Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002060 | Msa0017760 | 0.808342 | 3.246289e-50 | -8.615850e-47 |
| Msa0012460 | Msa0017760 | 0.836194 | 1.079544e-56 | -8.615850e-47 |
| Msa0016160 | Msa0017760 | 0.808837 | 2.545809e-50 | -8.615850e-47 |
| Msa0017120 | Msa0017760 | 0.807359 | 5.252347e-50 | -8.615850e-47 |
| Msa0017760 | Msa0034320 | 0.819070 | 1.408473e-52 | -8.615850e-47 |
| Msa0017760 | Msa0043680 | 0.805974 | 1.029954e-49 | -8.615850e-47 |
| Msa0017760 | Msa0049990 | 0.824332 | 8.547483e-54 | -8.615850e-47 |
| Msa0017760 | Msa0056130 | 0.811882 | 5.603924e-51 | -8.615850e-47 |
| Msa0017760 | Msa0056160 | 0.814592 | 1.424690e-51 | -8.615850e-47 |
| Msa0017760 | Msa0065390 | 0.814081 | 1.847340e-51 | -8.615850e-47 |
| Msa0017760 | Msa0065690 | 0.817622 | 2.997602e-52 | -8.615850e-47 |
| Msa0017760 | Msa0077910 | 0.813702 | 2.238754e-51 | -8.615850e-47 |
| Msa0017760 | Msa0078090 | 0.810069 | 1.384542e-50 | -8.615850e-47 |
| Msa0017760 | Msa0081300 | 0.803889 | 2.810611e-49 | -8.615850e-47 |
| Msa0017760 | Msa0089210 | 0.823133 | 1.632095e-53 | -8.615850e-47 |
| Msa0017760 | Msa0090800 | 0.814807 | 1.276495e-51 | -8.615850e-47 |
| Msa0017760 | Msa0091550 | 0.844625 | 6.734636e-59 | -8.615850e-47 |
| Msa0017760 | Msa0092660 | 0.819448 | 1.155296e-52 | -8.615850e-47 |
| Msa0017760 | Msa0092680 | 0.809171 | 2.158978e-50 | -8.615850e-47 |
| Msa0017760 | Msa0092730 | 0.815837 | 7.533032e-52 | -8.615850e-47 |
| Msa0017760 | Msa0096830 | 0.806432 | 8.251499e-50 | -8.615850e-47 |
| Msa0017760 | Msa0098190 | 0.973226 | 4.515072e-136 | -8.615850e-47 |
| Msa0017760 | Msa0104190 | 0.816909 | 4.336610e-52 | -8.615850e-47 |
| Msa0017760 | Msa0110710 | 0.806673 | 7.338252e-50 | -8.615850e-47 |
| Msa0017760 | Msa0112290 | 0.811337 | 7.363032e-51 | -8.615850e-47 |
| Msa0017760 | Msa0122210 | 0.802159 | 6.404277e-49 | -8.615850e-47 |
| Msa0017760 | Msa0125800 | 0.815917 | 7.232185e-52 | -8.615850e-47 |
| Msa0017760 | Msa0127080 | 0.803195 | 3.914973e-49 | -8.615850e-47 |
| Msa0017760 | Msa0137600 | 0.808162 | 3.546364e-50 | -8.615850e-47 |
| Msa0017760 | Msa0139050 | 0.810981 | 8.794599e-51 | -8.615850e-47 |
| Msa0017760 | Msa0144340 | 0.819274 | 1.265614e-52 | -8.615850e-47 |
| Msa0017760 | Msa0149070 | 0.816274 | 6.018711e-52 | -8.615850e-47 |
| Msa0017760 | Msa0150210 | 0.802544 | 5.335442e-49 | -8.615850e-47 |
| Msa0017760 | Msa0152380 | 0.834267 | 3.309418e-56 | -8.615850e-47 |
| Msa0017760 | Msa0155550 | 0.806821 | 6.829428e-50 | -8.615850e-47 |
| Msa0017760 | Msa0170440 | 0.814820 | 1.268317e-51 | -8.615850e-47 |
| Msa0017760 | Msa0173610 | 0.816405 | 5.624312e-52 | -8.615850e-47 |
| Msa0017760 | Msa0193000 | 0.801143 | 1.034674e-48 | -8.615850e-47 |
| Msa0017760 | Msa0194570 | 0.821408 | 4.102998e-53 | -8.615850e-47 |
| Msa0017760 | Msa0206940 | 0.802856 | 4.599898e-49 | -8.615850e-47 |
| Msa0017760 | Msa0214730 | 0.809688 | 1.671692e-50 | -8.615850e-47 |
| Msa0017760 | Msa0222070 | 0.808865 | 2.510164e-50 | -8.615850e-47 |
| Msa0017760 | Msa0222120 | 0.808950 | 2.407423e-50 | -8.615850e-47 |
| Msa0017760 | Msa0223280 | 0.801803 | 7.580077e-49 | -8.615850e-47 |
| Msa0017760 | Msa0225010 | 0.806075 | 9.808940e-50 | -8.615850e-47 |
| Msa0017760 | Msa0226800 | 0.808734 | 2.677794e-50 | -8.615850e-47 |
| Msa0017760 | Msa0234930 | 0.801969 | 7.005185e-49 | -8.615850e-47 |
| Msa0017760 | Msa0243160 | 0.803580 | 3.257262e-49 | -8.615850e-47 |
| Msa0017760 | Msa0247310 | 0.851569 | 8.150674e-61 | -8.615850e-47 |
| Msa0017760 | Msa0250520 | 0.804750 | 1.859343e-49 | -8.615850e-47 |
| Msa0017760 | Msa0257130 | 0.839117 | 1.919792e-57 | -8.615850e-47 |
| Msa0017760 | Msa0258380 | 0.814151 | 1.783040e-51 | -8.615850e-47 |
| Msa0017760 | Msa0258410 | 0.808927 | 2.435387e-50 | -8.615850e-47 |
| Msa0017760 | Msa0259980 | 0.803533 | 3.330775e-49 | -8.615850e-47 |
| Msa0017760 | Msa0263620 | 0.807839 | 4.154625e-50 | -8.615850e-47 |
| Msa0017760 | Msa0269830 | 0.819144 | 1.354980e-52 | -8.615850e-47 |
| Msa0017760 | Msa0273270 | 0.804255 | 2.358135e-49 | -8.615850e-47 |
| Msa0017760 | Msa0280120 | 0.821879 | 3.193125e-53 | -8.615850e-47 |
| Msa0017760 | Msa0280140 | 0.803307 | 3.711063e-49 | -8.615850e-47 |
| Msa0017760 | Msa0298970 | 0.801379 | 9.259773e-49 | -8.615850e-47 |
| Msa0017760 | Msa0304870 | 0.815209 | 1.039599e-51 | -8.615850e-47 |
| Msa0017760 | Msa0307620 | 0.986695 | 1.177832e-167 | -8.615850e-47 |
| Msa0017760 | Msa0314790 | 0.821180 | 4.631632e-53 | -8.615850e-47 |
| Msa0017760 | Msa0323990 | 0.801542 | 8.571400e-49 | -8.615850e-47 |
| Msa0017760 | Msa0327900 | 0.803837 | 2.880552e-49 | -8.615850e-47 |
| Msa0017760 | Msa0334780 | 0.851317 | 9.600094e-61 | -8.615850e-47 |
| Msa0017760 | Msa0335740 | 0.819026 | 1.441369e-52 | -8.615850e-47 |
| Msa0017760 | Msa0341260 | 0.814957 | 1.182461e-51 | -8.615850e-47 |
| Msa0017760 | Msa0342620 | 0.812245 | 4.670707e-51 | -8.615850e-47 |
| Msa0017760 | Msa0354490 | 0.816955 | 4.234979e-52 | -8.615850e-47 |
| Msa0017760 | Msa0362840 | 0.827412 | 1.587437e-54 | -8.615850e-47 |
| Msa0017760 | Msa0367370 | 0.807979 | 3.878475e-50 | -8.615850e-47 |
| Msa0017760 | Msa0375430 | 0.814840 | 1.255214e-51 | -8.615850e-47 |
| Msa0017760 | Msa0377560 | 0.811191 | 7.922015e-51 | -8.615850e-47 |
| Msa0017760 | Msa0377630 | 0.811234 | 7.752943e-51 | -8.615850e-47 |
| Msa0017760 | Msa0380360 | 0.844439 | 7.553273e-59 | -8.615850e-47 |
| Msa0017760 | Msa0382500 | 0.814058 | 1.869518e-51 | -8.615850e-47 |
| Msa0017760 | Msa0396970 | 0.801360 | 9.342093e-49 | -8.615850e-47 |
| Msa0017760 | Msa0426480 | 0.802586 | 5.228468e-49 | -8.615850e-47 |
| Msa0017760 | Msa0426730 | 0.805405 | 1.356503e-49 | -8.615850e-47 |
| Msa0017760 | Msa0432390 | 0.802246 | 6.143763e-49 | -8.615850e-47 |
| Msa0017760 | Msa0432680 | 0.819582 | 1.077058e-52 | -8.615850e-47 |
| Msa0017760 | Msa0446480 | 0.818595 | 1.806179e-52 | -8.615850e-47 |
| Msa0017760 | Msa0470030 | 0.804076 | 2.570093e-49 | -8.615850e-47 |
| Msa0017760 | Msa0482960 | 0.821748 | 3.423942e-53 | -8.615850e-47 |
| Msa0017760 | Msa0485280 | 0.839860 | 1.230624e-57 | -8.615850e-47 |
| Msa0017760 | Msa0503120 | 0.816856 | 4.456801e-52 | -8.615850e-47 |
| Msa0017760 | Msa0518160 | 0.808847 | 2.532925e-50 | -8.615850e-47 |
| Msa0017760 | Msa0544780 | 0.806688 | 7.285088e-50 | -8.615850e-47 |
| Msa0017760 | Msa0546740 | 0.803603 | 3.221853e-49 | -8.615850e-47 |
| Msa0017760 | Msa0555940 | 0.829759 | 4.299941e-55 | -8.615850e-47 |
| Msa0017760 | Msa0560200 | 0.800581 | 1.347965e-48 | -8.615850e-47 |
| Msa0017760 | Msa0567290 | 0.855038 | 8.247095e-62 | -8.615850e-47 |
| Msa0017760 | Msa0576420 | 0.807929 | 3.975312e-50 | -8.615850e-47 |
| Msa0017760 | Msa0589290 | 0.800607 | 1.331395e-48 | -8.615850e-47 |
| Msa0017760 | Msa0600390 | 0.813796 | 2.135257e-51 | -8.615850e-47 |
| Msa0017760 | Msa0607300 | 0.827274 | 1.713125e-54 | -8.615850e-47 |
| Msa0017760 | Msa0619060 | 0.801306 | 9.580964e-49 | -8.615850e-47 |
| Msa0017760 | Msa0640880 | 0.826538 | 2.567305e-54 | -8.615850e-47 |
| Msa0017760 | Msa0645820 | 0.813398 | 2.611271e-51 | -8.615850e-47 |
| Msa0017760 | Msa0647750 | 0.803395 | 3.558253e-49 | -8.615850e-47 |
| Msa0017760 | Msa0686740 | 0.826096 | 3.272886e-54 | -8.615850e-47 |
| Msa0017760 | Msa0690350 | 0.800531 | 1.379554e-48 | -8.615850e-47 |
| Msa0017760 | Msa0701320 | 0.800043 | 1.734045e-48 | -8.615850e-47 |
| Msa0017760 | Msa0702070 | 0.808733 | 2.679545e-50 | -8.615850e-47 |
| Msa0017760 | Msa0702120 | 0.817787 | 2.751354e-52 | -8.615850e-47 |
| Msa0017760 | Msa0703760 | 0.832826 | 7.572600e-56 | -8.615850e-47 |
| Msa0017760 | Msa0704570 | 0.818118 | 2.315467e-52 | -8.615850e-47 |
| Msa0017760 | Msa0705250 | 0.807860 | 4.111793e-50 | -8.615850e-47 |
| Msa0017760 | Msa0707780 | 0.807495 | 4.915235e-50 | -8.615850e-47 |
| Msa0017760 | Msa0748890 | 0.821066 | 4.918124e-53 | -8.615850e-47 |
| Msa0017760 | Msa0752290 | 0.812312 | 4.517816e-51 | -8.615850e-47 |
| Msa0017760 | Msa0760080 | 0.809222 | 2.104657e-50 | -8.615850e-47 |
| Msa0017760 | Msa0790180 | 0.826857 | 2.154852e-54 | -8.615850e-47 |
| Msa0017760 | Msa0828810 | 0.803129 | 4.038778e-49 | -8.615850e-47 |
| Msa0017760 | Msa0864150 | 0.805287 | 1.435727e-49 | -8.615850e-47 |
| Msa0017760 | Msa0865280 | 0.803308 | 3.709193e-49 | -8.615850e-47 |
| Msa0017760 | Msa0926090 | 0.823658 | 1.230042e-53 | -8.615850e-47 |
| Msa0017760 | Msa0949780 | 0.800507 | 1.395109e-48 | -8.615850e-47 |
| Msa0017760 | Msa0966410 | 0.816319 | 5.879771e-52 | -8.615850e-47 |
| Msa0017760 | Msa1001780 | 0.802809 | 4.703413e-49 | -8.615850e-47 |
| Msa0017760 | Msa1002980 | 0.818095 | 2.343396e-52 | -8.615850e-47 |
| Msa0017760 | Msa1013510 | 0.812479 | 4.151998e-51 | -8.615850e-47 |
| Msa0017760 | Msa1022310 | 0.814068 | 1.859242e-51 | -8.615850e-47 |
| Msa0017760 | Msa1032970 | 0.809400 | 1.928309e-50 | -8.615850e-47 |
| Msa0017760 | Msa1033120 | 0.807163 | 5.779763e-50 | -8.615850e-47 |
| Msa0017760 | Msa1061180 | 0.806091 | 9.735336e-50 | -8.615850e-47 |
| Msa0017760 | Msa1067430 | 0.832448 | 9.398343e-56 | -8.615850e-47 |
| Msa0017760 | Msa1074730 | 0.800906 | 1.156644e-48 | -8.615850e-47 |
| Msa0017760 | Msa1080620 | 0.826042 | 3.369593e-54 | -8.615850e-47 |
| Msa0017760 | Msa1080690 | 0.819407 | 1.180231e-52 | -8.615850e-47 |
| Msa0017760 | Msa1084150 | 0.800981 | 1.116778e-48 | -8.615850e-47 |
| Msa0017760 | Msa1106560 | 0.802019 | 6.841324e-49 | -8.615850e-47 |
| Msa0017760 | Msa1126310 | 0.837814 | 4.163368e-57 | -8.615850e-47 |
| Msa0017760 | Msa1126910 | 0.812467 | 4.178892e-51 | -8.615850e-47 |
| Msa0017760 | Msa1127510 | 0.810758 | 9.830554e-51 | -8.615850e-47 |
| Msa0017760 | Msa1130660 | 0.814190 | 1.747999e-51 | -8.615850e-47 |
| Msa0017760 | Msa1130730 | 0.816929 | 4.291671e-52 | -8.615850e-47 |
| Msa0017760 | Msa1132820 | 0.816686 | 4.865863e-52 | -8.615850e-47 |
| Msa0017760 | Msa1145370 | 0.805040 | 1.617409e-49 | -8.615850e-47 |
| Msa0017760 | Msa1162470 | 0.806893 | 6.594065e-50 | -8.615850e-47 |
| Msa0017760 | Msa1166180 | 0.820789 | 5.695923e-53 | -8.615850e-47 |
| Msa0017760 | Msa1166280 | 0.823660 | 1.229207e-53 | -8.615850e-47 |
| Msa0017760 | Msa1167160 | 0.837558 | 4.842807e-57 | -8.615850e-47 |
| Msa0017760 | Msa1208630 | 0.817234 | 3.666204e-52 | -8.615850e-47 |
| Msa0017760 | Msa1208750 | 0.843082 | 1.743864e-58 | -8.615850e-47 |
| Msa0017760 | Msa1213540 | 0.804183 | 2.440695e-49 | -8.615850e-47 |
| Msa0017760 | Msa1219250 | 0.816317 | 5.884527e-52 | -8.615850e-47 |
| Msa0017760 | Msa1228950 | 0.803478 | 3.419875e-49 | -8.615850e-47 |
| Msa0017760 | Msa1258940 | 0.812234 | 4.697764e-51 | -8.615850e-47 |
| Msa0017760 | Msa1263030 | 0.803680 | 3.105144e-49 | -8.615850e-47 |
| Msa0017760 | Msa1263590 | 0.806014 | 1.010551e-49 | -8.615850e-47 |
| Msa0017760 | Msa1263670 | 0.805927 | 1.053827e-49 | -8.615850e-47 |
| Msa0017760 | Msa1274740 | 0.807705 | 4.435882e-50 | -8.615850e-47 |
| Msa0017760 | Msa1279340 | 0.845098 | 5.018613e-59 | -8.615850e-47 |
| Msa0017760 | Msa1293530 | 0.816152 | 6.407375e-52 | -8.615850e-47 |
| Msa0017760 | Msa1300880 | 0.810405 | 1.171497e-50 | -8.615850e-47 |
| Msa0017760 | Msa1312730 | 0.801569 | 8.462946e-49 | -8.615850e-47 |
| Msa0017760 | Msa1318180 | 0.805437 | 1.335789e-49 | -8.615850e-47 |
| Msa0017760 | Msa1319520 | 0.807224 | 5.610724e-50 | -8.615850e-47 |
| Msa0017760 | Msa1325650 | 0.841543 | 4.459398e-58 | -8.615850e-47 |
| Msa0017760 | Msa1368730 | 0.806045 | 9.952466e-50 | -8.615850e-47 |
| Msa0017760 | Msa1374810 | 0.806060 | 9.879849e-50 | -8.615850e-47 |
| Msa0017760 | Msa1375120 | 0.814926 | 1.201086e-51 | -8.615850e-47 |
| Msa0017760 | Msa1380720 | 0.804040 | 2.614474e-49 | -8.615850e-47 |
| Msa0017760 | Msa1392680 | 0.801958 | 7.042857e-49 | -8.615850e-47 |
| Msa0017760 | Msa1398740 | 0.811145 | 8.106697e-51 | -8.615850e-47 |
| Msa0017760 | Msa1398840 | 0.818555 | 1.844351e-52 | -8.615850e-47 |
| Msa0017760 | Msa1406230 | 0.812462 | 4.189666e-51 | -8.615850e-47 |
| Msa0017760 | Msa1406880 | 0.805559 | 1.258994e-49 | -8.615850e-47 |
| Msa0017760 | Msa1407710 | 0.838162 | 3.387250e-57 | -8.615850e-47 |
| Msa0017760 | Msa1410170 | 0.831477 | 1.632661e-55 | -8.615850e-47 |
| Msa0017760 | Msa1415250 | 0.832627 | 8.486130e-56 | -8.615850e-47 |
| Msa0017760 | Msa1416460 | 0.826311 | 2.908763e-54 | -8.615850e-47 |
| Msa0017760 | Msa1418200 | 0.817759 | 2.791310e-52 | -8.615850e-47 |
| Msa0017760 | Msa1422490 | 0.809830 | 1.558504e-50 | -8.615850e-47 |
| Msa0017760 | Msa1422500 | 0.803508 | 3.371369e-49 | -8.615850e-47 |
| Msa0017760 | Msa1423550 | 0.804934 | 1.702238e-49 | -8.615850e-47 |
| Msa0017760 | Msa1424240 | 0.801007 | 1.103097e-48 | -8.615850e-47 |
| Msa0017760 | Msa1429390 | 0.804502 | 2.094751e-49 | -8.615850e-47 |
| Msa0017760 | Msa1431960 | 0.817128 | 3.871880e-52 | -8.615850e-47 |
| Msa0017760 | Msa1439800 | 0.818972 | 1.482765e-52 | -8.615850e-47 |
| Msa0017760 | Msa1444090 | 0.803181 | 3.940670e-49 | -8.615850e-47 |
| Msa0017760 | Msa1449600 | 0.822393 | 2.426972e-53 | -8.615850e-47 |
| Msa0017760 | Msa1449680 | 0.817809 | 2.719180e-52 | -8.615850e-47 |
| Msa0017760 | Msa1451840 | 0.803086 | 4.122386e-49 | -8.615850e-47 |
| Msa0017760 | Msa1456830 | 0.832054 | 1.176536e-55 | -8.615850e-47 |
| Msa0017760 | Msa1458330 | 0.843752 | 1.155092e-58 | -8.615850e-47 |
| Msa0017760 | Msa1460650 | 0.816795 | 4.599252e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0017760 | MtrunA17_Chr1g0152021 | 80.531 | 226 | 6 | 1 | 1 | 226 | 1 | 188 | 8.81e-129 | 361 |
| Msa0017760 | MtrunA17_Chr1g0162311 | 23.457 | 162 | 121 | 1 | 46 | 204 | 49 | 210 | 2.03e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0017760 | AT1G49510.2 | 27.344 | 128 | 93 | 0 | 76 | 203 | 30 | 157 | 2.02e-12 | 63.9 |
| Msa0017760 | AT1G49510.3 | 27.344 | 128 | 93 | 0 | 76 | 203 | 88 | 215 | 3.51e-12 | 64.3 |
| Msa0017760 | AT1G49510.1 | 27.344 | 128 | 93 | 0 | 76 | 203 | 88 | 215 | 3.51e-12 | 64.3 |
Find 69 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTCAACTTCCAAGTTTC+GGG | 0.178366 | 1_1:+29664861 | Msa0017760:CDS |
| TTCCTTCAACTTCCAAGTTT+CGG | 0.256394 | 1_1:+29664860 | Msa0017760:CDS |
| TAACTTCATTAGGCTCATTA+TGG | 0.304347 | 1_1:-29666288 | None:intergenic |
| CGAGTATAAAATGTTTGATT+TGG | 0.307830 | 1_1:-29666235 | None:intergenic |
| CTCCAAGGAAATTCTTGAAC+CGG | 0.309185 | 1_1:-29666361 | None:intergenic |
| GATAAATTTCCGAGCATTTA+CGG | 0.310915 | 1_1:-29666210 | None:intergenic |
| CCTTGTGGCTGATTTCTTGA+AGG | 0.337664 | 1_1:+29666546 | Msa0017760:CDS |
| TGATTTGAAATGGCGTCGTT+TGG | 0.340202 | 1_1:+29666705 | Msa0017760:CDS |
| TTCCGGTTTGGAGGCATAGA+TGG | 0.341673 | 1_1:+29666891 | Msa0017760:exon |
| ATTTGTATCTTAACTTCATT+AGG | 0.343357 | 1_1:-29666298 | None:intergenic |
| CATATGCCGCCGCTAATCTA+TGG | 0.351138 | 1_1:-29667116 | None:intergenic |
| TGATGCAGTTACTTTGGTAT+TGG | 0.370619 | 1_1:+29666821 | Msa0017760:CDS |
| ATTCCCGTTGGCCTCTTTGT+TGG | 0.381717 | 1_1:+29666520 | Msa0017760:CDS |
| AATGAAGTTAAGATACAAAT+CGG | 0.391426 | 1_1:+29666301 | Msa0017760:CDS |
| TTCATCAAGTGTTGCTAAGT+TGG | 0.400076 | 1_1:-29667303 | None:intergenic |
| GGAAATTCTTGAACCGGGCT+TGG | 0.402797 | 1_1:-29666355 | None:intergenic |
| AATGAACACTCCTTCCGGTT+TGG | 0.403905 | 1_1:+29666879 | Msa0017760:CDS |
| GCCCGGTTCAAGAATTTCCT+TGG | 0.409789 | 1_1:+29666359 | Msa0017760:CDS |
| CAGAAAATGAACACTCCTTC+CGG | 0.415455 | 1_1:+29666874 | Msa0017760:CDS |
| GATTTGAAATGGCGTCGTTT+GGG | 0.422850 | 1_1:+29666706 | Msa0017760:CDS |
| AAGATAGCGTCGACATCCTT+AGG | 0.423870 | 1_1:-29664828 | None:intergenic |
| GACAGGAGAATGATTTGAAA+TGG | 0.426454 | 1_1:+29666695 | Msa0017760:intron |
| TATTTATTCCCTTGTTCAAG+TGG | 0.438460 | 1_1:+29667048 | Msa0017760:three_prime_UTR |
| ACACCAACAAAGAGGCCAAC+GGG | 0.464195 | 1_1:-29666523 | None:intergenic |
| AACACTTGATGAAGATTGTA+TGG | 0.465405 | 1_1:+29667313 | Msa0017760:three_prime_UTR |
| GAACACTCCTTCCGGTTTGG+AGG | 0.482482 | 1_1:+29666882 | Msa0017760:CDS |
| ATCCATCTATGCCTCCAAAC+CGG | 0.494534 | 1_1:-29666893 | None:intergenic |
| TCCAAGGAAATTCTTGAACC+GGG | 0.496662 | 1_1:-29666360 | None:intergenic |
| ACATGGTTCGCAACACAACC+AGG | 0.501673 | 1_1:+29666766 | Msa0017760:CDS |
| TTATACGACACTAAGCTTGT+GGG | 0.503274 | 1_1:-29667280 | None:intergenic |
| AGTGGATGAAACAAACTCAA+TGG | 0.513698 | 1_1:+29667066 | Msa0017760:three_prime_UTR |
| CCTCTTTGTTGGTGTCCTTG+TGG | 0.514383 | 1_1:+29666531 | Msa0017760:CDS |
| CACCGATGCTTTAATTGAAG+TGG | 0.515271 | 1_1:-29666260 | None:intergenic |
| TGACGGAGTTGGCATCGAAA+CGG | 0.517136 | 1_1:-29666184 | None:intergenic |
| ACCCGAAACTTGGAAGTTGA+AGG | 0.533653 | 1_1:-29664862 | None:intergenic |
| CAAAGAAGCATTGCCAAGCC+CGG | 0.535706 | 1_1:+29666342 | Msa0017760:CDS |
| GTGGACTGATGCAGTTACTT+TGG | 0.537937 | 1_1:+29666815 | Msa0017760:CDS |
| ATGAAGTTAAGATACAAATC+GGG | 0.545027 | 1_1:+29666302 | Msa0017760:CDS |
| CCACAAGGACACCAACAAAG+AGG | 0.551906 | 1_1:-29666531 | None:intergenic |
| CCGAGCATTTACGGAAATGA+CGG | 0.553717 | 1_1:-29666201 | None:intergenic |
| ATGAACAAGATGATTGAAAG+TGG | 0.558348 | 1_1:-29667013 | None:intergenic |
| TTGTTTCATCCACTTGAACA+AGG | 0.558419 | 1_1:-29667057 | None:intergenic |
| GTTATACGACACTAAGCTTG+TGG | 0.560076 | 1_1:-29667281 | None:intergenic |
| ATTTACGGAAATGACGGAGT+TGG | 0.560264 | 1_1:-29666195 | None:intergenic |
| TGTTTCATCCACTTGAACAA+GGG | 0.563976 | 1_1:-29667056 | None:intergenic |
| TGAAGAACTCGAAGCTCCTA+AGG | 0.565387 | 1_1:+29664812 | Msa0017760:five_prime_UTR |
| CCGTCATTTCCGTAAATGCT+CGG | 0.572387 | 1_1:+29666201 | Msa0017760:CDS |
| TACCACTTCAATTAAAGCAT+CGG | 0.577368 | 1_1:+29666258 | Msa0017760:CDS |
| TTCATGTAACCATAGATTAG+CGG | 0.583962 | 1_1:+29667107 | Msa0017760:three_prime_UTR |
| GACACCAACAAAGAGGCCAA+CGG | 0.588142 | 1_1:-29666524 | None:intergenic |
| ACTACATCTTCTTGTGCAAG+AGG | 0.590723 | 1_1:+29666411 | Msa0017760:CDS |
| AGATGACGTTCATGTCAGCT+TGG | 0.591753 | 1_1:-29666941 | None:intergenic |
| TGGCGTCGTTTGGGCTTGTG+TGG | 0.592958 | 1_1:+29666715 | Msa0017760:CDS |
| CACTTCAATTAAAGCATCGG+TGG | 0.597546 | 1_1:+29666261 | Msa0017760:CDS |
| ATCTATGCCTCCAAACCGGA+AGG | 0.607041 | 1_1:-29666889 | None:intergenic |
| TGGTCAAGTTTATGTCGACA+TGG | 0.610369 | 1_1:+29666749 | Msa0017760:CDS |
| GATACAAATCGGGATCATGA+AGG | 0.613335 | 1_1:+29666312 | Msa0017760:CDS |
| TTGTGCAAGAGGCATTAAAG+TGG | 0.616743 | 1_1:+29666422 | Msa0017760:CDS |
| GTATGTTGAGCATTTCTCCA+AGG | 0.620282 | 1_1:-29666376 | None:intergenic |
| CGAGAATTAATCATTCCCGT+TGG | 0.622166 | 1_1:+29666508 | Msa0017760:CDS |
| TATACGACACTAAGCTTGTG+GGG | 0.634173 | 1_1:-29667279 | None:intergenic |
| CATGGTTCGCAACACAACCA+GGG | 0.638072 | 1_1:+29666767 | Msa0017760:CDS |
| ACATGCAAAAGAAACACCCC+TGG | 0.646921 | 1_1:-29666784 | None:intergenic |
| AGAATTGTTTCATCAATCCG+AGG | 0.652715 | 1_1:+29666579 | Msa0017760:CDS |
| CTTGCACAAGAAGATGTAGT+CGG | 0.655649 | 1_1:-29666408 | None:intergenic |
| CCTTCAAGAAATCAGCCACA+AGG | 0.660555 | 1_1:-29666546 | None:intergenic |
| ATGGTTCGCAACACAACCAG+GGG | 0.671611 | 1_1:+29666768 | Msa0017760:CDS |
| ATGTAACCATAGATTAGCGG+CGG | 0.677000 | 1_1:+29667110 | Msa0017760:three_prime_UTR |
| TAAGCTTGTGGGGAAGATCG+AGG | 0.682021 | 1_1:-29667269 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTAAAATAGTTTTATTAT+TGG | + | chr1_1:29665616-29665635 | Msa0017760:intron | 10.0% |
| !!! | ATATATTTTGTCTTTAAAAA+AGG | + | chr1_1:29665927-29665946 | Msa0017760:intron | 10.0% |
| !!! | AAATAATTTTTGACATGTTT+AGG | + | chr1_1:29665246-29665265 | Msa0017760:intron | 15.0% |
| !!! | AAAACATTTTATAGCTTATA+CGG | + | chr1_1:29665314-29665333 | Msa0017760:intron | 15.0% |
| !!! | TAAAATAGTTTTATTATTGG+TGG | + | chr1_1:29665619-29665638 | Msa0017760:intron | 15.0% |
| !! | ATTATGTTATAACTTTAGAT+AGG | + | chr1_1:29666074-29666093 | Msa0017760:intron | 15.0% |
| !! | TCTCTTAATTGCATTAATTA+AGG | + | chr1_1:29664957-29664976 | Msa0017760:intron | 20.0% |
| !!! | TATTTCTAATCATTCATTTC+TGG | - | chr1_1:29665503-29665522 | None:intergenic | 20.0% |
| !! | TAACATAATTCATAAATTGC+AGG | - | chr1_1:29666063-29666082 | None:intergenic | 20.0% |
| !! | ATTTGTATCTTAACTTCATT+AGG | - | chr1_1:29666301-29666320 | None:intergenic | 20.0% |
| !! | AATGAAGTTAAGATACAAAT+CGG | + | chr1_1:29666301-29666320 | Msa0017760:CDS | 20.0% |
| !! | TGTAATAAAAAAAGGAATTG+TGG | - | chr1_1:29666632-29666651 | None:intergenic | 20.0% |
| !! | TAGTGTGTTAAATGAAAAAA+TGG | - | chr1_1:29667349-29667368 | None:intergenic | 20.0% |
| !! | ATTAAGTTGTTAATCCAAAC+AGG | + | chr1_1:29665409-29665428 | Msa0017760:intron | 25.0% |
| !! | TTAAGTTGTTAATCCAAACA+GGG | + | chr1_1:29665410-29665429 | Msa0017760:intron | 25.0% |
| ! | TCAATTGTTAACAACATCAA+TGG | + | chr1_1:29665644-29665663 | Msa0017760:intron | 25.0% |
| !! | ACTTTTGATAAACCATACAT+AGG | - | chr1_1:29665808-29665827 | None:intergenic | 25.0% |
| ! | TGTTATAACTTTAGATAGGA+TGG | + | chr1_1:29666078-29666097 | Msa0017760:intron | 25.0% |
| ! | TAAATAAACGAACATTGGAA+TGG | - | chr1_1:29666130-29666149 | None:intergenic | 25.0% |
| ! | TGCTATAAATAAACGAACAT+TGG | - | chr1_1:29666135-29666154 | None:intergenic | 25.0% |
| ! | CGAGTATAAAATGTTTGATT+TGG | - | chr1_1:29666238-29666257 | None:intergenic | 25.0% |
| ! | ATGAAGTTAAGATACAAATC+GGG | + | chr1_1:29666302-29666321 | Msa0017760:CDS | 25.0% |
| ! | TAATAATGCAACATATACCT+CGG | - | chr1_1:29666599-29666618 | None:intergenic | 25.0% |
| !!! | TTGGTATTGGAGAAATTTTA+TGG | + | chr1_1:29666834-29666853 | Msa0017760:CDS | 25.0% |
| !!! | ATAAAACACTCTTTTGAAGA+GGG | - | chr1_1:29667239-29667258 | None:intergenic | 25.0% |
| !!! | TATAAAACACTCTTTTGAAG+AGG | - | chr1_1:29667240-29667259 | None:intergenic | 25.0% |
| !!! | TCTTCAAAAGAGTGTTTTAT+AGG | + | chr1_1:29667239-29667258 | Msa0017760:three_prime_UTR | 25.0% |
| !!! | CTTCAAAAGAGTGTTTTATA+GGG | + | chr1_1:29667240-29667259 | Msa0017760:three_prime_UTR | 25.0% |
| !!! | TTCAAAAGAGTGTTTTATAG+GGG | + | chr1_1:29667241-29667260 | Msa0017760:three_prime_UTR | 25.0% |
| ! | CTTATTTCTTTAAGCTCTCA+AGG | + | chr1_1:29665118-29665137 | Msa0017760:intron | 30.0% |
| ! | ATCAATGGAGATGTCTTTTA+CGG | + | chr1_1:29665659-29665678 | Msa0017760:intron | 30.0% |
| ATTTAGCATGATTATCTTCG+TGG | + | chr1_1:29665780-29665799 | Msa0017760:intron | 30.0% | |
| !!! | TGTGTTTTTATTTTGCTCTG+AGG | + | chr1_1:29665829-29665848 | Msa0017760:intron | 30.0% |
| AATCACTTGCACATACAATA+AGG | - | chr1_1:29666024-29666043 | None:intergenic | 30.0% | |
| !! | ATTGTTTGACTTTTGCAATC+TGG | + | chr1_1:29666102-29666121 | Msa0017760:intron | 30.0% |
| ! | TATCTTTCATTCTTTTGTGC+AGG | + | chr1_1:29666156-29666175 | Msa0017760:intron | 30.0% |
| GATAAATTTCCGAGCATTTA+CGG | - | chr1_1:29666213-29666232 | None:intergenic | 30.0% | |
| TACCACTTCAATTAAAGCAT+CGG | + | chr1_1:29666258-29666277 | Msa0017760:CDS | 30.0% | |
| TAACTTCATTAGGCTCATTA+TGG | - | chr1_1:29666291-29666310 | None:intergenic | 30.0% | |
| ! | TATTTTATTGTATCTGCTCG+TGG | + | chr1_1:29666662-29666681 | Msa0017760:intron | 30.0% |
| ! | ATTTTATTGTATCTGCTCGT+GGG | + | chr1_1:29666663-29666682 | Msa0017760:intron | 30.0% |
| ! | TTTCTTTTGCATGTTGCAAA+TGG | + | chr1_1:29666793-29666812 | Msa0017760:CDS | 30.0% |
| ATGAACAAGATGATTGAAAG+TGG | - | chr1_1:29667016-29667035 | None:intergenic | 30.0% | |
| TATTTATTCCCTTGTTCAAG+TGG | + | chr1_1:29667048-29667067 | Msa0017760:three_prime_UTR | 30.0% | |
| TTCATGTAACCATAGATTAG+CGG | + | chr1_1:29667107-29667126 | Msa0017760:three_prime_UTR | 30.0% | |
| !! | TAAAACACTCTTTTGAAGAG+GGG | - | chr1_1:29667238-29667257 | None:intergenic | 30.0% |
| AACACTTGATGAAGATTGTA+TGG | + | chr1_1:29667313-29667332 | Msa0017760:three_prime_UTR | 30.0% | |
| TTCCTTCAACTTCCAAGTTT+CGG | + | chr1_1:29664860-29664879 | Msa0017760:CDS | 35.0% | |
| ACAAAAACATACCCGAAACT+TGG | - | chr1_1:29664875-29664894 | None:intergenic | 35.0% | |
| AGTTGTAAATCCCTTGCATT+AGG | + | chr1_1:29664985-29665004 | Msa0017760:intron | 35.0% | |
| !! | CTTATTTTCATAAGCTCTCG+AGG | + | chr1_1:29665281-29665300 | Msa0017760:intron | 35.0% |
| TAAGCCAGAGTATAACATGT+AGG | + | chr1_1:29665467-29665486 | Msa0017760:intron | 35.0% | |
| CTATCCTACATGTTATACTC+TGG | - | chr1_1:29665474-29665493 | None:intergenic | 35.0% | |
| TATGGTGTAAGAAGTTGCAA+AGG | + | chr1_1:29665589-29665608 | Msa0017760:intron | 35.0% | |
| CAACATAATCCAATTCTAGC+AGG | - | chr1_1:29665688-29665707 | None:intergenic | 35.0% | |
| !! | ACGTGTTTTAAACCCTTTGT+CGG | + | chr1_1:29665721-29665740 | Msa0017760:intron | 35.0% |
| GACATTACATAGTCTGTACT+AGG | - | chr1_1:29665861-29665880 | None:intergenic | 35.0% | |
| TGTGTCATCTTGAAAACACA+TGG | + | chr1_1:29665994-29666013 | Msa0017760:intron | 35.0% | |
| AAGTGATTGCACTAAGTTTC+AGG | + | chr1_1:29666036-29666055 | Msa0017760:intron | 35.0% | |
| AGAATTGTTTCATCAATCCG+AGG | + | chr1_1:29666579-29666598 | Msa0017760:CDS | 35.0% | |
| GACAGGAGAATGATTTGAAA+TGG | + | chr1_1:29666695-29666714 | Msa0017760:intron | 35.0% | |
| ! | TGATGCAGTTACTTTGGTAT+TGG | + | chr1_1:29666821-29666840 | Msa0017760:CDS | 35.0% |
| TGTTTCATCCACTTGAACAA+GGG | - | chr1_1:29667059-29667078 | None:intergenic | 35.0% | |
| TTGTTTCATCCACTTGAACA+AGG | - | chr1_1:29667060-29667079 | None:intergenic | 35.0% | |
| AGTGGATGAAACAAACTCAA+TGG | + | chr1_1:29667066-29667085 | Msa0017760:three_prime_UTR | 35.0% | |
| TTATACGACACTAAGCTTGT+GGG | - | chr1_1:29667283-29667302 | None:intergenic | 35.0% | |
| ! | TTCATCAAGTGTTGCTAAGT+TGG | - | chr1_1:29667306-29667325 | None:intergenic | 35.0% |
| TCCTTCAACTTCCAAGTTTC+GGG | + | chr1_1:29664861-29664880 | Msa0017760:CDS | 40.0% | |
| CAATCAGACACCTAATGCAA+GGG | - | chr1_1:29664998-29665017 | None:intergenic | 40.0% | |
| CATGATATAGAAGCAATCCC+AGG | - | chr1_1:29665445-29665464 | None:intergenic | 40.0% | |
| ! | CACTGAACCGAATGTTTCTA+TGG | + | chr1_1:29665558-29665577 | Msa0017760:intron | 40.0% |
| ! | AACCGAATGTTTCTATGGAG+TGG | + | chr1_1:29665563-29665582 | Msa0017760:intron | 40.0% |
| CACCACTCCATAGAAACATT+CGG | - | chr1_1:29665568-29665587 | None:intergenic | 40.0% | |
| ! | ATTTACGGAAATGACGGAGT+TGG | - | chr1_1:29666198-29666217 | None:intergenic | 40.0% |
| CACCGATGCTTTAATTGAAG+TGG | - | chr1_1:29666263-29666282 | None:intergenic | 40.0% | |
| !! | CACTTCAATTAAAGCATCGG+TGG | + | chr1_1:29666261-29666280 | Msa0017760:CDS | 40.0% |
| GATACAAATCGGGATCATGA+AGG | + | chr1_1:29666312-29666331 | Msa0017760:CDS | 40.0% | |
| TCCAAGGAAATTCTTGAACC+GGG | - | chr1_1:29666363-29666382 | None:intergenic | 40.0% | |
| CTCCAAGGAAATTCTTGAAC+CGG | - | chr1_1:29666364-29666383 | None:intergenic | 40.0% | |
| GTATGTTGAGCATTTCTCCA+AGG | - | chr1_1:29666379-29666398 | None:intergenic | 40.0% | |
| CTTGCACAAGAAGATGTAGT+CGG | - | chr1_1:29666411-29666430 | None:intergenic | 40.0% | |
| ACTACATCTTCTTGTGCAAG+AGG | + | chr1_1:29666411-29666430 | Msa0017760:CDS | 40.0% | |
| !! | TTGTGCAAGAGGCATTAAAG+TGG | + | chr1_1:29666422-29666441 | Msa0017760:CDS | 40.0% |
| CGAGAATTAATCATTCCCGT+TGG | + | chr1_1:29666508-29666527 | Msa0017760:CDS | 40.0% | |
| CAAATCATTCTCCTGTCAAG+TGG | - | chr1_1:29666692-29666711 | None:intergenic | 40.0% | |
| ! | TGATTTGAAATGGCGTCGTT+TGG | + | chr1_1:29666705-29666724 | Msa0017760:CDS | 40.0% |
| ! | GATTTGAAATGGCGTCGTTT+GGG | + | chr1_1:29666706-29666725 | Msa0017760:CDS | 40.0% |
| ! | CTTGTGTGGTATTTTCGTGT+TGG | + | chr1_1:29666729-29666748 | Msa0017760:CDS | 40.0% |
| TGGTCAAGTTTATGTCGACA+TGG | + | chr1_1:29666749-29666768 | Msa0017760:CDS | 40.0% | |
| ! | CTTTTGCATGTTGCAAATGG+TGG | + | chr1_1:29666796-29666815 | Msa0017760:CDS | 40.0% |
| CAGAAAATGAACACTCCTTC+CGG | + | chr1_1:29666874-29666893 | Msa0017760:CDS | 40.0% | |
| ATGTAACCATAGATTAGCGG+CGG | + | chr1_1:29667110-29667129 | Msa0017760:three_prime_UTR | 40.0% | |
| TATACGACACTAAGCTTGTG+GGG | - | chr1_1:29667282-29667301 | None:intergenic | 40.0% | |
| GTTATACGACACTAAGCTTG+TGG | - | chr1_1:29667284-29667303 | None:intergenic | 40.0% | |
| TGAAGAACTCGAAGCTCCTA+AGG | + | chr1_1:29664812-29664831 | Msa0017760:five_prime_UTR | 45.0% | |
| !! | AAGATAGCGTCGACATCCTT+AGG | - | chr1_1:29664831-29664850 | None:intergenic | 45.0% |
| ACCCGAAACTTGGAAGTTGA+AGG | - | chr1_1:29664865-29664884 | None:intergenic | 45.0% | |
| CCAATCAGACACCTAATGCA+AGG | - | chr1_1:29664999-29665018 | None:intergenic | 45.0% | |
| CCTTGCATTAGGTGTCTGAT+TGG | + | chr1_1:29664996-29665015 | Msa0017760:intron | 45.0% | |
| AAACAGGGTCTATGTGTCCT+GGG | + | chr1_1:29665425-29665444 | Msa0017760:intron | 45.0% | |
| ! | CGAATGTTTCTATGGAGTGG+TGG | + | chr1_1:29665566-29665585 | Msa0017760:intron | 45.0% |
| GTTTCTATGGAGTGGTGGTA+TGG | + | chr1_1:29665571-29665590 | Msa0017760:intron | 45.0% | |
| TTACGGTGACCTGCTAGAAT+TGG | + | chr1_1:29665676-29665695 | Msa0017760:intron | 45.0% | |
| ! | ACACATGACTTGCCGACAAA+GGG | - | chr1_1:29665736-29665755 | None:intergenic | 45.0% |
| ! | AACACATGACTTGCCGACAA+AGG | - | chr1_1:29665737-29665756 | None:intergenic | 45.0% |
| GGCAAGTCATGTGTTTGCAA+TGG | + | chr1_1:29665742-29665761 | Msa0017760:intron | 45.0% | |
| ATCTTCGTGGTGCCTATGTA+TGG | + | chr1_1:29665793-29665812 | Msa0017760:intron | 45.0% | |
| CCGAGCATTTACGGAAATGA+CGG | - | chr1_1:29666204-29666223 | None:intergenic | 45.0% | |
| CCGTCATTTCCGTAAATGCT+CGG | + | chr1_1:29666201-29666220 | Msa0017760:CDS | 45.0% | |
| CCTTCAAGAAATCAGCCACA+AGG | - | chr1_1:29666549-29666568 | None:intergenic | 45.0% | |
| ! | CCTTGTGGCTGATTTCTTGA+AGG | + | chr1_1:29666546-29666565 | Msa0017760:CDS | 45.0% |
| ACATGCAAAAGAAACACCCC+TGG | - | chr1_1:29666787-29666806 | None:intergenic | 45.0% | |
| ! | GTGGACTGATGCAGTTACTT+TGG | + | chr1_1:29666815-29666834 | Msa0017760:CDS | 45.0% |
| AATGAACACTCCTTCCGGTT+TGG | + | chr1_1:29666879-29666898 | Msa0017760:CDS | 45.0% | |
| ATCCATCTATGCCTCCAAAC+CGG | - | chr1_1:29666896-29666915 | None:intergenic | 45.0% | |
| AGATGACGTTCATGTCAGCT+TGG | - | chr1_1:29666944-29666963 | None:intergenic | 45.0% | |
| !! | ATTAATAATGTAATAAAAAA+AGG | - | chr1_1:29666640-29666659 | None:intergenic | 5.0% |
| CAGGACACATAGACCCTGTT+TGG | - | chr1_1:29665426-29665445 | None:intergenic | 50.0% | |
| CAAACAGGGTCTATGTGTCC+TGG | + | chr1_1:29665424-29665443 | Msa0017760:intron | 50.0% | |
| ! | TGACGGAGTTGGCATCGAAA+CGG | - | chr1_1:29666187-29666206 | None:intergenic | 50.0% |
| !! | CAAAGAAGCATTGCCAAGCC+CGG | + | chr1_1:29666342-29666361 | Msa0017760:CDS | 50.0% |
| GGAAATTCTTGAACCGGGCT+TGG | - | chr1_1:29666358-29666377 | None:intergenic | 50.0% | |
| GCCCGGTTCAAGAATTTCCT+TGG | + | chr1_1:29666359-29666378 | Msa0017760:CDS | 50.0% | |
| ! | ATTCCCGTTGGCCTCTTTGT+TGG | + | chr1_1:29666520-29666539 | Msa0017760:CDS | 50.0% |
| ACACCAACAAAGAGGCCAAC+GGG | - | chr1_1:29666526-29666545 | None:intergenic | 50.0% | |
| GACACCAACAAAGAGGCCAA+CGG | - | chr1_1:29666527-29666546 | None:intergenic | 50.0% | |
| CCACAAGGACACCAACAAAG+AGG | - | chr1_1:29666534-29666553 | None:intergenic | 50.0% | |
| ! | CCTCTTTGTTGGTGTCCTTG+TGG | + | chr1_1:29666531-29666550 | Msa0017760:CDS | 50.0% |
| ACATGGTTCGCAACACAACC+AGG | + | chr1_1:29666766-29666785 | Msa0017760:CDS | 50.0% | |
| CATGGTTCGCAACACAACCA+GGG | + | chr1_1:29666767-29666786 | Msa0017760:CDS | 50.0% | |
| ATGGTTCGCAACACAACCAG+GGG | + | chr1_1:29666768-29666787 | Msa0017760:CDS | 50.0% | |
| ATCTATGCCTCCAAACCGGA+AGG | - | chr1_1:29666892-29666911 | None:intergenic | 50.0% | |
| !! | TTCCGGTTTGGAGGCATAGA+TGG | + | chr1_1:29666891-29666910 | Msa0017760:exon | 50.0% |
| CATATGCCGCCGCTAATCTA+TGG | - | chr1_1:29667119-29667138 | None:intergenic | 50.0% | |
| TAAGCTTGTGGGGAAGATCG+AGG | - | chr1_1:29667272-29667291 | None:intergenic | 50.0% | |
| !! | GAACACTCCTTCCGGTTTGG+AGG | + | chr1_1:29666882-29666901 | Msa0017760:CDS | 55.0% |
| TGGCGTCGTTTGGGCTTGTG+TGG | + | chr1_1:29666715-29666734 | Msa0017760:CDS | 60.0% | |
| ! | CTCGTGGGCTGCCACTTGAC+AGG | + | chr1_1:29666678-29666697 | Msa0017760:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 29664790 | 29667372 | 29664790 | ID=Msa0017760;Name=Msa0017760 |
| chr1_1 | mRNA | 29664790 | 29667372 | 29664790 | ID=Msa0017760-mRNA-1;Parent=Msa0017760;Name=Msa0017760-mRNA-1;_AED=0.04;_eAED=0.04;_QI=45|1|1|1|1|1|3|463|226 |
| chr1_1 | exon | 29664790 | 29664882 | 29664790 | ID=Msa0017760-mRNA-1:exon:9871;Parent=Msa0017760-mRNA-1 |
| chr1_1 | exon | 29666178 | 29666600 | 29666178 | ID=Msa0017760-mRNA-1:exon:9872;Parent=Msa0017760-mRNA-1 |
| chr1_1 | exon | 29666700 | 29667372 | 29666700 | ID=Msa0017760-mRNA-1:exon:9873;Parent=Msa0017760-mRNA-1 |
| chr1_1 | five_prime_UTR | 29664790 | 29664834 | 29664790 | ID=Msa0017760-mRNA-1:five_prime_utr;Parent=Msa0017760-mRNA-1 |
| chr1_1 | CDS | 29664835 | 29664882 | 29664835 | ID=Msa0017760-mRNA-1:cds;Parent=Msa0017760-mRNA-1 |
| chr1_1 | CDS | 29666178 | 29666600 | 29666178 | ID=Msa0017760-mRNA-1:cds;Parent=Msa0017760-mRNA-1 |
| chr1_1 | CDS | 29666700 | 29666909 | 29666700 | ID=Msa0017760-mRNA-1:cds;Parent=Msa0017760-mRNA-1 |
| chr1_1 | three_prime_UTR | 29666910 | 29667372 | 29666910 | ID=Msa0017760-mRNA-1:three_prime_utr;Parent=Msa0017760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
