
| ! | AATTCGTAGTTTATAAATCC+AGG | - | chr5_3:5098018-5098037 | None:intergenic | 25.0% |
| ! | TGCAAAGTTATACAAGTAAA+TGG | - | chr5_3:5098142-5098161 | None:intergenic | 25.0% |
| !!! | AACATTTGGAATTTTATTGC+AGG | + | chr5_3:5098171-5098190 | Msa0793090:intron | 25.0% |
| !! | ACTGATAATGTCCAAAATAT+AGG | + | chr5_3:5098351-5098370 | Msa0793090:intron | 25.0% |
| !! | AGTTTTCAATTTTCCATCAA+CGG | + | chr5_3:5098676-5098695 | Msa0793090:CDS | 25.0% |
| ! | TCCAATTTATACATTAGAAG+GGG | - | chr5_3:5098851-5098870 | None:intergenic | 25.0% |
| !! | TTCAATTTCCTTTTTCTTAG+TGG | - | chr5_3:5099058-5099077 | None:intergenic | 25.0% |
| ! | ATGTTTAAATTGATGGAAAG+GGG | + | chr5_3:5099107-5099126 | Msa0793090:intron | 25.0% |
| ! | TCAAATTTCACTACTCTATA+GGG | - | chr5_3:5099337-5099356 | None:intergenic | 25.0% |
| ! | TTCAAATTTCACTACTCTAT+AGG | - | chr5_3:5099338-5099357 | None:intergenic | 25.0% |
| !! | TGCTATTTAGTACAAAATAG+CGG | + | chr5_3:5099381-5099400 | Msa0793090:intron | 25.0% |
| !! | TAAGTCAATTTTATCAATGG+AGG | - | chr5_3:5099460-5099479 | None:intergenic | 25.0% |
| !! | AGGTAAGTCAATTTTATCAA+TGG | - | chr5_3:5099463-5099482 | None:intergenic | 25.0% |
| ! | TATTTGAGAATTGAAATGGT+AGG | - | chr5_3:5099483-5099502 | None:intergenic | 25.0% |
| ! | ATTGTTTGATTGTTTCATTG+AGG | - | chr5_3:5099525-5099544 | None:intergenic | 25.0% |
| ! | TCAATGAAACAATCAAACAA+TGG | + | chr5_3:5099524-5099543 | Msa0793090:intron | 25.0% |
| ! | AAACAATCAAACAATGGAAT+AGG | + | chr5_3:5099530-5099549 | Msa0793090:intron | 25.0% |
| ! | AACAATCAAACAATGGAATA+GGG | + | chr5_3:5099531-5099550 | Msa0793090:intron | 25.0% |
| ! | CTATTTAACGATTAGAGAAA+TGG | - | chr5_3:5099596-5099615 | None:intergenic | 25.0% |
| ! | TAATATAGTATCTTTCTCCT+AGG | + | chr5_3:5099653-5099672 | Msa0793090:intron | 25.0% |
| !! | ATGATTTTCCATGACTTAAT+CGG | + | chr5_3:5099677-5099696 | Msa0793090:intron | 25.0% |
| !! | TGATGGTCTTTTAAATCTAT+TGG | + | chr5_3:5099714-5099733 | Msa0793090:intron | 25.0% |
| !!! | TGCCTTATTTTATCATCAAA+AGG | + | chr5_3:5099830-5099849 | Msa0793090:intron | 25.0% |
| !!! | GTCCTTTTGATGATAAAATA+AGG | - | chr5_3:5099835-5099854 | None:intergenic | 25.0% |
| !!! | TAGGTAAATGTTAGTTTTCA+AGG | + | chr5_3:5099993-5100012 | Msa0793090:intron | 25.0% |
| !!! | AAGGAAGTTTTGTTTTCATT+TGG | - | chr5_3:5100132-5100151 | None:intergenic | 25.0% |
| !! | TGTAAGATTTGTGCTATTAT+AGG | - | chr5_3:5100244-5100263 | None:intergenic | 25.0% |
| !!! | ACATTTTAAGTTTAGTATCG+TGG | + | chr5_3:5100261-5100280 | Msa0793090:intron | 25.0% |
| !!! | AAAAGTACTAGAGTGAAAAT+TGG | + | chr5_3:5100334-5100353 | Msa0793090:intron | 25.0% |
| !! | AAAGTACTAGAGTGAAAATT+GGG | + | chr5_3:5100335-5100354 | Msa0793090:intron | 25.0% |
| ! | ACATTTATCACTAAATCTCT+CGG | - | chr5_3:5100489-5100508 | None:intergenic | 25.0% |
| ! | TCCACCTTTAAACTTAATAT+AGG | + | chr5_3:5100509-5100528 | Msa0793090:intron | 25.0% |
| ! | TCCTATATTAAGTTTAAAGG+TGG | - | chr5_3:5100513-5100532 | None:intergenic | 25.0% |
| ! | AATAGAAAGAATGGTTAACA+GGG | - | chr5_3:5100623-5100642 | None:intergenic | 25.0% |
| ! | AAATAGAAAGAATGGTTAAC+AGG | - | chr5_3:5100624-5100643 | None:intergenic | 25.0% |
| !! | GTTAACCATTCTTTCTATTT+TGG | + | chr5_3:5100624-5100643 | Msa0793090:intron | 25.0% |
| !!! | ATTCTTTCTATTTTGGAAGT+GGG | + | chr5_3:5100631-5100650 | Msa0793090:intron | 25.0% |
| ! | ATAACAGTAAGAGAAGTTAT+AGG | - | chr5_3:5100708-5100727 | None:intergenic | 25.0% |
| !! | TTAACACATCTTTTATGAGT+TGG | + | chr5_3:5101177-5101196 | Msa0793090:intron | 25.0% |
| ! | TAAGTAATCTCTAATCTATC+TGG | + | chr5_3:5101283-5101302 | Msa0793090:intron | 25.0% |
| !!! | TCTAATTTTTAAAGCTTCTG+GGG | - | chr5_3:5101324-5101343 | None:intergenic | 25.0% |
| !!! | CTCTAATTTTTAAAGCTTCT+GGG | - | chr5_3:5101325-5101344 | None:intergenic | 25.0% |
| !!! | TCTCTAATTTTTAAAGCTTC+TGG | - | chr5_3:5101326-5101345 | None:intergenic | 25.0% |
| ! | TCTTGATAAACCTTAAATGT+TGG | - | chr5_3:5101472-5101491 | None:intergenic | 25.0% |
| ! | ATTGTCAAAACTCAAATCAA+CGG | + | chr5_3:5102082-5102101 | Msa0793090:three_prime_UTR | 25.0% |
| ATAAAAATAACGTGTGGTGT+GGG | - | chr5_3:5096608-5096627 | None:intergenic | 30.0% | |
| TGACCTCTTTGTATTGTAAA+TGG | + | chr5_3:5097011-5097030 | Msa0793090:intron | 30.0% | |
| TGTCCATTTACAATACAAAG+AGG | - | chr5_3:5097017-5097036 | None:intergenic | 30.0% | |
| TTGTAAATGGACAATGAGAT+TGG | + | chr5_3:5097024-5097043 | Msa0793090:intron | 30.0% | |
| !!! | TTATTTTGGTAAGCATAGGT+AGG | + | chr5_3:5097114-5097133 | Msa0793090:intron | 30.0% |
| TAACTAGCAGTAAGAAGAAA+GGG | - | chr5_3:5097386-5097405 | None:intergenic | 30.0% | |
| ATAACTAGCAGTAAGAAGAA+AGG | - | chr5_3:5097387-5097406 | None:intergenic | 30.0% | |
| !! | TGCTGATTCATTCATTTCAT+TGG | + | chr5_3:5097454-5097473 | Msa0793090:intron | 30.0% |
| !! | TTTTTGTTGTCTGCATGTAT+AGG | + | chr5_3:5097606-5097625 | Msa0793090:intron | 30.0% |
| ! | TTTTCCCTATCTACAAATAC+TGG | + | chr5_3:5097656-5097675 | Msa0793090:intron | 30.0% |
| ! | TTACCTTTTCTTGTTAATGG+TGG | + | chr5_3:5097774-5097793 | Msa0793090:intron | 30.0% |
| ACGAATTAGATATTGTGACT+TGG | + | chr5_3:5098031-5098050 | Msa0793090:intron | 30.0% | |
| ! | ATTTTGTTGGTATGAATGCA+TGG | + | chr5_3:5098294-5098313 | Msa0793090:intron | 30.0% |
| CTACATATTCACACAATGTT+TGG | - | chr5_3:5098329-5098348 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTTTCCTACATGTT+TGG | + | chr5_3:5098575-5098594 | Msa0793090:intron | 30.0% |
| !!! | ATTATTTTAAAGCTCGCAAC+TGG | + | chr5_3:5098765-5098784 | Msa0793090:CDS | 30.0% |
| ACTACTAACCACTAAGAAAA+AGG | + | chr5_3:5099047-5099066 | Msa0793090:intron | 30.0% | |
| ! | TTGTTTGGATTGTCTGAAAT+AGG | + | chr5_3:5099141-5099160 | Msa0793090:intron | 30.0% |
| GGTTAAAAACTATAGAGATG+TGG | - | chr5_3:5099204-5099223 | None:intergenic | 30.0% | |
| ! | CTCTATAGTTTTTAACCTGT+CGG | + | chr5_3:5099207-5099226 | Msa0793090:intron | 30.0% |
| ! | TCTATAGTTTTTAACCTGTC+GGG | + | chr5_3:5099208-5099227 | Msa0793090:intron | 30.0% |
| TAATTAACAACAGTAGGGTA+GGG | - | chr5_3:5099293-5099312 | None:intergenic | 30.0% | |
| TTGTTAATTAGTGGCTACAT+CGG | + | chr5_3:5099303-5099322 | Msa0793090:intron | 30.0% | |
| TTAGAGAAATGGAATCAGAA+AGG | - | chr5_3:5099585-5099604 | None:intergenic | 30.0% | |
| TGTATATTCCGATTAAGTCA+TGG | - | chr5_3:5099688-5099707 | None:intergenic | 30.0% | |
| ! | CGGAATATACATGATTTTGA+TGG | + | chr5_3:5099697-5099716 | Msa0793090:intron | 30.0% |
| CATTAAGATGAATGAGTTGT+CGG | + | chr5_3:5100292-5100311 | Msa0793090:intron | 30.0% | |
| AAGTACTAGAGTGAAAATTG+GGG | + | chr5_3:5100336-5100355 | Msa0793090:intron | 30.0% | |
| TAAAGGATATTCCAATAGTC+AGG | + | chr5_3:5100438-5100457 | Msa0793090:intron | 30.0% | |
| AAAGGATATTCCAATAGTCA+GGG | + | chr5_3:5100439-5100458 | Msa0793090:intron | 30.0% | |
| GTATAGGGTTTGATATATGT+TGG | + | chr5_3:5100581-5100600 | Msa0793090:intron | 30.0% | |
| CACTTCCAAAATAGAAAGAA+TGG | - | chr5_3:5100632-5100651 | None:intergenic | 30.0% | |
| !! | CATTCTTTCTATTTTGGAAG+TGG | + | chr5_3:5100630-5100649 | Msa0793090:intron | 30.0% |
| ATTGATGGGAAATTTGATAG+TGG | + | chr5_3:5100813-5100832 | Msa0793090:CDS | 30.0% | |
| TATCTAGTTACTGTCACAAT+TGG | + | chr5_3:5100837-5100856 | Msa0793090:CDS | 30.0% | |
| AAATTGTATCCACTTCTGTT+TGG | - | chr5_3:5101032-5101051 | None:intergenic | 30.0% | |
| CAATAGTTCTTAGACCAAAT+AGG | - | chr5_3:5101255-5101274 | None:intergenic | 30.0% | |
| !!! | CTAATTTTTAAAGCTTCTGG+GGG | - | chr5_3:5101323-5101342 | None:intergenic | 30.0% |
| AAATTAGAGAATGATAGCTC+AGG | + | chr5_3:5101336-5101355 | Msa0793090:intron | 30.0% | |
| AATTAGAGAATGATAGCTCA+GGG | + | chr5_3:5101337-5101356 | Msa0793090:intron | 30.0% | |
| AAGCTCAGATATGCATTATT+TGG | + | chr5_3:5101405-5101424 | Msa0793090:intron | 30.0% | |
| ! | TTAAGTTGCACCAACATTTA+AGG | + | chr5_3:5101459-5101478 | Msa0793090:intron | 30.0% |
| TGATGACTATGAAGATGATA+AGG | + | chr5_3:5101678-5101697 | Msa0793090:CDS | 30.0% | |
| AGAAAGAAGAAATGTTAGCT+AGG | + | chr5_3:5101782-5101801 | Msa0793090:three_prime_UTR | 30.0% | |
| GAAAGAAGAAATGTTAGCTA+GGG | + | chr5_3:5101783-5101802 | Msa0793090:three_prime_UTR | 30.0% | |
| !! | GCATTTTAGTATTCAGTTTG+AGG | + | chr5_3:5101922-5101941 | Msa0793090:three_prime_UTR | 30.0% |
| GATAAAAATAACGTGTGGTG+TGG | - | chr5_3:5096609-5096628 | None:intergenic | 35.0% | |
| CAATGCAGGTCAATAATGAA+AGG | - | chr5_3:5096684-5096703 | None:intergenic | 35.0% | |
| CTTTCATTATTGACCTGCAT+TGG | + | chr5_3:5096682-5096701 | Msa0793090:intron | 35.0% | |
| AGTAAATTCATGTCCAATGC+AGG | - | chr5_3:5096698-5096717 | None:intergenic | 35.0% | |
| ! | AGGGTAAAAAGGATTTTGTG+GGG | - | chr5_3:5096776-5096795 | None:intergenic | 35.0% |
| ! | CAGGGTAAAAAGGATTTTGT+GGG | - | chr5_3:5096777-5096796 | None:intergenic | 35.0% |
| ! | TCAGGGTAAAAAGGATTTTG+TGG | - | chr5_3:5096778-5096797 | None:intergenic | 35.0% |
| TCTAATCTGACACTGTTTCA+GGG | - | chr5_3:5096795-5096814 | None:intergenic | 35.0% | |
| ATCTAATCTGACACTGTTTC+AGG | - | chr5_3:5096796-5096815 | None:intergenic | 35.0% | |
| TTGTAGGTGCATAGTAGTAT+AGG | + | chr5_3:5096907-5096926 | Msa0793090:intron | 35.0% | |
| TAGTATAGGTCTAAACCACA+TGG | + | chr5_3:5096921-5096940 | Msa0793090:intron | 35.0% | |
| ACACATAGATACAATCCATG+TGG | - | chr5_3:5096939-5096958 | None:intergenic | 35.0% | |
| ! | ACATGGATTGTATCTATGTG+TGG | + | chr5_3:5096938-5096957 | Msa0793090:intron | 35.0% |
| TTACAATACAAAGAGGTCAC+AGG | - | chr5_3:5097010-5097029 | None:intergenic | 35.0% | |
| !! | AGACCCTTTTATTTACGCTA+TGG | - | chr5_3:5097204-5097223 | None:intergenic | 35.0% |
| ! | ACCTTTTCTGTACCTTTTCT+TGG | + | chr5_3:5097339-5097358 | Msa0793090:intron | 35.0% |
| ! | CCTTTTCTGTACCTTTTCTT+GGG | + | chr5_3:5097340-5097359 | Msa0793090:intron | 35.0% |
| ATGATACATAGCCCAAGAAA+AGG | - | chr5_3:5097354-5097373 | None:intergenic | 35.0% | |
| CCATCCAGTATTTGTAGATA+GGG | - | chr5_3:5097663-5097682 | None:intergenic | 35.0% | |
| ACCATCCAGTATTTGTAGAT+AGG | - | chr5_3:5097664-5097683 | None:intergenic | 35.0% | |
| AAGCTAAGTATGAAGAGCTT+GGG | - | chr5_3:5097951-5097970 | None:intergenic | 35.0% | |
| TATTGCAGGATTCCTGTTAT+TGG | + | chr5_3:5098185-5098204 | Msa0793090:intron | 35.0% | |
| ATTGCAGGATTCCTGTTATT+GGG | + | chr5_3:5098186-5098205 | Msa0793090:intron | 35.0% | |
| ATCACTACAACCAAACATGT+AGG | - | chr5_3:5098588-5098607 | None:intergenic | 35.0% | |
| AGTGATACAGTTACCTTATC+TGG | + | chr5_3:5098602-5098621 | Msa0793090:intron | 35.0% | |
| CAAGACAGATTAACCAGATA+AGG | - | chr5_3:5098618-5098637 | None:intergenic | 35.0% | |
| TGTAGTTCCAATGAACATAC+CGG | - | chr5_3:5098804-5098823 | None:intergenic | 35.0% | |
| !! | TTGCTGTTTGTACTAATGTC+AGG | + | chr5_3:5098824-5098843 | Msa0793090:intron | 35.0% |
| ! | TGCTGTTTGTACTAATGTCA+GGG | + | chr5_3:5098825-5098844 | Msa0793090:intron | 35.0% |
| GCCCCTTCTAATGTATAAAT+TGG | + | chr5_3:5098847-5098866 | Msa0793090:intron | 35.0% | |
| GTATGTGAAAACTGCATCTT+TGG | - | chr5_3:5098928-5098947 | None:intergenic | 35.0% | |
| TTTAACTGTTGAAAGACAGC+TGG | - | chr5_3:5098967-5098986 | None:intergenic | 35.0% | |
| ! | ATTGTCTGAAATAGGATGTG+AGG | + | chr5_3:5099149-5099168 | Msa0793090:intron | 35.0% |
| AAACTATAGAGATGTGGTGA+TGG | - | chr5_3:5099198-5099217 | None:intergenic | 35.0% | |
| ! | TTTTTAACCTGTCGGGATAT+TGG | + | chr5_3:5099215-5099234 | Msa0793090:intron | 35.0% |
| ! | TTTTAACCTGTCGGGATATT+GGG | + | chr5_3:5099216-5099235 | Msa0793090:intron | 35.0% |
| AATTAACAACAGTAGGGTAG+GGG | - | chr5_3:5099292-5099311 | None:intergenic | 35.0% | |
| CTAATTAACAACAGTAGGGT+AGG | - | chr5_3:5099294-5099313 | None:intergenic | 35.0% | |
| ACCCTACTGTTGTTAATTAG+TGG | + | chr5_3:5099294-5099313 | Msa0793090:intron | 35.0% | |
| GCCACTAATTAACAACAGTA+GGG | - | chr5_3:5099298-5099317 | None:intergenic | 35.0% | |
| AGCCACTAATTAACAACAGT+AGG | - | chr5_3:5099299-5099318 | None:intergenic | 35.0% | |
| TGGAGGATCAAGAAAAATAG+CGG | - | chr5_3:5099443-5099462 | None:intergenic | 35.0% | |
| GATTGTTTCATTGAGGAACT+AGG | - | chr5_3:5099518-5099537 | None:intergenic | 35.0% | |
| AGTCATGGAAAATCATTCCT+AGG | - | chr5_3:5099673-5099692 | None:intergenic | 35.0% | |
| ! | ACATAATTTGTCATCGTGCA+CGG | - | chr5_3:5099807-5099826 | None:intergenic | 35.0% |
| ATGAGCTTACATTTAATGGG+TGG | + | chr5_3:5099884-5099903 | Msa0793090:intron | 35.0% | |
| ! | TGAGCTTACATTTAATGGGT+GGG | + | chr5_3:5099885-5099904 | Msa0793090:intron | 35.0% |
| TATTGAAAAACCATCTCCCT+CGG | - | chr5_3:5099975-5099994 | None:intergenic | 35.0% | |
| !! | TTAGTTTTCAAGGTTTGCTC+AGG | + | chr5_3:5100003-5100022 | Msa0793090:intron | 35.0% |
| TTGTAAGACGTCACAATGTT+TGG | + | chr5_3:5100029-5100048 | Msa0793090:intron | 35.0% | |
| AGCAAGAAACTCACAGATTA+TGG | + | chr5_3:5100196-5100215 | Msa0793090:intron | 35.0% | |
| ! | TTGTGCTATTATAGGATCAC+AGG | - | chr5_3:5100236-5100255 | None:intergenic | 35.0% |
| TTGTCGGACAATATAGTACT+AGG | + | chr5_3:5100308-5100327 | Msa0793090:intron | 35.0% | |
| TCGTTACTAGTACTTACACA+TGG | - | chr5_3:5100406-5100425 | None:intergenic | 35.0% | |
| AACGAGAGTTGACTAGATAA+AGG | + | chr5_3:5100421-5100440 | Msa0793090:intron | 35.0% | |
| TAAATCTCTCGGTACTAGTT+TGG | - | chr5_3:5100478-5100497 | None:intergenic | 35.0% | |
| ATATCAAACCCTATACCACT+AGG | - | chr5_3:5100577-5100596 | None:intergenic | 35.0% | |
| AGTTACTGTCACAATTGGTT+CGG | + | chr5_3:5100842-5100861 | Msa0793090:CDS | 35.0% | |
| !!! | ATCCACTTCTGTTTGGTTTT+GGG | - | chr5_3:5101025-5101044 | None:intergenic | 35.0% |
| !! | TATCCACTTCTGTTTGGTTT+TGG | - | chr5_3:5101026-5101045 | None:intergenic | 35.0% |
| !!! | CTTACTGCTTTTTCTGATTC+AGG | - | chr5_3:5101149-5101168 | None:intergenic | 35.0% |
| CTGAATCAGAAAAAGCAGTA+AGG | + | chr5_3:5101147-5101166 | Msa0793090:intron | 35.0% | |
| TAGCTCAGGGATTAAATTAC+AGG | + | chr5_3:5101350-5101369 | Msa0793090:intron | 35.0% | |
| TTATCAAGATAAAGCCGTGA+AGG | + | chr5_3:5101483-5101502 | Msa0793090:CDS | 35.0% | |
| ! | AGAGAGGTACATAACAGAAA+TGG | + | chr5_3:5101510-5101529 | Msa0793090:CDS | 35.0% |
| GATCATTCTTCAACTTCTCA+CGG | - | chr5_3:5101543-5101562 | None:intergenic | 35.0% | |
| !! | GAAGGAGAAAGATTTTAGTG+TGG | + | chr5_3:5101702-5101721 | Msa0793090:CDS | 35.0% |
| AAGAAATGTTAGCTAGGGAA+TGG | + | chr5_3:5101788-5101807 | Msa0793090:three_prime_UTR | 35.0% | |
| ! | CTGTGATTTGTGCTTAAAGT+AGG | - | chr5_3:5101885-5101904 | None:intergenic | 35.0% |
| ACAAATCACAGTGATCAACT+GGG | + | chr5_3:5101894-5101913 | Msa0793090:three_prime_UTR | 35.0% | |
| !! | TCAGTTTGAGGTGTTTGTTT+TGG | + | chr5_3:5101934-5101953 | Msa0793090:three_prime_UTR | 35.0% |
| GCTGAATATATGATCCTAAC+AGG | + | chr5_3:5101976-5101995 | Msa0793090:three_prime_UTR | 35.0% | |
| GGAGTGAGTATATGGGAAAA+AGG | - | chr5_3:5096467-5096486 | None:intergenic | 40.0% | |
| GACACTGTTTCAGGGTAAAA+AGG | - | chr5_3:5096787-5096806 | None:intergenic | 40.0% | |
| TGTGAACAGTGTCTTGGATT+AGG | + | chr5_3:5097139-5097158 | Msa0793090:intron | 40.0% | |
| GTGAACAGTGTCTTGGATTA+GGG | + | chr5_3:5097140-5097159 | Msa0793090:intron | 40.0% | |
| GATTAGGGAGAGACTAGAAA+AGG | + | chr5_3:5097155-5097174 | Msa0793090:intron | 40.0% | |
| GAGACTAGAAAAGGACTTTG+TGG | + | chr5_3:5097164-5097183 | Msa0793090:intron | 40.0% | |
| ! | TCAAAACCTCTGAGCTTTGA+TGG | + | chr5_3:5097265-5097284 | Msa0793090:intron | 40.0% |
| ! | CAAAACCTCTGAGCTTTGAT+GGG | + | chr5_3:5097266-5097285 | Msa0793090:intron | 40.0% |
| ! | CCCAAGAAAAGGTACAGAAA+AGG | - | chr5_3:5097343-5097362 | None:intergenic | 40.0% |
| AGAACTGCAACAAGCTTCAA+AGG | - | chr5_3:5097419-5097438 | None:intergenic | 40.0% | |
| CCCTATCTACAAATACTGGA+TGG | + | chr5_3:5097660-5097679 | Msa0793090:intron | 40.0% | |
| TGGCGCAGGAAAAATACTAA+AGG | + | chr5_3:5097794-5097813 | Msa0793090:intron | 40.0% | |
| CTCAAAGCTGTCTCTTTCAT+GGG | - | chr5_3:5097876-5097895 | None:intergenic | 40.0% | |
| TAGGTGAAGGATATTCACCA+TGG | - | chr5_3:5097899-5097918 | None:intergenic | 40.0% | |
| TGGTGAATATCCTTCACCTA+TGG | + | chr5_3:5097899-5097918 | Msa0793090:CDS | 40.0% | |
| TCATATGTTGCCATAGGTGA+AGG | - | chr5_3:5097912-5097931 | None:intergenic | 40.0% | |
| TTCACCTATGGCAACATATG+AGG | + | chr5_3:5097911-5097930 | Msa0793090:CDS | 40.0% | |
| CAAGCTAAGTATGAAGAGCT+TGG | - | chr5_3:5097952-5097971 | None:intergenic | 40.0% | |
| CAAGCTCTTCATACTTAGCT+TGG | + | chr5_3:5097950-5097969 | Msa0793090:CDS | 40.0% | |
| TTGCAGGATTCCTGTTATTG+GGG | + | chr5_3:5098187-5098206 | Msa0793090:intron | 40.0% | |
| GAGAAGTCACTTCAACAAAG+AGG | - | chr5_3:5098235-5098254 | None:intergenic | 40.0% | |
| TTTGTTGAAGTGACTTCTCG+TGG | + | chr5_3:5098236-5098255 | Msa0793090:CDS | 40.0% | |
| ATTCACACAATGTTTGGCGT+CGG | - | chr5_3:5098323-5098342 | None:intergenic | 40.0% | |
| GTCCAAAATATAGGACACTG+AGG | + | chr5_3:5098360-5098379 | Msa0793090:intron | 40.0% | |
| ! | CAAATGCTTCTTTTGTGCTG+CGG | + | chr5_3:5098702-5098721 | Msa0793090:CDS | 40.0% |
| AACTGGACCAATACAACTTC+CGG | + | chr5_3:5098782-5098801 | Msa0793090:CDS | 40.0% | |
| GAACATACCGGAAGTTGTAT+TGG | - | chr5_3:5098792-5098811 | None:intergenic | 40.0% | |
| ACAACTTCCGGTATGTTCAT+TGG | + | chr5_3:5098794-5098813 | Msa0793090:intron | 40.0% | |
| AAAGCAAAGCAAAGACCTTC+AGG | - | chr5_3:5099006-5099025 | None:intergenic | 40.0% | |
| TTTAACCTGTCGGGATATTG+GGG | + | chr5_3:5099217-5099236 | Msa0793090:intron | 40.0% | |
| ATTAACAACAGTAGGGTAGG+GGG | - | chr5_3:5099291-5099310 | None:intergenic | 40.0% | |
| GGAGGATCAAGAAAAATAGC+GGG | - | chr5_3:5099442-5099461 | None:intergenic | 40.0% | |
| ! | GAGCTTACATTTAATGGGTG+GGG | + | chr5_3:5099886-5099905 | Msa0793090:intron | 40.0% |
| CAATCCATTGCAAAATCCGA+GGG | + | chr5_3:5099956-5099975 | Msa0793090:intron | 40.0% | |
| !! | GAGGGAGATGGTTTTTCAAT+AGG | + | chr5_3:5099974-5099993 | Msa0793090:intron | 40.0% |
| AACTTCCTTCTAAGCAGCTT+AGG | + | chr5_3:5100143-5100162 | Msa0793090:intron | 40.0% | |
| TTACACCTAAGCTGCTTAGA+AGG | - | chr5_3:5100151-5100170 | None:intergenic | 40.0% | |
| ! | ACTTTTGTCACCCTGACTAT+TGG | - | chr5_3:5100452-5100471 | None:intergenic | 40.0% |
| !! | ATTGGTTCGGAGAAACTCAA+AGG | + | chr5_3:5100855-5100874 | Msa0793090:CDS | 40.0% |
| TGTTGTTAGCAGGAACACTA+TGG | - | chr5_3:5100926-5100945 | None:intergenic | 40.0% | |
| CAATGGTCCTACTAATCTCT+CGG | - | chr5_3:5101106-5101125 | None:intergenic | 40.0% | |
| AGGTAAGAGCAGGATAGTTT+AGG | - | chr5_3:5101235-5101254 | None:intergenic | 40.0% | |
| CTATCCTGCTCTTACCTATT+TGG | + | chr5_3:5101238-5101257 | Msa0793090:intron | 40.0% | |
| TAGACCAAATAGGTAAGAGC+AGG | - | chr5_3:5101245-5101264 | None:intergenic | 40.0% | |
| AATGCATATCTGAGCTTCTG+CGG | - | chr5_3:5101402-5101421 | None:intergenic | 40.0% | |
| ! | AACATGTCAGTATCTGGTTC+AGG | - | chr5_3:5101604-5101623 | None:intergenic | 40.0% |
| GCATTCAACATGTCAGTATC+TGG | - | chr5_3:5101610-5101629 | None:intergenic | 40.0% | |
| TACTGACATGTTGAATGCTG+AGG | + | chr5_3:5101612-5101631 | Msa0793090:CDS | 40.0% | |
| CTATGAAGATGATAAGGCGA+AGG | + | chr5_3:5101684-5101703 | Msa0793090:CDS | 40.0% | |
| TGTGGATTCATTGCCTGTTA+TGG | + | chr5_3:5101720-5101739 | Msa0793090:CDS | 40.0% | |
| GTGGATTCATTGCCTGTTAT+GGG | + | chr5_3:5101721-5101740 | Msa0793090:CDS | 40.0% | |
| TGTTAGCTAGGGAATGGAAT+AGG | + | chr5_3:5101794-5101813 | Msa0793090:three_prime_UTR | 40.0% | |
| CACAAATCACAGTGATCAAC+TGG | + | chr5_3:5101893-5101912 | Msa0793090:three_prime_UTR | 40.0% | |
| ATCTGTTTCAGCATCCTGTT+AGG | - | chr5_3:5101993-5102012 | None:intergenic | 40.0% | |
| GCAGGAAGGAGTGAGTATAT+GGG | - | chr5_3:5096474-5096493 | None:intergenic | 45.0% | |
| AGCAGGAAGGAGTGAGTATA+TGG | - | chr5_3:5096475-5096494 | None:intergenic | 45.0% | |
| TAGGTCTGTGAACAGTGTCT+TGG | + | chr5_3:5097133-5097152 | Msa0793090:intron | 45.0% | |
| ATGAACCCATCAAAGCTCAG+AGG | - | chr5_3:5097274-5097293 | None:intergenic | 45.0% | |
| GGTTCATGCTGTTACATCCT+CGG | + | chr5_3:5097287-5097306 | Msa0793090:intron | 45.0% | |
| CTGTTACATCCTCGGTAATC+TGG | + | chr5_3:5097295-5097314 | Msa0793090:intron | 45.0% | |
| TTACATCCTCGGTAATCTGG+AGG | + | chr5_3:5097298-5097317 | Msa0793090:intron | 45.0% | |
| TGAATTCCTCCAGATTACCG+AGG | - | chr5_3:5097307-5097326 | None:intergenic | 45.0% | |
| CGGTAATCTGGAGGAATTCA+TGG | + | chr5_3:5097307-5097326 | Msa0793090:intron | 45.0% | |
| TGCAACAAGCTTCAAAGGTC+TGG | - | chr5_3:5097414-5097433 | None:intergenic | 45.0% | |
| GCGCCACCATTAACAAGAAA+AGG | - | chr5_3:5097780-5097799 | None:intergenic | 45.0% | |
| ! | TTTCTTGTTAATGGTGGCGC+AGG | + | chr5_3:5097780-5097799 | Msa0793090:intron | 45.0% |
| GCTGTCTCTTTCATGGGTAA+TGG | - | chr5_3:5097870-5097889 | None:intergenic | 45.0% | |
| GCTCAAAGCTGTCTCTTTCA+TGG | - | chr5_3:5097877-5097896 | None:intergenic | 45.0% | |
| !! | AAAGAGACAGCTTTGAGCCA+TGG | + | chr5_3:5097879-5097898 | Msa0793090:CDS | 45.0% |
| ACCTATGGCAACATATGAGG+AGG | + | chr5_3:5097914-5097933 | Msa0793090:CDS | 45.0% | |
| ACCTCCTCATATGTTGCCAT+AGG | - | chr5_3:5097918-5097937 | None:intergenic | 45.0% | |
| TGCAGGATTCCTGTTATTGG+GGG | + | chr5_3:5098188-5098207 | Msa0793090:intron | 45.0% | |
| GATTCCTGTTATTGGGGGAA+GGG | + | chr5_3:5098193-5098212 | Msa0793090:CDS | 45.0% | |
| AATTCCCTTCCCCCAATAAC+AGG | - | chr5_3:5098200-5098219 | None:intergenic | 45.0% | |
| TGTTATTGGGGGAAGGGAAT+TGG | + | chr5_3:5098199-5098218 | Msa0793090:CDS | 45.0% | |
| TTGAAGTGACTTCTCGTGGA+GGG | + | chr5_3:5098240-5098259 | Msa0793090:CDS | 45.0% | |
| ! | CGCCTCAGTGTCCTATATTT+TGG | - | chr5_3:5098365-5098384 | None:intergenic | 45.0% |
| ! | GAAGCATTTGTAGCCGTTGA+TGG | - | chr5_3:5098692-5098711 | None:intergenic | 45.0% |
| !! | GAAAACTGCATCTTTGGAGC+AGG | - | chr5_3:5098922-5098941 | None:intergenic | 45.0% |
| AAGACAGCTGGTTGAACTTG+TGG | - | chr5_3:5098955-5098974 | None:intergenic | 45.0% | |
| GGGGTGTAGTTGCAATTGTT+TGG | + | chr5_3:5099126-5099145 | Msa0793090:intron | 45.0% | |
| TTAACCTGTCGGGATATTGG+GGG | + | chr5_3:5099218-5099237 | Msa0793090:intron | 45.0% | |
| GCAATCCATTGCAAAATCCG+AGG | + | chr5_3:5099955-5099974 | Msa0793090:intron | 45.0% | |
| ! | ATCTCCCTCGGATTTTGCAA+TGG | - | chr5_3:5099963-5099982 | None:intergenic | 45.0% |
| ATTGCAAAATCCGAGGGAGA+TGG | + | chr5_3:5099962-5099981 | Msa0793090:intron | 45.0% | |
| TCAACACCACCTAGTGGTAT+AGG | + | chr5_3:5100565-5100584 | Msa0793090:intron | 45.0% | |
| CAACACCACCTAGTGGTATA+GGG | + | chr5_3:5100566-5100585 | Msa0793090:intron | 45.0% | |
| TCAAACCCTATACCACTAGG+TGG | - | chr5_3:5100574-5100593 | None:intergenic | 45.0% | |
| TTCTCTTGTGCTCTCAGCAA+TGG | + | chr5_3:5100755-5100774 | Msa0793090:intron | 45.0% | |
| TCTCTTGTGCTCTCAGCAAT+GGG | + | chr5_3:5100756-5100775 | Msa0793090:intron | 45.0% | |
| CTCAGCAATGGGATCATCTT+CGG | + | chr5_3:5100767-5100786 | Msa0793090:intron | 45.0% | |
| GTTAGCAGGAACACTATGGT+GGG | - | chr5_3:5100922-5100941 | None:intergenic | 45.0% | |
| TGTTAGCAGGAACACTATGG+TGG | - | chr5_3:5100923-5100942 | None:intergenic | 45.0% | |
| TCTCTGATTTCTTCCTGCGT+CGG | - | chr5_3:5100980-5100999 | None:intergenic | 45.0% | |
| CACCCAAAACCAAACAGAAG+TGG | + | chr5_3:5101020-5101039 | Msa0793090:CDS | 45.0% | |
| TCTTTGCAGAACAGCATCCA+AGG | + | chr5_3:5101054-5101073 | Msa0793090:CDS | 45.0% | |
| CGAGAGATTAGTAGGACCAT+TGG | + | chr5_3:5101104-5101123 | Msa0793090:CDS | 45.0% | |
| CTTGTTCCAGAGTTCACCAA+TGG | - | chr5_3:5101123-5101142 | None:intergenic | 45.0% | |
| GAGCAGGATAGTTTAGGAAC+TGG | - | chr5_3:5101229-5101248 | None:intergenic | 45.0% | |
| GTACCTCTCTTTGTCCTTCA+CGG | - | chr5_3:5101500-5101519 | None:intergenic | 45.0% | |
| TCAGGAAATCGCTGTTGAAG+TGG | - | chr5_3:5101586-5101605 | None:intergenic | 45.0% | |
| TCATTGCCTGTTATGGGAGT+TGG | + | chr5_3:5101727-5101746 | Msa0793090:CDS | 45.0% | |
| ! | CACAGTGATCAACTGGGTTT+TGG | + | chr5_3:5101900-5101919 | Msa0793090:three_prime_UTR | 45.0% |
| TTCCGCGTCTGATCTCTAAA+TGG | + | chr5_3:5102013-5102032 | Msa0793090:three_prime_UTR | 45.0% | |
| GACCATTTAGAGATCAGACG+CGG | - | chr5_3:5102018-5102037 | None:intergenic | 45.0% | |
| !!! | TTTTTTTAAAACAAAAAAAT+GGG | - | chr5_3:5097093-5097112 | None:intergenic | 5.0% |
| !!! | ATTTTTTTAAAACAAAAAAA+TGG | - | chr5_3:5097094-5097113 | None:intergenic | 5.0% |
| !!! | TGTTTTAAAAAAATTTATTT+TGG | + | chr5_3:5097100-5097119 | Msa0793090:intron | 5.0% |
| !! | TAAATGAAAAATTATAATAA+TGG | + | chr5_3:5100099-5100118 | Msa0793090:intron | 5.0% |
| GAGAAGCTCCACACTCTCAT+GGG | + | chr5_3:5097972-5097991 | Msa0793090:CDS | 50.0% | |
| CATGGGCACCAAGTTCATGT+AGG | + | chr5_3:5097989-5098008 | Msa0793090:intron | 50.0% | |
| GGATTCCTGTTATTGGGGGA+AGG | + | chr5_3:5098192-5098211 | Msa0793090:intron | 50.0% | |
| GTTGAAGTGACTTCTCGTGG+AGG | + | chr5_3:5098239-5098258 | Msa0793090:CDS | 50.0% | |
| GTTAATTCTGCTCCGCCTGA+AGG | + | chr5_3:5098988-5099007 | Msa0793090:CDS | 50.0% | |
| GCAAAGCAAAGACCTTCAGG+CGG | - | chr5_3:5099003-5099022 | None:intergenic | 50.0% | |
| TAACCTGTCGGGATATTGGG+GGG | + | chr5_3:5099219-5099238 | Msa0793090:intron | 50.0% | |
| TTGCAGTCAACACCACCTAG+TGG | + | chr5_3:5100559-5100578 | Msa0793090:intron | 50.0% | |
| ATCATCTTCGGCAGGATCTC+AGG | + | chr5_3:5100779-5100798 | Msa0793090:CDS | 50.0% | |
| AGGTTGTCGGGGTCATTGAT+GGG | + | chr5_3:5100799-5100818 | Msa0793090:CDS | 50.0% | |
| !!! | CTGTTTGGTTTTGGGTGAGC+AGG | - | chr5_3:5101017-5101036 | None:intergenic | 50.0% |
| !! | CGGTGAAGAGGTTTTAGCCT+TGG | - | chr5_3:5101074-5101093 | None:intergenic | 50.0% |
| AGGCTAAAACCTCTTCACCG+AGG | + | chr5_3:5101074-5101093 | Msa0793090:CDS | 50.0% | |
| GGCTAAAACCTCTTCACCGA+GGG | + | chr5_3:5101075-5101094 | Msa0793090:CDS | 50.0% | |
| AAAACCTCTTCACCGAGGGA+AGG | + | chr5_3:5101079-5101098 | Msa0793090:CDS | 50.0% | |
| TAATCTCTCGGTCCTTCCCT+CGG | - | chr5_3:5101094-5101113 | None:intergenic | 50.0% | |
| GGAAGGACCGAGAGATTAGT+AGG | + | chr5_3:5101096-5101115 | Msa0793090:CDS | 50.0% | |
| GTAGGACCATTGGTGAACTC+TGG | + | chr5_3:5101114-5101133 | Msa0793090:CDS | 50.0% | |
| AAGCCGTGAAGGACAAAGAG+AGG | + | chr5_3:5101494-5101513 | Msa0793090:CDS | 50.0% | |
| GGCAGACTCTCTTCAAACTC+CGG | + | chr5_3:5101633-5101652 | Msa0793090:CDS | 50.0% | |
| TCAGCACCAACTCCCATAAC+AGG | - | chr5_3:5101736-5101755 | None:intergenic | 50.0% | |
| !! | GCTGAGACTTTGAGTTGCAG+TGG | + | chr5_3:5101856-5101875 | Msa0793090:three_prime_UTR | 50.0% |
| GGAGAAGCTCCACACTCTCA+TGG | + | chr5_3:5097971-5097990 | Msa0793090:CDS | 55.0% | |
| !! | ACTTGGTGCCCATGAGAGTG+TGG | - | chr5_3:5097983-5098002 | None:intergenic | 55.0% |
| CCAGGGAGCCTACATGAACT+TGG | - | chr5_3:5098000-5098019 | None:intergenic | 55.0% | |
| CCAAGTTCATGTAGGCTCCC+TGG | + | chr5_3:5097997-5098016 | Msa0793090:intron | 55.0% | |
| !! | GCATCTTTGGAGCAGGAGCT+GGG | - | chr5_3:5098915-5098934 | None:intergenic | 55.0% |
| !! | TGCATCTTTGGAGCAGGAGC+TGG | - | chr5_3:5098916-5098935 | None:intergenic | 55.0% |
| GCAATGGGATCATCTTCGGC+AGG | + | chr5_3:5100771-5100790 | Msa0793090:intron | 55.0% | |
| ! | TCGGCAGGATCTCAGGTTGT+CGG | + | chr5_3:5100786-5100805 | Msa0793090:CDS | 55.0% |
| CAGGTTGTCGGGGTCATTGA+TGG | + | chr5_3:5100798-5100817 | Msa0793090:CDS | 55.0% | |
| ! | GCTGGCAGCACAGGATTTTG+TGG | - | chr5_3:5100897-5100916 | None:intergenic | 55.0% |
| ! | GGAACACTATGGTGGGATGC+TGG | - | chr5_3:5100915-5100934 | None:intergenic | 55.0% |
| ! | GCGGTCACGTTGTTGTTAGC+AGG | - | chr5_3:5100936-5100955 | None:intergenic | 55.0% |
| AACAACGTGACCGCCTCTGT+CGG | + | chr5_3:5100942-5100961 | Msa0793090:CDS | 55.0% | |
| CGGTGTGTAGACACACAGTC+AGG | - | chr5_3:5101382-5101401 | None:intergenic | 55.0% | |
| CCGTCTGAACTACTCTGCTC+CGG | - | chr5_3:5101655-5101674 | None:intergenic | 55.0% | |
| CCGGAGCAGAGTAGTTCAGA+CGG | + | chr5_3:5101652-5101671 | Msa0793090:CDS | 55.0% | |
| !! | CTTTGGAGCAGGAGCTGGGA+TGG | - | chr5_3:5098911-5098930 | None:intergenic | 60.0% |
| TCACCCCCCAATATCCCGAC+AGG | - | chr5_3:5099225-5099244 | None:intergenic | 60.0% | |
| ! | CGGCAGGATCTCAGGTTGTC+GGG | + | chr5_3:5100787-5100806 | Msa0793090:CDS | 60.0% |
| ! | GGCAGGATCTCAGGTTGTCG+GGG | + | chr5_3:5100788-5100807 | Msa0793090:CDS | 60.0% |
| ACGATGGACACCGACAGAGG+CGG | - | chr5_3:5100955-5100974 | None:intergenic | 60.0% | |
| TGGTGGGATGCTGGCAGCAC+AGG | - | chr5_3:5100906-5100925 | None:intergenic | 65.0% | |
| GCGACGATGGACACCGACAG+AGG | - | chr5_3:5100958-5100977 | None:intergenic | 65.0% | |
| ! | TCTTCCTGCGTCGGCGACGA+TGG | - | chr5_3:5100971-5100990 | None:intergenic | 65.0% |
| CGGTCCTTCCCTCGGTGAAG+AGG | - | chr5_3:5101086-5101105 | None:intergenic | 65.0% | |
| GTGTCCATCGTCGCCGACGC+AGG | + | chr5_3:5100964-5100983 | Msa0793090:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 5096315 | 5102115 | 5096315 | ID=Msa0793090;Name=Msa0793090 |
| chr5_3 | mRNA | 5096315 | 5102115 | 5096315 | ID=Msa0793090-mRNA-1;Parent=Msa0793090;Name=Msa0793090-mRNA-1;_AED=0.16;_eAED=0.16;_QI=68|1|1|1|0.83|0.57|7|353|402 |
| chr5_3 | exon | 5096315 | 5096347 | 5096315 | ID=Msa0793090-mRNA-1:exon:1962;Parent=Msa0793090-mRNA-1 |
| chr5_3 | exon | 5097802 | 5098006 | 5097802 | ID=Msa0793090-mRNA-1:exon:1963;Parent=Msa0793090-mRNA-1 |
| chr5_3 | exon | 5098193 | 5098271 | 5098193 | ID=Msa0793090-mRNA-1:exon:1964;Parent=Msa0793090-mRNA-1 |
| chr5_3 | exon | 5098641 | 5098803 | 5098641 | ID=Msa0793090-mRNA-1:exon:1965;Parent=Msa0793090-mRNA-1 |
| chr5_3 | exon | 5098887 | 5099009 | 5098887 | ID=Msa0793090-mRNA-1:exon:1966;Parent=Msa0793090-mRNA-1 |
| chr5_3 | exon | 5100772 | 5101163 | 5100772 | ID=Msa0793090-mRNA-1:exon:1967;Parent=Msa0793090-mRNA-1 |
| chr5_3 | exon | 5101481 | 5102115 | 5101481 | ID=Msa0793090-mRNA-1:exon:1968;Parent=Msa0793090-mRNA-1 |
| chr5_3 | five_prime_UTR | 5096315 | 5096347 | 5096315 | ID=Msa0793090-mRNA-1:five_prime_utr;Parent=Msa0793090-mRNA-1 |
| chr5_3 | five_prime_UTR | 5097802 | 5097836 | 5097802 | ID=Msa0793090-mRNA-1:five_prime_utr;Parent=Msa0793090-mRNA-1 |
| chr5_3 | CDS | 5097837 | 5098006 | 5097837 | ID=Msa0793090-mRNA-1:cds;Parent=Msa0793090-mRNA-1 |
| chr5_3 | CDS | 5098193 | 5098271 | 5098193 | ID=Msa0793090-mRNA-1:cds;Parent=Msa0793090-mRNA-1 |
| chr5_3 | CDS | 5098641 | 5098803 | 5098641 | ID=Msa0793090-mRNA-1:cds;Parent=Msa0793090-mRNA-1 |
| chr5_3 | CDS | 5098887 | 5099009 | 5098887 | ID=Msa0793090-mRNA-1:cds;Parent=Msa0793090-mRNA-1 |
| chr5_3 | CDS | 5100772 | 5101163 | 5100772 | ID=Msa0793090-mRNA-1:cds;Parent=Msa0793090-mRNA-1 |
| chr5_3 | CDS | 5101481 | 5101762 | 5101481 | ID=Msa0793090-mRNA-1:cds;Parent=Msa0793090-mRNA-1 |
| chr5_3 | three_prime_UTR | 5101763 | 5102115 | 5101763 | ID=Msa0793090-mRNA-1:three_prime_utr;Parent=Msa0793090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
