Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373380 | XP_003592799.2 | 97.015 | 402 | 11 | 1 | 1 | 401 | 1 | 402 | 0.0 | 808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373380 | sp|Q9MAT6|HMG15_ARATH | 60.000 | 380 | 114 | 11 | 1 | 362 | 1 | 360 | 1.31e-133 | 393 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373380 | G7IF34 | 97.015 | 402 | 11 | 1 | 1 | 401 | 1 | 402 | 0.0 | 808 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1373380 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000780 | Msa1373380 | 0.816865 | 4.436543e-52 | -8.615850e-47 |
| Msa0001460 | Msa1373380 | 0.800350 | 1.502189e-48 | -8.615850e-47 |
| Msa0001540 | Msa1373380 | 0.803301 | 3.722222e-49 | -8.615850e-47 |
| Msa0006050 | Msa1373380 | 0.804130 | 2.504556e-49 | -8.615850e-47 |
| Msa0009800 | Msa1373380 | 0.837393 | 5.338382e-57 | -8.615850e-47 |
| Msa0009890 | Msa1373380 | 0.829047 | 6.403473e-55 | -8.615850e-47 |
| Msa0017130 | Msa1373380 | 0.804887 | 1.741300e-49 | -8.615850e-47 |
| Msa0028950 | Msa1373380 | 0.807753 | 4.333820e-50 | -8.615850e-47 |
| Msa0030400 | Msa1373380 | 0.815796 | 7.695520e-52 | -8.615850e-47 |
| Msa0034320 | Msa1373380 | 0.809801 | 1.581448e-50 | -8.615850e-47 |
| Msa0037820 | Msa1373380 | 0.809436 | 1.894188e-50 | -8.615850e-47 |
| Msa0040410 | Msa1373380 | 0.812836 | 3.468755e-51 | -8.615850e-47 |
| Msa0044380 | Msa1373380 | 0.809352 | 1.974078e-50 | -8.615850e-47 |
| Msa0046060 | Msa1373380 | 0.898602 | 4.515914e-77 | -8.615850e-47 |
| Msa0046360 | Msa1373380 | 0.807360 | 5.251439e-50 | -8.615850e-47 |
| Msa0047470 | Msa1373380 | 0.806871 | 6.664007e-50 | -8.615850e-47 |
| Msa0051600 | Msa1373380 | 0.802876 | 4.556021e-49 | -8.615850e-47 |
| Msa0065690 | Msa1373380 | 0.804598 | 2.000635e-49 | -8.615850e-47 |
| Msa0084630 | Msa1373380 | 0.804648 | 1.952705e-49 | -8.615850e-47 |
| Msa0092660 | Msa1373380 | 0.812118 | 4.979298e-51 | -8.615850e-47 |
| Msa0092730 | Msa1373380 | 0.815420 | 9.328811e-52 | -8.615850e-47 |
| Msa0094670 | Msa1373380 | 0.822711 | 2.047090e-53 | -8.615850e-47 |
| Msa0105210 | Msa1373380 | 0.805419 | 1.347218e-49 | -8.615850e-47 |
| Msa0107460 | Msa1373380 | 0.807626 | 4.611222e-50 | -8.615850e-47 |
| Msa0112290 | Msa1373380 | 0.823054 | 1.702857e-53 | -8.615850e-47 |
| Msa0115950 | Msa1373380 | 0.806430 | 8.256709e-50 | -8.615850e-47 |
| Msa1366400 | Msa1373380 | 0.808069 | 3.712196e-50 | -8.615850e-47 |
| Msa1373380 | Msa1374850 | 0.809709 | 1.655102e-50 | -8.615850e-47 |
| Msa1373380 | Msa1393720 | 0.814155 | 1.779619e-51 | -8.615850e-47 |
| Msa1373380 | Msa1394900 | 0.833991 | 3.879649e-56 | -8.615850e-47 |
| Msa1373380 | Msa1406880 | 0.823451 | 1.375601e-53 | -8.615850e-47 |
| Msa1373380 | Msa1410170 | 0.801425 | 9.058475e-49 | -8.615850e-47 |
| Msa1373380 | Msa1411830 | 0.801405 | 9.144986e-49 | -8.615850e-47 |
| Msa1373380 | Msa1412520 | 0.844653 | 6.618201e-59 | -8.615850e-47 |
| Msa1373380 | Msa1416460 | 0.813032 | 3.142116e-51 | -8.615850e-47 |
| Msa1373380 | Msa1418600 | 0.803591 | 3.239711e-49 | -8.615850e-47 |
| Msa1373380 | Msa1420520 | 0.822967 | 1.784540e-53 | -8.615850e-47 |
| Msa1373380 | Msa1422490 | 0.832648 | 8.382750e-56 | -8.615850e-47 |
| Msa1373380 | Msa1422500 | 0.864311 | 1.331838e-64 | -8.615850e-47 |
| Msa1373380 | Msa1423190 | 0.834477 | 2.930566e-56 | -8.615850e-47 |
| Msa1373380 | Msa1430760 | 0.817952 | 2.525214e-52 | -8.615850e-47 |
| Msa1373380 | Msa1437320 | 0.830948 | 2.202458e-55 | -8.615850e-47 |
| Msa1373380 | Msa1440180 | 0.816117 | 6.524682e-52 | -8.615850e-47 |
| Msa1373380 | Msa1449680 | 0.806230 | 9.099321e-50 | -8.615850e-47 |
| Msa1373380 | Msa1449740 | 0.817279 | 3.580410e-52 | -8.615850e-47 |
| Msa1373380 | Msa1458330 | 0.831748 | 1.400127e-55 | -8.615850e-47 |
| Msa1373380 | Msa1459540 | 0.806263 | 8.956475e-50 | -8.615850e-47 |
| Msa1373380 | Msa1464800 | 0.840636 | 7.718990e-58 | -8.615850e-47 |
| Msa0604700 | Msa1373380 | 0.819060 | 1.416206e-52 | -8.615850e-47 |
| Msa0607300 | Msa1373380 | 0.823675 | 1.219267e-53 | -8.615850e-47 |
| Msa0609990 | Msa1373380 | 0.813543 | 2.427147e-51 | -8.615850e-47 |
| Msa0625330 | Msa1373380 | 0.806861 | 6.696771e-50 | -8.615850e-47 |
| Msa0628060 | Msa1373380 | 0.803628 | 3.183166e-49 | -8.615850e-47 |
| Msa0629500 | Msa1373380 | 0.853073 | 3.041289e-61 | -8.615850e-47 |
| Msa0635130 | Msa1373380 | 0.803574 | 3.266924e-49 | -8.615850e-47 |
| Msa0638500 | Msa1373380 | 0.819582 | 1.077058e-52 | -8.615850e-47 |
| Msa0645780 | Msa1373380 | 0.806658 | 7.391041e-50 | -8.615850e-47 |
| Msa0645820 | Msa1373380 | 0.810839 | 9.439765e-51 | -8.615850e-47 |
| Msa0648630 | Msa1373380 | 0.811447 | 6.970521e-51 | -8.615850e-47 |
| Msa0650360 | Msa1373380 | 0.857989 | 1.120820e-62 | -8.615850e-47 |
| Msa0667970 | Msa1373380 | 0.821600 | 3.704065e-53 | -8.615850e-47 |
| Msa0677840 | Msa1373380 | 0.850184 | 2.000999e-60 | -8.615850e-47 |
| Msa0685540 | Msa1373380 | 0.800758 | 1.240340e-48 | -8.615850e-47 |
| Msa0690350 | Msa1373380 | 0.812990 | 3.210435e-51 | -8.615850e-47 |
| Msa0691100 | Msa1373380 | 0.812085 | 5.061840e-51 | -8.615850e-47 |
| Msa0697180 | Msa1373380 | 0.817327 | 3.492713e-52 | -8.615850e-47 |
| Msa0709480 | Msa1373380 | 0.807948 | 3.938791e-50 | -8.615850e-47 |
| Msa0769830 | Msa1373380 | 0.803182 | 3.938620e-49 | -8.615850e-47 |
| Msa0780140 | Msa1373380 | 0.825676 | 4.117347e-54 | -8.615850e-47 |
| Msa0789800 | Msa1373380 | 0.811799 | 5.842374e-51 | -8.615850e-47 |
| Msa0790180 | Msa1373380 | 0.811995 | 5.295516e-51 | -8.615850e-47 |
| Msa0790830 | Msa1373380 | 0.802078 | 6.655096e-49 | -8.615850e-47 |
| Msa0793090 | Msa1373380 | 0.989938 | 2.533808e-180 | -8.615850e-47 |
| Msa0794460 | Msa1373380 | 0.815969 | 7.038248e-52 | -8.615850e-47 |
| Msa0811510 | Msa1373380 | 0.801691 | 7.991802e-49 | -8.615850e-47 |
| Msa0824140 | Msa1373380 | 0.823159 | 1.608973e-53 | -8.615850e-47 |
| Msa0829570 | Msa1373380 | 0.824888 | 6.322937e-54 | -8.615850e-47 |
| Msa0830720 | Msa1373380 | 0.804191 | 2.432310e-49 | -8.615850e-47 |
| Msa0833630 | Msa1373380 | 0.813173 | 2.926029e-51 | -8.615850e-47 |
| Msa0130760 | Msa1373380 | 0.829856 | 4.071844e-55 | -8.615850e-47 |
| Msa0130800 | Msa1373380 | 0.823177 | 1.593800e-53 | -8.615850e-47 |
| Msa0137600 | Msa1373380 | 0.814881 | 1.228984e-51 | -8.615850e-47 |
| Msa0142000 | Msa1373380 | 0.812894 | 3.369672e-51 | -8.615850e-47 |
| Msa0143490 | Msa1373380 | 0.814445 | 1.535341e-51 | -8.615850e-47 |
| Msa0143980 | Msa1373380 | 0.809799 | 1.582435e-50 | -8.615850e-47 |
| Msa0171920 | Msa1373380 | 0.815979 | 7.002729e-52 | -8.615850e-47 |
| Msa0173610 | Msa1373380 | 0.815104 | 1.096689e-51 | -8.615850e-47 |
| Msa0173760 | Msa1373380 | 0.846099 | 2.685959e-59 | -8.615850e-47 |
| Msa0173850 | Msa1373380 | 0.820527 | 6.542586e-53 | -8.615850e-47 |
| Msa0175280 | Msa1373380 | 0.828064 | 1.106296e-54 | -8.615850e-47 |
| Msa0176710 | Msa1373380 | 0.812799 | 3.534083e-51 | -8.615850e-47 |
| Msa0178940 | Msa1373380 | 0.801708 | 7.927733e-49 | -8.615850e-47 |
| Msa0181010 | Msa1373380 | 0.835658 | 1.475990e-56 | -8.615850e-47 |
| Msa0181020 | Msa1373380 | 0.871803 | 5.172994e-67 | -8.615850e-47 |
| Msa0183490 | Msa1373380 | 0.811909 | 5.530090e-51 | -8.615850e-47 |
| Msa0192020 | Msa1373380 | 0.802600 | 5.193946e-49 | -8.615850e-47 |
| Msa0192710 | Msa1373380 | 0.811464 | 6.909860e-51 | -8.615850e-47 |
| Msa0193000 | Msa1373380 | 0.800589 | 1.342667e-48 | -8.615850e-47 |
| Msa0199740 | Msa1373380 | 0.805023 | 1.630758e-49 | -8.615850e-47 |
| Msa0206940 | Msa1373380 | 0.862446 | 5.039510e-64 | -8.615850e-47 |
| Msa0235180 | Msa1373380 | 0.825224 | 5.267411e-54 | -8.615850e-47 |
| Msa1228880 | Msa1373380 | 0.803403 | 3.545448e-49 | -8.615850e-47 |
| Msa1233770 | Msa1373380 | 0.813681 | 2.262727e-51 | -8.615850e-47 |
| Msa1235040 | Msa1373380 | 0.828209 | 1.021027e-54 | -8.615850e-47 |
| Msa1238700 | Msa1373380 | 0.835274 | 1.845570e-56 | -8.615850e-47 |
| Msa1264560 | Msa1373380 | 0.820536 | 6.512168e-53 | -8.615850e-47 |
| Msa1276080 | Msa1373380 | 0.810169 | 1.317160e-50 | -8.615850e-47 |
| Msa1305520 | Msa1373380 | 0.827208 | 1.776591e-54 | -8.615850e-47 |
| Msa1305650 | Msa1373380 | 0.822900 | 1.849250e-53 | -8.615850e-47 |
| Msa1309100 | Msa1373380 | 0.807769 | 4.299746e-50 | -8.615850e-47 |
| Msa1309360 | Msa1373380 | 0.802620 | 5.146178e-49 | -8.615850e-47 |
| Msa1326000 | Msa1373380 | 0.824013 | 1.015965e-53 | -8.615850e-47 |
| Msa0367370 | Msa1373380 | 0.815882 | 7.361924e-52 | -8.615850e-47 |
| Msa0369780 | Msa1373380 | 0.833417 | 5.397906e-56 | -8.615850e-47 |
| Msa0371870 | Msa1373380 | 0.837280 | 5.705350e-57 | -8.615850e-47 |
| Msa0379390 | Msa1373380 | 0.813274 | 2.781418e-51 | -8.615850e-47 |
| Msa0380360 | Msa1373380 | 0.816920 | 4.311275e-52 | -8.615850e-47 |
| Msa0380520 | Msa1373380 | 0.802104 | 6.571100e-49 | -8.615850e-47 |
| Msa0382500 | Msa1373380 | 0.827299 | 1.688746e-54 | -8.615850e-47 |
| Msa0387790 | Msa1373380 | 0.834924 | 2.261400e-56 | -8.615850e-47 |
| Msa0415930 | Msa1373380 | 0.804887 | 1.741044e-49 | -8.615850e-47 |
| Msa0417150 | Msa1373380 | 0.820241 | 7.608878e-53 | -8.615850e-47 |
| Msa0420800 | Msa1373380 | 0.821707 | 3.498917e-53 | -8.615850e-47 |
| Msa0426480 | Msa1373380 | 0.850348 | 1.800265e-60 | -8.615850e-47 |
| Msa0432680 | Msa1373380 | 0.832747 | 7.925292e-56 | -8.615850e-47 |
| Msa0432720 | Msa1373380 | 0.800580 | 1.347998e-48 | -8.615850e-47 |
| Msa0437780 | Msa1373380 | 0.998049 | 6.017943e-255 | -8.615850e-47 |
| Msa0438460 | Msa1373380 | 0.809263 | 2.063200e-50 | -8.615850e-47 |
| Msa0455200 | Msa1373380 | 0.805360 | 1.386260e-49 | -8.615850e-47 |
| Msa0463990 | Msa1373380 | 0.823272 | 1.514706e-53 | -8.615850e-47 |
| Msa0466070 | Msa1373380 | 0.806691 | 7.275136e-50 | -8.615850e-47 |
| Msa0466340 | Msa1373380 | 0.832234 | 1.062035e-55 | -8.615850e-47 |
| Msa0467080 | Msa1373380 | 0.813930 | 1.994509e-51 | -8.615850e-47 |
| Msa0473010 | Msa1373380 | 0.813322 | 2.714245e-51 | -8.615850e-47 |
| Msa0480150 | Msa1373380 | 0.835199 | 1.928429e-56 | -8.615850e-47 |
| Msa1002980 | Msa1373380 | 0.814675 | 1.365579e-51 | -8.615850e-47 |
| Msa1029320 | Msa1373380 | 0.808278 | 3.349716e-50 | -8.615850e-47 |
| Msa1029430 | Msa1373380 | 0.811595 | 6.471951e-51 | -8.615850e-47 |
| Msa1030870 | Msa1373380 | 0.800420 | 1.453318e-48 | -8.615850e-47 |
| Msa1040070 | Msa1373380 | 0.805565 | 1.255448e-49 | -8.615850e-47 |
| Msa1069960 | Msa1373380 | 0.830529 | 2.790527e-55 | -8.615850e-47 |
| Msa1079480 | Msa1373380 | 0.809071 | 2.267581e-50 | -8.615850e-47 |
| Msa1080620 | Msa1373380 | 0.852146 | 5.590357e-61 | -8.615850e-47 |
| Msa1080690 | Msa1373380 | 0.853144 | 2.900634e-61 | -8.615850e-47 |
| Msa1080840 | Msa1373380 | 0.815759 | 7.841169e-52 | -8.615850e-47 |
| Msa1081700 | Msa1373380 | 0.820581 | 6.358684e-53 | -8.615850e-47 |
| Msa1081850 | Msa1373380 | 0.819834 | 9.433016e-53 | -8.615850e-47 |
| Msa1083460 | Msa1373380 | 0.835004 | 2.159932e-56 | -8.615850e-47 |
| Msa1084490 | Msa1373380 | 0.814184 | 1.753604e-51 | -8.615850e-47 |
| Msa0242290 | Msa1373380 | 0.814471 | 1.514886e-51 | -8.615850e-47 |
| Msa0250520 | Msa1373380 | 0.841136 | 5.705967e-58 | -8.615850e-47 |
| Msa0258380 | Msa1373380 | 0.815712 | 8.030957e-52 | -8.615850e-47 |
| Msa0269830 | Msa1373380 | 0.807895 | 4.042418e-50 | -8.615850e-47 |
| Msa0280140 | Msa1373380 | 0.840489 | 8.434627e-58 | -8.615850e-47 |
| Msa0282860 | Msa1373380 | 0.807362 | 5.245744e-50 | -8.615850e-47 |
| Msa0288220 | Msa1373380 | 0.807236 | 5.577469e-50 | -8.615850e-47 |
| Msa0296000 | Msa1373380 | 0.817139 | 3.849339e-52 | -8.615850e-47 |
| Msa0308430 | Msa1373380 | 0.834658 | 2.638248e-56 | -8.615850e-47 |
| Msa0313800 | Msa1373380 | 0.833792 | 4.350863e-56 | -8.615850e-47 |
| Msa0327900 | Msa1373380 | 0.811032 | 8.575010e-51 | -8.615850e-47 |
| Msa0333900 | Msa1373380 | 0.841846 | 3.709153e-58 | -8.615850e-47 |
| Msa0334020 | Msa1373380 | 0.840096 | 1.067855e-57 | -8.615850e-47 |
| Msa0334980 | Msa1373380 | 0.820257 | 7.547629e-53 | -8.615850e-47 |
| Msa0340440 | Msa1373380 | 0.819480 | 1.136199e-52 | -8.615850e-47 |
| Msa0342620 | Msa1373380 | 0.818206 | 2.211738e-52 | -8.615850e-47 |
| Msa0350020 | Msa1373380 | 0.807456 | 5.011518e-50 | -8.615850e-47 |
| Msa0352200 | Msa1373380 | 0.805854 | 1.092001e-49 | -8.615850e-47 |
| Msa1118980 | Msa1373380 | 0.820952 | 5.226226e-53 | -8.615850e-47 |
| Msa1119860 | Msa1373380 | 0.840424 | 8.766686e-58 | -8.615850e-47 |
| Msa1125780 | Msa1373380 | 0.804552 | 2.044684e-49 | -8.615850e-47 |
| Msa1125950 | Msa1373380 | 0.806220 | 9.143891e-50 | -8.615850e-47 |
| Msa1126310 | Msa1373380 | 0.801382 | 9.244933e-49 | -8.615850e-47 |
| Msa1126910 | Msa1373380 | 0.826021 | 3.409307e-54 | -8.615850e-47 |
| Msa1130650 | Msa1373380 | 0.812676 | 3.760910e-51 | -8.615850e-47 |
| Msa1130730 | Msa1373380 | 0.816726 | 4.765667e-52 | -8.615850e-47 |
| Msa1131900 | Msa1373380 | 0.829633 | 4.614127e-55 | -8.615850e-47 |
| Msa1132820 | Msa1373380 | 0.831237 | 1.871011e-55 | -8.615850e-47 |
| Msa1144950 | Msa1373380 | 0.842644 | 2.279425e-58 | -8.615850e-47 |
| Msa1145370 | Msa1373380 | 0.823475 | 1.358135e-53 | -8.615850e-47 |
| Msa1165290 | Msa1373380 | 0.809578 | 1.765920e-50 | -8.615850e-47 |
| Msa1167160 | Msa1373380 | 0.820777 | 5.731919e-53 | -8.615850e-47 |
| Msa1171340 | Msa1373380 | 0.804419 | 2.180022e-49 | -8.615850e-47 |
| Msa1173380 | Msa1373380 | 0.801630 | 8.225731e-49 | -8.615850e-47 |
| Msa1222580 | Msa1373380 | 0.827092 | 1.893757e-54 | -8.615850e-47 |
| Msa0509540 | Msa1373380 | 0.829268 | 5.660788e-55 | -8.615850e-47 |
| Msa0512130 | Msa1373380 | 0.843657 | 1.224496e-58 | -8.615850e-47 |
| Msa0512310 | Msa1373380 | 0.836431 | 9.397956e-57 | -8.615850e-47 |
| Msa0517190 | Msa1373380 | 0.811283 | 7.565018e-51 | -8.615850e-47 |
| Msa0524510 | Msa1373380 | 0.801651 | 8.144057e-49 | -8.615850e-47 |
| Msa0525270 | Msa1373380 | 0.802315 | 5.946286e-49 | -8.615850e-47 |
| Msa0528740 | Msa1373380 | 0.849023 | 4.219799e-60 | -8.615850e-47 |
| Msa0528870 | Msa1373380 | 0.810738 | 9.928744e-51 | -8.615850e-47 |
| Msa0530340 | Msa1373380 | 0.800412 | 1.458745e-48 | -8.615850e-47 |
| Msa0530930 | Msa1373380 | 0.825108 | 5.610715e-54 | -8.615850e-47 |
| Msa0539320 | Msa1373380 | 0.800877 | 1.172560e-48 | -8.615850e-47 |
| Msa0559890 | Msa1373380 | 0.834922 | 2.264996e-56 | -8.615850e-47 |
| Msa0569930 | Msa1373380 | 0.802433 | 5.624036e-49 | -8.615850e-47 |
| Msa0577230 | Msa1373380 | 0.804127 | 2.507885e-49 | -8.615850e-47 |
| Msa0579610 | Msa1373380 | 0.843733 | 1.168617e-58 | -8.615850e-47 |
| Msa0581190 | Msa1373380 | 0.802312 | 5.955964e-49 | -8.615850e-47 |
| Msa0583930 | Msa1373380 | 0.801144 | 1.034061e-48 | -8.615850e-47 |
| Msa0587900 | Msa1373380 | 0.846627 | 1.929196e-59 | -8.615850e-47 |
| Msa0589290 | Msa1373380 | 0.850073 | 2.148919e-60 | -8.615850e-47 |
| Msa0600820 | Msa1373380 | 0.808629 | 2.818984e-50 | -8.615850e-47 |
| Msa0848760 | Msa1373380 | 0.805712 | 1.169629e-49 | -8.615850e-47 |
| Msa0851740 | Msa1373380 | 0.800727 | 1.258638e-48 | -8.615850e-47 |
| Msa0853920 | Msa1373380 | 0.826010 | 3.430108e-54 | -8.615850e-47 |
| Msa0863250 | Msa1373380 | 0.833649 | 4.724853e-56 | -8.615850e-47 |
| Msa0882700 | Msa1373380 | 0.811302 | 7.493944e-51 | -8.615850e-47 |
| Msa0901140 | Msa1373380 | 0.819511 | 1.117716e-52 | -8.615850e-47 |
| Msa0929940 | Msa1373380 | 0.825762 | 3.928736e-54 | -8.615850e-47 |
| Msa0931730 | Msa1373380 | 0.812462 | 4.188372e-51 | -8.615850e-47 |
| Msa0934830 | Msa1373380 | 0.817632 | 2.981962e-52 | -8.615850e-47 |
| Msa0937940 | Msa1373380 | 0.801388 | 9.220722e-49 | -8.615850e-47 |
| Msa0966410 | Msa1373380 | 0.821885 | 3.183376e-53 | -8.615850e-47 |
| Msa0968780 | Msa1373380 | 0.835053 | 2.099221e-56 | -8.615850e-47 |
| Msa0970050 | Msa1373380 | 0.816107 | 6.558586e-52 | -8.615850e-47 |
| Msa0975080 | Msa1373380 | 0.823969 | 1.040259e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373380 | MtrunA17_Chr1g0213311 | 97.015 | 402 | 11 | 1 | 1 | 401 | 1 | 402 | 0.0 | 808 |
| Msa1373380 | MtrunA17_Chr7g0214501 | 49.835 | 303 | 93 | 6 | 85 | 381 | 1 | 250 | 3.50e-77 | 241 |
| Msa1373380 | MtrunA17_Chr3g0079841 | 44.690 | 226 | 104 | 5 | 24 | 247 | 29 | 235 | 3.80e-52 | 175 |
| Msa1373380 | MtrunA17_Chr3g0143581 | 51.064 | 141 | 66 | 2 | 23 | 162 | 19 | 157 | 1.74e-43 | 149 |
| Msa1373380 | MtrunA17_Chr3g0143571 | 46.259 | 147 | 77 | 1 | 191 | 337 | 23 | 167 | 3.25e-34 | 125 |
| Msa1373380 | MtrunA17_Chr7g0214491 | 65.882 | 85 | 28 | 1 | 1 | 84 | 1 | 85 | 6.05e-34 | 122 |
| Msa1373380 | MtrunA17_Chr5g0435401 | 22.662 | 278 | 181 | 8 | 66 | 320 | 70 | 336 | 3.19e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1373380 | AT1G04880.1 | 60.000 | 380 | 114 | 11 | 1 | 362 | 1 | 360 | 1.33e-134 | 393 |
| Msa1373380 | AT1G76110.1 | 44.643 | 336 | 162 | 8 | 2 | 334 | 12 | 326 | 9.28e-85 | 262 |
| Msa1373380 | AT3G13350.1 | 45.545 | 303 | 133 | 4 | 29 | 330 | 34 | 305 | 1.76e-82 | 255 |
| Msa1373380 | AT1G55650.1 | 36.562 | 320 | 154 | 7 | 12 | 330 | 11 | 282 | 1.75e-60 | 199 |
Find 112 sgRNAs with CRISPR-Local
Find 367 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCACTTCTGTTTGGTTT+TGG | 0.220656 | tig0019430:-90576 | None:intergenic |
| ATTGCAGGATTCCTGTTATT+GGG | 0.246287 | tig0019430:+87739 | Msa1373380:intron |
| CACAGTGATCAACTGGGTTT+TGG | 0.268345 | tig0019430:+91453 | Msa1373380:three_prime_UTR |
| TATTGCAGGATTCCTGTTAT+TGG | 0.282044 | tig0019430:+87738 | Msa1373380:intron |
| TGTGGATTCATTGCCTGTTA+TGG | 0.326537 | tig0019430:+91273 | Msa1373380:CDS |
| GAAGCATTTGTAGCCGTTGA+TGG | 0.327945 | tig0019430:-88242 | None:intergenic |
| AATAATAGATTTGTTCATAA+TGG | 0.330253 | tig0019430:-88301 | None:intergenic |
| GTACCTCTCTTTGTCCTTCA+CGG | 0.336959 | tig0019430:-91050 | None:intergenic |
| TCAGTTTGAGGTGTTTGTTT+TGG | 0.337746 | tig0019430:+91487 | Msa1373380:three_prime_UTR |
| CACAAATCACAGTGATCAAC+TGG | 0.338301 | tig0019430:+91446 | Msa1373380:three_prime_UTR |
| GTATGTGAAAACTGCATCTT+TGG | 0.346993 | tig0019430:-88478 | None:intergenic |
| GTGGATTCATTGCCTGTTAT+GGG | 0.359014 | tig0019430:+91274 | Msa1373380:CDS |
| CGGCAGGATCTCAGGTTGTC+GGG | 0.362545 | tig0019430:+90340 | Msa1373380:CDS |
| AGAAAGAAGAAATGTTAGCT+AGG | 0.370972 | tig0019430:+91335 | Msa1373380:three_prime_UTR |
| TTCCGCGTCTGATCTCTAAA+TGG | 0.372840 | tig0019430:+91566 | Msa1373380:three_prime_UTR |
| AGATCATTAAAGATAGAAAA+TGG | 0.378478 | tig0019430:+88192 | Msa1373380:intron |
| GCTCAAAGCTGTCTCTTTCA+TGG | 0.381404 | tig0019430:-87427 | None:intergenic |
| GCATTCAACATGTCAGTATC+TGG | 0.384305 | tig0019430:-91160 | None:intergenic |
| TGCATCTTTGGAGCAGGAGC+TGG | 0.387029 | tig0019430:-88466 | None:intergenic |
| CAGGTTGTCGGGGTCATTGA+TGG | 0.395002 | tig0019430:+90351 | Msa1373380:CDS |
| GCTGAATATATGATCCTAAC+AGG | 0.396426 | tig0019430:+91529 | Msa1373380:three_prime_UTR |
| TATCTAGTTACTGTCACAAT+TGG | 0.419081 | tig0019430:+90390 | Msa1373380:CDS |
| ATCTGTTTCAGCATCCTGTT+AGG | 0.421335 | tig0019430:-91543 | None:intergenic |
| TCAGCACCAACTCCCATAAC+AGG | 0.424034 | tig0019430:-91286 | None:intergenic |
| AAATTGTATCCACTTCTGTT+TGG | 0.426908 | tig0019430:-90582 | None:intergenic |
| CTCAGCAATGGGATCATCTT+CGG | 0.429472 | tig0019430:+90320 | Msa1373380:intron |
| TCATTGCCTGTTATGGGAGT+TGG | 0.435413 | tig0019430:+91280 | Msa1373380:CDS |
| ATCATCTTCGGCAGGATCTC+AGG | 0.435568 | tig0019430:+90332 | Msa1373380:CDS |
| ATTGATGGGAAATTTGATAG+TGG | 0.443834 | tig0019430:+90366 | Msa1373380:CDS |
| GAAAGAAGAAATGTTAGCTA+GGG | 0.444580 | tig0019430:+91336 | Msa1373380:three_prime_UTR |
| CTGTGATTTGTGCTTAAAGT+AGG | 0.451073 | tig0019430:-91435 | None:intergenic |
| AGAGAGGTACATAACAGAAA+TGG | 0.452384 | tig0019430:+91063 | Msa1373380:CDS |
| TCGGCAGGATCTCAGGTTGT+CGG | 0.453538 | tig0019430:+90339 | Msa1373380:CDS |
| TGTTAGCTAGGGAATGGAAT+AGG | 0.454932 | tig0019430:+91347 | Msa1373380:three_prime_UTR |
| TGTTGTTAGCAGGAACACTA+TGG | 0.456419 | tig0019430:-90476 | None:intergenic |
| GCTGTCTCTTTCATGGGTAA+TGG | 0.461532 | tig0019430:-87420 | None:intergenic |
| CAAGCTCTTCATACTTAGCT+TGG | 0.463066 | tig0019430:+87503 | Msa1373380:CDS |
| GAACATACCGGAAGTTGTAT+TGG | 0.464656 | tig0019430:-88342 | None:intergenic |
| TCATTCATTCATTGGCATCT+CGG | 0.469847 | tig0019430:+85868 | None:intergenic |
| TGGTGGGATGCTGGCAGCAC+AGG | 0.472613 | tig0019430:-90456 | None:intergenic |
| AACTGGACCAATACAACTTC+CGG | 0.475197 | tig0019430:+88335 | Msa1373380:CDS |
| AGTTACTGTCACAATTGGTT+CGG | 0.475294 | tig0019430:+90395 | Msa1373380:CDS |
| GGAAGGACCGAGAGATTAGT+AGG | 0.477594 | tig0019430:+90649 | Msa1373380:CDS |
| TTCACCTATGGCAACATATG+AGG | 0.483062 | tig0019430:+87464 | Msa1373380:CDS |
| AACATGTCAGTATCTGGTTC+AGG | 0.486501 | tig0019430:-91154 | None:intergenic |
| GCGGTCACGTTGTTGTTAGC+AGG | 0.489436 | tig0019430:-90486 | None:intergenic |
| CAAGCTAAGTATGAAGAGCT+TGG | 0.497014 | tig0019430:-87502 | None:intergenic |
| CTTTGGAGCAGGAGCTGGGA+TGG | 0.499860 | tig0019430:-88461 | None:intergenic |
| GGAACACTATGGTGGGATGC+TGG | 0.501068 | tig0019430:-90465 | None:intergenic |
| TTTAACTGTTGAAAGACAGC+TGG | 0.504737 | tig0019430:-88517 | None:intergenic |
| CCAGGGAGCCTACATGAACT+TGG | 0.508162 | tig0019430:-87550 | None:intergenic |
| TGATGACTATGAAGATGATA+AGG | 0.508495 | tig0019430:+91231 | Msa1373380:CDS |
| GTGTCCATCGTCGCCGACGC+AGG | 0.509894 | tig0019430:+90517 | Msa1373380:CDS |
| TTTGTTGAAGTGACTTCTCG+TGG | 0.510774 | tig0019430:+87789 | Msa1373380:CDS |
| GGAGAAGCTCCACACTCTCA+TGG | 0.512213 | tig0019430:+87524 | Msa1373380:CDS |
| AAGAAATGTTAGCTAGGGAA+TGG | 0.514183 | tig0019430:+91341 | Msa1373380:three_prime_UTR |
| AAGCTAAGTATGAAGAGCTT+GGG | 0.516105 | tig0019430:-87501 | None:intergenic |
| CGGTCCTTCCCTCGGTGAAG+AGG | 0.519858 | tig0019430:-90636 | None:intergenic |
| GCATCTTTGGAGCAGGAGCT+GGG | 0.522935 | tig0019430:-88465 | None:intergenic |
| CGAGAGATTAGTAGGACCAT+TGG | 0.525975 | tig0019430:+90657 | Msa1373380:CDS |
| TGGTGAATATCCTTCACCTA+TGG | 0.528306 | tig0019430:+87452 | Msa1373380:CDS |
| TTGCAGGATTCCTGTTATTG+GGG | 0.528895 | tig0019430:+87740 | Msa1373380:intron |
| TGAATATATTAAGTTGTGAA+TGG | 0.532675 | tig0019430:+87371 | Msa1373380:exon |
| TAATCTCTCGGTCCTTCCCT+CGG | 0.534837 | tig0019430:-90644 | None:intergenic |
| GAAAACTGCATCTTTGGAGC+AGG | 0.538241 | tig0019430:-88472 | None:intergenic |
| CTCAAAGCTGTCTCTTTCAT+GGG | 0.539064 | tig0019430:-87426 | None:intergenic |
| TCTTCCTGCGTCGGCGACGA+TGG | 0.540297 | tig0019430:-90521 | None:intergenic |
| TTGAAGTGACTTCTCGTGGA+GGG | 0.541093 | tig0019430:+87793 | Msa1373380:CDS |
| CCGTCTGAACTACTCTGCTC+CGG | 0.545473 | tig0019430:-91205 | None:intergenic |
| GATCATTCTTCAACTTCTCA+CGG | 0.547465 | tig0019430:-91093 | None:intergenic |
| CAATGGTCCTACTAATCTCT+CGG | 0.547885 | tig0019430:-90656 | None:intergenic |
| GTTAATTCTGCTCCGCCTGA+AGG | 0.550930 | tig0019430:+88541 | Msa1373380:CDS |
| GTAGGACCATTGGTGAACTC+TGG | 0.551646 | tig0019430:+90667 | Msa1373380:CDS |
| CACCCAAAACCAAACAGAAG+TGG | 0.557660 | tig0019430:+90573 | Msa1373380:CDS |
| AGGTTGTCGGGGTCATTGAT+GGG | 0.564891 | tig0019430:+90352 | Msa1373380:CDS |
| TCATATGTTGCCATAGGTGA+AGG | 0.568033 | tig0019430:-87462 | None:intergenic |
| TCTCTGATTTCTTCCTGCGT+CGG | 0.568830 | tig0019430:-90530 | None:intergenic |
| GGCAGACTCTCTTCAAACTC+CGG | 0.569431 | tig0019430:+91186 | Msa1373380:CDS |
| GAGAAGCTCCACACTCTCAT+GGG | 0.571795 | tig0019430:+87525 | Msa1373380:CDS |
| TCTTTGCAGAACAGCATCCA+AGG | 0.571889 | tig0019430:+90607 | Msa1373380:CDS |
| GCAATGGGATCATCTTCGGC+AGG | 0.580770 | tig0019430:+90324 | Msa1373380:intron |
| TCAGGAAATCGCTGTTGAAG+TGG | 0.581487 | tig0019430:-91136 | None:intergenic |
| AAAGAGACAGCTTTGAGCCA+TGG | 0.588397 | tig0019430:+87432 | Msa1373380:CDS |
| GGCTAAAACCTCTTCACCGA+GGG | 0.597780 | tig0019430:+90628 | Msa1373380:CDS |
| TGTTAGCAGGAACACTATGG+TGG | 0.605828 | tig0019430:-90473 | None:intergenic |
| ATTGTCAAAACTCAAATCAA+CGG | 0.606958 | tig0019430:+91635 | Msa1373380:three_prime_UTR |
| AAGACAGCTGGTTGAACTTG+TGG | 0.608568 | tig0019430:-88505 | None:intergenic |
| CCGGAGCAGAGTAGTTCAGA+CGG | 0.612929 | tig0019430:+91205 | Msa1373380:CDS |
| CTATGAAGATGATAAGGCGA+AGG | 0.615408 | tig0019430:+91237 | Msa1373380:CDS |
| TTATCAAGATAAAGCCGTGA+AGG | 0.616173 | tig0019430:+91036 | Msa1373380:CDS |
| GCTGAGACTTTGAGTTGCAG+TGG | 0.618681 | tig0019430:+91409 | Msa1373380:three_prime_UTR |
| CTTGTTCCAGAGTTCACCAA+TGG | 0.619707 | tig0019430:-90673 | None:intergenic |
| ACCTCCTCATATGTTGCCAT+AGG | 0.625420 | tig0019430:-87468 | None:intergenic |
| AAAACCTCTTCACCGAGGGA+AGG | 0.626858 | tig0019430:+90632 | Msa1373380:CDS |
| ACCTATGGCAACATATGAGG+AGG | 0.630539 | tig0019430:+87467 | Msa1373380:CDS |
| AACAACGTGACCGCCTCTGT+CGG | 0.631474 | tig0019430:+90495 | Msa1373380:CDS |
| GTTGAAGTGACTTCTCGTGG+AGG | 0.634997 | tig0019430:+87792 | Msa1373380:CDS |
| GGCAGGATCTCAGGTTGTCG+GGG | 0.638448 | tig0019430:+90341 | Msa1373380:CDS |
| TGCAGGATTCCTGTTATTGG+GGG | 0.639336 | tig0019430:+87741 | Msa1373380:intron |
| AAGCCGTGAAGGACAAAGAG+AGG | 0.641251 | tig0019430:+91047 | Msa1373380:CDS |
| ATTGGTTCGGAGAAACTCAA+AGG | 0.644223 | tig0019430:+90408 | Msa1373380:CDS |
| GCGACGATGGACACCGACAG+AGG | 0.659779 | tig0019430:-90508 | None:intergenic |
| TACTGACATGTTGAATGCTG+AGG | 0.661079 | tig0019430:+91165 | Msa1373380:CDS |
| GAGAAGTCACTTCAACAAAG+AGG | 0.662036 | tig0019430:-87785 | None:intergenic |
| ACTTGGTGCCCATGAGAGTG+TGG | 0.664789 | tig0019430:-87533 | None:intergenic |
| ACGATGGACACCGACAGAGG+CGG | 0.677611 | tig0019430:-90505 | None:intergenic |
| GCAAAGCAAAGACCTTCAGG+CGG | 0.704080 | tig0019430:-88553 | None:intergenic |
| ACAAATCACAGTGATCAACT+GGG | 0.709759 | tig0019430:+91447 | Msa1373380:three_prime_UTR |
| GACCATTTAGAGATCAGACG+CGG | 0.710134 | tig0019430:-91568 | None:intergenic |
| TAGGTGAAGGATATTCACCA+TGG | 0.732815 | tig0019430:-87449 | None:intergenic |
| AGGCTAAAACCTCTTCACCG+AGG | 0.737163 | tig0019430:+90627 | Msa1373380:CDS |
| GTTAGCAGGAACACTATGGT+GGG | 0.739497 | tig0019430:-90472 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTAAAAAAAAAAAT+GGG | - | tig0019430:86643-86662 | None:intergenic | 0.0% |
| !!! | ATTTTTTTTAAAAAAAAAAA+TGG | - | tig0019430:86644-86663 | None:intergenic | 0.0% |
| !!! | TTTTTAAAAAAAATTTATTT+TGG | + | tig0019430:86650-86669 | Msa1373380:intron | 0.0% |
| !!! | TTTTAATTTAAGAGAAATAA+AGG | - | tig0019430:85924-85943 | None:intergenic | 10.0% |
| !!! | CTTTTATTTATTTATTAACA+TGG | + | tig0019430:86194-86213 | Msa1373380:intron | 10.0% |
| !!! | CCTATTTGTATATTTTTTAA+CGG | + | tig0019430:85893-85912 | Msa1373380:five_prime_UTR | 15.0% |
| !! | TTAGTACTTTATTAAAATAG+TGG | + | tig0019430:85960-85979 | Msa1373380:intron | 15.0% |
| !! | ATAATAATAATAAAGTAAGC+AGG | - | tig0019430:86055-86074 | None:intergenic | 15.0% |
| !! | TACTTTCAACAAAAAAAAAA+AGG | + | tig0019430:86280-86299 | Msa1373380:intron | 15.0% |
| !! | AAAAACATTAATGAGAATAA+TGG | - | tig0019430:87188-87207 | None:intergenic | 15.0% |
| !!! | TTTACTTTTATTTTAAGATG+TGG | + | tig0019430:87607-87626 | Msa1373380:intron | 15.0% |
| !!! | GATTATAATTTCAATTTTGT+TGG | + | tig0019430:87834-87853 | Msa1373380:intron | 15.0% |
| !!! | AATAATAGATTTGTTCATAA+TGG | - | tig0019430:88304-88323 | None:intergenic | 15.0% |
| !!! | TTAGTAGTTAATCTTATTTT+GGG | - | tig0019430:88588-88607 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTGAGAATATTTT+AGG | + | tig0019430:88635-88654 | Msa1373380:intron | 15.0% |
| !! | AAAAAAACATACAAAAGATT+AGG | - | tig0019430:90211-90230 | None:intergenic | 15.0% |
| !! | ATAAACAATACTAGTTATTA+TGG | - | tig0019430:90289-90308 | None:intergenic | 15.0% |
| !! | CCGTTAAAAAATATACAAAT+AGG | - | tig0019430:85896-85915 | None:intergenic | 20.0% |
| !! | TAAAAGATAAAAATAACGTG+TGG | - | tig0019430:86180-86199 | None:intergenic | 20.0% |
| !! | ACATTATCATGTGTTAATTT+AGG | - | tig0019430:86224-86243 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAGGTCAAGTTTT+TGG | + | tig0019430:86292-86311 | Msa1373380:intron | 20.0% |
| !!! | GTAAATAAATTAGTCTACTT+TGG | - | tig0019430:86444-86463 | None:intergenic | 20.0% |
| !! | TAGACTAATTTATTTACTGT+AGG | + | tig0019430:86447-86466 | Msa1373380:intron | 20.0% |
| !!! | AAATTTATTTTGGTAAGCAT+AGG | + | tig0019430:86660-86679 | Msa1373380:intron | 20.0% |
| !! | AACAAAACAGAAAAGAAAAA+AGG | - | tig0019430:87030-87049 | None:intergenic | 20.0% |
| !! | AAAAGGTAAAACAAACAAAA+AGG | - | tig0019430:87316-87335 | None:intergenic | 20.0% |
| !!! | TGAATATATTAAGTTGTGAA+TGG | + | tig0019430:87371-87390 | Msa1373380:exon | 20.0% |
| !! | TTGCAATTACAAAAAACATT+TGG | + | tig0019430:87710-87729 | Msa1373380:intron | 20.0% |
| !!! | ATTCTTTTGAATCATAACTT+TGG | + | tig0019430:88110-88129 | Msa1373380:intron | 20.0% |
| !! | AGATCATTAAAGATAGAAAA+TGG | + | tig0019430:88192-88211 | Msa1373380:intron | 20.0% |
| !! | TTCCAATTTATACATTAGAA+GGG | - | tig0019430:88405-88424 | None:intergenic | 20.0% |
| !! | TTTCCAATTTATACATTAGA+AGG | - | tig0019430:88406-88425 | None:intergenic | 20.0% |
| !! | ATAAATTGGAAATTTCACTA+TGG | + | tig0019430:88414-88433 | Msa1373380:intron | 20.0% |
| !!! | GTTAGTAGTTAATCTTATTT+TGG | - | tig0019430:88589-88608 | None:intergenic | 20.0% |
| !! | TTAGGTTATGTTTAAATTGA+TGG | + | tig0019430:88653-88672 | Msa1373380:intron | 20.0% |
| !! | TTATGTTTAAATTGATGGAA+AGG | + | tig0019430:88658-88677 | Msa1373380:intron | 20.0% |
| !! | TATGTTTAAATTGATGGAAA+GGG | + | tig0019430:88659-88678 | Msa1373380:intron | 20.0% |
| !! | TCATTATTTGAGAATTGAAA+TGG | - | tig0019430:89040-89059 | None:intergenic | 20.0% |
| !! | TCAATTCTCAAATAATGAAA+TGG | + | tig0019430:89042-89061 | Msa1373380:intron | 20.0% |
| !!! | TAGTTTTCAATCTAGATATA+TGG | + | tig0019430:89166-89185 | Msa1373380:intron | 20.0% |
| !! | TATTATGAGCTTACATTTAA+TGG | + | tig0019430:89433-89452 | Msa1373380:intron | 20.0% |
| !! | ATTATGAGCTTACATTTAAT+GGG | + | tig0019430:89434-89453 | Msa1373380:intron | 20.0% |
| !! | CAATCCTATATTAAGTTTAA+AGG | - | tig0019430:90069-90088 | None:intergenic | 20.0% |
| ! | TAATAATAAAGTAAGCAGGA+AGG | - | tig0019430:86051-86070 | None:intergenic | 25.0% |
| ! | GGATTCATTGATCTTTAAAT+CGG | + | tig0019430:86614-86633 | Msa1373380:intron | 25.0% |
| ! | ATTACCATAGCGTAAATAAA+AGG | + | tig0019430:86745-86764 | Msa1373380:intron | 25.0% |
| ! | TTACCATAGCGTAAATAAAA+GGG | + | tig0019430:86746-86765 | Msa1373380:intron | 25.0% |
| !!! | GTTTTGTTTTGTTTTCTTCA+AGG | + | tig0019430:87047-87066 | Msa1373380:intron | 25.0% |
| !! | AAGAAACAGACAAGTTTTTA+AGG | - | tig0019430:87114-87133 | None:intergenic | 25.0% |
| ! | AACAAACAAAAAGGAGAAAT+AGG | - | tig0019430:87307-87326 | None:intergenic | 25.0% |
| !! | GTTTTACCTTTTCTTGTTAA+TGG | + | tig0019430:87324-87343 | Msa1373380:intron | 25.0% |
| ! | ATTCGTAGTTTATAAATCCA+GGG | - | tig0019430:87570-87589 | None:intergenic | 25.0% |
| ! | AATTCGTAGTTTATAAATCC+AGG | - | tig0019430:87571-87590 | None:intergenic | 25.0% |
| ! | TGCAAAGTTATACAAGTAAA+TGG | - | tig0019430:87695-87714 | None:intergenic | 25.0% |
| !!! | AACATTTGGAATTTTATTGC+AGG | + | tig0019430:87724-87743 | Msa1373380:intron | 25.0% |
| !! | ACTGATAATGTCCAAAATAT+AGG | + | tig0019430:87904-87923 | Msa1373380:intron | 25.0% |
| !! | AGTTTTCAATTTTCCATCAA+CGG | + | tig0019430:88229-88248 | Msa1373380:CDS | 25.0% |
| ! | TCCAATTTATACATTAGAAG+GGG | - | tig0019430:88404-88423 | None:intergenic | 25.0% |
| !! | TTCAATTTCCTTTTTCTTAG+TGG | - | tig0019430:88611-88630 | None:intergenic | 25.0% |
| ! | ATGTTTAAATTGATGGAAAG+GGG | + | tig0019430:88660-88679 | Msa1373380:intron | 25.0% |
| ! | TCAAATTTCACTACTCTATA+GGG | - | tig0019430:88890-88909 | None:intergenic | 25.0% |
| ! | TTCAAATTTCACTACTCTAT+AGG | - | tig0019430:88891-88910 | None:intergenic | 25.0% |
| !! | TGCTATTTAGTACAAAATAG+CGG | + | tig0019430:88934-88953 | Msa1373380:intron | 25.0% |
| !! | TAAGTCAATTTTATCAATGG+AGG | - | tig0019430:89013-89032 | None:intergenic | 25.0% |
| !! | AGGTAAGTCAATTTTATCAA+TGG | - | tig0019430:89016-89035 | None:intergenic | 25.0% |
| ! | TATTTGAGAATTGAAATGGT+AGG | - | tig0019430:89036-89055 | None:intergenic | 25.0% |
| ! | ATTGTTTGATTGTTTCATTG+AGG | - | tig0019430:89078-89097 | None:intergenic | 25.0% |
| ! | TCAATGAAACAATCAAACAA+TGG | + | tig0019430:89077-89096 | Msa1373380:intron | 25.0% |
| ! | AAACAATCAAACAATGGAAT+AGG | + | tig0019430:89083-89102 | Msa1373380:intron | 25.0% |
| ! | AACAATCAAACAATGGAATA+GGG | + | tig0019430:89084-89103 | Msa1373380:intron | 25.0% |
| ! | CTATTTAACGATTAGAGAAA+TGG | - | tig0019430:89149-89168 | None:intergenic | 25.0% |
| ! | TAATATAGTATCTTTCTCCT+AGG | + | tig0019430:89206-89225 | Msa1373380:intron | 25.0% |
| !! | ATGATTTTCCATGACTTAAT+CGG | + | tig0019430:89230-89249 | Msa1373380:intron | 25.0% |
| !! | TGATGGTCTTTTAAATCTAT+TGG | + | tig0019430:89267-89286 | Msa1373380:intron | 25.0% |
| !!! | TGCCTTATTTTATCATCAAA+AGG | + | tig0019430:89383-89402 | Msa1373380:intron | 25.0% |
| !!! | GTCCTTTTGATGATAAAATA+AGG | - | tig0019430:89388-89407 | None:intergenic | 25.0% |
| !!! | TAGGTAAATGTTAGTTTTCA+AGG | + | tig0019430:89546-89565 | Msa1373380:intron | 25.0% |
| !!! | AAGGAAGTTTTGTTTTCATT+TGG | - | tig0019430:89685-89704 | None:intergenic | 25.0% |
| !! | TGTAAGATTTGTGCTATTAT+AGG | - | tig0019430:89797-89816 | None:intergenic | 25.0% |
| !!! | ACATTTTAAGTTTAGTATCG+TGG | + | tig0019430:89814-89833 | Msa1373380:intron | 25.0% |
| !!! | AAAAGTACTAGAGTGAAAAT+TGG | + | tig0019430:89887-89906 | Msa1373380:intron | 25.0% |
| !! | AAAGTACTAGAGTGAAAATT+GGG | + | tig0019430:89888-89907 | Msa1373380:intron | 25.0% |
| ! | ACATTTATCACTAAATCTCT+CGG | - | tig0019430:90042-90061 | None:intergenic | 25.0% |
| ! | TCCACCTTTAAACTTAATAT+AGG | + | tig0019430:90062-90081 | Msa1373380:intron | 25.0% |
| ! | TCCTATATTAAGTTTAAAGG+TGG | - | tig0019430:90066-90085 | None:intergenic | 25.0% |
| ! | AATAGAAAGAATGGTTAACA+GGG | - | tig0019430:90176-90195 | None:intergenic | 25.0% |
| ! | AAATAGAAAGAATGGTTAAC+AGG | - | tig0019430:90177-90196 | None:intergenic | 25.0% |
| !! | GTTAACCATTCTTTCTATTT+TGG | + | tig0019430:90177-90196 | Msa1373380:intron | 25.0% |
| !!! | ATTCTTTCTATTTTGGAAGT+GGG | + | tig0019430:90184-90203 | Msa1373380:intron | 25.0% |
| ! | ATAACAGTAAGAGAAGTTAT+AGG | - | tig0019430:90261-90280 | None:intergenic | 25.0% |
| !! | TTAACACATCTTTTATGAGT+TGG | + | tig0019430:90730-90749 | Msa1373380:intron | 25.0% |
| ! | TAAGTAATCTCTAATCTATC+TGG | + | tig0019430:90836-90855 | Msa1373380:intron | 25.0% |
| ! | TCTTGATAAACCTTAAATGT+TGG | - | tig0019430:91025-91044 | None:intergenic | 25.0% |
| ! | ATTGTCAAAACTCAAATCAA+CGG | + | tig0019430:91635-91654 | Msa1373380:three_prime_UTR | 25.0% |
| ATAAAAATAACGTGTGGTGT+GGG | - | tig0019430:86174-86193 | None:intergenic | 30.0% | |
| TGACCTCTTTGTATTGTAAA+TGG | + | tig0019430:86567-86586 | Msa1373380:intron | 30.0% | |
| TGTCCATTTACAATACAAAG+AGG | - | tig0019430:86573-86592 | None:intergenic | 30.0% | |
| TTGTAAATGGACAATGAGAT+TGG | + | tig0019430:86580-86599 | Msa1373380:intron | 30.0% | |
| ! | ATGAGATTGGTCATATCATA+TGG | + | tig0019430:86593-86612 | Msa1373380:intron | 30.0% |
| !!! | TTATTTTGGTAAGCATAGGT+AGG | + | tig0019430:86664-86683 | Msa1373380:intron | 30.0% |
| TAACTAGCAGTAAGAAGAAA+GGG | - | tig0019430:86934-86953 | None:intergenic | 30.0% | |
| ATAACTAGCAGTAAGAAGAA+AGG | - | tig0019430:86935-86954 | None:intergenic | 30.0% | |
| !! | TGCTGATTCATTCATTTCAT+TGG | + | tig0019430:87002-87021 | Msa1373380:intron | 30.0% |
| !! | TTTTTGTTGTCTGCATGTAT+AGG | + | tig0019430:87159-87178 | Msa1373380:intron | 30.0% |
| ! | TTTTCCCTATCTACAAATAC+TGG | + | tig0019430:87209-87228 | Msa1373380:intron | 30.0% |
| ! | TTACCTTTTCTTGTTAATGG+TGG | + | tig0019430:87327-87346 | Msa1373380:intron | 30.0% |
| ACGAATTAGATATTGTGACT+TGG | + | tig0019430:87584-87603 | Msa1373380:intron | 30.0% | |
| ! | ATTTTGTTGGTATGAATGCA+TGG | + | tig0019430:87847-87866 | Msa1373380:intron | 30.0% |
| CTACATATTCACACAATGTT+TGG | - | tig0019430:87882-87901 | None:intergenic | 30.0% | |
| !!! | TTTGGTTTTTCCTACATGTT+TGG | + | tig0019430:88128-88147 | Msa1373380:intron | 30.0% |
| !!! | ATTATTTTAAAGCTCGCAAC+TGG | + | tig0019430:88318-88337 | Msa1373380:CDS | 30.0% |
| ACTACTAACCACTAAGAAAA+AGG | + | tig0019430:88600-88619 | Msa1373380:intron | 30.0% | |
| ! | TTGTTTGGATTGTCTGAAAT+AGG | + | tig0019430:88694-88713 | Msa1373380:intron | 30.0% |
| GGTTAAAAACTATAGAGATG+TGG | - | tig0019430:88757-88776 | None:intergenic | 30.0% | |
| ! | CTCTATAGTTTTTAACCTGT+CGG | + | tig0019430:88760-88779 | Msa1373380:intron | 30.0% |
| ! | TCTATAGTTTTTAACCTGTC+GGG | + | tig0019430:88761-88780 | Msa1373380:intron | 30.0% |
| TAATTAACAACAGTAGGGTA+GGG | - | tig0019430:88846-88865 | None:intergenic | 30.0% | |
| TTGTTAATTAGTGGCTACAT+CGG | + | tig0019430:88856-88875 | Msa1373380:intron | 30.0% | |
| TTAGAGAAATGGAATCAGAA+AGG | - | tig0019430:89138-89157 | None:intergenic | 30.0% | |
| TGTATATTCCGATTAAGTCA+TGG | - | tig0019430:89241-89260 | None:intergenic | 30.0% | |
| ! | CGGAATATACATGATTTTGA+TGG | + | tig0019430:89250-89269 | Msa1373380:intron | 30.0% |
| CATTAAGATGAATGAGTTGT+CGG | + | tig0019430:89845-89864 | Msa1373380:intron | 30.0% | |
| AAGTACTAGAGTGAAAATTG+GGG | + | tig0019430:89889-89908 | Msa1373380:intron | 30.0% | |
| TAAAGGATATTCCAATAGTC+AGG | + | tig0019430:89991-90010 | Msa1373380:intron | 30.0% | |
| AAAGGATATTCCAATAGTCA+GGG | + | tig0019430:89992-90011 | Msa1373380:intron | 30.0% | |
| GTATAGGGTTTGATATATGT+TGG | + | tig0019430:90134-90153 | Msa1373380:intron | 30.0% | |
| CACTTCCAAAATAGAAAGAA+TGG | - | tig0019430:90185-90204 | None:intergenic | 30.0% | |
| !! | CATTCTTTCTATTTTGGAAG+TGG | + | tig0019430:90183-90202 | Msa1373380:intron | 30.0% |
| ATTGATGGGAAATTTGATAG+TGG | + | tig0019430:90366-90385 | Msa1373380:CDS | 30.0% | |
| TATCTAGTTACTGTCACAAT+TGG | + | tig0019430:90390-90409 | Msa1373380:CDS | 30.0% | |
| AAATTGTATCCACTTCTGTT+TGG | - | tig0019430:90585-90604 | None:intergenic | 30.0% | |
| CAATAGTTCTTAGACCAAAT+AGG | - | tig0019430:90808-90827 | None:intergenic | 30.0% | |
| AAATTAGAGAATGATAGCTC+AGG | + | tig0019430:90889-90908 | Msa1373380:intron | 30.0% | |
| AATTAGAGAATGATAGCTCA+GGG | + | tig0019430:90890-90909 | Msa1373380:intron | 30.0% | |
| AAGCTCAGATATGCATTATT+TGG | + | tig0019430:90958-90977 | Msa1373380:intron | 30.0% | |
| ! | TTAAGTTGCACCAACATTTA+AGG | + | tig0019430:91012-91031 | Msa1373380:intron | 30.0% |
| TGATGACTATGAAGATGATA+AGG | + | tig0019430:91231-91250 | Msa1373380:CDS | 30.0% | |
| AGAAAGAAGAAATGTTAGCT+AGG | + | tig0019430:91335-91354 | Msa1373380:three_prime_UTR | 30.0% | |
| GAAAGAAGAAATGTTAGCTA+GGG | + | tig0019430:91336-91355 | Msa1373380:three_prime_UTR | 30.0% | |
| !! | GCATTTTAGTATTCAGTTTG+AGG | + | tig0019430:91475-91494 | Msa1373380:three_prime_UTR | 30.0% |
| GATAAAAATAACGTGTGGTG+TGG | - | tig0019430:86175-86194 | None:intergenic | 35.0% | |
| CAATGCAGGTCAATAATGAA+AGG | - | tig0019430:86250-86269 | None:intergenic | 35.0% | |
| CTTTCATTATTGACCTGCAT+TGG | + | tig0019430:86248-86267 | Msa1373380:intron | 35.0% | |
| AGTAAATTCATGTCCAATGC+AGG | - | tig0019430:86264-86283 | None:intergenic | 35.0% | |
| ! | AGGGTAAAAAGGATTTTGTG+GGG | - | tig0019430:86342-86361 | None:intergenic | 35.0% |
| ! | CAGGGTAAAAAGGATTTTGT+GGG | - | tig0019430:86343-86362 | None:intergenic | 35.0% |
| ! | TCAGGGTAAAAAGGATTTTG+TGG | - | tig0019430:86344-86363 | None:intergenic | 35.0% |
| TCTAATCTGACACTGTTTCA+GGG | - | tig0019430:86361-86380 | None:intergenic | 35.0% | |
| ATCTAATCTGACACTGTTTC+AGG | - | tig0019430:86362-86381 | None:intergenic | 35.0% | |
| GTTCTTTGCTACTAAACCAT+AGG | + | tig0019430:86414-86433 | Msa1373380:intron | 35.0% | |
| TAGTATAGGTCTAAACCACA+TGG | + | tig0019430:86477-86496 | Msa1373380:intron | 35.0% | |
| ACACATAGATACAATCCATG+TGG | - | tig0019430:86495-86514 | None:intergenic | 35.0% | |
| TTACAATACAAAGAGGTCAC+AGG | - | tig0019430:86566-86585 | None:intergenic | 35.0% | |
| !! | AGACCCTTTTATTTACGCTA+TGG | - | tig0019430:86752-86771 | None:intergenic | 35.0% |
| ! | ACCTTTTCTGTACCTTTTCT+TGG | + | tig0019430:86887-86906 | Msa1373380:intron | 35.0% |
| ! | CCTTTTCTGTACCTTTTCTT+GGG | + | tig0019430:86888-86907 | Msa1373380:intron | 35.0% |
| ATGATACATAGCCCAAGAAA+AGG | - | tig0019430:86902-86921 | None:intergenic | 35.0% | |
| CCATCCAGTATTTGTAGATA+GGG | - | tig0019430:87216-87235 | None:intergenic | 35.0% | |
| ACCATCCAGTATTTGTAGAT+AGG | - | tig0019430:87217-87236 | None:intergenic | 35.0% | |
| AAGCTAAGTATGAAGAGCTT+GGG | - | tig0019430:87504-87523 | None:intergenic | 35.0% | |
| TATTGCAGGATTCCTGTTAT+TGG | + | tig0019430:87738-87757 | Msa1373380:intron | 35.0% | |
| ATTGCAGGATTCCTGTTATT+GGG | + | tig0019430:87739-87758 | Msa1373380:intron | 35.0% | |
| ATCACTACAACCAAACATGT+AGG | - | tig0019430:88141-88160 | None:intergenic | 35.0% | |
| AGTGATACAGTTACCTTATC+TGG | + | tig0019430:88155-88174 | Msa1373380:intron | 35.0% | |
| CAAGACAGATTAACCAGATA+AGG | - | tig0019430:88171-88190 | None:intergenic | 35.0% | |
| TGTAGTTCCAATGAACATAC+CGG | - | tig0019430:88357-88376 | None:intergenic | 35.0% | |
| !! | TTGCTGTTTGTACTAATGTC+AGG | + | tig0019430:88377-88396 | Msa1373380:intron | 35.0% |
| ! | TGCTGTTTGTACTAATGTCA+GGG | + | tig0019430:88378-88397 | Msa1373380:intron | 35.0% |
| GCCCCTTCTAATGTATAAAT+TGG | + | tig0019430:88400-88419 | Msa1373380:intron | 35.0% | |
| GTATGTGAAAACTGCATCTT+TGG | - | tig0019430:88481-88500 | None:intergenic | 35.0% | |
| TTTAACTGTTGAAAGACAGC+TGG | - | tig0019430:88520-88539 | None:intergenic | 35.0% | |
| ! | ATTGTCTGAAATAGGATGTG+AGG | + | tig0019430:88702-88721 | Msa1373380:intron | 35.0% |
| AAACTATAGAGATGTGGTGA+TGG | - | tig0019430:88751-88770 | None:intergenic | 35.0% | |
| ! | TTTTTAACCTGTCGGGATAT+TGG | + | tig0019430:88768-88787 | Msa1373380:intron | 35.0% |
| ! | TTTTAACCTGTCGGGATATT+GGG | + | tig0019430:88769-88788 | Msa1373380:intron | 35.0% |
| AATTAACAACAGTAGGGTAG+GGG | - | tig0019430:88845-88864 | None:intergenic | 35.0% | |
| CTAATTAACAACAGTAGGGT+AGG | - | tig0019430:88847-88866 | None:intergenic | 35.0% | |
| ACCCTACTGTTGTTAATTAG+TGG | + | tig0019430:88847-88866 | Msa1373380:intron | 35.0% | |
| GCCACTAATTAACAACAGTA+GGG | - | tig0019430:88851-88870 | None:intergenic | 35.0% | |
| AGCCACTAATTAACAACAGT+AGG | - | tig0019430:88852-88871 | None:intergenic | 35.0% | |
| TGGAGGATCAAGAAAAATAG+CGG | - | tig0019430:88996-89015 | None:intergenic | 35.0% | |
| GATTGTTTCATTGAGGAACT+AGG | - | tig0019430:89071-89090 | None:intergenic | 35.0% | |
| AGTCATGGAAAATCATTCCT+AGG | - | tig0019430:89226-89245 | None:intergenic | 35.0% | |
| ! | ACATAATTTGTCATCGTGCA+CGG | - | tig0019430:89360-89379 | None:intergenic | 35.0% |
| ATGAGCTTACATTTAATGGG+TGG | + | tig0019430:89437-89456 | Msa1373380:intron | 35.0% | |
| ! | TGAGCTTACATTTAATGGGT+GGG | + | tig0019430:89438-89457 | Msa1373380:intron | 35.0% |
| TATTGAAAAACCATCTCCCT+CGG | - | tig0019430:89528-89547 | None:intergenic | 35.0% | |
| !! | TTAGTTTTCAAGGTTTGCTC+AGG | + | tig0019430:89556-89575 | Msa1373380:intron | 35.0% |
| TTGTAAGACGTCACAATGTT+TGG | + | tig0019430:89582-89601 | Msa1373380:intron | 35.0% | |
| AGCAAGAAACTCACAGATTA+TGG | + | tig0019430:89749-89768 | Msa1373380:intron | 35.0% | |
| ! | TTGTGCTATTATAGGATCAC+AGG | - | tig0019430:89789-89808 | None:intergenic | 35.0% |
| TTGTCGGACAATATAGTACT+AGG | + | tig0019430:89861-89880 | Msa1373380:intron | 35.0% | |
| TCGTTACTAGTACTTACACA+TGG | - | tig0019430:89959-89978 | None:intergenic | 35.0% | |
| AACGAGAGTTGACTAGATAA+AGG | + | tig0019430:89974-89993 | Msa1373380:intron | 35.0% | |
| TAAATCTCTCGGTACTAGTT+TGG | - | tig0019430:90031-90050 | None:intergenic | 35.0% | |
| ATATCAAACCCTATACCACT+AGG | - | tig0019430:90130-90149 | None:intergenic | 35.0% | |
| AGTTACTGTCACAATTGGTT+CGG | + | tig0019430:90395-90414 | Msa1373380:CDS | 35.0% | |
| !!! | ATCCACTTCTGTTTGGTTTT+GGG | - | tig0019430:90578-90597 | None:intergenic | 35.0% |
| !! | TATCCACTTCTGTTTGGTTT+TGG | - | tig0019430:90579-90598 | None:intergenic | 35.0% |
| !!! | CTTACTGCTTTTTCTGATTC+AGG | - | tig0019430:90702-90721 | None:intergenic | 35.0% |
| CTGAATCAGAAAAAGCAGTA+AGG | + | tig0019430:90700-90719 | Msa1373380:intron | 35.0% | |
| TAGCTCAGGGATTAAATTAC+AGG | + | tig0019430:90903-90922 | Msa1373380:intron | 35.0% | |
| TTATCAAGATAAAGCCGTGA+AGG | + | tig0019430:91036-91055 | Msa1373380:CDS | 35.0% | |
| ! | AGAGAGGTACATAACAGAAA+TGG | + | tig0019430:91063-91082 | Msa1373380:CDS | 35.0% |
| GATCATTCTTCAACTTCTCA+CGG | - | tig0019430:91096-91115 | None:intergenic | 35.0% | |
| !! | GAAGGAGAAAGATTTTAGTG+TGG | + | tig0019430:91255-91274 | Msa1373380:CDS | 35.0% |
| AAGAAATGTTAGCTAGGGAA+TGG | + | tig0019430:91341-91360 | Msa1373380:three_prime_UTR | 35.0% | |
| ! | CTGTGATTTGTGCTTAAAGT+AGG | - | tig0019430:91438-91457 | None:intergenic | 35.0% |
| ACAAATCACAGTGATCAACT+GGG | + | tig0019430:91447-91466 | Msa1373380:three_prime_UTR | 35.0% | |
| !! | TCAGTTTGAGGTGTTTGTTT+TGG | + | tig0019430:91487-91506 | Msa1373380:three_prime_UTR | 35.0% |
| GCTGAATATATGATCCTAAC+AGG | + | tig0019430:91529-91548 | Msa1373380:three_prime_UTR | 35.0% | |
| ! | GGAAGGAGTATATGGGAAAA+AGG | - | tig0019430:86034-86053 | None:intergenic | 40.0% |
| ! | GTAAGCAGGAAGGAGTATAT+GGG | - | tig0019430:86041-86060 | None:intergenic | 40.0% |
| ! | AGTAAGCAGGAAGGAGTATA+TGG | - | tig0019430:86042-86061 | None:intergenic | 40.0% |
| GACACTGTTTCAGGGTAAAA+AGG | - | tig0019430:86353-86372 | None:intergenic | 40.0% | |
| AGTCTACTTTGGTACTCCTA+TGG | - | tig0019430:86433-86452 | None:intergenic | 40.0% | |
| CTGTAGGTGCATAGTAGTAT+AGG | + | tig0019430:86463-86482 | Msa1373380:intron | 40.0% | |
| TGTGAACAGTGTCTTGGATT+AGG | + | tig0019430:86689-86708 | Msa1373380:intron | 40.0% | |
| GTGAACAGTGTCTTGGATTA+GGG | + | tig0019430:86690-86709 | Msa1373380:intron | 40.0% | |
| GATTAGGGAGAGACTAGAAA+AGG | + | tig0019430:86705-86724 | Msa1373380:intron | 40.0% | |
| GAGACTAGAAAAGGACTTTG+TGG | + | tig0019430:86714-86733 | Msa1373380:intron | 40.0% | |
| ! | TCAAAACCTCTGAGCTTTGA+TGG | + | tig0019430:86813-86832 | Msa1373380:intron | 40.0% |
| ! | CAAAACCTCTGAGCTTTGAT+GGG | + | tig0019430:86814-86833 | Msa1373380:intron | 40.0% |
| ! | CCCAAGAAAAGGTACAGAAA+AGG | - | tig0019430:86891-86910 | None:intergenic | 40.0% |
| AGAACTGCAACAAGCTTCAA+AGG | - | tig0019430:86967-86986 | None:intergenic | 40.0% | |
| CCCTATCTACAAATACTGGA+TGG | + | tig0019430:87213-87232 | Msa1373380:intron | 40.0% | |
| TGGCGCAGGAAAAATACTAA+AGG | + | tig0019430:87347-87366 | Msa1373380:intron | 40.0% | |
| CTCAAAGCTGTCTCTTTCAT+GGG | - | tig0019430:87429-87448 | None:intergenic | 40.0% | |
| TAGGTGAAGGATATTCACCA+TGG | - | tig0019430:87452-87471 | None:intergenic | 40.0% | |
| TGGTGAATATCCTTCACCTA+TGG | + | tig0019430:87452-87471 | Msa1373380:CDS | 40.0% | |
| TCATATGTTGCCATAGGTGA+AGG | - | tig0019430:87465-87484 | None:intergenic | 40.0% | |
| TTCACCTATGGCAACATATG+AGG | + | tig0019430:87464-87483 | Msa1373380:CDS | 40.0% | |
| CAAGCTAAGTATGAAGAGCT+TGG | - | tig0019430:87505-87524 | None:intergenic | 40.0% | |
| CAAGCTCTTCATACTTAGCT+TGG | + | tig0019430:87503-87522 | Msa1373380:CDS | 40.0% | |
| TTGCAGGATTCCTGTTATTG+GGG | + | tig0019430:87740-87759 | Msa1373380:intron | 40.0% | |
| GAGAAGTCACTTCAACAAAG+AGG | - | tig0019430:87788-87807 | None:intergenic | 40.0% | |
| TTTGTTGAAGTGACTTCTCG+TGG | + | tig0019430:87789-87808 | Msa1373380:CDS | 40.0% | |
| ATTCACACAATGTTTGGCGT+CGG | - | tig0019430:87876-87895 | None:intergenic | 40.0% | |
| GTCCAAAATATAGGACACTG+AGG | + | tig0019430:87913-87932 | Msa1373380:intron | 40.0% | |
| ! | CAAATGCTTCTTTTGTGCTG+CGG | + | tig0019430:88255-88274 | Msa1373380:CDS | 40.0% |
| AACTGGACCAATACAACTTC+CGG | + | tig0019430:88335-88354 | Msa1373380:CDS | 40.0% | |
| GAACATACCGGAAGTTGTAT+TGG | - | tig0019430:88345-88364 | None:intergenic | 40.0% | |
| ACAACTTCCGGTATGTTCAT+TGG | + | tig0019430:88347-88366 | Msa1373380:intron | 40.0% | |
| AAAGCAAAGCAAAGACCTTC+AGG | - | tig0019430:88559-88578 | None:intergenic | 40.0% | |
| TTTAACCTGTCGGGATATTG+GGG | + | tig0019430:88770-88789 | Msa1373380:intron | 40.0% | |
| ATTAACAACAGTAGGGTAGG+GGG | - | tig0019430:88844-88863 | None:intergenic | 40.0% | |
| GGAGGATCAAGAAAAATAGC+GGG | - | tig0019430:88995-89014 | None:intergenic | 40.0% | |
| ! | GAGCTTACATTTAATGGGTG+GGG | + | tig0019430:89439-89458 | Msa1373380:intron | 40.0% |
| CAATCCATTGCAAAATCCGA+GGG | + | tig0019430:89509-89528 | Msa1373380:intron | 40.0% | |
| !! | GAGGGAGATGGTTTTTCAAT+AGG | + | tig0019430:89527-89546 | Msa1373380:intron | 40.0% |
| AACTTCCTTCTAAGCAGCTT+AGG | + | tig0019430:89696-89715 | Msa1373380:intron | 40.0% | |
| TTACACCTAAGCTGCTTAGA+AGG | - | tig0019430:89704-89723 | None:intergenic | 40.0% | |
| ! | ACTTTTGTCACCCTGACTAT+TGG | - | tig0019430:90005-90024 | None:intergenic | 40.0% |
| !! | ATTGGTTCGGAGAAACTCAA+AGG | + | tig0019430:90408-90427 | Msa1373380:CDS | 40.0% |
| TGTTGTTAGCAGGAACACTA+TGG | - | tig0019430:90479-90498 | None:intergenic | 40.0% | |
| CAATGGTCCTACTAATCTCT+CGG | - | tig0019430:90659-90678 | None:intergenic | 40.0% | |
| AGGTAAGAGCAGGATAGTTT+AGG | - | tig0019430:90788-90807 | None:intergenic | 40.0% | |
| CTATCCTGCTCTTACCTATT+TGG | + | tig0019430:90791-90810 | Msa1373380:intron | 40.0% | |
| TAGACCAAATAGGTAAGAGC+AGG | - | tig0019430:90798-90817 | None:intergenic | 40.0% | |
| AATGCATATCTGAGCTTCTG+CGG | - | tig0019430:90955-90974 | None:intergenic | 40.0% | |
| ! | AACATGTCAGTATCTGGTTC+AGG | - | tig0019430:91157-91176 | None:intergenic | 40.0% |
| GCATTCAACATGTCAGTATC+TGG | - | tig0019430:91163-91182 | None:intergenic | 40.0% | |
| TACTGACATGTTGAATGCTG+AGG | + | tig0019430:91165-91184 | Msa1373380:CDS | 40.0% | |
| CTATGAAGATGATAAGGCGA+AGG | + | tig0019430:91237-91256 | Msa1373380:CDS | 40.0% | |
| TGTGGATTCATTGCCTGTTA+TGG | + | tig0019430:91273-91292 | Msa1373380:CDS | 40.0% | |
| GTGGATTCATTGCCTGTTAT+GGG | + | tig0019430:91274-91293 | Msa1373380:CDS | 40.0% | |
| TGTTAGCTAGGGAATGGAAT+AGG | + | tig0019430:91347-91366 | Msa1373380:three_prime_UTR | 40.0% | |
| CACAAATCACAGTGATCAAC+TGG | + | tig0019430:91446-91465 | Msa1373380:three_prime_UTR | 40.0% | |
| ATCTGTTTCAGCATCCTGTT+AGG | - | tig0019430:91546-91565 | None:intergenic | 40.0% | |
| TAGGTCTGTGAACAGTGTCT+TGG | + | tig0019430:86683-86702 | Msa1373380:intron | 45.0% | |
| ATGAACCCATCAAAGCTCAG+AGG | - | tig0019430:86822-86841 | None:intergenic | 45.0% | |
| GGTTCATGCTGTTACATCCT+CGG | + | tig0019430:86835-86854 | Msa1373380:intron | 45.0% | |
| CTGTTACATCCTCGGTAATC+TGG | + | tig0019430:86843-86862 | Msa1373380:intron | 45.0% | |
| TTACATCCTCGGTAATCTGG+AGG | + | tig0019430:86846-86865 | Msa1373380:intron | 45.0% | |
| TGAATTCCTCCAGATTACCG+AGG | - | tig0019430:86855-86874 | None:intergenic | 45.0% | |
| CGGTAATCTGGAGGAATTCA+TGG | + | tig0019430:86855-86874 | Msa1373380:intron | 45.0% | |
| TGCAACAAGCTTCAAAGGTC+TGG | - | tig0019430:86962-86981 | None:intergenic | 45.0% | |
| GCGCCACCATTAACAAGAAA+AGG | - | tig0019430:87333-87352 | None:intergenic | 45.0% | |
| ! | TTTCTTGTTAATGGTGGCGC+AGG | + | tig0019430:87333-87352 | Msa1373380:intron | 45.0% |
| GCTGTCTCTTTCATGGGTAA+TGG | - | tig0019430:87423-87442 | None:intergenic | 45.0% | |
| GCTCAAAGCTGTCTCTTTCA+TGG | - | tig0019430:87430-87449 | None:intergenic | 45.0% | |
| !! | AAAGAGACAGCTTTGAGCCA+TGG | + | tig0019430:87432-87451 | Msa1373380:CDS | 45.0% |
| ACCTATGGCAACATATGAGG+AGG | + | tig0019430:87467-87486 | Msa1373380:CDS | 45.0% | |
| ACCTCCTCATATGTTGCCAT+AGG | - | tig0019430:87471-87490 | None:intergenic | 45.0% | |
| TGCAGGATTCCTGTTATTGG+GGG | + | tig0019430:87741-87760 | Msa1373380:intron | 45.0% | |
| GATTCCTGTTATTGGGGGAA+GGG | + | tig0019430:87746-87765 | Msa1373380:CDS | 45.0% | |
| AATTCCCTTCCCCCAATAAC+AGG | - | tig0019430:87753-87772 | None:intergenic | 45.0% | |
| TGTTATTGGGGGAAGGGAAT+TGG | + | tig0019430:87752-87771 | Msa1373380:CDS | 45.0% | |
| TTGAAGTGACTTCTCGTGGA+GGG | + | tig0019430:87793-87812 | Msa1373380:CDS | 45.0% | |
| ! | CGCCTCAGTGTCCTATATTT+TGG | - | tig0019430:87918-87937 | None:intergenic | 45.0% |
| ! | GAAGCATTTGTAGCCGTTGA+TGG | - | tig0019430:88245-88264 | None:intergenic | 45.0% |
| !! | GAAAACTGCATCTTTGGAGC+AGG | - | tig0019430:88475-88494 | None:intergenic | 45.0% |
| AAGACAGCTGGTTGAACTTG+TGG | - | tig0019430:88508-88527 | None:intergenic | 45.0% | |
| GGGGTGTAGTTGCAATTGTT+TGG | + | tig0019430:88679-88698 | Msa1373380:intron | 45.0% | |
| TTAACCTGTCGGGATATTGG+GGG | + | tig0019430:88771-88790 | Msa1373380:intron | 45.0% | |
| GCAATCCATTGCAAAATCCG+AGG | + | tig0019430:89508-89527 | Msa1373380:intron | 45.0% | |
| ! | ATCTCCCTCGGATTTTGCAA+TGG | - | tig0019430:89516-89535 | None:intergenic | 45.0% |
| ATTGCAAAATCCGAGGGAGA+TGG | + | tig0019430:89515-89534 | Msa1373380:intron | 45.0% | |
| TCAACACCACCTAGTGGTAT+AGG | + | tig0019430:90118-90137 | Msa1373380:intron | 45.0% | |
| CAACACCACCTAGTGGTATA+GGG | + | tig0019430:90119-90138 | Msa1373380:intron | 45.0% | |
| TCAAACCCTATACCACTAGG+TGG | - | tig0019430:90127-90146 | None:intergenic | 45.0% | |
| TTCTCTTGTGCTCTCAGCAA+TGG | + | tig0019430:90308-90327 | Msa1373380:intron | 45.0% | |
| TCTCTTGTGCTCTCAGCAAT+GGG | + | tig0019430:90309-90328 | Msa1373380:intron | 45.0% | |
| CTCAGCAATGGGATCATCTT+CGG | + | tig0019430:90320-90339 | Msa1373380:intron | 45.0% | |
| GTTAGCAGGAACACTATGGT+GGG | - | tig0019430:90475-90494 | None:intergenic | 45.0% | |
| TGTTAGCAGGAACACTATGG+TGG | - | tig0019430:90476-90495 | None:intergenic | 45.0% | |
| TCTCTGATTTCTTCCTGCGT+CGG | - | tig0019430:90533-90552 | None:intergenic | 45.0% | |
| CACCCAAAACCAAACAGAAG+TGG | + | tig0019430:90573-90592 | Msa1373380:CDS | 45.0% | |
| TCTTTGCAGAACAGCATCCA+AGG | + | tig0019430:90607-90626 | Msa1373380:CDS | 45.0% | |
| CGAGAGATTAGTAGGACCAT+TGG | + | tig0019430:90657-90676 | Msa1373380:CDS | 45.0% | |
| CTTGTTCCAGAGTTCACCAA+TGG | - | tig0019430:90676-90695 | None:intergenic | 45.0% | |
| GAGCAGGATAGTTTAGGAAC+TGG | - | tig0019430:90782-90801 | None:intergenic | 45.0% | |
| GTACCTCTCTTTGTCCTTCA+CGG | - | tig0019430:91053-91072 | None:intergenic | 45.0% | |
| TCAGGAAATCGCTGTTGAAG+TGG | - | tig0019430:91139-91158 | None:intergenic | 45.0% | |
| TCATTGCCTGTTATGGGAGT+TGG | + | tig0019430:91280-91299 | Msa1373380:CDS | 45.0% | |
| ! | CACAGTGATCAACTGGGTTT+TGG | + | tig0019430:91453-91472 | Msa1373380:three_prime_UTR | 45.0% |
| TTCCGCGTCTGATCTCTAAA+TGG | + | tig0019430:91566-91585 | Msa1373380:three_prime_UTR | 45.0% | |
| GACCATTTAGAGATCAGACG+CGG | - | tig0019430:91571-91590 | None:intergenic | 45.0% | |
| !! | TAAATGAAAAATTATAATAA+TGG | + | tig0019430:89652-89671 | Msa1373380:intron | 5.0% |
| GAGAAGCTCCACACTCTCAT+GGG | + | tig0019430:87525-87544 | Msa1373380:CDS | 50.0% | |
| CATGGGCACCAAGTTCATGT+AGG | + | tig0019430:87542-87561 | Msa1373380:intron | 50.0% | |
| GGATTCCTGTTATTGGGGGA+AGG | + | tig0019430:87745-87764 | Msa1373380:intron | 50.0% | |
| GTTGAAGTGACTTCTCGTGG+AGG | + | tig0019430:87792-87811 | Msa1373380:CDS | 50.0% | |
| GTTAATTCTGCTCCGCCTGA+AGG | + | tig0019430:88541-88560 | Msa1373380:CDS | 50.0% | |
| GCAAAGCAAAGACCTTCAGG+CGG | - | tig0019430:88556-88575 | None:intergenic | 50.0% | |
| TAACCTGTCGGGATATTGGG+GGG | + | tig0019430:88772-88791 | Msa1373380:intron | 50.0% | |
| TTGCAGTCAACACCACCTAG+TGG | + | tig0019430:90112-90131 | Msa1373380:intron | 50.0% | |
| ATCATCTTCGGCAGGATCTC+AGG | + | tig0019430:90332-90351 | Msa1373380:CDS | 50.0% | |
| AGGTTGTCGGGGTCATTGAT+GGG | + | tig0019430:90352-90371 | Msa1373380:CDS | 50.0% | |
| !!! | CTGTTTGGTTTTGGGTGAGC+AGG | - | tig0019430:90570-90589 | None:intergenic | 50.0% |
| !! | CGGTGAAGAGGTTTTAGCCT+TGG | - | tig0019430:90627-90646 | None:intergenic | 50.0% |
| AGGCTAAAACCTCTTCACCG+AGG | + | tig0019430:90627-90646 | Msa1373380:CDS | 50.0% | |
| GGCTAAAACCTCTTCACCGA+GGG | + | tig0019430:90628-90647 | Msa1373380:CDS | 50.0% | |
| AAAACCTCTTCACCGAGGGA+AGG | + | tig0019430:90632-90651 | Msa1373380:CDS | 50.0% | |
| TAATCTCTCGGTCCTTCCCT+CGG | - | tig0019430:90647-90666 | None:intergenic | 50.0% | |
| GGAAGGACCGAGAGATTAGT+AGG | + | tig0019430:90649-90668 | Msa1373380:CDS | 50.0% | |
| GTAGGACCATTGGTGAACTC+TGG | + | tig0019430:90667-90686 | Msa1373380:CDS | 50.0% | |
| AAGCCGTGAAGGACAAAGAG+AGG | + | tig0019430:91047-91066 | Msa1373380:CDS | 50.0% | |
| GGCAGACTCTCTTCAAACTC+CGG | + | tig0019430:91186-91205 | Msa1373380:CDS | 50.0% | |
| TCAGCACCAACTCCCATAAC+AGG | - | tig0019430:91289-91308 | None:intergenic | 50.0% | |
| !! | GCTGAGACTTTGAGTTGCAG+TGG | + | tig0019430:91409-91428 | Msa1373380:three_prime_UTR | 50.0% |
| GGAGAAGCTCCACACTCTCA+TGG | + | tig0019430:87524-87543 | Msa1373380:CDS | 55.0% | |
| !! | ACTTGGTGCCCATGAGAGTG+TGG | - | tig0019430:87536-87555 | None:intergenic | 55.0% |
| CCAGGGAGCCTACATGAACT+TGG | - | tig0019430:87553-87572 | None:intergenic | 55.0% | |
| CCAAGTTCATGTAGGCTCCC+TGG | + | tig0019430:87550-87569 | Msa1373380:intron | 55.0% | |
| !! | GCATCTTTGGAGCAGGAGCT+GGG | - | tig0019430:88468-88487 | None:intergenic | 55.0% |
| !! | TGCATCTTTGGAGCAGGAGC+TGG | - | tig0019430:88469-88488 | None:intergenic | 55.0% |
| GCAATGGGATCATCTTCGGC+AGG | + | tig0019430:90324-90343 | Msa1373380:intron | 55.0% | |
| ! | TCGGCAGGATCTCAGGTTGT+CGG | + | tig0019430:90339-90358 | Msa1373380:CDS | 55.0% |
| CAGGTTGTCGGGGTCATTGA+TGG | + | tig0019430:90351-90370 | Msa1373380:CDS | 55.0% | |
| ! | GCTGGCAGCACAGGATTTTG+TGG | - | tig0019430:90450-90469 | None:intergenic | 55.0% |
| ! | GGAACACTATGGTGGGATGC+TGG | - | tig0019430:90468-90487 | None:intergenic | 55.0% |
| ! | GCGGTCACGTTGTTGTTAGC+AGG | - | tig0019430:90489-90508 | None:intergenic | 55.0% |
| AACAACGTGACCGCCTCTGT+CGG | + | tig0019430:90495-90514 | Msa1373380:CDS | 55.0% | |
| CGGTGTGTAGACACACAGTC+AGG | - | tig0019430:90935-90954 | None:intergenic | 55.0% | |
| CCGTCTGAACTACTCTGCTC+CGG | - | tig0019430:91208-91227 | None:intergenic | 55.0% | |
| CCGGAGCAGAGTAGTTCAGA+CGG | + | tig0019430:91205-91224 | Msa1373380:CDS | 55.0% | |
| !! | CTTTGGAGCAGGAGCTGGGA+TGG | - | tig0019430:88464-88483 | None:intergenic | 60.0% |
| TCACCCCCCAATATCCCGAC+AGG | - | tig0019430:88778-88797 | None:intergenic | 60.0% | |
| ! | CGGCAGGATCTCAGGTTGTC+GGG | + | tig0019430:90340-90359 | Msa1373380:CDS | 60.0% |
| ! | GGCAGGATCTCAGGTTGTCG+GGG | + | tig0019430:90341-90360 | Msa1373380:CDS | 60.0% |
| ACGATGGACACCGACAGAGG+CGG | - | tig0019430:90508-90527 | None:intergenic | 60.0% | |
| TGGTGGGATGCTGGCAGCAC+AGG | - | tig0019430:90459-90478 | None:intergenic | 65.0% | |
| GCGACGATGGACACCGACAG+AGG | - | tig0019430:90511-90530 | None:intergenic | 65.0% | |
| ! | TCTTCCTGCGTCGGCGACGA+TGG | - | tig0019430:90524-90543 | None:intergenic | 65.0% |
| CGGTCCTTCCCTCGGTGAAG+AGG | - | tig0019430:90639-90658 | None:intergenic | 65.0% | |
| GTGTCCATCGTCGCCGACGC+AGG | + | tig0019430:90517-90536 | Msa1373380:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019430 | gene | 85882 | 91668 | 85882 | ID=Msa1373380;Name=Msa1373380 |
| tig0019430 | mRNA | 85882 | 91668 | 85882 | ID=Msa1373380-mRNA-1;Parent=Msa1373380;Name=Msa1373380-mRNA-1;_AED=0.16;_eAED=0.16;_QI=68|1|1|1|0.83|0.57|7|353|402 |
| tig0019430 | exon | 85882 | 85914 | 85882 | ID=Msa1373380-mRNA-1:exon:3292;Parent=Msa1373380-mRNA-1 |
| tig0019430 | exon | 87355 | 87559 | 87355 | ID=Msa1373380-mRNA-1:exon:3293;Parent=Msa1373380-mRNA-1 |
| tig0019430 | exon | 87746 | 87824 | 87746 | ID=Msa1373380-mRNA-1:exon:3294;Parent=Msa1373380-mRNA-1 |
| tig0019430 | exon | 88194 | 88356 | 88194 | ID=Msa1373380-mRNA-1:exon:3295;Parent=Msa1373380-mRNA-1 |
| tig0019430 | exon | 88440 | 88562 | 88440 | ID=Msa1373380-mRNA-1:exon:3296;Parent=Msa1373380-mRNA-1 |
| tig0019430 | exon | 90325 | 90716 | 90325 | ID=Msa1373380-mRNA-1:exon:3297;Parent=Msa1373380-mRNA-1 |
| tig0019430 | exon | 91034 | 91668 | 91034 | ID=Msa1373380-mRNA-1:exon:3298;Parent=Msa1373380-mRNA-1 |
| tig0019430 | five_prime_UTR | 85882 | 85914 | 85882 | ID=Msa1373380-mRNA-1:five_prime_utr;Parent=Msa1373380-mRNA-1 |
| tig0019430 | five_prime_UTR | 87355 | 87389 | 87355 | ID=Msa1373380-mRNA-1:five_prime_utr;Parent=Msa1373380-mRNA-1 |
| tig0019430 | CDS | 87390 | 87559 | 87390 | ID=Msa1373380-mRNA-1:cds;Parent=Msa1373380-mRNA-1 |
| tig0019430 | CDS | 87746 | 87824 | 87746 | ID=Msa1373380-mRNA-1:cds;Parent=Msa1373380-mRNA-1 |
| tig0019430 | CDS | 88194 | 88356 | 88194 | ID=Msa1373380-mRNA-1:cds;Parent=Msa1373380-mRNA-1 |
| tig0019430 | CDS | 88440 | 88562 | 88440 | ID=Msa1373380-mRNA-1:cds;Parent=Msa1373380-mRNA-1 |
| tig0019430 | CDS | 90325 | 90716 | 90325 | ID=Msa1373380-mRNA-1:cds;Parent=Msa1373380-mRNA-1 |
| tig0019430 | CDS | 91034 | 91315 | 91034 | ID=Msa1373380-mRNA-1:cds;Parent=Msa1373380-mRNA-1 |
| tig0019430 | three_prime_UTR | 91316 | 91668 | 91316 | ID=Msa1373380-mRNA-1:three_prime_utr;Parent=Msa1373380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
