AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1235040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235040 MtrunA17_Chr8g0336851 92.308 364 28 0 1 364 1 364 0.0 702
Msa1235040 MtrunA17_Chr8g0336861 88.798 366 39 2 1 364 1 366 0.0 668
Msa1235040 MtrunA17_Chr8g0336781 84.932 365 54 1 1 364 36 400 0.0 659
Msa1235040 MtrunA17_Chr8g0336761 85.714 364 52 0 1 364 1 364 0.0 657
Msa1235040 MtrunA17_Chr8g0348081 85.989 364 51 0 1 364 1 364 0.0 654
Msa1235040 MtrunA17_Chr8g0336631 83.562 365 59 1 1 364 1 365 0.0 641
Msa1235040 MtrunA17_Chr4g0066121 72.131 366 100 2 1 364 1 366 0.0 557
Msa1235040 MtrunA17_Chr2g0311831 69.914 349 101 2 19 364 24 371 0.0 521
Msa1235040 MtrunA17_Chr2g0311761 69.492 354 103 3 15 364 20 372 0.0 518
Msa1235040 MtrunA17_Chr2g0311921 65.537 354 117 3 15 364 6 358 4.11e-178 498
Msa1235040 MtrunA17_Chr8g0336751 65.470 362 120 4 6 364 38 397 3.35e-177 498
Msa1235040 MtrunA17_Chr2g0311861 63.115 366 110 4 2 364 4 347 5.61e-172 482
Msa1235040 MtrunA17_Chr1g0167951 61.383 347 131 3 19 364 11 355 3.75e-162 457
Msa1235040 MtrunA17_Chr1g0167961 60.057 353 136 4 15 364 22 372 1.43e-156 444
Msa1235040 MtrunA17_Chr1g0167911 58.571 350 141 3 16 363 8 355 1.63e-149 426
Msa1235040 MtrunA17_Chr8g0354261 57.183 355 143 4 17 364 22 374 2.06e-149 426
Msa1235040 MtrunA17_Chr8g0354241 56.620 355 145 4 17 364 22 374 3.30e-148 423
Msa1235040 MtrunA17_Chr8g0336831 80.498 241 46 1 1 240 1 241 2.64e-144 409
Msa1235040 MtrunA17_Chr1g0187821 51.695 354 164 3 17 364 18 370 1.55e-142 409
Msa1235040 MtrunA17_Chr7g0235951 50.704 355 169 3 15 364 20 373 5.61e-140 402
Msa1235040 MtrunA17_Chr8g0364471 50.543 368 173 5 5 364 7 373 1.60e-139 401
Msa1235040 MtrunA17_Chr1g0187811 50.396 379 167 6 4 364 118 493 2.24e-139 405
Msa1235040 MtrunA17_Chr1g0187831 51.404 356 163 4 17 363 19 373 1.40e-137 397
Msa1235040 MtrunA17_Chr7g0225881 53.056 360 155 4 15 364 15 370 3.07e-137 395
Msa1235040 MtrunA17_Chr2g0311701 52.381 357 160 4 16 364 21 375 3.62e-137 395
Msa1235040 MtrunA17_Chr6g0472861 53.994 363 150 4 15 364 15 373 2.65e-136 393
Msa1235040 MtrunA17_Chr8g0335411 52.975 353 160 3 17 364 22 373 6.18e-135 389
Msa1235040 MtrunA17_Chr1g0167931 53.714 350 120 3 17 364 9 318 6.60e-134 385
Msa1235040 MtrunA17_Chr2g0311681 51.075 372 171 5 1 364 1 369 7.56e-134 386
Msa1235040 MtrunA17_Chr2g0311741 57.556 311 128 3 54 364 21 327 2.49e-132 381
Msa1235040 MtrunA17_Chr7g0247991 51.558 353 165 3 17 364 22 373 1.20e-131 381
Msa1235040 MtrunA17_Chr2g0311691 51.344 372 170 6 1 364 1 369 2.92e-131 380
Msa1235040 MtrunA17_Chr4g0055591 50.425 353 161 4 19 364 16 361 9.48e-130 376
Msa1235040 MtrunA17_Chr7g0236011 50.425 353 169 3 17 364 22 373 3.06e-126 367
Msa1235040 MtrunA17_Chr2g0311711 49.857 349 168 4 16 359 19 365 1.40e-125 365
Msa1235040 MtrunA17_Chr4g0066991 50.970 361 148 6 12 364 14 353 4.14e-123 358
Msa1235040 MtrunA17_Chr1g0184241 47.278 349 181 1 16 364 22 367 1.89e-118 347
Msa1235040 MtrunA17_Chr8g0336871 87.778 180 16 1 185 364 1 174 6.47e-111 321
Msa1235040 MtrunA17_Chr8g0336791 79.275 193 39 1 1 192 1 193 4.26e-110 319
Msa1235040 MtrunA17_Chr7g0235981 46.023 352 154 5 17 364 8 327 7.13e-107 316
Msa1235040 MtrunA17_Chr4g0011311 47.719 285 143 3 3 282 5 288 1.61e-97 292
Msa1235040 MtrunA17_Chr8g0336801 85.897 156 22 0 209 364 1 156 7.98e-97 284
Msa1235040 MtrunA17_Chr7g0266651 40.000 350 204 3 19 364 15 362 2.66e-95 288
Msa1235040 MtrunA17_Chr1g0161081 40.857 350 196 4 19 363 28 371 1.76e-89 273
Msa1235040 MtrunA17_Chr1g0161041 41.096 365 204 4 4 363 36 394 1.39e-88 272
Msa1235040 MtrunA17_Chr8g0362741 46.996 283 129 5 5 282 7 273 2.82e-88 267
Msa1235040 MtrunA17_Chr1g0161111 40.936 342 191 4 19 355 87 422 4.73e-87 269
Msa1235040 MtrunA17_Chr7g0242551 34.174 357 216 8 19 360 6 358 1.95e-66 214
Msa1235040 MtrunA17_Chr2g0311631 36.857 350 200 9 27 364 21 361 1.97e-63 206
Msa1235040 MtrunA17_Chr4g0006371 33.894 357 208 7 28 360 14 366 1.33e-62 204
Msa1235040 MtrunA17_Chr8g0375571 34.375 320 196 7 53 364 37 350 5.18e-60 197
Msa1235040 MtrunA17_Chr3g0128001 35.599 309 184 5 60 363 38 336 9.22e-60 196
Msa1235040 MtrunA17_Chr1g0168001 54.819 166 65 4 17 174 9 172 8.42e-57 182
Msa1235040 MtrunA17_Chr1g0179801 32.865 356 213 8 27 364 26 373 2.18e-56 188
Msa1235040 MtrunA17_Chr7g0265221 31.536 371 214 11 23 364 21 380 8.61e-56 187
Msa1235040 MtrunA17_Chr5g0437181 34.603 315 195 5 56 363 45 355 1.44e-55 186
Msa1235040 MtrunA17_Chr3g0109041 32.941 340 210 7 28 355 10 343 3.58e-55 184
Msa1235040 MtrunA17_Chr5g0426891 32.184 348 218 8 27 364 3 342 1.08e-54 183
Msa1235040 MtrunA17_Chr3g0126741 32.172 373 223 10 3 363 6 360 1.11e-54 183
Msa1235040 MtrunA17_Chr8g0345831 32.692 312 201 3 56 364 38 343 1.61e-54 182
Msa1235040 MtrunA17_Chr3g0113641 30.986 355 231 6 19 363 6 356 6.45e-54 181
Msa1235040 MtrunA17_Chr5g0412651 34.343 297 182 5 60 348 38 329 5.13e-53 179
Msa1235040 MtrunA17_Chr3g0093741 33.908 348 210 6 27 364 17 354 9.47e-53 178
Msa1235040 MtrunA17_Chr3g0093751 33.621 348 211 6 27 364 17 354 1.89e-52 177
Msa1235040 MtrunA17_Chr3g0093761 34.097 349 207 8 27 364 17 353 7.62e-52 176
Msa1235040 MtrunA17_Chr7g0265351 35.535 318 185 6 54 364 33 337 8.29e-52 175
Msa1235040 MtrunA17_Chr5g0412681 33.654 312 178 7 57 356 30 324 1.31e-51 175
Msa1235040 MtrunA17_Chr8g0375671 32.258 310 201 5 60 364 52 357 1.72e-51 175
Msa1235040 MtrunA17_Chr4g0045441 31.627 332 193 8 60 364 26 350 1.82e-51 175
Msa1235040 MtrunA17_Chr8g0375701 31.944 360 212 12 23 364 11 355 2.06e-51 174
Msa1235040 MtrunA17_Chr1g0162361 35.390 308 164 8 60 346 27 320 5.12e-51 173
Msa1235040 MtrunA17_Chr5g0423191 31.737 334 202 8 47 364 25 348 1.42e-50 172
Msa1235040 MtrunA17_Chr5g0421101 30.946 349 218 10 27 364 12 348 2.32e-50 172
Msa1235040 MtrunA17_Chr1g0184151 34.405 311 191 7 57 362 35 337 3.57e-50 171
Msa1235040 MtrunA17_Chr5g0412671 33.775 302 186 8 60 352 38 334 4.18e-50 171
Msa1235040 MtrunA17_Chr5g0423201 30.747 348 221 9 27 364 12 349 5.09e-50 171
Msa1235040 MtrunA17_Chr2g0314391 30.372 349 222 10 27 364 35 373 6.34e-50 171
Msa1235040 MtrunA17_Chr4g0045411 31.613 310 173 7 60 344 30 325 8.05e-50 170
Msa1235040 MtrunA17_Chr5g0420951 29.558 362 240 7 11 364 1 355 1.10e-49 170
Msa1235040 MtrunA17_Chr4g0050031 34.727 311 191 7 60 364 62 366 1.47e-49 170
Msa1235040 MtrunA17_Chr5g0420941 30.226 354 214 7 27 364 10 346 2.12e-49 169
Msa1235040 MtrunA17_Chr8g0375601 29.395 347 230 8 28 364 11 352 2.41e-49 170
Msa1235040 MtrunA17_Chr5g0421041 28.902 346 227 8 27 364 12 346 6.51e-49 168
Msa1235040 MtrunA17_Chr5g0423221 30.172 348 223 10 27 364 36 373 8.43e-49 168
Msa1235040 MtrunA17_Chr1g0184121 32.051 312 196 5 59 363 36 338 8.89e-49 167
Msa1235040 MtrunA17_Chr6g0455481 33.981 309 182 8 53 352 35 330 9.31e-49 167
Msa1235040 MtrunA17_Chr1g0162351 32.268 313 178 7 60 346 69 373 1.75e-48 168
Msa1235040 MtrunA17_Chr2g0314381 29.430 316 210 7 55 364 72 380 2.10e-48 167
Msa1235040 MtrunA17_Chr8g0364161 46.243 173 77 4 10 172 12 178 2.52e-48 161
Msa1235040 MtrunA17_Chr1g0184111 31.410 312 198 5 59 363 36 338 6.28e-48 165
Msa1235040 MtrunA17_Chr1g0162321 31.629 313 180 7 60 346 69 373 2.06e-47 165
Msa1235040 MtrunA17_Chr5g0421011 29.191 346 228 8 27 364 12 348 3.45e-47 164
Msa1235040 MtrunA17_Chr2g0314401 29.799 349 224 11 27 364 16 354 4.14e-47 163
Msa1235040 MtrunA17_Chr1g0184161 31.269 323 207 8 46 363 26 338 4.59e-47 163
Msa1235040 MtrunA17_Chr5g0421091 31.073 354 212 11 27 364 10 347 5.55e-47 163
Msa1235040 MtrunA17_Chr4g0045451 31.788 302 174 7 60 337 26 319 5.63e-47 163
Msa1235040 MtrunA17_Chr5g0423251 30.259 347 223 9 27 364 12 348 6.94e-47 163
Msa1235040 MtrunA17_Chr8g0365241 28.895 353 237 7 10 355 5 350 8.54e-47 163
Msa1235040 MtrunA17_Chr4g0045431 32.335 334 188 11 60 364 26 350 8.59e-47 162
Msa1235040 MtrunA17_Chr5g0420901 31.214 346 221 9 27 364 11 347 1.77e-46 162
Msa1235040 MtrunA17_Chr8g0375681 32.971 276 174 7 95 364 15 285 1.80e-46 160
Msa1235040 MtrunA17_Chr5g0423211 30.571 350 220 9 27 364 12 350 2.96e-46 161
Msa1235040 MtrunA17_Chr5g0420981 28.613 346 232 7 27 364 17 355 7.96e-46 160
Msa1235040 MtrunA17_Chr4g0045471 30.473 338 190 9 60 364 26 351 1.11e-45 159
Msa1235040 MtrunA17_Chr7g0220011 32.484 314 169 9 60 354 39 328 1.91e-45 158
Msa1235040 MtrunA17_Chr7g0220001 32.602 319 189 8 46 352 24 328 8.79e-45 157
Msa1235040 MtrunA17_Chr1g0162191 30.000 290 192 6 60 344 47 330 2.04e-44 156
Msa1235040 MtrunA17_Chr5g0398291 29.532 342 210 8 28 347 8 340 2.10e-44 156
Msa1235040 MtrunA17_Chr8g0371931 33.579 271 170 5 54 317 33 300 1.33e-43 154
Msa1235040 MtrunA17_Chr1g0184101 30.976 297 186 7 60 348 38 323 1.84e-43 153
Msa1235040 MtrunA17_Chr1g0167921 61.682 107 41 0 175 281 50 156 2.01e-43 148
Msa1235040 MtrunA17_Chr7g0250511 29.483 329 213 8 30 348 16 335 2.87e-43 153
Msa1235040 MtrunA17_Chr7g0239111 28.000 350 228 11 27 364 19 356 3.60e-43 153
Msa1235040 MtrunA17_Chr7g0239821 29.619 341 212 10 38 364 39 365 3.28e-42 151
Msa1235040 MtrunA17_Chr2g0296371 29.524 315 204 7 60 364 50 356 4.96e-42 150
Msa1235040 MtrunA17_Chr3g0125201 32.624 282 170 9 59 332 2 271 1.02e-41 148
Msa1235040 MtrunA17_Chr2g0332191 33.117 308 169 11 56 346 48 335 1.04e-41 149
Msa1235040 MtrunA17_Chr7g0239101 27.195 353 227 10 27 364 19 356 1.05e-41 149
Msa1235040 MtrunA17_Chr8g0371921 32.246 276 169 6 54 318 33 301 1.19e-41 149
Msa1235040 MtrunA17_Chr5g0405411 32.872 289 177 8 54 330 33 316 2.17e-41 148
Msa1235040 MtrunA17_Chr2g0289341 32.509 283 161 10 61 331 5 269 2.45e-41 147
Msa1235040 MtrunA17_Chr8g0336841 78.313 83 18 0 282 364 9 91 8.46e-41 139
Msa1235040 MtrunA17_Chr7g0239121 27.193 342 228 9 27 357 15 346 9.57e-41 147
Msa1235040 MtrunA17_Chr2g0319491 32.765 293 169 8 60 344 33 305 1.54e-40 145
Msa1235040 MtrunA17_Chr1g0148771 30.061 326 184 12 50 359 53 350 2.32e-40 145
Msa1235040 MtrunA17_Chr3g0145171 30.159 315 198 8 60 364 52 354 4.46e-40 145
Msa1235040 MtrunA17_Chr5g0424201 30.717 293 187 5 60 345 44 327 5.02e-40 144
Msa1235040 MtrunA17_Chr3g0102041 33.453 278 161 7 54 317 33 300 1.39e-39 143
Msa1235040 MtrunA17_Chr8g0364171 52.727 110 52 0 173 282 17 126 2.50e-39 136
Msa1235040 MtrunA17_Chr7g0235991 42.254 142 81 1 61 202 22 162 5.57e-39 137
Msa1235040 MtrunA17_Chr1g0204181 32.537 335 196 9 23 336 17 342 6.02e-39 142
Msa1235040 MtrunA17_Chr1g0191201 30.693 303 191 6 47 336 40 336 1.34e-38 141
Msa1235040 MtrunA17_Chr5g0439011 31.338 284 173 9 61 336 6 275 1.75e-38 139
Msa1235040 MtrunA17_Chr4g0064781 30.303 297 183 7 51 337 41 323 1.77e-38 140
Msa1235040 MtrunA17_Chr3g0121141 30.662 287 175 10 60 336 4 276 3.39e-38 139
Msa1235040 MtrunA17_Chr7g0239091 28.483 323 210 6 46 364 146 451 8.23e-38 141
Msa1235040 MtrunA17_Chr8g0370711 29.841 315 199 8 60 364 52 354 1.15e-37 138
Msa1235040 MtrunA17_Chr4g0045461 31.229 301 176 7 60 337 26 318 1.48e-37 138
Msa1235040 MtrunA17_Chr5g0424211 30.314 287 176 7 60 334 42 316 1.98e-37 137
Msa1235040 MtrunA17_Chr6g0474391 31.023 303 191 5 47 336 50 347 4.57e-37 137
Msa1235040 MtrunA17_Chr8g0370721 29.206 315 201 8 60 364 52 354 8.81e-36 133
Msa1235040 MtrunA17_Chr3g0092531 31.973 294 167 11 59 337 5 280 2.65e-35 131
Msa1235040 MtrunA17_Chr3g0105281 31.618 272 158 9 52 310 23 279 3.11e-35 131
Msa1235040 MtrunA17_Chr3g0125421 30.312 320 202 9 47 350 23 337 3.80e-35 132
Msa1235040 MtrunA17_Chr7g0232161 29.450 309 187 11 27 317 24 319 9.21e-35 130
Msa1235040 MtrunA17_Chr5g0420721 31.004 229 150 4 141 364 25 250 9.62e-35 128
Msa1235040 MtrunA17_Chr3g0087031 27.597 308 208 8 53 354 53 351 1.98e-34 130
Msa1235040 MtrunA17_Chr8g0351101 30.573 314 198 8 60 357 54 363 5.76e-34 129
Msa1235040 MtrunA17_Chr6g0488511 29.514 288 171 9 59 332 2 271 2.39e-33 125
Msa1235040 MtrunA17_Chr3g0126761 35.897 195 119 4 171 363 41 231 7.56e-33 122
Msa1235040 MtrunA17_Chr3g0130391 27.778 288 191 4 61 336 67 349 1.40e-31 122
Msa1235040 MtrunA17_Chr1g0161101 42.515 167 84 3 159 324 346 501 3.47e-31 123
Msa1235040 MtrunA17_Chr7g0239071 26.523 279 192 5 93 364 29 301 7.69e-31 119
Msa1235040 MtrunA17_Chr3g0145181 28.105 306 187 11 60 348 49 338 1.01e-30 119
Msa1235040 MtrunA17_Chr3g0114861 28.975 283 177 7 76 344 49 321 2.33e-30 118
Msa1235040 MtrunA17_Chr2g0311751 44.628 121 66 1 54 174 21 140 2.41e-30 114
Msa1235040 MtrunA17_Chr1g0170631 35.533 197 118 7 172 364 1 192 1.49e-29 112
Msa1235040 MtrunA17_Chr3g0145201 27.961 304 190 10 60 348 684 973 1.94e-29 120
Msa1235040 MtrunA17_Chr8g0384461 25.074 339 231 6 29 351 12 343 3.25e-29 115
Msa1235040 MtrunA17_Chr4g0068891 30.435 299 179 11 59 344 19 301 4.10e-29 114
Msa1235040 MtrunA17_Chr2g0313111 27.362 307 188 8 52 344 20 305 7.77e-29 114
Msa1235040 MtrunA17_Chr2g0314371 28.627 255 152 5 55 282 47 298 5.50e-28 112
Msa1235040 MtrunA17_Chr5g0394071 34.659 176 102 2 176 349 4 168 7.82e-28 107
Msa1235040 MtrunA17_Chr5g0407731 27.703 296 186 9 59 346 32 307 1.10e-27 111
Msa1235040 MtrunA17_Chr4g0037611 41.406 128 74 1 184 310 1 128 1.52e-27 107
Msa1235040 MtrunA17_Chr2g0285931 29.276 304 178 11 60 344 28 313 2.43e-27 110
Msa1235040 MtrunA17_Chr8g0358941 28.339 307 178 10 60 344 27 313 1.20e-26 108
Msa1235040 MtrunA17_Chr6g0486831 27.331 311 192 10 62 346 20 322 1.45e-26 108
Msa1235040 MtrunA17_Chr5g0407781 25.879 313 204 8 60 364 5 297 2.34e-26 106
Msa1235040 MtrunA17_Chr5g0420881 35.616 146 90 2 220 364 2 144 5.21e-26 102
Msa1235040 MtrunA17_Chr3g0114871 28.261 276 170 8 23 282 2 265 9.85e-25 102
Msa1235040 MtrunA17_Chr8g0389941 26.537 309 191 9 65 346 34 333 2.66e-24 102
Msa1235040 MtrunA17_Chr7g0233661 39.844 128 68 1 222 349 24 142 3.14e-24 97.4
Msa1235040 MtrunA17_Chr1g0194321 27.928 333 192 12 60 364 20 332 1.13e-23 100
Msa1235040 MtrunA17_Chr7g0247741 30.072 276 170 9 85 347 30 295 1.49e-23 99.8
Msa1235040 MtrunA17_Chr3g0092581 34.416 154 93 4 187 337 4 152 1.93e-23 95.9
Msa1235040 MtrunA17_Chr8g0384481 23.392 342 234 8 39 361 38 370 4.49e-23 99.0
Msa1235040 MtrunA17_Chr4g0075471 43.956 91 50 1 222 311 32 122 1.02e-22 93.2
Msa1235040 MtrunA17_Chr8g0348951 26.710 307 196 11 57 347 2 295 1.78e-22 96.7
Msa1235040 MtrunA17_Chr4g0053251 28.339 307 171 13 60 331 8 300 4.74e-21 92.4
Msa1235040 MtrunA17_Chr2g0311611 52.857 70 26 1 220 282 2 71 3.07e-20 83.6
Msa1235040 MtrunA17_Chr4g0064771 32.919 161 103 3 179 337 31 188 5.91e-20 87.0
Msa1235040 MtrunA17_Chr4g0055911 25.714 315 196 11 53 345 2 300 7.84e-20 89.0
Msa1235040 MtrunA17_Chr2g0319521 34.862 109 71 0 174 282 16 124 1.37e-19 84.0
Msa1235040 MtrunA17_Chr1g0158011 27.189 217 150 5 152 364 49 261 5.46e-18 82.8
Msa1235040 MtrunA17_Chr4g0055871 25.159 314 192 11 53 344 2 294 7.15e-18 83.2
Msa1235040 MtrunA17_Chr4g0052251 26.421 299 183 11 67 344 31 313 1.05e-17 83.2
Msa1235040 MtrunA17_Chr1g0158021 26.068 234 162 6 44 274 36 261 1.79e-17 81.3
Msa1235040 MtrunA17_Chr2g0311641 32.895 152 93 5 27 174 21 167 1.98e-17 79.0
Msa1235040 MtrunA17_Chr7g0219991 37.383 107 65 2 175 280 249 354 2.73e-17 82.0
Msa1235040 MtrunA17_Chr2g0293931 36.054 147 84 4 180 316 13 159 4.35e-17 79.0
Msa1235040 MtrunA17_Chr8g0375581 40.230 87 49 3 195 279 1 86 1.36e-15 71.2
Msa1235040 MtrunA17_Chr4g0004071 23.026 304 209 11 60 351 9 299 4.28e-15 75.1
Msa1235040 MtrunA17_Chr2g0311621 38.776 98 56 2 27 123 21 115 4.35e-15 70.9
Msa1235040 MtrunA17_Chr7g0252371 48.810 84 42 1 177 259 1 84 5.33e-15 70.5
Msa1235040 MtrunA17_Chr8g0375661 33.333 114 74 2 60 172 52 164 4.47e-14 69.7
Msa1235040 MtrunA17_Chr8g0375641 34.211 114 73 2 60 172 52 164 1.15e-13 68.9
Msa1235040 MtrunA17_Chr3g0138351 22.039 304 211 9 60 347 7 300 2.95e-13 69.7
Msa1235040 MtrunA17_Chr8g0375591 36.250 80 49 1 53 130 37 116 1.46e-12 64.3
Msa1235040 MtrunA17_Chr1g0148781 22.667 300 204 8 64 347 17 304 9.78e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1235040 AT1G06620.1 60.745 349 133 2 19 364 18 365 1.05e-162 460
Msa1235040 AT1G06650.2 59.551 356 137 3 16 364 14 369 2.46e-160 454
Msa1235040 AT5G59540.1 59.040 354 138 4 17 364 14 366 2.78e-160 454
Msa1235040 AT1G06640.1 59.409 372 137 6 4 364 1 369 1.78e-158 449
Msa1235040 AT5G59530.1 59.155 355 135 6 17 364 13 364 7.12e-156 442
Msa1235040 AT1G04350.1 56.863 357 144 4 14 364 8 360 4.88e-152 432
Msa1235040 AT1G06645.1 57.534 365 140 5 9 364 21 379 3.13e-149 426
Msa1235040 AT2G30840.1 56.901 355 146 4 16 364 9 362 1.59e-145 416
Msa1235040 AT1G04380.1 54.571 350 141 3 16 364 13 345 8.80e-145 414
Msa1235040 AT5G43440.1 53.782 357 156 3 15 364 11 365 5.25e-144 412
Msa1235040 AT5G43450.1 53.652 356 155 3 15 364 11 362 4.03e-142 407
Msa1235040 AT1G03410.2 52.528 356 160 5 16 364 8 361 7.04e-140 402
Msa1235040 AT2G30830.1 54.286 350 157 3 17 364 10 358 2.96e-139 400
Msa1235040 AT2G30840.3 55.775 355 144 5 16 364 9 356 3.36e-139 400
Msa1235040 AT1G03410.1 52.528 356 160 5 16 364 45 398 3.56e-139 401
Msa1235040 AT3G61400.1 50.135 371 174 6 4 364 1 370 1.00e-134 389
Msa1235040 AT2G25450.1 53.541 353 158 5 16 364 9 359 3.65e-133 385
Msa1235040 AT1G03400.1 51.412 354 157 5 16 364 8 351 2.81e-131 380
Msa1235040 AT1G03400.2 47.644 382 157 6 16 364 8 379 1.27e-124 363
Msa1235040 AT1G06620.2 59.774 266 103 2 19 281 18 282 1.96e-119 347
Msa1235040 AT5G59540.2 58.088 272 107 4 17 282 14 284 4.50e-119 346
Msa1235040 AT1G06640.2 57.288 295 113 5 4 288 1 292 8.94e-119 347
Msa1235040 AT1G06640.3 58.131 289 108 5 4 282 1 286 1.42e-117 342
Msa1235040 AT1G06650.1 57.875 273 109 2 16 282 14 286 2.30e-116 340
Msa1235040 AT2G30840.2 56.827 271 112 2 16 281 9 279 2.11e-112 330
Msa1235040 AT5G43440.2 54.380 274 116 3 15 281 11 282 8.25e-111 325
Msa1235040 AT5G43450.2 53.214 280 121 3 15 288 11 286 1.68e-109 322
Msa1235040 AT1G04380.2 52.239 268 110 3 16 282 13 263 2.61e-103 305
Msa1235040 AT3G61400.2 48.958 288 138 4 4 282 1 288 6.63e-101 300
Msa1235040 AT3G13610.1 34.844 353 198 10 27 364 26 361 5.15e-64 208
Msa1235040 AT1G55290.1 34.375 352 202 9 27 364 25 361 1.69e-63 207
Msa1235040 AT3G12900.1 36.499 337 206 6 27 360 21 352 3.81e-63 206
Msa1235040 AT4G10500.1 34.177 316 198 4 52 363 36 345 3.15e-62 203
Msa1235040 AT4G10490.1 33.141 347 203 7 36 363 8 344 7.07e-62 202
Msa1235040 AT2G36690.2 32.955 352 218 6 25 364 18 363 1.48e-58 194
Msa1235040 AT2G36690.1 32.955 352 218 6 25 364 18 363 1.48e-58 194
Msa1235040 AT5G24530.1 32.248 307 198 3 60 362 38 338 3.60e-57 189
Msa1235040 AT2G38240.1 33.239 352 214 7 21 360 5 347 3.91e-57 190
Msa1235040 AT5G05600.1 31.081 370 232 8 4 362 10 367 1.11e-56 189
Msa1235040 AT3G55970.1 32.059 340 212 8 28 352 14 349 8.48e-54 181
Msa1235040 AT3G11180.1 30.343 379 236 8 1 362 29 396 9.13e-54 182
Msa1235040 AT3G11180.2 30.079 379 237 8 1 362 29 396 1.73e-53 182
Msa1235040 AT1G17020.1 32.698 315 193 9 60 364 53 358 1.72e-50 172
Msa1235040 AT4G25300.1 33.013 312 195 8 60 364 52 356 5.58e-50 171
Msa1235040 AT3G19010.1 33.444 302 174 6 55 337 23 316 3.78e-48 166
Msa1235040 AT3G19010.4 33.444 302 174 6 55 337 23 316 3.78e-48 166
Msa1235040 AT4G25310.1 32.765 293 180 8 80 364 70 353 4.53e-48 166
Msa1235040 AT3G19000.1 34.211 304 174 7 60 344 32 328 4.71e-48 166
Msa1235040 AT4G22880.1 30.205 341 210 8 28 347 7 340 1.64e-47 165
Msa1235040 AT4G22880.2 30.205 341 210 8 28 347 7 340 1.64e-47 165
Msa1235040 AT4G22880.3 30.205 341 210 8 28 347 7 340 1.64e-47 165
Msa1235040 AT3G21420.1 29.692 357 220 8 28 364 17 362 1.38e-44 157
Msa1235040 AT1G17010.1 29.851 335 218 8 40 364 31 358 1.59e-44 157
Msa1235040 AT1G78550.1 29.874 318 208 7 54 364 47 356 6.05e-44 155
Msa1235040 AT4G16330.2 30.744 309 191 6 60 360 67 360 6.72e-44 155
Msa1235040 AT1G77330.1 31.879 298 179 7 59 345 2 286 7.41e-44 154
Msa1235040 AT2G44800.1 29.882 338 223 6 21 350 9 340 3.17e-43 154
Msa1235040 AT3G51240.1 32.550 298 181 7 34 318 10 300 8.94e-42 150
Msa1235040 AT4G21200.1 31.179 263 165 4 60 316 42 294 1.30e-41 149
Msa1235040 AT5G08640.2 30.872 298 180 8 59 344 42 325 1.62e-41 149
Msa1235040 AT5G08640.1 30.872 298 180 8 59 344 42 325 1.62e-41 149
Msa1235040 AT3G60290.1 31.741 293 190 5 60 348 52 338 3.98e-41 148
Msa1235040 AT3G19010.3 31.731 312 177 10 36 337 1 286 4.81e-41 147
Msa1235040 AT5G05600.2 30.690 290 181 7 4 282 10 290 2.74e-40 144
Msa1235040 AT5G12270.1 29.213 356 222 12 25 364 18 359 3.37e-40 145
Msa1235040 AT1G12010.1 30.565 301 177 10 60 348 7 287 7.04e-40 144
Msa1235040 AT1G62380.1 31.228 285 166 8 60 332 7 273 5.81e-39 141
Msa1235040 AT1G05010.1 33.962 265 147 10 60 311 4 253 6.42e-39 141
Msa1235040 AT4G25420.1 29.375 320 210 4 39 347 40 354 1.38e-38 142
Msa1235040 AT1G15550.1 29.938 324 180 11 56 359 53 349 8.22e-38 139
Msa1235040 AT3G19000.2 33.200 250 144 6 60 290 32 277 8.77e-38 137
Msa1235040 AT1G78550.2 29.286 280 185 6 92 364 5 278 1.04e-37 137
Msa1235040 AT3G55970.2 31.481 270 169 7 28 282 14 282 1.27e-37 137
Msa1235040 AT5G20400.1 30.030 333 215 9 28 349 9 334 1.41e-36 135
Msa1235040 AT5G07480.1 28.115 313 208 8 47 348 31 337 1.09e-35 133
Msa1235040 AT1G60980.1 28.896 308 196 7 60 350 57 358 3.28e-35 132
Msa1235040 AT1G80330.1 30.164 305 175 10 60 345 49 334 5.70e-35 131
Msa1235040 AT3G19010.2 30.515 272 162 6 36 285 1 267 1.38e-34 129
Msa1235040 AT4G25310.2 28.425 292 166 8 80 364 70 325 2.29e-34 129
Msa1235040 AT4G16330.1 32.870 216 134 3 149 360 46 254 3.36e-34 127
Msa1235040 AT5G07200.1 28.754 313 198 7 15 309 13 318 7.69e-34 129
Msa1235040 AT1G50960.1 27.653 311 196 7 47 344 20 314 5.01e-33 126
Msa1235040 AT5G63590.1 30.717 293 186 6 60 344 14 297 5.84e-33 125
Msa1235040 AT2G19590.1 31.615 291 163 12 60 337 11 278 2.77e-32 123
Msa1235040 AT1G80340.1 28.267 329 197 8 40 346 21 332 4.55e-32 124
Msa1235040 AT4G25300.2 34.197 193 122 3 174 364 73 262 7.57e-32 121
Msa1235040 AT5G20550.1 29.730 333 208 11 28 345 9 330 1.14e-31 122
Msa1235040 AT5G51810.1 28.428 299 194 5 60 347 63 352 2.09e-31 122
Msa1235040 AT5G63600.1 28.716 296 183 9 60 345 33 310 2.58e-31 121
Msa1235040 AT4G21690.1 29.968 317 179 13 52 346 39 334 7.89e-31 120
Msa1235040 AT5G63600.2 28.620 297 183 10 60 345 33 311 4.60e-30 117
Msa1235040 AT4G25420.2 31.076 251 160 3 39 278 40 288 7.73e-30 116
Msa1235040 AT1G49390.1 28.049 328 219 9 28 345 9 329 8.03e-30 117
Msa1235040 AT3G51240.2 36.943 157 93 2 163 317 63 215 3.03e-29 114
Msa1235040 AT5G54000.2 26.786 336 226 9 28 349 9 338 4.48e-29 115
Msa1235040 AT5G63595.1 27.273 264 143 7 56 305 21 249 1.73e-27 109
Msa1235040 AT1G44090.1 29.779 272 159 8 60 311 63 322 2.23e-27 111
Msa1235040 AT1G30040.1 28.383 303 186 8 56 344 27 312 3.16e-27 110
Msa1235040 AT3G47190.1 26.482 253 155 6 60 295 32 270 1.38e-26 108
Msa1235040 AT5G58660.1 26.298 289 155 8 60 310 34 302 1.96e-26 108
Msa1235040 AT1G78440.1 29.085 306 177 10 59 344 17 302 2.28e-26 107
Msa1235040 AT5G51810.2 29.958 237 149 4 60 285 63 293 7.04e-26 105
Msa1235040 AT1G47990.1 29.054 296 177 9 60 339 15 293 1.70e-25 105
Msa1235040 AT5G43935.1 26.246 301 171 10 60 345 19 283 1.99e-25 104
Msa1235040 AT2G34555.1 28.477 302 180 10 59 344 26 307 2.04e-24 102
Msa1235040 AT5G54000.1 27.099 262 179 6 96 349 1 258 2.41e-24 100
Msa1235040 AT4G23340.1 28.470 281 181 9 86 355 30 301 3.36e-24 101
Msa1235040 AT2G19590.2 30.769 234 135 8 93 313 26 245 7.37e-24 100
Msa1235040 AT5G63580.2 27.897 233 153 6 57 282 16 240 1.62e-23 98.2
Msa1235040 AT5G63580.1 28.139 231 151 6 57 280 16 238 2.24e-23 97.8
Msa1235040 AT1G14130.1 26.936 297 177 12 59 340 8 279 6.99e-23 97.8
Msa1235040 AT1G49390.2 28.125 256 172 6 96 345 1 250 8.83e-23 96.7
Msa1235040 AT1G14120.2 28.302 265 157 9 59 310 7 251 1.21e-22 97.1
Msa1235040 AT1G14120.1 28.302 265 157 9 59 310 7 251 1.21e-22 97.1
Msa1235040 AT1G14120.3 28.302 265 157 9 59 310 7 251 1.21e-22 97.1
Msa1235040 AT5G51310.1 25.962 312 190 9 60 347 5 299 2.09e-22 96.7
Msa1235040 AT5G07480.2 28.814 236 141 9 120 348 13 228 4.64e-22 94.4
Msa1235040 AT3G49620.1 28.135 327 192 14 51 347 25 338 1.45e-20 92.0
Msa1235040 AT5G58660.2 25.287 261 137 8 60 282 34 274 2.70e-20 90.1
Msa1235040 AT2G06960.1 37.778 135 67 3 217 351 28 145 7.22e-20 85.5
Msa1235040 AT3G50210.4 26.389 288 177 11 60 316 8 291 1.16e-18 86.3
Msa1235040 AT3G50210.1 26.389 288 177 11 60 316 8 291 1.16e-18 86.3
Msa1235040 AT3G50210.3 26.389 288 177 11 60 316 8 291 1.16e-18 86.3
Msa1235040 AT3G49630.1 26.174 298 194 9 53 326 2 297 1.43e-18 85.9
Msa1235040 AT1G02400.1 27.152 302 187 12 60 344 24 309 1.50e-18 85.9
Msa1235040 AT3G46490.1 25.949 316 197 10 59 346 11 317 6.21e-18 84.0
Msa1235040 AT3G46500.5 24.920 313 199 9 57 345 9 309 1.11e-17 83.2
Msa1235040 AT3G49630.3 26.415 265 176 7 79 326 31 293 2.48e-17 82.4
Msa1235040 AT1G30040.2 26.556 241 149 7 56 282 27 253 3.02e-17 81.3
Msa1235040 AT4G23340.2 30.270 185 117 7 179 355 3 183 1.03e-16 78.6
Msa1235040 AT3G46490.2 26.866 268 163 8 59 298 11 273 1.41e-16 80.1
Msa1235040 AT4G16765.6 30.220 182 112 6 174 345 60 236 6.67e-15 73.9
Msa1235040 AT4G16765.1 30.220 182 112 6 174 345 60 236 6.67e-15 73.9
Msa1235040 AT4G16765.2 30.220 182 112 6 174 345 60 236 6.67e-15 73.9
Msa1235040 AT3G46500.7 25.000 264 166 7 59 298 11 266 1.20e-14 74.3
Msa1235040 AT4G16765.3 31.214 173 104 6 174 336 60 227 3.47e-14 71.6
Msa1235040 AT4G16765.5 35.537 121 67 4 231 345 75 190 1.03e-13 69.7
Msa1235040 AT1G35190.1 25.000 272 171 9 54 298 3 268 1.18e-13 71.6
Msa1235040 AT3G50210.2 28.571 161 104 5 163 316 53 209 3.52e-13 69.3
Msa1235040 AT3G46500.4 34.328 134 79 3 218 346 45 174 7.16e-13 67.0
Msa1235040 AT4G22870.1 30.928 97 65 1 251 347 2 96 8.56e-13 64.7
Msa1235040 AT3G46500.10 33.577 137 82 3 215 346 104 236 1.45e-12 67.4
Msa1235040 AT3G46500.1 33.577 137 82 3 215 346 104 236 1.45e-12 67.4
Msa1235040 AT3G49630.2 26.875 160 109 5 163 319 63 217 2.72e-12 66.6

Find 101 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACTAGTTTCTCTGTATT+TGG 0.065835 8_2:-12856678 None:intergenic
CTTTATTATCAATATCTTTA+AGG 0.122806 8_2:-12855286 None:intergenic
GTTACAGATAGAACAATTAT+TGG 0.207697 8_2:-12854916 None:intergenic
GTTGTTCCCACAGTCAATTC+TGG 0.240799 8_2:-12856106 None:intergenic
AGACTGATGCATCCATTTAA+AGG 0.251463 8_2:+12854947 Msa1235040:five_prime_UTR
AAGTTCTTTATGAAGATAAA+TGG 0.252533 8_2:+12856188 Msa1235040:CDS
AGAGATGTAATACTAGAATA+TGG 0.271881 8_2:+12855944 Msa1235040:intron
TTCCATAATAATTCAGAGTT+TGG 0.283646 8_2:+12856988 Msa1235040:three_prime_UTR
CCTCGTATTTGTCTGGTTGA+TGG 0.287516 8_2:-12855226 None:intergenic
AACCAAACTCTGAATTATTA+TGG 0.301120 8_2:-12856990 None:intergenic
ATCATGGCCGGGACAATTCT+TGG 0.307338 8_2:-12857027 None:intergenic
TGTTTAATGAGTTAGAATTA+AGG 0.319030 8_2:-12854983 None:intergenic
TCCAAACCATCTAAAAGATA+TGG 0.330391 8_2:+12856030 Msa1235040:CDS
TGGAACCTTTCTCTTGAAAC+TGG 0.333157 8_2:-12856970 None:intergenic
CATACTGCGGGAAAATCTTC+TGG 0.333743 8_2:-12855590 None:intergenic
AAAATTGCTATTGTAAATAA+AGG 0.339197 8_2:-12855495 None:intergenic
TGCGGGAAAATCTTCTGGTT+TGG 0.341368 8_2:-12855585 None:intergenic
ACACTAGTTTCTCTGTATTT+GGG 0.354261 8_2:-12856677 None:intergenic
AAACATGCAACAGATATTCT+TGG 0.354935 8_2:-12856581 None:intergenic
GCGGGAAAATCTTCTGGTTT+GGG 0.360800 8_2:-12855584 None:intergenic
GTCCCGGCCATGATTTGAAT+TGG 0.363326 8_2:+12857036 Msa1235040:three_prime_UTR
GTTAGGTTTGGTTGTATCAA+TGG 0.379115 8_2:-12855102 None:intergenic
CCCACAGTCAATTCTGGTTC+AGG 0.384551 8_2:-12856100 None:intergenic
AAAGCATCCACAAAGCTCTA+TGG 0.394492 8_2:+12856620 Msa1235040:CDS
ACAGATATTCTTGGACCAAC+TGG 0.395776 8_2:-12856572 None:intergenic
AAAGATATGGATTGTGCTAA+AGG 0.404578 8_2:+12856043 Msa1235040:CDS
ATTGATATAACACCTGTTCC+TGG 0.407869 8_2:+12856211 Msa1235040:CDS
GACTGATGCATCCATTTAAA+GGG 0.408140 8_2:+12854948 Msa1235040:five_prime_UTR
TTGGCTTCCTCGTATTTGTC+TGG 0.410058 8_2:-12855233 None:intergenic
ATAGATCTCCAGCACTCAAT+TGG 0.410574 8_2:+12855525 Msa1235040:CDS
TCTTCTGGTTTGGGAGGATC+AGG 0.413561 8_2:-12855575 None:intergenic
TCTGATAATAATTCCTTCAT+AGG 0.414561 8_2:-12856644 None:intergenic
GGGAAACAGGTGATGAATCT+TGG 0.416565 8_2:+12855965 Msa1235040:CDS
ACAATTCCTTGATGAATACT+TGG 0.419418 8_2:-12855311 None:intergenic
AATACTAGAATATGGGAAAC+AGG 0.420325 8_2:+12855952 Msa1235040:CDS
ACCCTCCAGTTTCAAGAGAA+AGG 0.423779 8_2:+12856965 Msa1235040:three_prime_UTR
ATTTATCTTCATAAAGAACT+TGG 0.428540 8_2:-12856186 None:intergenic
TCAAGGAAGCATGTGAAACT+TGG 0.431792 8_2:+12855342 Msa1235040:CDS
TTGAATGTGGAATCAAGGTT+AGG 0.444552 8_2:-12855119 None:intergenic
TTTCGAGCAAAAGGACTAGA+TGG 0.446957 8_2:+12856719 Msa1235040:CDS
GTGGCCTACTTTCGAGCAAA+AGG 0.449952 8_2:+12856710 Msa1235040:CDS
GAATTGATGTCAGAAGCATT+AGG 0.450460 8_2:+12856001 Msa1235040:CDS
ATTGACAAATCTTTGTGAGT+TGG 0.460563 8_2:+12856814 Msa1235040:three_prime_UTR
GTTCTTGAGGAGGTGAAAGA+TGG 0.464397 8_2:+12855404 Msa1235040:CDS
GTTCATTGAATGTGGAATCA+AGG 0.469424 8_2:-12855124 None:intergenic
ACTATGAGAGCTCCAGGAAC+AGG 0.475780 8_2:-12856223 None:intergenic
GAACTTGGAGACCACCAATA+TGG 0.476488 8_2:-12856171 None:intergenic
TTCTACTCATTCAAGAAGCA+TGG 0.481021 8_2:+12855076 Msa1235040:exon
CATAGGTCCATAGAGCTTTG+TGG 0.481946 8_2:-12856627 None:intergenic
GTGCTTCTACAAGACCATAT+TGG 0.485099 8_2:+12856157 Msa1235040:CDS
AATAACATGACTTGTGTTGT+TGG 0.488088 8_2:-12855252 None:intergenic
GAGATGTAATACTAGAATAT+GGG 0.488938 8_2:+12855945 Msa1235040:intron
TGTGGAATCAAGGTTAGGTT+TGG 0.492547 8_2:-12855114 None:intergenic
CCCTTTGAGTGTTCTTGAGG+AGG 0.493576 8_2:+12855394 Msa1235040:CDS
CAAGGAAGCATGTGAAACTT+GGG 0.494320 8_2:+12855343 Msa1235040:CDS
TATTCTTGGACCAACTGGAT+TGG 0.506243 8_2:-12856567 None:intergenic
TGTGGATGCTTTAAGTGCTG+TGG 0.507933 8_2:-12856609 None:intergenic
GAGATCTCCAATTCAAATCA+TGG 0.508004 8_2:-12857043 None:intergenic
CTATCCCTCCAATTGAGTGC+TGG 0.521685 8_2:-12855533 None:intergenic
AAAGCTCTATGGACCTATGA+AGG 0.525118 8_2:+12856631 Msa1235040:CDS
ACCTTTCTCTTGAAACTGGA+GGG 0.529778 8_2:-12856966 None:intergenic
AGGAATTGTTGACGATATCA+AGG 0.530296 8_2:+12855325 Msa1235040:CDS
GATCTCCAGCACTCAATTGG+AGG 0.532197 8_2:+12855528 Msa1235040:CDS
GAAACAAAAGCAGGTGTGAA+AGG 0.532657 8_2:+12855161 Msa1235040:CDS
ACATTAACTATGAGAGCTCC+AGG 0.533138 8_2:-12856229 None:intergenic
TCTCCAATTCAAATCATGGC+CGG 0.536235 8_2:-12857039 None:intergenic
CTCCAATTCAAATCATGGCC+GGG 0.536393 8_2:-12857038 None:intergenic
TGCTTTGCGTTCATTGAATG+TGG 0.544374 8_2:-12855132 None:intergenic
AACCTTTCTCTTGAAACTGG+AGG 0.545539 8_2:-12856967 None:intergenic
TCTACTCATTCAAGAAGCAT+GGG 0.545841 8_2:+12855077 Msa1235040:exon
AATCCCTTTGAGTGTTCTTG+AGG 0.545874 8_2:+12855391 Msa1235040:CDS
ACCTCCTCAAGAACACTCAA+AGG 0.547379 8_2:-12855395 None:intergenic
CCTCCTCAAGAACACTCAAA+GGG 0.551009 8_2:-12855394 None:intergenic
TTGGTATATGAACAAATATG+TGG 0.557095 8_2:-12855013 None:intergenic
AGGTGAAAGATGGAGTGAAG+AGG 0.558342 8_2:+12855414 Msa1235040:CDS
AACTAGTGTTGCTGATTATG+TGG 0.561302 8_2:+12856691 Msa1235040:CDS
CGTATTTGTCTGGTTGATGG+TGG 0.562970 8_2:-12855223 None:intergenic
CAATTCCTTGATGAATACTT+GGG 0.576394 8_2:-12855310 None:intergenic
ATCTCCAGCACTCAATTGGA+GGG 0.578171 8_2:+12855529 Msa1235040:CDS
CAAACATACCTGCATACTGC+GGG 0.579759 8_2:-12855602 None:intergenic
CTAGTTTCTCTGTATTTGGG+AGG 0.580147 8_2:-12856674 None:intergenic
AGTATAACCAAGAATTGTCC+CGG 0.583978 8_2:+12857020 Msa1235040:three_prime_UTR
CAGGACAAGAAGGATAGTAA+TGG 0.586186 8_2:-12856081 None:intergenic
AATTCTGGTTCAGGACAAGA+AGG 0.588777 8_2:-12856091 None:intergenic
ATATCTTTAAGGTCGATGAC+AGG 0.590653 8_2:-12855275 None:intergenic
GTGAAAGGACTTGTTGATGC+AGG 0.590786 8_2:+12855176 Msa1235040:CDS
GCATTTGATGAAACAAAAGC+AGG 0.595830 8_2:+12855152 Msa1235040:CDS
AAAGACCCAAGTATTCATCA+AGG 0.600194 8_2:+12855305 Msa1235040:CDS
GGAGCTCTCATAGTTAATGT+TGG 0.602821 8_2:+12856232 Msa1235040:CDS
GATTTCATATCACAATCAAG+TGG 0.605803 8_2:-12856848 None:intergenic
GGAAAATCTTCTGGTTTGGG+AGG 0.607287 8_2:-12855581 None:intergenic
GGTTGATGGTGGAATAAGCT+TGG 0.607514 8_2:-12855212 None:intergenic
AGAGTACTTGCCAATCCAGT+TGG 0.615075 8_2:+12856557 Msa1235040:CDS
AAGGAAGCATGTGAAACTTG+GGG 0.628246 8_2:+12855344 Msa1235040:CDS
CTTCTACAAGACCATATTGG+TGG 0.634375 8_2:+12856160 Msa1235040:CDS
ATGAAATCATAAACATGATG+TGG 0.648022 8_2:+12856863 Msa1235040:three_prime_UTR
AAAATTTGAACTAAGCAATG+TGG 0.664782 8_2:+12856764 Msa1235040:exon
ACAAACATACCTGCATACTG+CGG 0.682866 8_2:-12855603 None:intergenic
TCCTGAACCAGAATTGACTG+TGG 0.682984 8_2:+12856099 Msa1235040:CDS
CCTGAACCAGAATTGACTGT+GGG 0.714206 8_2:+12856100 Msa1235040:CDS
CCATCAACCAGACAAATACG+AGG 0.724113 8_2:+12855226 Msa1235040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATAAAACAAATAAATATT+AGG + chr8_2:12855817-12855836 Msa1235040:intron 10.0%
!! TCATAAAACAAATAAATATT+AGG + chr8_2:12855817-12855836 Msa1235040:intron 10.0%
!! CTTTATTATCAATATCTTTA+AGG - chr8_2:12855289-12855308 None:intergenic 15.0%
!!! AAAATTGCTATTGTAAATAA+AGG - chr8_2:12855498-12855517 None:intergenic 15.0%
!! TTTGAAGATATTAAATATGA+AGG + chr8_2:12856446-12856465 Msa1235040:intron 15.0%
!! CTTTATTATCAATATCTTTA+AGG - chr8_2:12855289-12855308 None:intergenic 15.0%
!!! AAAATTGCTATTGTAAATAA+AGG - chr8_2:12855498-12855517 None:intergenic 15.0%
!! TTTGAAGATATTAAATATGA+AGG + chr8_2:12856446-12856465 Msa1235040:intron 15.0%
!! TGTTTAATGAGTTAGAATTA+AGG - chr8_2:12854986-12855005 None:intergenic 20.0%
!!! TTTTTTCAAGTTGTTAATCA+TGG + chr8_2:12855368-12855387 Msa1235040:CDS 20.0%
!!! GTTTTATATTTTGTATCAGT+TGG - chr8_2:12855857-12855876 None:intergenic 20.0%
!! GTAAGGATTAAATTCAATTT+CGG - chr8_2:12855882-12855901 None:intergenic 20.0%
!! ATTTATCTTCATAAAGAACT+TGG - chr8_2:12856189-12856208 None:intergenic 20.0%
!! AAGTTCTTTATGAAGATAAA+TGG + chr8_2:12856188-12856207 Msa1235040:CDS 20.0%
!!! CATTATTGAATCTAAGATAA+AGG + chr8_2:12856396-12856415 Msa1235040:intron 20.0%
!! AAGATATTAAATATGAAGGA+TGG + chr8_2:12856450-12856469 Msa1235040:intron 20.0%
!! TGTTTAATGAGTTAGAATTA+AGG - chr8_2:12854986-12855005 None:intergenic 20.0%
!!! TTTTTTCAAGTTGTTAATCA+TGG + chr8_2:12855368-12855387 Msa1235040:CDS 20.0%
!!! GTTTTATATTTTGTATCAGT+TGG - chr8_2:12855857-12855876 None:intergenic 20.0%
!! GTAAGGATTAAATTCAATTT+CGG - chr8_2:12855882-12855901 None:intergenic 20.0%
!! ATTTATCTTCATAAAGAACT+TGG - chr8_2:12856189-12856208 None:intergenic 20.0%
!! AAGTTCTTTATGAAGATAAA+TGG + chr8_2:12856188-12856207 Msa1235040:CDS 20.0%
!!! CATTATTGAATCTAAGATAA+AGG + chr8_2:12856396-12856415 Msa1235040:intron 20.0%
!! AAGATATTAAATATGAAGGA+TGG + chr8_2:12856450-12856469 Msa1235040:intron 20.0%
! GTTACAGATAGAACAATTAT+TGG - chr8_2:12854919-12854938 None:intergenic 25.0%
! AAAAACTTAGACCCTTTAAA+TGG - chr8_2:12854962-12854981 None:intergenic 25.0%
! TTGGTATATGAACAAATATG+TGG - chr8_2:12855016-12855035 None:intergenic 25.0%
!!! CACTTTAAGATGTGAAATTA+TGG + chr8_2:12855714-12855733 Msa1235040:intron 25.0%
! ATCTTATAAATAGATCTTCC+AGG - chr8_2:12855792-12855811 None:intergenic 25.0%
! GCAACAAAAAAAAAACAGTA+AGG - chr8_2:12855899-12855918 None:intergenic 25.0%
! AGAGATGTAATACTAGAATA+TGG + chr8_2:12855944-12855963 Msa1235040:intron 25.0%
! GAGATGTAATACTAGAATAT+GGG + chr8_2:12855945-12855964 Msa1235040:intron 25.0%
! AGTGCATTACTAATAGTTTA+AGG - chr8_2:12856302-12856321 None:intergenic 25.0%
!!! AAATATGAAGGATGGATTAT+AGG + chr8_2:12856458-12856477 Msa1235040:intron 25.0%
! TCTGATAATAATTCCTTCAT+AGG - chr8_2:12856647-12856666 None:intergenic 25.0%
! AAAATTTGAACTAAGCAATG+TGG + chr8_2:12856764-12856783 Msa1235040:exon 25.0%
! ATGAAATCATAAACATGATG+TGG + chr8_2:12856863-12856882 Msa1235040:three_prime_UTR 25.0%
! TTCCATAATAATTCAGAGTT+TGG + chr8_2:12856988-12857007 Msa1235040:three_prime_UTR 25.0%
! AACCAAACTCTGAATTATTA+TGG - chr8_2:12856993-12857012 None:intergenic 25.0%
! GTTACAGATAGAACAATTAT+TGG - chr8_2:12854919-12854938 None:intergenic 25.0%
! AAAAACTTAGACCCTTTAAA+TGG - chr8_2:12854962-12854981 None:intergenic 25.0%
! TTGGTATATGAACAAATATG+TGG - chr8_2:12855016-12855035 None:intergenic 25.0%
!!! CACTTTAAGATGTGAAATTA+TGG + chr8_2:12855714-12855733 Msa1235040:intron 25.0%
! ATCTTATAAATAGATCTTCC+AGG - chr8_2:12855792-12855811 None:intergenic 25.0%
! GCAACAAAAAAAAAACAGTA+AGG - chr8_2:12855899-12855918 None:intergenic 25.0%
! AGAGATGTAATACTAGAATA+TGG + chr8_2:12855944-12855963 Msa1235040:intron 25.0%
! GAGATGTAATACTAGAATAT+GGG + chr8_2:12855945-12855964 Msa1235040:intron 25.0%
! AGTGCATTACTAATAGTTTA+AGG - chr8_2:12856302-12856321 None:intergenic 25.0%
!!! AAATATGAAGGATGGATTAT+AGG + chr8_2:12856458-12856477 Msa1235040:intron 25.0%
! TCTGATAATAATTCCTTCAT+AGG - chr8_2:12856647-12856666 None:intergenic 25.0%
! AAAATTTGAACTAAGCAATG+TGG + chr8_2:12856764-12856783 Msa1235040:exon 25.0%
! ATGAAATCATAAACATGATG+TGG + chr8_2:12856863-12856882 Msa1235040:three_prime_UTR 25.0%
! TTCCATAATAATTCAGAGTT+TGG + chr8_2:12856988-12857007 Msa1235040:three_prime_UTR 25.0%
! AACCAAACTCTGAATTATTA+TGG - chr8_2:12856993-12857012 None:intergenic 25.0%
CACTAAAAAGACAAAGAGTT+TGG - chr8_2:12855035-12855054 None:intergenic 30.0%
! AATAACATGACTTGTGTTGT+TGG - chr8_2:12855255-12855274 None:intergenic 30.0%
CAATTCCTTGATGAATACTT+GGG - chr8_2:12855313-12855332 None:intergenic 30.0%
ACAATTCCTTGATGAATACT+TGG - chr8_2:12855314-12855333 None:intergenic 30.0%
!!! GGATAGTTTTAGTTGTTACT+TGG + chr8_2:12855550-12855569 Msa1235040:CDS 30.0%
GCATGTGTGTAAAATTTATG+CGG + chr8_2:12855628-12855647 Msa1235040:intron 30.0%
TATGGATATTGCAACATGTA+GGG + chr8_2:12855659-12855678 Msa1235040:intron 30.0%
CACATCTTAAAGTGAATAAG+TGG - chr8_2:12855708-12855727 None:intergenic 30.0%
AATACTAGAATATGGGAAAC+AGG + chr8_2:12855952-12855971 Msa1235040:CDS 30.0%
TCCAAACCATCTAAAAGATA+TGG + chr8_2:12856030-12856049 Msa1235040:CDS 30.0%
! TCCATATCTTTTAGATGGTT+TGG - chr8_2:12856034-12856053 None:intergenic 30.0%
! CACAATCCATATCTTTTAGA+TGG - chr8_2:12856039-12856058 None:intergenic 30.0%
! AAAGATATGGATTGTGCTAA+AGG + chr8_2:12856043-12856062 Msa1235040:CDS 30.0%
ACTTATTGAGCAATCAGAAT+CGG + chr8_2:12856363-12856382 Msa1235040:intron 30.0%
AAACATGCAACAGATATTCT+TGG - chr8_2:12856584-12856603 None:intergenic 30.0%
! ACACTAGTTTCTCTGTATTT+GGG - chr8_2:12856680-12856699 None:intergenic 30.0%
! AACACTAGTTTCTCTGTATT+TGG - chr8_2:12856681-12856700 None:intergenic 30.0%
ATTGACAAATCTTTGTGAGT+TGG + chr8_2:12856814-12856833 Msa1235040:three_prime_UTR 30.0%
GATTTCATATCACAATCAAG+TGG - chr8_2:12856851-12856870 None:intergenic 30.0%
!! GTGGTTTTTATTTCATGCAA+TGG + chr8_2:12856882-12856901 Msa1235040:three_prime_UTR 30.0%
CACTAAAAAGACAAAGAGTT+TGG - chr8_2:12855035-12855054 None:intergenic 30.0%
! AATAACATGACTTGTGTTGT+TGG - chr8_2:12855255-12855274 None:intergenic 30.0%
CAATTCCTTGATGAATACTT+GGG - chr8_2:12855313-12855332 None:intergenic 30.0%
ACAATTCCTTGATGAATACT+TGG - chr8_2:12855314-12855333 None:intergenic 30.0%
!!! GGATAGTTTTAGTTGTTACT+TGG + chr8_2:12855550-12855569 Msa1235040:CDS 30.0%
GCATGTGTGTAAAATTTATG+CGG + chr8_2:12855628-12855647 Msa1235040:intron 30.0%
TATGGATATTGCAACATGTA+GGG + chr8_2:12855659-12855678 Msa1235040:intron 30.0%
CACATCTTAAAGTGAATAAG+TGG - chr8_2:12855708-12855727 None:intergenic 30.0%
AATACTAGAATATGGGAAAC+AGG + chr8_2:12855952-12855971 Msa1235040:CDS 30.0%
TCCAAACCATCTAAAAGATA+TGG + chr8_2:12856030-12856049 Msa1235040:CDS 30.0%
! TCCATATCTTTTAGATGGTT+TGG - chr8_2:12856034-12856053 None:intergenic 30.0%
! CACAATCCATATCTTTTAGA+TGG - chr8_2:12856039-12856058 None:intergenic 30.0%
! AAAGATATGGATTGTGCTAA+AGG + chr8_2:12856043-12856062 Msa1235040:CDS 30.0%
ACTTATTGAGCAATCAGAAT+CGG + chr8_2:12856363-12856382 Msa1235040:intron 30.0%
AAACATGCAACAGATATTCT+TGG - chr8_2:12856584-12856603 None:intergenic 30.0%
! ACACTAGTTTCTCTGTATTT+GGG - chr8_2:12856680-12856699 None:intergenic 30.0%
! AACACTAGTTTCTCTGTATT+TGG - chr8_2:12856681-12856700 None:intergenic 30.0%
ATTGACAAATCTTTGTGAGT+TGG + chr8_2:12856814-12856833 Msa1235040:three_prime_UTR 30.0%
GATTTCATATCACAATCAAG+TGG - chr8_2:12856851-12856870 None:intergenic 30.0%
!! GTGGTTTTTATTTCATGCAA+TGG + chr8_2:12856882-12856901 Msa1235040:three_prime_UTR 30.0%
AGACTGATGCATCCATTTAA+AGG + chr8_2:12854947-12854966 Msa1235040:five_prime_UTR 35.0%
GACTGATGCATCCATTTAAA+GGG + chr8_2:12854948-12854967 Msa1235040:five_prime_UTR 35.0%
TTCTACTCATTCAAGAAGCA+TGG + chr8_2:12855076-12855095 Msa1235040:exon 35.0%
! TCTACTCATTCAAGAAGCAT+GGG + chr8_2:12855077-12855096 Msa1235040:exon 35.0%
! GTTAGGTTTGGTTGTATCAA+TGG - chr8_2:12855105-12855124 None:intergenic 35.0%
TTGAATGTGGAATCAAGGTT+AGG - chr8_2:12855122-12855141 None:intergenic 35.0%
GTTCATTGAATGTGGAATCA+AGG - chr8_2:12855127-12855146 None:intergenic 35.0%
GCATTTGATGAAACAAAAGC+AGG + chr8_2:12855152-12855171 Msa1235040:CDS 35.0%
!! ATATCTTTAAGGTCGATGAC+AGG - chr8_2:12855278-12855297 None:intergenic 35.0%
AAAGACCCAAGTATTCATCA+AGG + chr8_2:12855305-12855324 Msa1235040:CDS 35.0%
AGGAATTGTTGACGATATCA+AGG + chr8_2:12855325-12855344 Msa1235040:CDS 35.0%
GTAAAATTTATGCGGTCAGT+TGG + chr8_2:12855636-12855655 Msa1235040:intron 35.0%
GTATGGATATTGCAACATGT+AGG + chr8_2:12855658-12855677 Msa1235040:intron 35.0%
AGACTACTTGACTAAGAAGA+AGG + chr8_2:12855742-12855761 Msa1235040:intron 35.0%
! ATGAAACGCATATTTTCTCC+TGG + chr8_2:12855771-12855790 Msa1235040:intron 35.0%
!! GAATTGATGTCAGAAGCATT+AGG + chr8_2:12856001-12856020 Msa1235040:CDS 35.0%
ATTGATATAACACCTGTTCC+TGG + chr8_2:12856211-12856230 Msa1235040:CDS 35.0%
!!! TAATGTTGGTGATCTTTTGC+AGG + chr8_2:12856246-12856265 Msa1235040:CDS 35.0%
GATTCTGATTGCTCAATAAG+TGG - chr8_2:12856364-12856383 None:intergenic 35.0%
! AACTAGTGTTGCTGATTATG+TGG + chr8_2:12856691-12856710 Msa1235040:CDS 35.0%
AGTATAACCAAGAATTGTCC+CGG + chr8_2:12857020-12857039 Msa1235040:three_prime_UTR 35.0%
AGACTGATGCATCCATTTAA+AGG + chr8_2:12854947-12854966 Msa1235040:five_prime_UTR 35.0%
GACTGATGCATCCATTTAAA+GGG + chr8_2:12854948-12854967 Msa1235040:five_prime_UTR 35.0%
TTCTACTCATTCAAGAAGCA+TGG + chr8_2:12855076-12855095 Msa1235040:exon 35.0%
! TCTACTCATTCAAGAAGCAT+GGG + chr8_2:12855077-12855096 Msa1235040:exon 35.0%
! GTTAGGTTTGGTTGTATCAA+TGG - chr8_2:12855105-12855124 None:intergenic 35.0%
TTGAATGTGGAATCAAGGTT+AGG - chr8_2:12855122-12855141 None:intergenic 35.0%
GTTCATTGAATGTGGAATCA+AGG - chr8_2:12855127-12855146 None:intergenic 35.0%
GCATTTGATGAAACAAAAGC+AGG + chr8_2:12855152-12855171 Msa1235040:CDS 35.0%
!! ATATCTTTAAGGTCGATGAC+AGG - chr8_2:12855278-12855297 None:intergenic 35.0%
AAAGACCCAAGTATTCATCA+AGG + chr8_2:12855305-12855324 Msa1235040:CDS 35.0%
AGGAATTGTTGACGATATCA+AGG + chr8_2:12855325-12855344 Msa1235040:CDS 35.0%
GTAAAATTTATGCGGTCAGT+TGG + chr8_2:12855636-12855655 Msa1235040:intron 35.0%
GTATGGATATTGCAACATGT+AGG + chr8_2:12855658-12855677 Msa1235040:intron 35.0%
AGACTACTTGACTAAGAAGA+AGG + chr8_2:12855742-12855761 Msa1235040:intron 35.0%
! ATGAAACGCATATTTTCTCC+TGG + chr8_2:12855771-12855790 Msa1235040:intron 35.0%
!! GAATTGATGTCAGAAGCATT+AGG + chr8_2:12856001-12856020 Msa1235040:CDS 35.0%
ATTGATATAACACCTGTTCC+TGG + chr8_2:12856211-12856230 Msa1235040:CDS 35.0%
!!! TAATGTTGGTGATCTTTTGC+AGG + chr8_2:12856246-12856265 Msa1235040:CDS 35.0%
GATTCTGATTGCTCAATAAG+TGG - chr8_2:12856364-12856383 None:intergenic 35.0%
! AACTAGTGTTGCTGATTATG+TGG + chr8_2:12856691-12856710 Msa1235040:CDS 35.0%
AGTATAACCAAGAATTGTCC+CGG + chr8_2:12857020-12857039 Msa1235040:three_prime_UTR 35.0%
TGTGGAATCAAGGTTAGGTT+TGG - chr8_2:12855117-12855136 None:intergenic 40.0%
TGCTTTGCGTTCATTGAATG+TGG - chr8_2:12855135-12855154 None:intergenic 40.0%
GAAACAAAAGCAGGTGTGAA+AGG + chr8_2:12855161-12855180 Msa1235040:CDS 40.0%
! TCAAGGAAGCATGTGAAACT+TGG + chr8_2:12855342-12855361 Msa1235040:CDS 40.0%
! CAAGGAAGCATGTGAAACTT+GGG + chr8_2:12855343-12855362 Msa1235040:CDS 40.0%
! AAGGAAGCATGTGAAACTTG+GGG + chr8_2:12855344-12855363 Msa1235040:CDS 40.0%
AATCCCTTTGAGTGTTCTTG+AGG + chr8_2:12855391-12855410 Msa1235040:CDS 40.0%
ATAGATCTCCAGCACTCAAT+TGG + chr8_2:12855525-12855544 Msa1235040:CDS 40.0%
ACAAACATACCTGCATACTG+CGG - chr8_2:12855606-12855625 None:intergenic 40.0%
! ATTTATGCGGTCAGTTGGTA+TGG + chr8_2:12855641-12855660 Msa1235040:intron 40.0%
TATTGCAACATGTAGGGTTG+TGG + chr8_2:12855665-12855684 Msa1235040:intron 40.0%
TAGGGTTGTGGTTCAAATCT+GGG + chr8_2:12855677-12855696 Msa1235040:intron 40.0%
CAGGACAAGAAGGATAGTAA+TGG - chr8_2:12856084-12856103 None:intergenic 40.0%
!! AATTCTGGTTCAGGACAAGA+AGG - chr8_2:12856094-12856113 None:intergenic 40.0%
GTGCTTCTACAAGACCATAT+TGG + chr8_2:12856157-12856176 Msa1235040:CDS 40.0%
CTTCTACAAGACCATATTGG+TGG + chr8_2:12856160-12856179 Msa1235040:CDS 40.0%
ACATTAACTATGAGAGCTCC+AGG - chr8_2:12856232-12856251 None:intergenic 40.0%
GGAGCTCTCATAGTTAATGT+TGG + chr8_2:12856232-12856251 Msa1235040:CDS 40.0%
!! GGTCTCATTGATTCGATTGT+TGG + chr8_2:12856417-12856436 Msa1235040:intron 40.0%
!! CATTGATTCGATTGTTGGTC+AGG + chr8_2:12856422-12856441 Msa1235040:intron 40.0%
TATTCTTGGACCAACTGGAT+TGG - chr8_2:12856570-12856589 None:intergenic 40.0%
ACAGATATTCTTGGACCAAC+TGG - chr8_2:12856575-12856594 None:intergenic 40.0%
! AAAGCATCCACAAAGCTCTA+TGG + chr8_2:12856620-12856639 Msa1235040:CDS 40.0%
AAAGCTCTATGGACCTATGA+AGG + chr8_2:12856631-12856650 Msa1235040:CDS 40.0%
CTAGTTTCTCTGTATTTGGG+AGG - chr8_2:12856677-12856696 None:intergenic 40.0%
! TAGTCCTTTTGCTCGAAAGT+AGG - chr8_2:12856717-12856736 None:intergenic 40.0%
TTTCGAGCAAAAGGACTAGA+TGG + chr8_2:12856719-12856738 Msa1235040:CDS 40.0%
ACCTTTCTCTTGAAACTGGA+GGG - chr8_2:12856969-12856988 None:intergenic 40.0%
AACCTTTCTCTTGAAACTGG+AGG - chr8_2:12856970-12856989 None:intergenic 40.0%
TGGAACCTTTCTCTTGAAAC+TGG - chr8_2:12856973-12856992 None:intergenic 40.0%
TGTGGAATCAAGGTTAGGTT+TGG - chr8_2:12855117-12855136 None:intergenic 40.0%
TGCTTTGCGTTCATTGAATG+TGG - chr8_2:12855135-12855154 None:intergenic 40.0%
GAAACAAAAGCAGGTGTGAA+AGG + chr8_2:12855161-12855180 Msa1235040:CDS 40.0%
! TCAAGGAAGCATGTGAAACT+TGG + chr8_2:12855342-12855361 Msa1235040:CDS 40.0%
! CAAGGAAGCATGTGAAACTT+GGG + chr8_2:12855343-12855362 Msa1235040:CDS 40.0%
! AAGGAAGCATGTGAAACTTG+GGG + chr8_2:12855344-12855363 Msa1235040:CDS 40.0%
AATCCCTTTGAGTGTTCTTG+AGG + chr8_2:12855391-12855410 Msa1235040:CDS 40.0%
ATAGATCTCCAGCACTCAAT+TGG + chr8_2:12855525-12855544 Msa1235040:CDS 40.0%
ACAAACATACCTGCATACTG+CGG - chr8_2:12855606-12855625 None:intergenic 40.0%
! ATTTATGCGGTCAGTTGGTA+TGG + chr8_2:12855641-12855660 Msa1235040:intron 40.0%
TATTGCAACATGTAGGGTTG+TGG + chr8_2:12855665-12855684 Msa1235040:intron 40.0%
TAGGGTTGTGGTTCAAATCT+GGG + chr8_2:12855677-12855696 Msa1235040:intron 40.0%
CAGGACAAGAAGGATAGTAA+TGG - chr8_2:12856084-12856103 None:intergenic 40.0%
!! AATTCTGGTTCAGGACAAGA+AGG - chr8_2:12856094-12856113 None:intergenic 40.0%
GTGCTTCTACAAGACCATAT+TGG + chr8_2:12856157-12856176 Msa1235040:CDS 40.0%
CTTCTACAAGACCATATTGG+TGG + chr8_2:12856160-12856179 Msa1235040:CDS 40.0%
ACATTAACTATGAGAGCTCC+AGG - chr8_2:12856232-12856251 None:intergenic 40.0%
GGAGCTCTCATAGTTAATGT+TGG + chr8_2:12856232-12856251 Msa1235040:CDS 40.0%
!! GGTCTCATTGATTCGATTGT+TGG + chr8_2:12856417-12856436 Msa1235040:intron 40.0%
!! CATTGATTCGATTGTTGGTC+AGG + chr8_2:12856422-12856441 Msa1235040:intron 40.0%
TATTCTTGGACCAACTGGAT+TGG - chr8_2:12856570-12856589 None:intergenic 40.0%
ACAGATATTCTTGGACCAAC+TGG - chr8_2:12856575-12856594 None:intergenic 40.0%
! AAAGCATCCACAAAGCTCTA+TGG + chr8_2:12856620-12856639 Msa1235040:CDS 40.0%
AAAGCTCTATGGACCTATGA+AGG + chr8_2:12856631-12856650 Msa1235040:CDS 40.0%
CTAGTTTCTCTGTATTTGGG+AGG - chr8_2:12856677-12856696 None:intergenic 40.0%
! TAGTCCTTTTGCTCGAAAGT+AGG - chr8_2:12856717-12856736 None:intergenic 40.0%
TTTCGAGCAAAAGGACTAGA+TGG + chr8_2:12856719-12856738 Msa1235040:CDS 40.0%
ACCTTTCTCTTGAAACTGGA+GGG - chr8_2:12856969-12856988 None:intergenic 40.0%
AACCTTTCTCTTGAAACTGG+AGG - chr8_2:12856970-12856989 None:intergenic 40.0%
TGGAACCTTTCTCTTGAAAC+TGG - chr8_2:12856973-12856992 None:intergenic 40.0%
!! GTGAAAGGACTTGTTGATGC+AGG + chr8_2:12855176-12855195 Msa1235040:CDS 45.0%
!! GGTTGATGGTGGAATAAGCT+TGG - chr8_2:12855215-12855234 None:intergenic 45.0%
!! CGTATTTGTCTGGTTGATGG+TGG - chr8_2:12855226-12855245 None:intergenic 45.0%
CCTCGTATTTGTCTGGTTGA+TGG - chr8_2:12855229-12855248 None:intergenic 45.0%
CCATCAACCAGACAAATACG+AGG + chr8_2:12855226-12855245 Msa1235040:CDS 45.0%
TTGGCTTCCTCGTATTTGTC+TGG - chr8_2:12855236-12855255 None:intergenic 45.0%
CCTCCTCAAGAACACTCAAA+GGG - chr8_2:12855397-12855416 None:intergenic 45.0%
ACCTCCTCAAGAACACTCAA+AGG - chr8_2:12855398-12855417 None:intergenic 45.0%
GTTCTTGAGGAGGTGAAAGA+TGG + chr8_2:12855404-12855423 Msa1235040:CDS 45.0%
AGGTGAAAGATGGAGTGAAG+AGG + chr8_2:12855414-12855433 Msa1235040:CDS 45.0%
ATCTCCAGCACTCAATTGGA+GGG + chr8_2:12855529-12855548 Msa1235040:CDS 45.0%
!! GGAAAATCTTCTGGTTTGGG+AGG - chr8_2:12855584-12855603 None:intergenic 45.0%
!! GCGGGAAAATCTTCTGGTTT+GGG - chr8_2:12855587-12855606 None:intergenic 45.0%
! TGCGGGAAAATCTTCTGGTT+TGG - chr8_2:12855588-12855607 None:intergenic 45.0%
CATACTGCGGGAAAATCTTC+TGG - chr8_2:12855593-12855612 None:intergenic 45.0%
! AAGATTTTCCCGCAGTATGC+AGG + chr8_2:12855594-12855613 Msa1235040:CDS 45.0%
CAAACATACCTGCATACTGC+GGG - chr8_2:12855605-12855624 None:intergenic 45.0%
GTAGGGTTGTGGTTCAAATC+TGG + chr8_2:12855676-12855695 Msa1235040:intron 45.0%
GGGAAACAGGTGATGAATCT+TGG + chr8_2:12855965-12855984 Msa1235040:CDS 45.0%
TCCTGAACCAGAATTGACTG+TGG + chr8_2:12856099-12856118 Msa1235040:CDS 45.0%
CCTGAACCAGAATTGACTGT+GGG + chr8_2:12856100-12856119 Msa1235040:CDS 45.0%
GTTGTTCCCACAGTCAATTC+TGG - chr8_2:12856109-12856128 None:intergenic 45.0%
GAACTTGGAGACCACCAATA+TGG - chr8_2:12856174-12856193 None:intergenic 45.0%
! AGAGTACTTGCCAATCCAGT+TGG + chr8_2:12856557-12856576 Msa1235040:CDS 45.0%
! TGTGGATGCTTTAAGTGCTG+TGG - chr8_2:12856612-12856631 None:intergenic 45.0%
CATAGGTCCATAGAGCTTTG+TGG - chr8_2:12856630-12856649 None:intergenic 45.0%
ACCCTCCAGTTTCAAGAGAA+AGG + chr8_2:12856965-12856984 Msa1235040:three_prime_UTR 45.0%
!! GTGAAAGGACTTGTTGATGC+AGG + chr8_2:12855176-12855195 Msa1235040:CDS 45.0%
!! GGTTGATGGTGGAATAAGCT+TGG - chr8_2:12855215-12855234 None:intergenic 45.0%
!! CGTATTTGTCTGGTTGATGG+TGG - chr8_2:12855226-12855245 None:intergenic 45.0%
CCTCGTATTTGTCTGGTTGA+TGG - chr8_2:12855229-12855248 None:intergenic 45.0%
CCATCAACCAGACAAATACG+AGG + chr8_2:12855226-12855245 Msa1235040:CDS 45.0%
TTGGCTTCCTCGTATTTGTC+TGG - chr8_2:12855236-12855255 None:intergenic 45.0%
CCTCCTCAAGAACACTCAAA+GGG - chr8_2:12855397-12855416 None:intergenic 45.0%
ACCTCCTCAAGAACACTCAA+AGG - chr8_2:12855398-12855417 None:intergenic 45.0%
GTTCTTGAGGAGGTGAAAGA+TGG + chr8_2:12855404-12855423 Msa1235040:CDS 45.0%
AGGTGAAAGATGGAGTGAAG+AGG + chr8_2:12855414-12855433 Msa1235040:CDS 45.0%
ATCTCCAGCACTCAATTGGA+GGG + chr8_2:12855529-12855548 Msa1235040:CDS 45.0%
!! GGAAAATCTTCTGGTTTGGG+AGG - chr8_2:12855584-12855603 None:intergenic 45.0%
!! GCGGGAAAATCTTCTGGTTT+GGG - chr8_2:12855587-12855606 None:intergenic 45.0%
! TGCGGGAAAATCTTCTGGTT+TGG - chr8_2:12855588-12855607 None:intergenic 45.0%
CATACTGCGGGAAAATCTTC+TGG - chr8_2:12855593-12855612 None:intergenic 45.0%
! AAGATTTTCCCGCAGTATGC+AGG + chr8_2:12855594-12855613 Msa1235040:CDS 45.0%
CAAACATACCTGCATACTGC+GGG - chr8_2:12855605-12855624 None:intergenic 45.0%
GTAGGGTTGTGGTTCAAATC+TGG + chr8_2:12855676-12855695 Msa1235040:intron 45.0%
GGGAAACAGGTGATGAATCT+TGG + chr8_2:12855965-12855984 Msa1235040:CDS 45.0%
TCCTGAACCAGAATTGACTG+TGG + chr8_2:12856099-12856118 Msa1235040:CDS 45.0%
CCTGAACCAGAATTGACTGT+GGG + chr8_2:12856100-12856119 Msa1235040:CDS 45.0%
GTTGTTCCCACAGTCAATTC+TGG - chr8_2:12856109-12856128 None:intergenic 45.0%
GAACTTGGAGACCACCAATA+TGG - chr8_2:12856174-12856193 None:intergenic 45.0%
! AGAGTACTTGCCAATCCAGT+TGG + chr8_2:12856557-12856576 Msa1235040:CDS 45.0%
! TGTGGATGCTTTAAGTGCTG+TGG - chr8_2:12856612-12856631 None:intergenic 45.0%
CATAGGTCCATAGAGCTTTG+TGG - chr8_2:12856630-12856649 None:intergenic 45.0%
ACCCTCCAGTTTCAAGAGAA+AGG + chr8_2:12856965-12856984 Msa1235040:three_prime_UTR 45.0%
CCCTTTGAGTGTTCTTGAGG+AGG + chr8_2:12855394-12855413 Msa1235040:CDS 50.0%
GATCTCCAGCACTCAATTGG+AGG + chr8_2:12855528-12855547 Msa1235040:CDS 50.0%
CTATCCCTCCAATTGAGTGC+TGG - chr8_2:12855536-12855555 None:intergenic 50.0%
!! TCTTCTGGTTTGGGAGGATC+AGG - chr8_2:12855578-12855597 None:intergenic 50.0%
!! CCCACAGTCAATTCTGGTTC+AGG - chr8_2:12856103-12856122 None:intergenic 50.0%
ACTATGAGAGCTCCAGGAAC+AGG - chr8_2:12856226-12856245 None:intergenic 50.0%
GTGGCCTACTTTCGAGCAAA+AGG + chr8_2:12856710-12856729 Msa1235040:CDS 50.0%
ATCATGGCCGGGACAATTCT+TGG - chr8_2:12857030-12857049 None:intergenic 50.0%
GTCCCGGCCATGATTTGAAT+TGG + chr8_2:12857036-12857055 Msa1235040:three_prime_UTR 50.0%
CCCTTTGAGTGTTCTTGAGG+AGG + chr8_2:12855394-12855413 Msa1235040:CDS 50.0%
GATCTCCAGCACTCAATTGG+AGG + chr8_2:12855528-12855547 Msa1235040:CDS 50.0%
CTATCCCTCCAATTGAGTGC+TGG - chr8_2:12855536-12855555 None:intergenic 50.0%
!! TCTTCTGGTTTGGGAGGATC+AGG - chr8_2:12855578-12855597 None:intergenic 50.0%
!! CCCACAGTCAATTCTGGTTC+AGG - chr8_2:12856103-12856122 None:intergenic 50.0%
ACTATGAGAGCTCCAGGAAC+AGG - chr8_2:12856226-12856245 None:intergenic 50.0%
GTGGCCTACTTTCGAGCAAA+AGG + chr8_2:12856710-12856729 Msa1235040:CDS 50.0%
ATCATGGCCGGGACAATTCT+TGG - chr8_2:12857030-12857049 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 12854880 12857058 12854880 ID=Msa1235040;Name=Msa1235040
chr8_2 mRNA 12854880 12857058 12854880 ID=Msa1235040-mRNA-1;Parent=Msa1235040;Name=Msa1235040-mRNA-1;_AED=0.28;_eAED=0.28;_QI=215|1|1|1|1|1|3|286|364
chr8_2 exon 12854880 12855615 12854880 ID=Msa1235040-mRNA-1:exon:4983;Parent=Msa1235040-mRNA-1
chr8_2 exon 12855946 12856267 12855946 ID=Msa1235040-mRNA-1:exon:4984;Parent=Msa1235040-mRNA-1
chr8_2 exon 12856521 12857058 12856521 ID=Msa1235040-mRNA-1:exon:4985;Parent=Msa1235040-mRNA-1
chr8_2 five_prime_UTR 12854880 12855094 12854880 ID=Msa1235040-mRNA-1:five_prime_utr;Parent=Msa1235040-mRNA-1
chr8_2 CDS 12855095 12855615 12855095 ID=Msa1235040-mRNA-1:cds;Parent=Msa1235040-mRNA-1
chr8_2 CDS 12855946 12856267 12855946 ID=Msa1235040-mRNA-1:cds;Parent=Msa1235040-mRNA-1
chr8_2 CDS 12856521 12856772 12856521 ID=Msa1235040-mRNA-1:cds;Parent=Msa1235040-mRNA-1
chr8_2 three_prime_UTR 12856773 12857058 12856773 ID=Msa1235040-mRNA-1:three_prime_utr;Parent=Msa1235040-mRNA-1
Gene Sequence

>Msa1235040

ATGGGAACCATTGATACAACCAAACCTAACCTTGATTCCACATTCAATGAACGCAAAGCATTTGATGAAACAAAAGCAGGTGTGAAAGGACTTGTTGATGCAGGAGTTGAGAAGATACCAAGCTTATTCCACCATCAACCAGACAAATACGAGGAAGCCAACAACACAAGTCATGTTATTCCTGTCATCGACCTTAAAGATATTGATAATAAAGACCCAAGTATTCATCAAGGAATTGTTGACGATATCAAGGAAGCATGTGAAACTTGGGGTTTTTTTCAAGTTGTTAATCATGGAATCCCTTTGAGTGTTCTTGAGGAGGTGAAAGATGGAGTGAAGAGGTTTTATGAACAAGACACAGAAGTCAAAAAAAGTATGTATACAAGAGATTATCAGAGATCCTTTATTTACAATAGCAATTTTTATATTTATAGATCTCCAGCACTCAATTGGAGGGATAGTTTTAGTTGTTACTTGGCTCCTGATCCTCCCAAACCAGAAGATTTTCCCGCAGTATGCAGAGATGTAATACTAGAATATGGGAAACAGGTGATGAATCTTGGAACTTTACTGTTTGAATTGATGTCAGAAGCATTAGGTTTGAATCCAAACCATCTAAAAGATATGGATTGTGCTAAAGGACTGTTTGCTCTTTGCCATTACTATCCTTCTTGTCCTGAACCAGAATTGACTGTGGGAACAACAAAGCATTCTGATAATGATTTTCTCACAGTGCTTCTACAAGACCATATTGGTGGTCTCCAAGTTCTTTATGAAGATAAATGGATTGATATAACACCTGTTCCTGGAGCTCTCATAGTTAATGTTGGTGATCTTTTGCAGCTTATAACAAATGACAAATTCAAGAGTGTTGTACATAGAGTACTTGCCAATCCAGTTGGTCCAAGAATATCTGTTGCATGTTTTTTCTCCACAGCACTTAAAGCATCCACAAAGCTCTATGGACCTATGAAGGAATTATTATCAGAAGACAATCCTCCCAAATACAGAGAAACTAGTGTTGCTGATTATGTGGCCTACTTTCGAGCAAAAGGACTAGATGGTACTTCTGCACTTGAACATTACAAAATTTGA

Protein sequence

>Msa1235040

MGTIDTTKPNLDSTFNERKAFDETKAGVKGLVDAGVEKIPSLFHHQPDKYEEANNTSHVIPVIDLKDIDNKDPSIHQGIVDDIKEACETWGFFQVVNHGIPLSVLEEVKDGVKRFYEQDTEVKKSMYTRDYQRSFIYNSNFYIYRSPALNWRDSFSCYLAPDPPKPEDFPAVCRDVILEYGKQVMNLGTLLFELMSEALGLNPNHLKDMDCAKGLFALCHYYPSCPEPELTVGTTKHSDNDFLTVLLQDHIGGLQVLYEDKWIDITPVPGALIVNVGDLLQLITNDKFKSVVHRVLANPVGPRISVACFFSTALKASTKLYGPMKELLSEDNPPKYRETSVADYVAYFRAKGLDGTSALEHYKI*