Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0875620 | XP_013451233.1 | 96.023 | 352 | 14 | 0 | 1 | 352 | 1 | 352 | 0.0 | 692 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0875620 | -0.811891 | 5.579100e-51 | -8.615850e-47 |
| Msa0006390 | Msa0875620 | 0.805653 | 1.203443e-49 | -8.615850e-47 |
| Msa0008410 | Msa0875620 | 0.804367 | 2.234697e-49 | -8.615850e-47 |
| Msa0017510 | Msa0875620 | 0.834149 | 3.541367e-56 | -8.615850e-47 |
| Msa0026910 | Msa0875620 | 0.806960 | 6.381966e-50 | -8.615850e-47 |
| Msa0031340 | Msa0875620 | 0.829063 | 6.345835e-55 | -8.615850e-47 |
| Msa0044020 | Msa0875620 | 0.800933 | 1.142079e-48 | -8.615850e-47 |
| Msa0046100 | Msa0875620 | 0.816479 | 5.414583e-52 | -8.615850e-47 |
| Msa0048000 | Msa0875620 | 0.837888 | 3.984650e-57 | -8.615850e-47 |
| Msa0050760 | Msa0875620 | 0.806964 | 6.368143e-50 | -8.615850e-47 |
| Msa0052730 | Msa0875620 | 0.802314 | 5.949426e-49 | -8.615850e-47 |
| Msa0064350 | Msa0875620 | 0.819805 | 9.575730e-53 | -8.615850e-47 |
| Msa0078650 | Msa0875620 | 0.801105 | 1.053247e-48 | -8.615850e-47 |
| Msa0090590 | Msa0875620 | 0.809387 | 1.940921e-50 | -8.615850e-47 |
| Msa0100000 | Msa0875620 | 0.806726 | 7.152717e-50 | -8.615850e-47 |
| Msa0110970 | Msa0875620 | 0.824291 | 8.742309e-54 | -8.615850e-47 |
| Msa0114540 | Msa0875620 | -0.823327 | 1.470667e-53 | -8.615850e-47 |
| Msa0604510 | Msa0875620 | 0.824339 | 8.513899e-54 | -8.615850e-47 |
| Msa0613090 | Msa0875620 | 0.803333 | 3.664533e-49 | -8.615850e-47 |
| Msa0616020 | Msa0875620 | 0.810648 | 1.038522e-50 | -8.615850e-47 |
| Msa0626090 | Msa0875620 | 0.826476 | 2.656961e-54 | -8.615850e-47 |
| Msa0626220 | Msa0875620 | 0.801484 | 8.812429e-49 | -8.615850e-47 |
| Msa0638070 | Msa0875620 | 0.833979 | 3.905719e-56 | -8.615850e-47 |
| Msa0657970 | Msa0875620 | 0.800513 | 1.391624e-48 | -8.615850e-47 |
| Msa0663900 | Msa0875620 | 0.801110 | 1.050719e-48 | -8.615850e-47 |
| Msa0673010 | Msa0875620 | -0.811378 | 7.213784e-51 | -8.615850e-47 |
| Msa0679710 | Msa0875620 | 0.803138 | 4.022763e-49 | -8.615850e-47 |
| Msa0680240 | Msa0875620 | 0.824323 | 8.590946e-54 | -8.615850e-47 |
| Msa0682550 | Msa0875620 | 0.809382 | 1.945570e-50 | -8.615850e-47 |
| Msa0684500 | Msa0875620 | 0.807054 | 6.096251e-50 | -8.615850e-47 |
| Msa0688480 | Msa0875620 | 0.803762 | 2.986889e-49 | -8.615850e-47 |
| Msa0690520 | Msa0875620 | 0.800312 | 1.529272e-48 | -8.615850e-47 |
| Msa0693380 | Msa0875620 | 0.807006 | 6.238958e-50 | -8.615850e-47 |
| Msa0696450 | Msa0875620 | 0.815328 | 9.779095e-52 | -8.615850e-47 |
| Msa0696640 | Msa0875620 | 0.821423 | 4.070391e-53 | -8.615850e-47 |
| Msa0703230 | Msa0875620 | 0.813229 | 2.845406e-51 | -8.615850e-47 |
| Msa0720820 | Msa0875620 | 0.809484 | 1.849890e-50 | -8.615850e-47 |
| Msa0740510 | Msa0875620 | 0.811889 | 5.584283e-51 | -8.615850e-47 |
| Msa0740640 | Msa0875620 | 0.810677 | 1.023299e-50 | -8.615850e-47 |
| Msa0744040 | Msa0875620 | 0.843970 | 1.009837e-58 | -8.615850e-47 |
| Msa0755410 | Msa0875620 | 0.803428 | 3.502022e-49 | -8.615850e-47 |
| Msa0761940 | Msa0875620 | 0.826415 | 2.747829e-54 | -8.615850e-47 |
| Msa0767220 | Msa0875620 | 0.807753 | 4.332823e-50 | -8.615850e-47 |
| Msa0777230 | Msa0875620 | 0.802070 | 6.679321e-49 | -8.615850e-47 |
| Msa0784380 | Msa0875620 | 0.818932 | 1.513786e-52 | -8.615850e-47 |
| Msa0797930 | Msa0875620 | 0.800655 | 1.301620e-48 | -8.615850e-47 |
| Msa0803890 | Msa0875620 | 0.815944 | 7.132080e-52 | -8.615850e-47 |
| Msa0810220 | Msa0875620 | 0.802765 | 4.802104e-49 | -8.615850e-47 |
| Msa0820770 | Msa0875620 | 0.806987 | 6.298278e-50 | -8.615850e-47 |
| Msa0824660 | Msa0875620 | 0.809246 | 2.080843e-50 | -8.615850e-47 |
| Msa0841940 | Msa0875620 | 0.817010 | 4.116633e-52 | -8.615850e-47 |
| Msa0124340 | Msa0875620 | 0.823775 | 1.155348e-53 | -8.615850e-47 |
| Msa0142950 | Msa0875620 | 0.807165 | 5.775535e-50 | -8.615850e-47 |
| Msa0143380 | Msa0875620 | 0.815516 | 8.882365e-52 | -8.615850e-47 |
| Msa0146260 | Msa0875620 | 0.802890 | 4.526077e-49 | -8.615850e-47 |
| Msa0148100 | Msa0875620 | 0.802459 | 5.555742e-49 | -8.615850e-47 |
| Msa0149000 | Msa0875620 | 0.819228 | 1.296889e-52 | -8.615850e-47 |
| Msa0150800 | Msa0875620 | 0.804718 | 1.887913e-49 | -8.615850e-47 |
| Msa0157290 | Msa0875620 | 0.834334 | 3.182355e-56 | -8.615850e-47 |
| Msa0170570 | Msa0875620 | 0.803458 | 3.453315e-49 | -8.615850e-47 |
| Msa0171290 | Msa0875620 | 0.821557 | 3.789838e-53 | -8.615850e-47 |
| Msa0173990 | Msa0875620 | 0.803496 | 3.390699e-49 | -8.615850e-47 |
| Msa0184020 | Msa0875620 | 0.810277 | 1.248840e-50 | -8.615850e-47 |
| Msa0184960 | Msa0875620 | 0.804445 | 2.152511e-49 | -8.615850e-47 |
| Msa0185590 | Msa0875620 | 0.808089 | 3.676392e-50 | -8.615850e-47 |
| Msa0186890 | Msa0875620 | 0.810735 | 9.940927e-51 | -8.615850e-47 |
| Msa0195630 | Msa0875620 | 0.801740 | 7.808540e-49 | -8.615850e-47 |
| Msa0205850 | Msa0875620 | 0.813951 | 1.973842e-51 | -8.615850e-47 |
| Msa0212990 | Msa0875620 | 0.800177 | 1.628693e-48 | -8.615850e-47 |
| Msa0216240 | Msa0875620 | 0.818113 | 2.321881e-52 | -8.615850e-47 |
| Msa0218780 | Msa0875620 | 0.805998 | 1.018150e-49 | -8.615850e-47 |
| Msa0220580 | Msa0875620 | 0.832873 | 7.371406e-56 | -8.615850e-47 |
| Msa0220740 | Msa0875620 | 0.824797 | 6.642957e-54 | -8.615850e-47 |
| Msa0222920 | Msa0875620 | 0.809455 | 1.876429e-50 | -8.615850e-47 |
| Msa0231650 | Msa0875620 | 0.809294 | 2.031586e-50 | -8.615850e-47 |
| Msa0369850 | Msa0875620 | 0.811561 | 6.584037e-51 | -8.615850e-47 |
| Msa0379640 | Msa0875620 | 0.815311 | 9.866950e-52 | -8.615850e-47 |
| Msa0391690 | Msa0875620 | 0.804582 | 2.015808e-49 | -8.615850e-47 |
| Msa0395790 | Msa0875620 | 0.823680 | 1.215668e-53 | -8.615850e-47 |
| Msa0410650 | Msa0875620 | 0.807582 | 4.710997e-50 | -8.615850e-47 |
| Msa0415810 | Msa0875620 | 0.807589 | 4.696172e-50 | -8.615850e-47 |
| Msa0416300 | Msa0875620 | 0.806609 | 7.569089e-50 | -8.615850e-47 |
| Msa0419820 | Msa0875620 | 0.805863 | 1.086807e-49 | -8.615850e-47 |
| Msa0438200 | Msa0875620 | 0.807945 | 3.944987e-50 | -8.615850e-47 |
| Msa0440750 | Msa0875620 | 0.810225 | 1.281236e-50 | -8.615850e-47 |
| Msa0449830 | Msa0875620 | 0.825952 | 3.541123e-54 | -8.615850e-47 |
| Msa0452710 | Msa0875620 | 0.812143 | 4.916616e-51 | -8.615850e-47 |
| Msa0452960 | Msa0875620 | 0.807972 | 3.893553e-50 | -8.615850e-47 |
| Msa0453690 | Msa0875620 | 0.812760 | 3.604260e-51 | -8.615850e-47 |
| Msa0461720 | Msa0875620 | 0.802768 | 4.797063e-49 | -8.615850e-47 |
| Msa0466390 | Msa0875620 | 0.812172 | 4.847135e-51 | -8.615850e-47 |
| Msa0243100 | Msa0875620 | 0.800742 | 1.249531e-48 | -8.615850e-47 |
| Msa0243710 | Msa0875620 | 0.802533 | 5.363025e-49 | -8.615850e-47 |
| Msa0254790 | Msa0875620 | 0.801614 | 8.287955e-49 | -8.615850e-47 |
| Msa0258760 | Msa0875620 | 0.825353 | 4.910744e-54 | -8.615850e-47 |
| Msa0260810 | Msa0875620 | 0.841841 | 3.721050e-58 | -8.615850e-47 |
| Msa0264150 | Msa0875620 | 0.805786 | 1.128336e-49 | -8.615850e-47 |
| Msa0274360 | Msa0875620 | 0.810515 | 1.109500e-50 | -8.615850e-47 |
| Msa0276920 | Msa0875620 | 0.805935 | 1.049631e-49 | -8.615850e-47 |
| Msa0282250 | Msa0875620 | 0.838064 | 3.590964e-57 | -8.615850e-47 |
| Msa0287650 | Msa0875620 | 0.842736 | 2.155268e-58 | -8.615850e-47 |
| Msa0288100 | Msa0875620 | 0.802532 | 5.364577e-49 | -8.615850e-47 |
| Msa0291500 | Msa0875620 | 0.803982 | 2.688381e-49 | -8.615850e-47 |
| Msa0307830 | Msa0875620 | -0.801385 | 9.232295e-49 | -8.615850e-47 |
| Msa0311700 | Msa0875620 | 0.832734 | 7.982088e-56 | -8.615850e-47 |
| Msa0314210 | Msa0875620 | 0.818614 | 1.788343e-52 | -8.615850e-47 |
| Msa0316800 | Msa0875620 | 0.838112 | 3.489994e-57 | -8.615850e-47 |
| Msa0317510 | Msa0875620 | 0.802012 | 6.866404e-49 | -8.615850e-47 |
| Msa0323080 | Msa0875620 | 0.817344 | 3.462878e-52 | -8.615850e-47 |
| Msa0323180 | Msa0875620 | 0.814278 | 1.671319e-51 | -8.615850e-47 |
| Msa0326520 | Msa0875620 | 0.800742 | 1.249287e-48 | -8.615850e-47 |
| Msa0333920 | Msa0875620 | 0.827481 | 1.527610e-54 | -8.615850e-47 |
| Msa0334040 | Msa0875620 | 0.845868 | 3.104472e-59 | -8.615850e-47 |
| Msa0335040 | Msa0875620 | 0.805525 | 1.280237e-49 | -8.615850e-47 |
| Msa0345970 | Msa0875620 | 0.801187 | 1.013712e-48 | -8.615850e-47 |
| Msa0346430 | Msa0875620 | 0.805246 | 1.464599e-49 | -8.615850e-47 |
| Msa0347360 | Msa0875620 | 0.814735 | 1.324495e-51 | -8.615850e-47 |
| Msa0356960 | Msa0875620 | 0.812227 | 4.713447e-51 | -8.615850e-47 |
| Msa0359030 | Msa0875620 | 0.806715 | 7.190878e-50 | -8.615850e-47 |
| Msa0484780 | Msa0875620 | 0.835984 | 1.220809e-56 | -8.615850e-47 |
| Msa0489790 | Msa0875620 | 0.810274 | 1.250439e-50 | -8.615850e-47 |
| Msa0495320 | Msa0875620 | 0.831597 | 1.525646e-55 | -8.615850e-47 |
| Msa0495330 | Msa0875620 | 0.802718 | 4.911250e-49 | -8.615850e-47 |
| Msa0506890 | Msa0875620 | 0.804094 | 2.547733e-49 | -8.615850e-47 |
| Msa0507680 | Msa0875620 | 0.808011 | 3.819071e-50 | -8.615850e-47 |
| Msa0509610 | Msa0875620 | 0.811582 | 6.513859e-51 | -8.615850e-47 |
| Msa0523460 | Msa0875620 | 0.839481 | 1.544062e-57 | -8.615850e-47 |
| Msa0526890 | Msa0875620 | 0.813131 | 2.989964e-51 | -8.615850e-47 |
| Msa0541860 | Msa0875620 | 0.811700 | 6.140317e-51 | -8.615850e-47 |
| Msa0545070 | Msa0875620 | 0.802915 | 4.473235e-49 | -8.615850e-47 |
| Msa0562440 | Msa0875620 | 0.814718 | 1.335758e-51 | -8.615850e-47 |
| Msa0585230 | Msa0875620 | 0.806208 | 9.197012e-50 | -8.615850e-47 |
| Msa0591770 | Msa0875620 | 0.800880 | 1.170852e-48 | -8.615850e-47 |
| Msa0843780 | Msa0875620 | -0.805295 | 1.430312e-49 | -8.615850e-47 |
| Msa0844240 | Msa0875620 | 0.815615 | 8.442286e-52 | -8.615850e-47 |
| Msa0850960 | Msa0875620 | 0.806304 | 8.780176e-50 | -8.615850e-47 |
| Msa0857640 | Msa0875620 | 0.826651 | 2.413071e-54 | -8.615850e-47 |
| Msa0861090 | Msa0875620 | 0.807754 | 4.331046e-50 | -8.615850e-47 |
| Msa0869100 | Msa0875620 | 0.828746 | 7.574077e-55 | -8.615850e-47 |
| Msa0875620 | Msa0876200 | 0.812088 | 5.055120e-51 | -8.615850e-47 |
| Msa0875620 | Msa0880140 | 0.832741 | 7.951047e-56 | -8.615850e-47 |
| Msa0875620 | Msa0896220 | 0.845130 | 4.920004e-59 | -8.615850e-47 |
| Msa0875620 | Msa0898760 | 0.801269 | 9.750654e-49 | -8.615850e-47 |
| Msa0875620 | Msa0903700 | 0.805914 | 1.060500e-49 | -8.615850e-47 |
| Msa0875620 | Msa0908170 | 0.801288 | 9.664154e-49 | -8.615850e-47 |
| Msa0875620 | Msa0922410 | 0.811205 | 7.865737e-51 | -8.615850e-47 |
| Msa0875620 | Msa0924310 | 0.805162 | 1.524944e-49 | -8.615850e-47 |
| Msa0875620 | Msa0933230 | 0.838278 | 3.162866e-57 | -8.615850e-47 |
| Msa0875620 | Msa0933310 | 0.842855 | 2.004393e-58 | -8.615850e-47 |
| Msa0875620 | Msa0954130 | 0.811628 | 6.364651e-51 | -8.615850e-47 |
| Msa0875620 | Msa0954550 | 0.805690 | 1.182080e-49 | -8.615850e-47 |
| Msa0875620 | Msa0969520 | 0.817306 | 3.531962e-52 | -8.615850e-47 |
| Msa0875620 | Msa0971090 | 0.828365 | 9.361831e-55 | -8.615850e-47 |
| Msa0875620 | Msa0993290 | 0.813860 | 2.066809e-51 | -8.615850e-47 |
| Msa0875620 | Msa0993600 | 0.818962 | 1.490342e-52 | -8.615850e-47 |
| Msa0875620 | Msa0996080 | 0.831284 | 1.821547e-55 | -8.615850e-47 |
| Msa0875620 | Msa1002850 | 0.805790 | 1.126072e-49 | -8.615850e-47 |
| Msa0875620 | Msa1004420 | 0.807613 | 4.640282e-50 | -8.615850e-47 |
| Msa0875620 | Msa1008060 | -0.805256 | 1.457500e-49 | -8.615850e-47 |
| Msa0875620 | Msa1013040 | 0.801267 | 9.758112e-49 | -8.615850e-47 |
| Msa0875620 | Msa1013110 | 0.800061 | 1.719627e-48 | -8.615850e-47 |
| Msa0875620 | Msa1039880 | 0.801348 | 9.395471e-49 | -8.615850e-47 |
| Msa0875620 | Msa1040400 | 0.804702 | 1.902558e-49 | -8.615850e-47 |
| Msa0875620 | Msa1043450 | 0.800549 | 1.367835e-48 | -8.615850e-47 |
| Msa0875620 | Msa1045200 | 0.837278 | 5.712872e-57 | -8.615850e-47 |
| Msa0875620 | Msa1046300 | 0.802918 | 4.466271e-49 | -8.615850e-47 |
| Msa0875620 | Msa1052830 | 0.804895 | 1.734045e-49 | -8.615850e-47 |
| Msa0875620 | Msa1075220 | -0.804935 | 1.700886e-49 | -8.615850e-47 |
| Msa0875620 | Msa1079590 | 0.818086 | 2.354404e-52 | -8.615850e-47 |
| Msa0875620 | Msa1080160 | 0.828011 | 1.139723e-54 | -8.615850e-47 |
| Msa0875620 | Msa1082500 | 0.836424 | 9.432709e-57 | -8.615850e-47 |
| Msa0875620 | Msa1085200 | 0.809859 | 1.536207e-50 | -8.615850e-47 |
| Msa0875620 | Msa1085300 | 0.810488 | 1.124232e-50 | -8.615850e-47 |
| Msa0875620 | Msa1101580 | 0.803138 | 4.022798e-49 | -8.615850e-47 |
| Msa0875620 | Msa1123380 | 0.802661 | 5.047493e-49 | -8.615850e-47 |
| Msa0875620 | Msa1127890 | 0.833966 | 3.935386e-56 | -8.615850e-47 |
| Msa0875620 | Msa1130270 | -0.813104 | 3.031144e-51 | -8.615850e-47 |
| Msa0875620 | Msa1131220 | 0.813490 | 2.492636e-51 | -8.615850e-47 |
| Msa0875620 | Msa1134110 | 0.811751 | 5.985960e-51 | -8.615850e-47 |
| Msa0875620 | Msa1137570 | 0.838846 | 2.255390e-57 | -8.615850e-47 |
| Msa0875620 | Msa1140690 | 0.803195 | 3.914117e-49 | -8.615850e-47 |
| Msa0875620 | Msa1154030 | 0.808624 | 2.826153e-50 | -8.615850e-47 |
| Msa0875620 | Msa1154280 | 0.812222 | 4.726912e-51 | -8.615850e-47 |
| Msa0875620 | Msa1162550 | -0.801946 | 7.082819e-49 | -8.615850e-47 |
| Msa0875620 | Msa1165870 | 0.811231 | 7.762292e-51 | -8.615850e-47 |
| Msa0875620 | Msa1168160 | 0.821228 | 4.512875e-53 | -8.615850e-47 |
| Msa0875620 | Msa1172670 | 0.823367 | 1.439121e-53 | -8.615850e-47 |
| Msa0875620 | Msa1173100 | 0.804964 | 1.677857e-49 | -8.615850e-47 |
| Msa0875620 | Msa1179460 | 0.820639 | 6.168799e-53 | -8.615850e-47 |
| Msa0875620 | Msa1187840 | 0.820072 | 8.319388e-53 | -8.615850e-47 |
| Msa0875620 | Msa1188710 | 0.807906 | 4.019747e-50 | -8.615850e-47 |
| Msa0875620 | Msa1193290 | 0.827834 | 1.256957e-54 | -8.615850e-47 |
| Msa0875620 | Msa1201560 | 0.812602 | 3.903335e-51 | -8.615850e-47 |
| Msa0875620 | Msa1211150 | -0.827415 | 1.584604e-54 | -8.615850e-47 |
| Msa0875620 | Msa1214880 | 0.805364 | 1.383303e-49 | -8.615850e-47 |
| Msa0875620 | Msa1214890 | 0.818269 | 2.141174e-52 | -8.615850e-47 |
| Msa0875620 | Msa1221060 | 0.809617 | 1.731803e-50 | -8.615850e-47 |
| Msa0875620 | Msa1231240 | 0.808248 | 3.400729e-50 | -8.615850e-47 |
| Msa0875620 | Msa1233890 | 0.810556 | 1.086765e-50 | -8.615850e-47 |
| Msa0875620 | Msa1238930 | 0.811971 | 5.361812e-51 | -8.615850e-47 |
| Msa0875620 | Msa1242230 | 0.801688 | 8.003264e-49 | -8.615850e-47 |
| Msa0875620 | Msa1256470 | 0.819344 | 1.220417e-52 | -8.615850e-47 |
| Msa0875620 | Msa1267840 | 0.803640 | 3.165518e-49 | -8.615850e-47 |
| Msa0875620 | Msa1276660 | 0.810580 | 1.073936e-50 | -8.615850e-47 |
| Msa0875620 | Msa1283170 | 0.809071 | 2.267485e-50 | -8.615850e-47 |
| Msa0875620 | Msa1283840 | 0.807926 | 3.981380e-50 | -8.615850e-47 |
| Msa0875620 | Msa1284260 | 0.812158 | 4.881253e-51 | -8.615850e-47 |
| Msa0875620 | Msa1284550 | 0.804998 | 1.650634e-49 | -8.615850e-47 |
| Msa0875620 | Msa1296940 | 0.811631 | 6.355849e-51 | -8.615850e-47 |
| Msa0875620 | Msa1299300 | -0.818316 | 2.088413e-52 | -8.615850e-47 |
| Msa0875620 | Msa1303250 | 0.803626 | 3.186178e-49 | -8.615850e-47 |
| Msa0875620 | Msa1314340 | 0.804465 | 2.131839e-49 | -8.615850e-47 |
| Msa0875620 | Msa1322860 | 0.821146 | 4.714729e-53 | -8.615850e-47 |
| Msa0875620 | Msa1327050 | 0.830422 | 2.963223e-55 | -8.615850e-47 |
| Msa0875620 | Msa1331910 | 0.824746 | 6.829985e-54 | -8.615850e-47 |
| Msa0875620 | Msa1331920 | 0.801154 | 1.029469e-48 | -8.615850e-47 |
| Msa0875620 | Msa1336710 | 0.809561 | 1.780221e-50 | -8.615850e-47 |
| Msa0875620 | Msa1340020 | 0.828060 | 1.109109e-54 | -8.615850e-47 |
| Msa0875620 | Msa1340650 | 0.835855 | 1.315874e-56 | -8.615850e-47 |
| Msa0875620 | Msa1346370 | 0.844320 | 8.132949e-59 | -8.615850e-47 |
| Msa0875620 | Msa1353470 | 0.832301 | 1.022198e-55 | -8.615850e-47 |
| Msa0875620 | Msa1353980 | 0.817728 | 2.837266e-52 | -8.615850e-47 |
| Msa0875620 | Msa1359650 | -0.808797 | 2.596028e-50 | -8.615850e-47 |
| Msa0875620 | Msa1361400 | 0.809252 | 2.074571e-50 | -8.615850e-47 |
| Msa0875620 | Msa1361410 | 0.815987 | 6.973290e-52 | -8.615850e-47 |
| Msa0875620 | Msa1362880 | 0.810290 | 1.240740e-50 | -8.615850e-47 |
| Msa0875620 | Msa1365150 | 0.802823 | 4.673230e-49 | -8.615850e-47 |
| Msa0875620 | Msa1367880 | 0.813761 | 2.172765e-51 | -8.615850e-47 |
| Msa0875620 | Msa1374040 | 0.800170 | 1.634468e-48 | -8.615850e-47 |
| Msa0875620 | Msa1394730 | 0.808553 | 2.926357e-50 | -8.615850e-47 |
| Msa0875620 | Msa1402730 | 0.800460 | 1.426103e-48 | -8.615850e-47 |
| Msa0875620 | Msa1404540 | 0.835069 | 2.079228e-56 | -8.615850e-47 |
| Msa0875620 | Msa1411020 | 0.825149 | 5.486470e-54 | -8.615850e-47 |
| Msa0875620 | Msa1420490 | 0.808331 | 3.263439e-50 | -8.615850e-47 |
| Msa0875620 | Msa1422580 | 0.802380 | 5.766923e-49 | -8.615850e-47 |
| Msa0875620 | Msa1423390 | 0.806335 | 8.649300e-50 | -8.615850e-47 |
| Msa0875620 | Msa1424290 | 0.816970 | 4.201683e-52 | -8.615850e-47 |
| Msa0875620 | Msa1431060 | 0.827585 | 1.442039e-54 | -8.615850e-47 |
| Msa0875620 | Msa1434350 | 0.818675 | 1.731603e-52 | -8.615850e-47 |
| Msa0875620 | Msa1439320 | 0.825164 | 5.441530e-54 | -8.615850e-47 |
| Msa0875620 | Msa1440370 | 0.805643 | 1.208950e-49 | -8.615850e-47 |
| Msa0875620 | Msa1440600 | 0.804234 | 2.382435e-49 | -8.615850e-47 |
| Msa0875620 | Msa1440810 | 0.815255 | 1.015408e-51 | -8.615850e-47 |
| Msa0875620 | Msa1452120 | 0.809286 | 2.039247e-50 | -8.615850e-47 |
| Msa0875620 | Msa1457910 | 0.804290 | 2.319556e-49 | -8.615850e-47 |
| Msa0875620 | Msa1460020 | 0.825582 | 4.332705e-54 | -8.615850e-47 |
| Msa0875620 | Msa1461300 | 0.836021 | 1.194124e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0875620 | MtrunA17_Chr6g0456671 | 96.023 | 352 | 14 | 0 | 1 | 352 | 1 | 352 | 0.0 | 692 |
| Msa0875620 | MtrunA17_Chr3g0111211 | 84.211 | 95 | 14 | 1 | 1 | 95 | 1 | 94 | 5.66e-49 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0875620 | AT5G15880.1 | 59.887 | 354 | 134 | 5 | 1 | 352 | 1 | 348 | 2.59e-137 | 394 |
Find 73 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCAGCTCCACCTCTTT+CGG | 0.189611 | 6_1:-12278097 | None:intergenic |
| TTTCCAGCTCCACCTCTTTC+GGG | 0.214819 | 6_1:-12278096 | None:intergenic |
| TAAACATAATTGTATTTATC+AGG | 0.247394 | 6_1:+12278329 | Msa0875620:CDS |
| TGTATATAACAAGAAGTTTC+TGG | 0.262571 | 6_1:+12278486 | Msa0875620:three_prime_UTR |
| TTTAATGGTCGACACCAAAA+TGG | 0.264770 | 6_1:+12272319 | Msa0875620:five_prime_UTR |
| GTCATAATCAACTAAGAAAA+AGG | 0.296441 | 6_1:-12278402 | None:intergenic |
| TAAAAGCATTAGAGAAGAAA+TGG | 0.317582 | 6_1:+12276919 | Msa0875620:CDS |
| TCAGCGTCTCTTCTCTAAGC+TGG | 0.349364 | 6_1:-12274446 | None:intergenic |
| TGAGAATCGGAGAAGAGAAT+TGG | 0.356390 | 6_1:-12272633 | None:intergenic |
| ATCTTTGATATCTGAGGGTT+GGG | 0.368721 | 6_1:+12274825 | Msa0875620:CDS |
| TCAGACACACTTTATAGTTA+AGG | 0.374267 | 6_1:+12272270 | Msa0875620:five_prime_UTR |
| ACATTAGATAAACAACTTCA+TGG | 0.383674 | 6_1:+12277807 | Msa0875620:CDS |
| GAAGAAATGGGCTGCAGTGC+AGG | 0.416462 | 6_1:+12276932 | Msa0875620:CDS |
| TAGTTAAGGAGCAAAGCATA+TGG | 0.423878 | 6_1:+12272284 | Msa0875620:five_prime_UTR |
| TGTTAGAGGCTCCTCTGATA+AGG | 0.428178 | 6_1:+12278186 | Msa0875620:CDS |
| ACGTTGGAGAGAGTTAGTTT+TGG | 0.431307 | 6_1:-12272682 | None:intergenic |
| GGAAGACGCTGAGAGATATC+AGG | 0.451663 | 6_1:-12272738 | None:intergenic |
| GCATGGGCAGCAGATGTAGT+AGG | 0.458104 | 6_1:+12272567 | Msa0875620:CDS |
| TCAGCAACTAGCAGTTAAAC+AGG | 0.459491 | 6_1:+12277836 | Msa0875620:CDS |
| CCTCAGTCTCACCTCTAACT+TGG | 0.461239 | 6_1:-12274556 | None:intergenic |
| AAAGAAGCTGAGGGCTGAGC+TGG | 0.466173 | 6_1:+12274765 | Msa0875620:CDS |
| AACGATACATACCTGATGTC+TGG | 0.470979 | 6_1:-12272829 | None:intergenic |
| ATTACTACGGACCAAGTTAG+AGG | 0.481715 | 6_1:+12274545 | Msa0875620:CDS |
| CAGCGTCTCTTCTCTAAGCT+GGG | 0.487301 | 6_1:-12274445 | None:intergenic |
| CTCAGATATCAAAGATTGGC+TGG | 0.488761 | 6_1:-12274818 | None:intergenic |
| TGATAAGGTACATGGTTTGT+CGG | 0.491411 | 6_1:+12278201 | Msa0875620:CDS |
| CATGGTTTGTCGGATTATGA+TGG | 0.494793 | 6_1:+12278211 | Msa0875620:CDS |
| TCATTCCTCAACCAGACATC+AGG | 0.506788 | 6_1:+12272818 | Msa0875620:CDS |
| AACCCTCAGATATCAAAGAT+TGG | 0.510374 | 6_1:-12274822 | None:intergenic |
| TCACCCGAAAGAGGTGGAGC+TGG | 0.510606 | 6_1:+12278093 | Msa0875620:CDS |
| AATCTTTGATATCTGAGGGT+TGG | 0.510746 | 6_1:+12274824 | Msa0875620:CDS |
| AAAAGCATTAGAGAAGAAAT+GGG | 0.512124 | 6_1:+12276920 | Msa0875620:CDS |
| GCAGATGTAGTAGGAGGAAA+CGG | 0.513861 | 6_1:+12272576 | Msa0875620:CDS |
| GGATGAGAAGAAGAAAGAGC+TGG | 0.515451 | 6_1:+12274927 | Msa0875620:CDS |
| AACGTTCGATTCAAGATCTA+CGG | 0.518088 | 6_1:+12272700 | Msa0875620:CDS |
| AACAAGATAAATAATAGAGC+TGG | 0.523615 | 6_1:+12274856 | Msa0875620:CDS |
| CAGCCAATCTTTGATATCTG+AGG | 0.529090 | 6_1:+12274819 | Msa0875620:CDS |
| AATTTCTTCAAGTAAGCCCT+CGG | 0.533090 | 6_1:-12278071 | None:intergenic |
| TTTCAGTTCTGCCTGCAGAA+TGG | 0.539875 | 6_1:-12278252 | None:intergenic |
| TAAGTAGCATAAGCCTCTGC+TGG | 0.541302 | 6_1:-12278276 | None:intergenic |
| CAATGGCAGGATTATTAGCA+TGG | 0.542701 | 6_1:+12272550 | Msa0875620:exon |
| AGGCTTCCATACCATTCTGC+AGG | 0.543453 | 6_1:+12278241 | Msa0875620:CDS |
| AGCAGAGGCTTATGCTACTT+AGG | 0.546956 | 6_1:+12278278 | Msa0875620:CDS |
| AGCCAATCTTTGATATCTGA+GGG | 0.547345 | 6_1:+12274820 | Msa0875620:CDS |
| CGCTGAGAGATATCAGGAGG+AGG | 0.560401 | 6_1:-12272732 | None:intergenic |
| GCACTTAAACAGCCTTCCCC+AGG | 0.572318 | 6_1:+12276960 | Msa0875620:CDS |
| TGCTTTCAGACACAAGCCGA+GGG | 0.573660 | 6_1:+12278055 | Msa0875620:intron |
| TGAAGAAATTCACCCGAAAG+AGG | 0.576618 | 6_1:+12278084 | Msa0875620:CDS |
| ACATACCTGATGTCTGGTTG+AGG | 0.577745 | 6_1:-12272823 | None:intergenic |
| CAATTGCGAGAATAAAATCA+AGG | 0.585165 | 6_1:+12274503 | Msa0875620:CDS |
| ATGAAATTGAAAAGAAGCTG+AGG | 0.586060 | 6_1:+12274755 | Msa0875620:CDS |
| GAGGCTTATGCTACTTAGGT+CGG | 0.588156 | 6_1:+12278282 | Msa0875620:CDS |
| GGCTCCTCTGATAAGGTACA+TGG | 0.589599 | 6_1:+12278193 | Msa0875620:CDS |
| AGAGAATGAGCATGAAGATG+AGG | 0.593261 | 6_1:-12272759 | None:intergenic |
| GTTCTGCCTGCAGAATGGTA+TGG | 0.604494 | 6_1:-12278247 | None:intergenic |
| TTTGATATCTGAGGGTTGGG+AGG | 0.607138 | 6_1:+12274828 | Msa0875620:CDS |
| TGGAGGAGGCTGAATTACTA+CGG | 0.607541 | 6_1:+12274532 | Msa0875620:CDS |
| GCTTAGAGAAGAGACGCTGA+AGG | 0.611996 | 6_1:+12274449 | Msa0875620:CDS |
| TTGCTTTCAGACACAAGCCG+AGG | 0.620197 | 6_1:+12278054 | Msa0875620:intron |
| AGAAATTCACCCGAAAGAGG+TGG | 0.624850 | 6_1:+12278087 | Msa0875620:CDS |
| CGGATTATGATGGTCATCAG+AGG | 0.627698 | 6_1:+12278221 | Msa0875620:CDS |
| TAAGATATAATACCTGGGGA+AGG | 0.628822 | 6_1:-12276972 | None:intergenic |
| TGGGCAGCAGATGTAGTAGG+AGG | 0.629568 | 6_1:+12272570 | Msa0875620:CDS |
| AATGGCAGGATTATTAGCAT+GGG | 0.635893 | 6_1:+12272551 | Msa0875620:exon |
| GCAGAACTGAAAGCCAGCAG+AGG | 0.638565 | 6_1:+12278263 | Msa0875620:CDS |
| AGACGCTGAGAGATATCAGG+AGG | 0.660369 | 6_1:-12272735 | None:intergenic |
| CAAACCATGTACCTTATCAG+AGG | 0.662281 | 6_1:-12278197 | None:intergenic |
| GTAGATCTTGAATCGAACGT+TGG | 0.668688 | 6_1:-12272698 | None:intergenic |
| GGAATCGAGTTCACGAACGT+AGG | 0.679922 | 6_1:-12272661 | None:intergenic |
| TGGAAAGATTGAATGCACAA+TGG | 0.702297 | 6_1:+12278113 | Msa0875620:CDS |
| TGAAATTGAAAAGAAGCTGA+GGG | 0.710836 | 6_1:+12274756 | Msa0875620:CDS |
| GATGTAGTAGGAGGAAACGG+AGG | 0.714297 | 6_1:+12272579 | Msa0875620:CDS |
| GTATTCATAAGTACAAACAA+AGG | 0.725113 | 6_1:-12278429 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTAACTGTTTTTTAA+TGG | + | chr6_1:12272427-12272446 | Msa0875620:intron | 10.0% |
| !! | TTTAAATTTAATTCATGAAA+TGG | + | chr6_1:12272882-12272901 | Msa0875620:intron | 10.0% |
| !! | TGTTAAAATATTATACTTAA+TGG | + | chr6_1:12276649-12276668 | Msa0875620:intron | 10.0% |
| !! | TTCATATATCAAATAGTTTA+AGG | + | chr6_1:12272404-12272423 | Msa0875620:intron | 15.0% |
| !! | TGTTTAATTCTTAAAATTCT+AGG | + | chr6_1:12273922-12273941 | Msa0875620:intron | 15.0% |
| !!! | CAAGAATCATTTTAAAATTT+CGG | - | chr6_1:12274068-12274087 | None:intergenic | 15.0% |
| !! | CATTTAGCAATTATTAATTA+TGG | - | chr6_1:12275452-12275471 | None:intergenic | 15.0% |
| !! | ATAGTTATACATTCATATAA+TGG | + | chr6_1:12276115-12276134 | Msa0875620:intron | 15.0% |
| !!! | AACTAAATTGATAATTCAAT+AGG | + | chr6_1:12276370-12276389 | Msa0875620:intron | 15.0% |
| !! | ATATTATACTTAATGGTTAA+TGG | + | chr6_1:12276656-12276675 | Msa0875620:intron | 15.0% |
| !! | AAATGAATTATTCTATCAAA+AGG | + | chr6_1:12277612-12277631 | Msa0875620:intron | 15.0% |
| !! | TAAACATAATTGTATTTATC+AGG | + | chr6_1:12278329-12278348 | Msa0875620:CDS | 15.0% |
| !!! | TGGATTAAGCTTTTTTTTAA+TGG | + | chr6_1:12272304-12272323 | Msa0875620:five_prime_UTR | 20.0% |
| !!! | TTTTTTCTTCACTTCAATTT+TGG | - | chr6_1:12272470-12272489 | None:intergenic | 20.0% |
| !! | GAAAAGAAAGAAAAAAACAA+TGG | + | chr6_1:12272533-12272552 | Msa0875620:exon | 20.0% |
| !! | TTAAATTACATTTCACTCAA+GGG | - | chr6_1:12272867-12272886 | None:intergenic | 20.0% |
| !! | TTTAAATTACATTTCACTCA+AGG | - | chr6_1:12272868-12272887 | None:intergenic | 20.0% |
| !!! | TCACTTTCTCAAAATTTTAT+CGG | + | chr6_1:12273093-12273112 | Msa0875620:intron | 20.0% |
| !!! | TCCATTTTGTAAATTAGTAT+TGG | + | chr6_1:12273784-12273803 | Msa0875620:intron | 20.0% |
| !! | ACCAATACTAATTTACAAAA+TGG | - | chr6_1:12273788-12273807 | None:intergenic | 20.0% |
| !! | AATTGTTCATTTCTTGAAAT+TGG | + | chr6_1:12274017-12274036 | Msa0875620:intron | 20.0% |
| !! | TTATTCAAATTGAAAATGCT+CGG | + | chr6_1:12274212-12274231 | Msa0875620:intron | 20.0% |
| !! | GAATAAAATCAAGGAAAAAA+TGG | + | chr6_1:12274512-12274531 | Msa0875620:CDS | 20.0% |
| !!! | GTTGTTTTTATAAGCTATAT+TGG | + | chr6_1:12275254-12275273 | Msa0875620:intron | 20.0% |
| !! | ATTGGAGAACTTATTAAAAT+TGG | + | chr6_1:12275272-12275291 | Msa0875620:intron | 20.0% |
| !! | AGCAATTATTAATTATGGAT+TGG | - | chr6_1:12275447-12275466 | None:intergenic | 20.0% |
| !! | AAATAGATAGAGAAAATAGA+GGG | + | chr6_1:12275748-12275767 | Msa0875620:intron | 20.0% |
| !!! | TATACATTCATATAATGGAA+AGG | + | chr6_1:12276120-12276139 | Msa0875620:intron | 20.0% |
| !!! | ATACATTCATATAATGGAAA+GGG | + | chr6_1:12276121-12276140 | Msa0875620:intron | 20.0% |
| !!! | TGTTCATTTCTTTTAAGAAA+TGG | - | chr6_1:12276194-12276213 | None:intergenic | 20.0% |
| !! | TTCATTCAAAACTATAGTTA+TGG | + | chr6_1:12276299-12276318 | Msa0875620:intron | 20.0% |
| !! | TGAATTATCAATTTAGTTGA+AGG | - | chr6_1:12276368-12276387 | None:intergenic | 20.0% |
| !!! | GCATTTAATTTGCATTTAAA+AGG | - | chr6_1:12276619-12276638 | None:intergenic | 20.0% |
| !! | TTAAATTATTGTTTCAGTTC+TGG | - | chr6_1:12276831-12276850 | None:intergenic | 20.0% |
| !!! | ATTTTATTTTCAGAGTTCAA+TGG | + | chr6_1:12276887-12276906 | Msa0875620:intron | 20.0% |
| !! | ATAAGTAAGATATAATACCT+GGG | - | chr6_1:12276980-12276999 | None:intergenic | 20.0% |
| !! | TTATGTTTATATATGTGTGT+CGG | + | chr6_1:12277001-12277020 | Msa0875620:intron | 20.0% |
| !! | CAATAAAAACGATAAGATTA+CGG | - | chr6_1:12277686-12277705 | None:intergenic | 20.0% |
| !!! | AATCAATTTTGGTTCCATTT+TGG | - | chr6_1:12272336-12272355 | None:intergenic | 25.0% |
| ! | ATTCATGAAATGGAATTGTT+AGG | + | chr6_1:12272892-12272911 | Msa0875620:intron | 25.0% |
| ! | ATCACATTATTTATGTTGCA+CGG | + | chr6_1:12272980-12272999 | Msa0875620:intron | 25.0% |
| ! | ATAAGCTATTTATCCAAACA+TGG | - | chr6_1:12273543-12273562 | None:intergenic | 25.0% |
| ! | TTTGCAGCTTATATCATATA+AGG | + | chr6_1:12273563-12273582 | Msa0875620:intron | 25.0% |
| ! | TTGCAGCTTATATCATATAA+GGG | + | chr6_1:12273564-12273583 | Msa0875620:intron | 25.0% |
| !!! | ATGCATAAGCTATTTCTATA+AGG | + | chr6_1:12273590-12273609 | Msa0875620:intron | 25.0% |
| !!! | CACATTAGTTGTTTTTAAGT+CGG | + | chr6_1:12274106-12274125 | Msa0875620:intron | 25.0% |
| !!! | AATTTTGGTATGAAACTGTT+TGG | + | chr6_1:12274260-12274279 | Msa0875620:intron | 25.0% |
| !! | GTCGAAGATTTTCAATTTTA+GGG | + | chr6_1:12274296-12274315 | Msa0875620:intron | 25.0% |
| ! | TAAAATCAAGGAAAAAATGG+AGG | + | chr6_1:12274515-12274534 | Msa0875620:CDS | 25.0% |
| ! | AACAAGATAAATAATAGAGC+TGG | + | chr6_1:12274856-12274875 | Msa0875620:CDS | 25.0% |
| ! | AACAACTATGCTAGAAAAAT+TGG | + | chr6_1:12274906-12274925 | Msa0875620:CDS | 25.0% |
| !!! | AAGTGCTTTTTCATATACTA+TGG | + | chr6_1:12275100-12275119 | Msa0875620:intron | 25.0% |
| !!! | AGTGCTTTTTCATATACTAT+GGG | + | chr6_1:12275101-12275120 | Msa0875620:intron | 25.0% |
| ! | AATAAGCTATTTATCCAAAC+AGG | - | chr6_1:12273544-12273563 | None:intergenic | 25.0% |
| ! | AACTTATTTCAATAAGCTAG+AGG | - | chr6_1:12275414-12275433 | None:intergenic | 25.0% |
| ! | TAATTGCTAAATGATTGAAG+TGG | + | chr6_1:12275459-12275478 | Msa0875620:intron | 25.0% |
| ! | GAAATAGATAGAGAAAATAG+AGG | + | chr6_1:12275747-12275766 | Msa0875620:intron | 25.0% |
| !!! | TGTTTCTTTATTTTGTTGCA+TGG | - | chr6_1:12275827-12275846 | None:intergenic | 25.0% |
| ! | CAAAAAAAACAGAGGAAAAA+TGG | + | chr6_1:12275868-12275887 | Msa0875620:intron | 25.0% |
| !! | TACATTCATATAATGGAAAG+GGG | + | chr6_1:12276122-12276141 | Msa0875620:intron | 25.0% |
| ! | TCAATTTAGTTGAAGGAAAT+GGG | - | chr6_1:12276361-12276380 | None:intergenic | 25.0% |
| ! | ATCAATTTAGTTGAAGGAAA+TGG | - | chr6_1:12276362-12276381 | None:intergenic | 25.0% |
| ! | AGAAAAAACAGAGAAAATAG+AGG | + | chr6_1:12276471-12276490 | Msa0875620:intron | 25.0% |
| !!! | TTAATGGACTTTTAAAGTGA+TGG | + | chr6_1:12276672-12276691 | Msa0875620:intron | 25.0% |
| !!! | TTTTCTTTGACTATTTGTTG+CGG | + | chr6_1:12276722-12276741 | Msa0875620:intron | 25.0% |
| !!! | TAAAAGCATTAGAGAAGAAA+TGG | + | chr6_1:12276919-12276938 | Msa0875620:CDS | 25.0% |
| !!! | AAAAGCATTAGAGAAGAAAT+GGG | + | chr6_1:12276920-12276939 | Msa0875620:CDS | 25.0% |
| ! | TAAGTAAGATATAATACCTG+GGG | - | chr6_1:12276979-12276998 | None:intergenic | 25.0% |
| ! | CATAAGTAAGATATAATACC+TGG | - | chr6_1:12276981-12277000 | None:intergenic | 25.0% |
| ! | AAAGCAACCAAATACAAAAA+AGG | - | chr6_1:12277104-12277123 | None:intergenic | 25.0% |
| !!! | TTTTTGTATTTGGTTGCTTT+AGG | + | chr6_1:12277104-12277123 | Msa0875620:intron | 25.0% |
| !! | TCAAGAACTTGTTTATAGTA+GGG | + | chr6_1:12277210-12277229 | Msa0875620:intron | 25.0% |
| ! | AAAACTATACCAAGTTCAAA+TGG | - | chr6_1:12277276-12277295 | None:intergenic | 25.0% |
| !!! | ACTTGGTATAGTTTTGTTTA+TGG | + | chr6_1:12277281-12277300 | Msa0875620:intron | 25.0% |
| !!! | CTTGGTATAGTTTTGTTTAT+GGG | + | chr6_1:12277282-12277301 | Msa0875620:intron | 25.0% |
| ! | TTATGTGATTTCTTGTATGT+TGG | + | chr6_1:12277343-12277362 | Msa0875620:intron | 25.0% |
| ! | TTTAGTGATATGTTACCAAA+TGG | + | chr6_1:12277422-12277441 | Msa0875620:intron | 25.0% |
| !!! | TTTTGTTTTGGAGTATTTCT+AGG | + | chr6_1:12277500-12277519 | Msa0875620:intron | 25.0% |
| !! | CTAGGATGTATTTTCTTTTT+TGG | + | chr6_1:12277553-12277572 | Msa0875620:intron | 25.0% |
| !! | TCATTTAGAAAAGTACAAAC+AGG | - | chr6_1:12277598-12277617 | None:intergenic | 25.0% |
| ! | AATAAAAGAAAGAATCCAGT+TGG | + | chr6_1:12277635-12277654 | Msa0875620:intron | 25.0% |
| ! | ATAAAAGAAAGAATCCAGTT+GGG | + | chr6_1:12277636-12277655 | Msa0875620:intron | 25.0% |
| ! | ACATTAGATAAACAACTTCA+TGG | + | chr6_1:12277807-12277826 | Msa0875620:CDS | 25.0% |
| ! | GAAACATAAACAATGAAGTA+TGG | - | chr6_1:12277868-12277887 | None:intergenic | 25.0% |
| ! | GTCATAATCAACTAAGAAAA+AGG | - | chr6_1:12278405-12278424 | None:intergenic | 25.0% |
| !! | TTTTCTTAGTTGATTATGAC+TGG | + | chr6_1:12278405-12278424 | Msa0875620:three_prime_UTR | 25.0% |
| ! | GTATTCATAAGTACAAACAA+AGG | - | chr6_1:12278432-12278451 | None:intergenic | 25.0% |
| ! | TGTATATAACAAGAAGTTTC+TGG | + | chr6_1:12278486-12278505 | Msa0875620:three_prime_UTR | 25.0% |
| TCAGACACACTTTATAGTTA+AGG | + | chr6_1:12272270-12272289 | Msa0875620:five_prime_UTR | 30.0% | |
| !!! | CTTCAATTTTGGTTCCAAAT+TGG | - | chr6_1:12272459-12272478 | None:intergenic | 30.0% |
| AGAAAGAAAAAAACAATGGC+AGG | + | chr6_1:12272537-12272556 | Msa0875620:exon | 30.0% | |
| !!! | AACGTAGGTTTTTTGAGAAT+CGG | - | chr6_1:12272649-12272668 | None:intergenic | 30.0% |
| ! | GAAATGGAATTGTTAGGTTT+TGG | + | chr6_1:12272898-12272917 | Msa0875620:intron | 30.0% |
| AAGCTATCATGAAAAGCTTA+TGG | + | chr6_1:12273648-12273667 | Msa0875620:intron | 30.0% | |
| GTAGTTGTTTGTCAATTTAG+TGG | + | chr6_1:12274165-12274184 | Msa0875620:intron | 30.0% | |
| !! | ATTTTTGAGCCAGTCAATTT+TGG | + | chr6_1:12274245-12274264 | Msa0875620:intron | 30.0% |
| AGTTTCATACCAAAATTGAC+TGG | - | chr6_1:12274257-12274276 | None:intergenic | 30.0% | |
| ! | GGTCGAAGATTTTCAATTTT+AGG | + | chr6_1:12274295-12274314 | Msa0875620:intron | 30.0% |
| TGAAATTGCAGTAGACAATT+TGG | - | chr6_1:12274352-12274371 | None:intergenic | 30.0% | |
| AAATTGTCTACTGCAATTTC+AGG | + | chr6_1:12274351-12274370 | Msa0875620:intron | 30.0% | |
| AATTGTCTACTGCAATTTCA+GGG | + | chr6_1:12274352-12274371 | Msa0875620:intron | 30.0% | |
| ! | CTTGATTTTATTCTCGCAAT+TGG | - | chr6_1:12274505-12274524 | None:intergenic | 30.0% |
| CAATTGCGAGAATAAAATCA+AGG | + | chr6_1:12274503-12274522 | Msa0875620:CDS | 30.0% | |
| !!! | GTGGTTTGCTATGTATTTTT+GGG | + | chr6_1:12274660-12274679 | Msa0875620:intron | 30.0% |
| !!! | TGTTGTTGATTCGTATGTTT+TGG | + | chr6_1:12274718-12274737 | Msa0875620:intron | 30.0% |
| !!! | GTTGTTGATTCGTATGTTTT+GGG | + | chr6_1:12274719-12274738 | Msa0875620:intron | 30.0% |
| !!! | TTGTTGATTCGTATGTTTTG+GGG | + | chr6_1:12274720-12274739 | Msa0875620:intron | 30.0% |
| ATGAAATTGAAAAGAAGCTG+AGG | + | chr6_1:12274755-12274774 | Msa0875620:CDS | 30.0% | |
| TGAAATTGAAAAGAAGCTGA+GGG | + | chr6_1:12274756-12274775 | Msa0875620:CDS | 30.0% | |
| TTATTCAGTCAGCTATTCTA+GGG | + | chr6_1:12275068-12275087 | Msa0875620:intron | 30.0% | |
| GAATTGATGAAAACAGCTTA+TGG | - | chr6_1:12275321-12275340 | None:intergenic | 30.0% | |
| TCAAATAAGCCAATCTAAAC+AGG | + | chr6_1:12275380-12275399 | Msa0875620:intron | 30.0% | |
| TCAATAAGCTAGAGGAAATA+GGG | - | chr6_1:12275406-12275425 | None:intergenic | 30.0% | |
| TTCAATAAGCTAGAGGAAAT+AGG | - | chr6_1:12275407-12275426 | None:intergenic | 30.0% | |
| TCTTCTGTCAAGTATCAATT+CGG | + | chr6_1:12275506-12275525 | Msa0875620:intron | 30.0% | |
| AGACTAATTCGATACATTCA+AGG | + | chr6_1:12275554-12275573 | Msa0875620:intron | 30.0% | |
| AAGGACTTATTTAGCTGATT+AGG | + | chr6_1:12275573-12275592 | Msa0875620:intron | 30.0% | |
| TTAGGTGTATTTAGAGACAT+TGG | + | chr6_1:12275591-12275610 | Msa0875620:intron | 30.0% | |
| TAGGTGTATTTAGAGACATT+GGG | + | chr6_1:12275592-12275611 | Msa0875620:intron | 30.0% | |
| !!! | ATTACCTCTGTTTTTATGCT+TGG | - | chr6_1:12275786-12275805 | None:intergenic | 30.0% |
| CATAAAAACAGAGGTAATAG+AGG | + | chr6_1:12275788-12275807 | Msa0875620:intron | 30.0% | |
| GCAACAAAATAAAGAAACAG+AGG | + | chr6_1:12275828-12275847 | Msa0875620:intron | 30.0% | |
| AAAAACGGCAAAAAAAACAG+AGG | + | chr6_1:12275860-12275879 | Msa0875620:intron | 30.0% | |
| !!! | CGCTATTTTTCAAAAGAAAC+AGG | - | chr6_1:12276328-12276347 | None:intergenic | 30.0% |
| AGAAAATAGAGGAAAAACAG+AGG | + | chr6_1:12276482-12276501 | Msa0875620:intron | 30.0% | |
| AAAATGAACCTGAGTAAAGT+CGG | + | chr6_1:12276559-12276578 | Msa0875620:intron | 30.0% | |
| ! | ATTATTGTTTCAGTTCTGGT+AGG | - | chr6_1:12276827-12276846 | None:intergenic | 30.0% |
| ! | TTATTTTCAGAGTTCAATGG+AGG | + | chr6_1:12276890-12276909 | Msa0875620:intron | 30.0% |
| GGATCAAAAGAAACAAACAA+AGG | - | chr6_1:12277074-12277093 | None:intergenic | 30.0% | |
| AAATACAAAAAAGGCAAGGA+AGG | - | chr6_1:12277095-12277114 | None:intergenic | 30.0% | |
| !!! | TTCCTTGCCTTTTTTGTATT+TGG | + | chr6_1:12277094-12277113 | Msa0875620:intron | 30.0% |
| AACCAAATACAAAAAAGGCA+AGG | - | chr6_1:12277099-12277118 | None:intergenic | 30.0% | |
| TCTGTACTTAATGTGTACAT+CGG | + | chr6_1:12277137-12277156 | Msa0875620:intron | 30.0% | |
| ! | GTCAAGAACTTGTTTATAGT+AGG | + | chr6_1:12277209-12277228 | Msa0875620:intron | 30.0% |
| ACATGCAGAATAAAACCATT+TGG | - | chr6_1:12277440-12277459 | None:intergenic | 30.0% | |
| TAAAAGAAAGAATCCAGTTG+GGG | + | chr6_1:12277637-12277656 | Msa0875620:intron | 30.0% | |
| CGACTATTTGAATGATTATC+TGG | + | chr6_1:12277970-12277989 | Msa0875620:intron | 30.0% | |
| TTATTAGACTCATCTTCAGA+AGG | - | chr6_1:12278020-12278039 | None:intergenic | 30.0% | |
| TAGTTAAGGAGCAAAGCATA+TGG | + | chr6_1:12272284-12272303 | Msa0875620:five_prime_UTR | 35.0% | |
| TTTAATGGTCGACACCAAAA+TGG | + | chr6_1:12272319-12272338 | Msa0875620:five_prime_UTR | 35.0% | |
| TTTAATGGTCCACACCAATT+TGG | + | chr6_1:12272442-12272461 | Msa0875620:intron | 35.0% | |
| !!! | ATTTTGGTTCCAAATTGGTG+TGG | - | chr6_1:12272454-12272473 | None:intergenic | 35.0% |
| AACCAGAAAGAAAAAGAGAG+AGG | + | chr6_1:12272499-12272518 | Msa0875620:five_prime_UTR | 35.0% | |
| AGAAAGAAAAAGAGAGAGGT+GGG | + | chr6_1:12272503-12272522 | Msa0875620:five_prime_UTR | 35.0% | |
| AATGGCAGGATTATTAGCAT+GGG | + | chr6_1:12272551-12272570 | Msa0875620:exon | 35.0% | |
| AACGTTCGATTCAAGATCTA+CGG | + | chr6_1:12272700-12272719 | Msa0875620:CDS | 35.0% | |
| TGTAGTGAAACTGGTTATTG+TGG | + | chr6_1:12273158-12273177 | Msa0875620:intron | 35.0% | |
| AGTACAGCTTAGATGCTAAA+AGG | - | chr6_1:12273210-12273229 | None:intergenic | 35.0% | |
| TTAGCATCTAAGCTGTACTT+AGG | + | chr6_1:12273211-12273230 | Msa0875620:intron | 35.0% | |
| TAGCATCTAAGCTGTACTTA+GGG | + | chr6_1:12273212-12273231 | Msa0875620:intron | 35.0% | |
| ATGAATCACGAACACAAACA+CGG | - | chr6_1:12273496-12273515 | None:intergenic | 35.0% | |
| TGTTTGTGTTCGTGATTCAT+AGG | + | chr6_1:12273496-12273515 | Msa0875620:intron | 35.0% | |
| GTTTGTGTTCGTGATTCATA+GGG | + | chr6_1:12273497-12273516 | Msa0875620:intron | 35.0% | |
| TGGTTACATTCAACCATGTT+TGG | + | chr6_1:12273527-12273546 | Msa0875620:intron | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr6_1:12273749-12273768 | Msa0875620:intron | 35.0% | |
| CAAATAAGCCAATCCAAACA+GGG | + | chr6_1:12273750-12273769 | Msa0875620:intron | 35.0% | |
| !!! | ATGAGACTGATTTGCTTTTG+TGG | + | chr6_1:12274410-12274429 | Msa0875620:intron | 35.0% |
| !!! | TGATTTGCTTTTGTGGTATG+AGG | + | chr6_1:12274417-12274436 | Msa0875620:intron | 35.0% |
| AATCAAGGAAAAAATGGAGG+AGG | + | chr6_1:12274518-12274537 | Msa0875620:CDS | 35.0% | |
| ATACATAGCAAACCACCAAA+TGG | - | chr6_1:12274656-12274675 | None:intergenic | 35.0% | |
| !!! | GGTGGTTTGCTATGTATTTT+TGG | + | chr6_1:12274659-12274678 | Msa0875620:intron | 35.0% |
| AGCCAATCTTTGATATCTGA+GGG | + | chr6_1:12274820-12274839 | Msa0875620:CDS | 35.0% | |
| AACCCTCAGATATCAAAGAT+TGG | - | chr6_1:12274825-12274844 | None:intergenic | 35.0% | |
| AATCTTTGATATCTGAGGGT+TGG | + | chr6_1:12274824-12274843 | Msa0875620:CDS | 35.0% | |
| ATCTTTGATATCTGAGGGTT+GGG | + | chr6_1:12274825-12274844 | Msa0875620:CDS | 35.0% | |
| CTTATTCAGTCAGCTATTCT+AGG | + | chr6_1:12275067-12275086 | Msa0875620:intron | 35.0% | |
| CTTATCTAGTGGCATAAGTT+TGG | - | chr6_1:12275359-12275378 | None:intergenic | 35.0% | |
| GCTTATTTGAGCTTATCTAG+TGG | - | chr6_1:12275370-12275389 | None:intergenic | 35.0% | |
| ! | AAATGATTGAAGTGGTGTTG+TGG | + | chr6_1:12275467-12275486 | Msa0875620:intron | 35.0% |
| ! | ATTAGTCTCCAATTTCTCGA+GGG | - | chr6_1:12275542-12275561 | None:intergenic | 35.0% |
| ! | AATTAGTCTCCAATTTCTCG+AGG | - | chr6_1:12275543-12275562 | None:intergenic | 35.0% |
| TGATTGATTGCAATGTAGTC+AGG | + | chr6_1:12275622-12275641 | Msa0875620:intron | 35.0% | |
| TTGTGTTTACGTTCTTTCAC+CGG | - | chr6_1:12275674-12275693 | None:intergenic | 35.0% | |
| TAAACACAAGGAACGTAACA+CGG | + | chr6_1:12275685-12275704 | Msa0875620:intron | 35.0% | |
| AGAAAATAGAGGGAAAACAG+AGG | + | chr6_1:12275758-12275777 | Msa0875620:intron | 35.0% | |
| AGGTAATAGAGGAAAAACAG+AGG | + | chr6_1:12275799-12275818 | Msa0875620:intron | 35.0% | |
| TAAAGAAACAGAGGAAACAG+AGG | + | chr6_1:12275837-12275856 | Msa0875620:intron | 35.0% | |
| GGAAAAATGGCAAAAAACAG+AGG | + | chr6_1:12275881-12275900 | Msa0875620:intron | 35.0% | |
| TTAGAGATTAATGCGACCAA+CGG | + | chr6_1:12276018-12276037 | Msa0875620:intron | 35.0% | |
| AGTTCAGAAAGATTTACCGT+TGG | - | chr6_1:12276037-12276056 | None:intergenic | 35.0% | |
| ! | CTAAAGAACTTGATAGCAGT+TGG | + | chr6_1:12276072-12276091 | Msa0875620:intron | 35.0% |
| ! | ATTCATATAATGGAAAGGGG+AGG | + | chr6_1:12276125-12276144 | Msa0875620:intron | 35.0% |
| CAGTGCATGCATCATAAAAT+TGG | - | chr6_1:12276269-12276288 | None:intergenic | 35.0% | |
| TTAGTTGAAGGAAATGGGTA+AGG | - | chr6_1:12276356-12276375 | None:intergenic | 35.0% | |
| TCATGATCAAGATCCTAAGT+AGG | + | chr6_1:12276403-12276422 | Msa0875620:intron | 35.0% | |
| ATCAAGATCCTAAGTAGGAT+TGG | + | chr6_1:12276408-12276427 | Msa0875620:intron | 35.0% | |
| ACAAGCACACAAAAAAACAG+AGG | + | chr6_1:12276507-12276526 | Msa0875620:intron | 35.0% | |
| TAAGATATAATACCTGGGGA+AGG | - | chr6_1:12276975-12276994 | None:intergenic | 35.0% | |
| ! | TTGTATTTGGTTGCTTTAGG+TGG | + | chr6_1:12277107-12277126 | Msa0875620:intron | 35.0% |
| ! | TGCAAAATGCCATTTGAACT+TGG | + | chr6_1:12277264-12277283 | Msa0875620:intron | 35.0% |
| !!! | ACTCTTGTTGGGTTTTGTTT+TGG | + | chr6_1:12277488-12277507 | Msa0875620:intron | 35.0% |
| !!! | GTTTTGGAGTATTTCTAGGT+TGG | + | chr6_1:12277504-12277523 | Msa0875620:intron | 35.0% |
| AAAAGAAAGAATCCAGTTGG+GGG | + | chr6_1:12277638-12277657 | Msa0875620:intron | 35.0% | |
| ATAAGATTACGGAGATGGAA+CGG | - | chr6_1:12277675-12277694 | None:intergenic | 35.0% | |
| AAACGATAAGATTACGGAGA+TGG | - | chr6_1:12277680-12277699 | None:intergenic | 35.0% | |
| GCTGCAAAACAAGTTAAGAA+AGG | - | chr6_1:12277774-12277793 | None:intergenic | 35.0% | |
| CTTTCTATCGCCACAAAAAA+TGG | + | chr6_1:12277930-12277949 | Msa0875620:intron | 35.0% | |
| AATTTCTTCAAGTAAGCCCT+CGG | - | chr6_1:12278074-12278093 | None:intergenic | 35.0% | |
| TGGAAAGATTGAATGCACAA+TGG | + | chr6_1:12278113-12278132 | Msa0875620:CDS | 35.0% | |
| !! | GCTAGAAATCGTTTTGTTAG+AGG | + | chr6_1:12278172-12278191 | Msa0875620:CDS | 35.0% |
| ! | TGATAAGGTACATGGTTTGT+CGG | + | chr6_1:12278201-12278220 | Msa0875620:CDS | 35.0% |
| ! | CACCTCTCTCTTTTTCTTTC+TGG | - | chr6_1:12272504-12272523 | None:intergenic | 40.0% |
| CAGAAAGAAAAAGAGAGAGG+TGG | + | chr6_1:12272502-12272521 | Msa0875620:five_prime_UTR | 40.0% | |
| CAATGGCAGGATTATTAGCA+TGG | + | chr6_1:12272550-12272569 | Msa0875620:exon | 40.0% | |
| TGAGAATCGGAGAAGAGAAT+TGG | - | chr6_1:12272636-12272655 | None:intergenic | 40.0% | |
| !! | ACGTTGGAGAGAGTTAGTTT+TGG | - | chr6_1:12272685-12272704 | None:intergenic | 40.0% |
| GTAGATCTTGAATCGAACGT+TGG | - | chr6_1:12272701-12272720 | None:intergenic | 40.0% | |
| AGAGAATGAGCATGAAGATG+AGG | - | chr6_1:12272762-12272781 | None:intergenic | 40.0% | |
| AACGATACATACCTGATGTC+TGG | - | chr6_1:12272832-12272851 | None:intergenic | 40.0% | |
| TGTTGGACATTGACACTTGT+CGG | - | chr6_1:12273039-12273058 | None:intergenic | 40.0% | |
| CACGCTAAATGTAGTGAAAC+TGG | + | chr6_1:12273149-12273168 | Msa0875620:intron | 40.0% | |
| AGCATCTAAGCTGTACTTAG+GGG | + | chr6_1:12273213-12273232 | Msa0875620:intron | 40.0% | |
| TTGAAAATGCTCGGCTACAT+TGG | + | chr6_1:12274221-12274240 | Msa0875620:intron | 40.0% | |
| ! | ACTGTTTGGAATGACTGATG+TGG | + | chr6_1:12274274-12274293 | Msa0875620:intron | 40.0% |
| ATTACTACGGACCAAGTTAG+AGG | + | chr6_1:12274545-12274564 | Msa0875620:CDS | 40.0% | |
| !!! | ATTCGTATGTTTTGGGGTAC+AGG | + | chr6_1:12274726-12274745 | Msa0875620:intron | 40.0% |
| CTCAGATATCAAAGATTGGC+TGG | - | chr6_1:12274821-12274840 | None:intergenic | 40.0% | |
| CAGCCAATCTTTGATATCTG+AGG | + | chr6_1:12274819-12274838 | Msa0875620:CDS | 40.0% | |
| TCATATACTATGGGCCTGTT+TGG | + | chr6_1:12275110-12275129 | Msa0875620:intron | 40.0% | |
| ! | TAAGTTTGGTGAGACTGTTC+AGG | - | chr6_1:12275345-12275364 | None:intergenic | 40.0% |
| GAAATAGGGCCTGTTTAGAT+TGG | - | chr6_1:12275392-12275411 | None:intergenic | 40.0% | |
| ! | AGATTAGTCCCTCGAGAAAT+TGG | + | chr6_1:12275531-12275550 | Msa0875620:intron | 40.0% |
| GGTGAAAGAACGTAAACACA+AGG | + | chr6_1:12275673-12275692 | Msa0875620:intron | 40.0% | |
| CAGAGGAAACAGAGGAAAAA+CGG | + | chr6_1:12275845-12275864 | Msa0875620:intron | 40.0% | |
| GACATGCTATATTTCGTTCG+AGG | + | chr6_1:12276157-12276176 | Msa0875620:intron | 40.0% | |
| ! | AGATCCTAAGTAGGATTGGT+CGG | + | chr6_1:12276412-12276431 | Msa0875620:intron | 40.0% |
| GTGACGCTTGCATTAATTGT+TGG | + | chr6_1:12276781-12276800 | Msa0875620:intron | 40.0% | |
| CTTAATGTGTACATCGGTCA+TGG | + | chr6_1:12277143-12277162 | Msa0875620:intron | 40.0% | |
| CAGTGTGATCGATCAATCAA+AGG | - | chr6_1:12277180-12277199 | None:intergenic | 40.0% | |
| ATGCAGACAGAAACTCTTGT+TGG | + | chr6_1:12277476-12277495 | Msa0875620:intron | 40.0% | |
| TGCAGACAGAAACTCTTGTT+GGG | + | chr6_1:12277477-12277496 | Msa0875620:intron | 40.0% | |
| ! | TTTCTAGGTTGGACATGTAG+AGG | + | chr6_1:12277515-12277534 | Msa0875620:intron | 40.0% |
| ! | TTCTAGGTTGGACATGTAGA+GGG | + | chr6_1:12277516-12277535 | Msa0875620:intron | 40.0% |
| !! | AAGTACAAACAGGAGCATCA+GGG | - | chr6_1:12277588-12277607 | None:intergenic | 40.0% |
| !! | AAAGTACAAACAGGAGCATC+AGG | - | chr6_1:12277589-12277608 | None:intergenic | 40.0% |
| TCAGCAACTAGCAGTTAAAC+AGG | + | chr6_1:12277836-12277855 | Msa0875620:CDS | 40.0% | |
| !!! | TCAACCATCGCCATTTTTTG+TGG | - | chr6_1:12277943-12277962 | None:intergenic | 40.0% |
| TGAAGAAATTCACCCGAAAG+AGG | + | chr6_1:12278084-12278103 | Msa0875620:CDS | 40.0% | |
| CAAACCATGTACCTTATCAG+AGG | - | chr6_1:12278200-12278219 | None:intergenic | 40.0% | |
| ! | CATGGTTTGTCGGATTATGA+TGG | + | chr6_1:12278211-12278230 | Msa0875620:CDS | 40.0% |
| GCAGATGTAGTAGGAGGAAA+CGG | + | chr6_1:12272576-12272595 | Msa0875620:CDS | 45.0% | |
| TCATTCCTCAACCAGACATC+AGG | + | chr6_1:12272818-12272837 | Msa0875620:CDS | 45.0% | |
| ACATACCTGATGTCTGGTTG+AGG | - | chr6_1:12272826-12272845 | None:intergenic | 45.0% | |
| CAAGTGTCAATGTCCAACAC+CGG | + | chr6_1:12273040-12273059 | Msa0875620:intron | 45.0% | |
| GTATTTAGTCAATGCCGTGC+CGG | - | chr6_1:12273062-12273081 | None:intergenic | 45.0% | |
| TAGCGTGTATGAGTGAAGCA+CGG | - | chr6_1:12273136-12273155 | None:intergenic | 45.0% | |
| TTCTGATTGAAGACGTGTCC+TGG | + | chr6_1:12273367-12273386 | Msa0875620:intron | 45.0% | |
| GTGATTCATAGGGCAGCATA+TGG | + | chr6_1:12273507-12273526 | Msa0875620:intron | 45.0% | |
| GATTGAGACCCTGTTTGGAT+TGG | - | chr6_1:12273761-12273780 | None:intergenic | 45.0% | |
| GAAGTGATTGAGACCCTGTT+TGG | - | chr6_1:12273766-12273785 | None:intergenic | 45.0% | |
| ! | TGCTTTTGTGGTATGAGGAC+AGG | + | chr6_1:12274422-12274441 | Msa0875620:intron | 45.0% |
| TGGAGGAGGCTGAATTACTA+CGG | + | chr6_1:12274532-12274551 | Msa0875620:CDS | 45.0% | |
| ! | GTGTGTGTATGTGTGCCATT+TGG | + | chr6_1:12274638-12274657 | Msa0875620:intron | 45.0% |
| !! | TGTGTATGTGTGCCATTTGG+TGG | + | chr6_1:12274641-12274660 | Msa0875620:intron | 45.0% |
| !!! | ATGTTTTGGGGTACAGGAGA+TGG | + | chr6_1:12274732-12274751 | Msa0875620:intron | 45.0% |
| TTTGATATCTGAGGGTTGGG+AGG | + | chr6_1:12274828-12274847 | Msa0875620:CDS | 45.0% | |
| GGATGAGAAGAAGAAAGAGC+TGG | + | chr6_1:12274927-12274946 | Msa0875620:CDS | 45.0% | |
| GATCGAGATCCTACTAGGAT+CGG | + | chr6_1:12275644-12275663 | Msa0875620:intron | 45.0% | |
| ACGTAACACGGTTCGTAAGT+AGG | + | chr6_1:12275697-12275716 | Msa0875620:intron | 45.0% | |
| ACACGGTTCGTAAGTAGGAT+TGG | + | chr6_1:12275702-12275721 | Msa0875620:intron | 45.0% | |
| ! | GGTTCGTAAGTAGGATTGGT+AGG | + | chr6_1:12275706-12275725 | Msa0875620:intron | 45.0% |
| GGAGCCAAGCATAAAAACAG+AGG | + | chr6_1:12275779-12275798 | Msa0875620:intron | 45.0% | |
| GCTTCGACTTTACTCTGGTT+CGG | - | chr6_1:12275920-12275939 | None:intergenic | 45.0% | |
| ATCGTGCTTCGACTTTACTC+TGG | - | chr6_1:12275925-12275944 | None:intergenic | 45.0% | |
| !! | TTGCGGCTTTGCATTTTGAC+TGG | + | chr6_1:12276739-12276758 | Msa0875620:intron | 45.0% |
| ! | ATGTGTGTCGGTGTATGTGA+AGG | + | chr6_1:12277013-12277032 | Msa0875620:intron | 45.0% |
| CGATCAATCAAAGGTTCCAG+AGG | - | chr6_1:12277171-12277190 | None:intergenic | 45.0% | |
| !! | AGTACAAACAGGAGCATCAG+GGG | - | chr6_1:12277587-12277606 | None:intergenic | 45.0% |
| ATCGCCACAAAAAATGGCGA+TGG | + | chr6_1:12277936-12277955 | Msa0875620:intron | 45.0% | |
| AGAAATTCACCCGAAAGAGG+TGG | + | chr6_1:12278087-12278106 | Msa0875620:CDS | 45.0% | |
| TGTTAGAGGCTCCTCTGATA+AGG | + | chr6_1:12278186-12278205 | Msa0875620:CDS | 45.0% | |
| CGGATTATGATGGTCATCAG+AGG | + | chr6_1:12278221-12278240 | Msa0875620:CDS | 45.0% | |
| TTTCAGTTCTGCCTGCAGAA+TGG | - | chr6_1:12278255-12278274 | None:intergenic | 45.0% | |
| TAAGTAGCATAAGCCTCTGC+TGG | - | chr6_1:12278279-12278298 | None:intergenic | 45.0% | |
| ! | AGCAGAGGCTTATGCTACTT+AGG | + | chr6_1:12278278-12278297 | Msa0875620:CDS | 45.0% |
| ! | GAGGCTTATGCTACTTAGGT+CGG | + | chr6_1:12278282-12278301 | Msa0875620:CDS | 45.0% |
| !!! | AAATATATTAAAATCAATTT+TGG | - | chr6_1:12272347-12272366 | None:intergenic | 5.0% |
| !!! | TAATAAGATAATTTTAATTT+TGG | - | chr6_1:12278367-12278386 | None:intergenic | 5.0% |
| GATGTAGTAGGAGGAAACGG+AGG | + | chr6_1:12272579-12272598 | Msa0875620:CDS | 50.0% | |
| GGAATCGAGTTCACGAACGT+AGG | - | chr6_1:12272664-12272683 | None:intergenic | 50.0% | |
| AGACGCTGAGAGATATCAGG+AGG | - | chr6_1:12272738-12272757 | None:intergenic | 50.0% | |
| GGAAGACGCTGAGAGATATC+AGG | - | chr6_1:12272741-12272760 | None:intergenic | 50.0% | |
| GCACGGACACTTCTGATTGA+AGG | + | chr6_1:12272997-12273016 | Msa0875620:intron | 50.0% | |
| TGGACATTGACACTTGTCGG+TGG | - | chr6_1:12273036-12273055 | None:intergenic | 50.0% | |
| ATGACACCACCTGTGTTGCA+CGG | + | chr6_1:12273340-12273359 | Msa0875620:intron | 50.0% | |
| AAGTTTCCGTGCAACACAGG+TGG | - | chr6_1:12273349-12273368 | None:intergenic | 50.0% | |
| CAGAAGTTTCCGTGCAACAC+AGG | - | chr6_1:12273352-12273371 | None:intergenic | 50.0% | |
| CACTAGACACGATCCTGACA+CGG | - | chr6_1:12273472-12273491 | None:intergenic | 50.0% | |
| CAGCGTCTCTTCTCTAAGCT+GGG | - | chr6_1:12274448-12274467 | None:intergenic | 50.0% | |
| TCAGCGTCTCTTCTCTAAGC+TGG | - | chr6_1:12274449-12274468 | None:intergenic | 50.0% | |
| GCTTAGAGAAGAGACGCTGA+AGG | + | chr6_1:12274449-12274468 | Msa0875620:CDS | 50.0% | |
| CCTCAGTCTCACCTCTAACT+TGG | - | chr6_1:12274559-12274578 | None:intergenic | 50.0% | |
| CCAAGTTAGAGGTGAGACTG+AGG | + | chr6_1:12274556-12274575 | Msa0875620:intron | 50.0% | |
| GTCAGGATCGAGATCCTACT+AGG | + | chr6_1:12275639-12275658 | Msa0875620:intron | 50.0% | |
| GAGATCCTACTAGGATCGGT+CGG | + | chr6_1:12275648-12275667 | Msa0875620:intron | 50.0% | |
| GTAAAGTCGAAGCACGATCG+AGG | + | chr6_1:12275927-12275946 | Msa0875620:intron | 50.0% | |
| ATCGTGCGATCCTATGACCT+GGG | + | chr6_1:12275966-12275985 | Msa0875620:intron | 50.0% | |
| AAGATCGAGTCCCAGGTCAT+AGG | - | chr6_1:12275979-12275998 | None:intergenic | 50.0% | |
| TATGACCTGGGACTCGATCT+TGG | + | chr6_1:12275978-12275997 | Msa0875620:intron | 50.0% | |
| ACAACCTACCGATCCTTCAC+CGG | - | chr6_1:12276438-12276457 | None:intergenic | 50.0% | |
| ACCTGAGTAAAGTCGGAGCA+CGG | + | chr6_1:12276566-12276585 | Msa0875620:intron | 50.0% | |
| TACATCGGTCATGGATCCTC+TGG | + | chr6_1:12277152-12277171 | Msa0875620:intron | 50.0% | |
| GTTGGACATGTAGAGGGACT+AGG | + | chr6_1:12277522-12277541 | Msa0875620:intron | 50.0% | |
| !!! | AGGGACTAGGCTGCTTTTCT+AGG | + | chr6_1:12277535-12277554 | Msa0875620:intron | 50.0% |
| !! | GTACAAACAGGAGCATCAGG+GGG | - | chr6_1:12277586-12277605 | None:intergenic | 50.0% |
| AGAAAGAATCCAGTTGGGGG+TGG | + | chr6_1:12277641-12277660 | Msa0875620:intron | 50.0% | |
| TTGCTTTCAGACACAAGCCG+AGG | + | chr6_1:12278054-12278073 | Msa0875620:intron | 50.0% | |
| TGCTTTCAGACACAAGCCGA+GGG | + | chr6_1:12278055-12278074 | Msa0875620:intron | 50.0% | |
| TTTCCAGCTCCACCTCTTTC+GGG | - | chr6_1:12278099-12278118 | None:intergenic | 50.0% | |
| CTTTCCAGCTCCACCTCTTT+CGG | - | chr6_1:12278100-12278119 | None:intergenic | 50.0% | |
| GGCTCCTCTGATAAGGTACA+TGG | + | chr6_1:12278193-12278212 | Msa0875620:CDS | 50.0% | |
| AGGCTTCCATACCATTCTGC+AGG | + | chr6_1:12278241-12278260 | Msa0875620:CDS | 50.0% | |
| GTTCTGCCTGCAGAATGGTA+TGG | - | chr6_1:12278250-12278269 | None:intergenic | 50.0% | |
| GCATGGGCAGCAGATGTAGT+AGG | + | chr6_1:12272567-12272586 | Msa0875620:CDS | 55.0% | |
| TGGGCAGCAGATGTAGTAGG+AGG | + | chr6_1:12272570-12272589 | Msa0875620:CDS | 55.0% | |
| CGCTGAGAGATATCAGGAGG+AGG | - | chr6_1:12272735-12272754 | None:intergenic | 55.0% | |
| GACACTTGTCGGTGGTCACA+AGG | - | chr6_1:12273028-12273047 | None:intergenic | 55.0% | |
| GTCAATGTCCAACACCGGCA+CGG | + | chr6_1:12273045-12273064 | Msa0875620:intron | 55.0% | |
| CTGTGTCTAGTGTCCGTGTC+AGG | + | chr6_1:12273456-12273475 | Msa0875620:intron | 55.0% | |
| AAAGAAGCTGAGGGCTGAGC+TGG | + | chr6_1:12274765-12274784 | Msa0875620:CDS | 55.0% | |
| GATCGTGCGATCCTATGACC+TGG | + | chr6_1:12275965-12275984 | Msa0875620:intron | 55.0% | |
| TGTAGCCAAGATCGAGTCCC+AGG | - | chr6_1:12275986-12276005 | None:intergenic | 55.0% | |
| !! | CCTAAGTAGGATTGGTCGGC+CGG | + | chr6_1:12276416-12276435 | Msa0875620:intron | 55.0% |
| ACCGTGCTCCGACTTTACTC+AGG | - | chr6_1:12276570-12276589 | None:intergenic | 55.0% | |
| GTAAAGTCGGAGCACGGTTG+AGG | + | chr6_1:12276572-12276591 | Msa0875620:intron | 55.0% | |
| !! | GAAGAAATGGGCTGCAGTGC+AGG | + | chr6_1:12276932-12276951 | Msa0875620:CDS | 55.0% |
| GCACTTAAACAGCCTTCCCC+AGG | + | chr6_1:12276960-12276979 | Msa0875620:CDS | 55.0% | |
| GAATCAAAGCCACCCCCAAC+TGG | - | chr6_1:12277653-12277672 | None:intergenic | 55.0% | |
| GCAGAACTGAAAGCCAGCAG+AGG | + | chr6_1:12278263-12278282 | Msa0875620:CDS | 55.0% | |
| CACACACACACACACACACG+AGG | - | chr6_1:12278454-12278473 | None:intergenic | 55.0% | |
| ! | AGTCAATGCCGTGCCGGTGT+TGG | - | chr6_1:12273056-12273075 | None:intergenic | 60.0% |
| CACGATGCGTGTCTGACACC+AGG | - | chr6_1:12273388-12273407 | None:intergenic | 60.0% | |
| TCCTACTAGGATCGGTCGGC+CGG | + | chr6_1:12275652-12275671 | Msa0875620:intron | 60.0% | |
| !! | GAAGCACGATCGAGGTGCTG+TGG | + | chr6_1:12275935-12275954 | Msa0875620:intron | 60.0% |
| CCGGCCGACCAATCCTACTT+AGG | - | chr6_1:12276419-12276438 | None:intergenic | 60.0% | |
| !! | TAGGATTGGTCGGCCGGTGA+AGG | + | chr6_1:12276422-12276441 | Msa0875620:intron | 60.0% |
| TTGGTCGGCCGGTGAAGGAT+CGG | + | chr6_1:12276427-12276446 | Msa0875620:intron | 60.0% | |
| GAGCACGGTTGAGGTGACGT+GGG | + | chr6_1:12276581-12276600 | Msa0875620:intron | 60.0% | |
| TCACCCGAAAGAGGTGGAGC+TGG | + | chr6_1:12278093-12278112 | Msa0875620:CDS | 60.0% | |
| ACCGGCCGACCGATCCTAGT+AGG | - | chr6_1:12275656-12275675 | None:intergenic | 65.0% | |
| TCGGCCGGTGAAGGATCGGT+AGG | + | chr6_1:12276431-12276450 | Msa0875620:intron | 65.0% | |
| GGAGCACGGTTGAGGTGACG+TGG | + | chr6_1:12276580-12276599 | Msa0875620:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 12272263 | 12278512 | 12272263 | ID=Msa0875620;Name=Msa0875620 |
| chr6_1 | mRNA | 12272263 | 12278512 | 12272263 | ID=Msa0875620-mRNA-1;Parent=Msa0875620;Name=Msa0875620-mRNA-1;_AED=0.06;_eAED=0.06;_QI=166|1|1|1|0.83|0.71|7|149|352 |
| chr6_1 | exon | 12272263 | 12272340 | 12272263 | ID=Msa0875620-mRNA-1:exon:3665;Parent=Msa0875620-mRNA-1 |
| chr6_1 | exon | 12272464 | 12272839 | 12272464 | ID=Msa0875620-mRNA-1:exon:3666;Parent=Msa0875620-mRNA-1 |
| chr6_1 | exon | 12274444 | 12274566 | 12274444 | ID=Msa0875620-mRNA-1:exon:3667;Parent=Msa0875620-mRNA-1 |
| chr6_1 | exon | 12274748 | 12274948 | 12274748 | ID=Msa0875620-mRNA-1:exon:3668;Parent=Msa0875620-mRNA-1 |
| chr6_1 | exon | 12276900 | 12276981 | 12276900 | ID=Msa0875620-mRNA-1:exon:3669;Parent=Msa0875620-mRNA-1 |
| chr6_1 | exon | 12277793 | 12277857 | 12277793 | ID=Msa0875620-mRNA-1:exon:3670;Parent=Msa0875620-mRNA-1 |
| chr6_1 | exon | 12278064 | 12278512 | 12278064 | ID=Msa0875620-mRNA-1:exon:3671;Parent=Msa0875620-mRNA-1 |
| chr6_1 | five_prime_UTR | 12272263 | 12272340 | 12272263 | ID=Msa0875620-mRNA-1:five_prime_utr;Parent=Msa0875620-mRNA-1 |
| chr6_1 | five_prime_UTR | 12272464 | 12272551 | 12272464 | ID=Msa0875620-mRNA-1:five_prime_utr;Parent=Msa0875620-mRNA-1 |
| chr6_1 | CDS | 12272552 | 12272839 | 12272552 | ID=Msa0875620-mRNA-1:cds;Parent=Msa0875620-mRNA-1 |
| chr6_1 | CDS | 12274444 | 12274566 | 12274444 | ID=Msa0875620-mRNA-1:cds;Parent=Msa0875620-mRNA-1 |
| chr6_1 | CDS | 12274748 | 12274948 | 12274748 | ID=Msa0875620-mRNA-1:cds;Parent=Msa0875620-mRNA-1 |
| chr6_1 | CDS | 12276900 | 12276981 | 12276900 | ID=Msa0875620-mRNA-1:cds;Parent=Msa0875620-mRNA-1 |
| chr6_1 | CDS | 12277793 | 12277857 | 12277793 | ID=Msa0875620-mRNA-1:cds;Parent=Msa0875620-mRNA-1 |
| chr6_1 | CDS | 12278064 | 12278363 | 12278064 | ID=Msa0875620-mRNA-1:cds;Parent=Msa0875620-mRNA-1 |
| chr6_1 | three_prime_UTR | 12278364 | 12278512 | 12278364 | ID=Msa0875620-mRNA-1:three_prime_utr;Parent=Msa0875620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
